data_3OE0 # _entry.id 3OE0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OE0 pdb_00003oe0 10.2210/pdb3oe0/pdb RCSB RCSB060996 ? ? WWPDB D_1000060996 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB ATCG3D_11 . unspecified PDB 3ODU 'same protein at 2.5 A in P21 spacegroup' unspecified PDB 3OE6 'same protein in I222 spacegroup' unspecified PDB 3OE8 'same protein in P1 spacegroup with 3 molecules per asymmetric unit' unspecified PDB 3OE9 'same protein in P1 spacegroup with 2 molecules per asymmetric unit' unspecified TargetTrack GPCR-34 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OE0 _pdbx_database_status.recvd_initial_deposition_date 2010-08-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, B.' 1 'Mol, C.D.' 2 'Han, G.W.' 3 'Katritch, V.' 4 'Chien, E.Y.T.' 5 'Liu, W.' 6 'Cherezov, V.' 7 'Stevens, R.C.' 8 'Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)' 9 'GPCR Network (GPCR)' 10 # _citation.id primary _citation.title 'Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.' _citation.journal_abbrev Science _citation.journal_volume 330 _citation.page_first 1066 _citation.page_last 1071 _citation.year 2010 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20929726 _citation.pdbx_database_id_DOI 10.1126/science.1194396 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, B.' 1 ? primary 'Chien, E.Y.' 2 ? primary 'Mol, C.D.' 3 ? primary 'Fenalti, G.' 4 ? primary 'Liu, W.' 5 ? primary 'Katritch, V.' 6 ? primary 'Abagyan, R.' 7 ? primary 'Brooun, A.' 8 ? primary 'Wells, P.' 9 ? primary 'Bi, F.C.' 10 ? primary 'Hamel, D.J.' 11 ? primary 'Kuhn, P.' 12 ? primary 'Handel, T.M.' 13 ? primary 'Cherezov, V.' 14 ? primary 'Stevens, R.C.' 15 ? # _cell.entry_id 3OE0 _cell.length_a 82.080 _cell.length_b 144.860 _cell.length_c 73.990 _cell.angle_alpha 90.00 _cell.angle_beta 104.54 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OE0 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-X-C chemokine receptor type 4, Lysozyme Chimera' 56685.508 1 3.2.1.17 'L125W, T240P, C1054T, C1097T' 'CXCR4 residues 2-228, LYSOZYME residues 1002-1161, CXCR4 residues 231-319' ? 2 polymer syn 'Polyphemusin analog, CXC chemokine receptor antagonist' 2139.532 1 ? ? ? 'cyclic peptide CVX15' 3 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;CXC-R4, CXCR-4, Stromal cell-derived factor 1 receptor, SDF-1 receptor, Fusin, Leukocyte-derived seven transmembrane domain receptor, LESTR, LCR1, FB22, NPYRL, HM89, Lysis protein, Muramidase, Endolysin ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DYKDDDDAGAPEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLR SMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKL LAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHNI FEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAK LKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYSG SGHQKRKALKPTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKF KTSAQHALTSGRPLEVLFQ ; ;DYKDDDDAGAPEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLR SMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKL LAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHNI FEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAK LKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYSG SGHQKRKALKPTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKF KTSAQHALTSGRPLEVLFQ ; A 'GPCR-34, ATCG3D_11' 2 'polypeptide(L)' no yes 'RR(ALN)CYQK(DPR)PYR(CIR)CRG(DPR)' RRACYQKPPYRRCRGP I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 TYR n 1 3 LYS n 1 4 ASP n 1 5 ASP n 1 6 ASP n 1 7 ASP n 1 8 ALA n 1 9 GLY n 1 10 ALA n 1 11 PRO n 1 12 GLU n 1 13 GLY n 1 14 ILE n 1 15 SER n 1 16 ILE n 1 17 TYR n 1 18 THR n 1 19 SER n 1 20 ASP n 1 21 ASN n 1 22 TYR n 1 23 THR n 1 24 GLU n 1 25 GLU n 1 26 MET n 1 27 GLY n 1 28 SER n 1 29 GLY n 1 30 ASP n 1 31 TYR n 1 32 ASP n 1 33 SER n 1 34 MET n 1 35 LYS n 1 36 GLU n 1 37 PRO n 1 38 CYS n 1 39 PHE n 1 40 ARG n 1 41 GLU n 1 42 GLU n 1 43 ASN n 1 44 ALA n 1 45 ASN n 1 46 PHE n 1 47 ASN n 1 48 LYS n 1 49 ILE n 1 50 PHE n 1 51 LEU n 1 52 PRO n 1 53 THR n 1 54 ILE n 1 55 TYR n 1 56 SER n 1 57 ILE n 1 58 ILE n 1 59 PHE n 1 60 LEU n 1 61 THR n 1 62 GLY n 1 63 ILE n 1 64 VAL n 1 65 GLY n 1 66 ASN n 1 67 GLY n 1 68 LEU n 1 69 VAL n 1 70 ILE n 1 71 LEU n 1 72 VAL n 1 73 MET n 1 74 GLY n 1 75 TYR n 1 76 GLN n 1 77 LYS n 1 78 LYS n 1 79 LEU n 1 80 ARG n 1 81 SER n 1 82 MET n 1 83 THR n 1 84 ASP n 1 85 LYS n 1 86 TYR n 1 87 ARG n 1 88 LEU n 1 89 HIS n 1 90 LEU n 1 91 SER n 1 92 VAL n 1 93 ALA n 1 94 ASP n 1 95 LEU n 1 96 LEU n 1 97 PHE n 1 98 VAL n 1 99 ILE n 1 100 THR n 1 101 LEU n 1 102 PRO n 1 103 PHE n 1 104 TRP n 1 105 ALA n 1 106 VAL n 1 107 ASP n 1 108 ALA n 1 109 VAL n 1 110 ALA n 1 111 ASN n 1 112 TRP n 1 113 TYR n 1 114 PHE n 1 115 GLY n 1 116 ASN n 1 117 PHE n 1 118 LEU n 1 119 CYS n 1 120 LYS n 1 121 ALA n 1 122 VAL n 1 123 HIS n 1 124 VAL n 1 125 ILE n 1 126 TYR n 1 127 THR n 1 128 VAL n 1 129 ASN n 1 130 LEU n 1 131 TYR n 1 132 SER n 1 133 SER n 1 134 VAL n 1 135 TRP n 1 136 ILE n 1 137 LEU n 1 138 ALA n 1 139 PHE n 1 140 ILE n 1 141 SER n 1 142 LEU n 1 143 ASP n 1 144 ARG n 1 145 TYR n 1 146 LEU n 1 147 ALA n 1 148 ILE n 1 149 VAL n 1 150 HIS n 1 151 ALA n 1 152 THR n 1 153 ASN n 1 154 SER n 1 155 GLN n 1 156 ARG n 1 157 PRO n 1 158 ARG n 1 159 LYS n 1 160 LEU n 1 161 LEU n 1 162 ALA n 1 163 GLU n 1 164 LYS n 1 165 VAL n 1 166 VAL n 1 167 TYR n 1 168 VAL n 1 169 GLY n 1 170 VAL n 1 171 TRP n 1 172 ILE n 1 173 PRO n 1 174 ALA n 1 175 LEU n 1 176 LEU n 1 177 LEU n 1 178 THR n 1 179 ILE n 1 180 PRO n 1 181 ASP n 1 182 PHE n 1 183 ILE n 1 184 PHE n 1 185 ALA n 1 186 ASN n 1 187 VAL n 1 188 SER n 1 189 GLU n 1 190 ALA n 1 191 ASP n 1 192 ASP n 1 193 ARG n 1 194 TYR n 1 195 ILE n 1 196 CYS n 1 197 ASP n 1 198 ARG n 1 199 PHE n 1 200 TYR n 1 201 PRO n 1 202 ASN n 1 203 ASP n 1 204 LEU n 1 205 TRP n 1 206 VAL n 1 207 VAL n 1 208 VAL n 1 209 PHE n 1 210 GLN n 1 211 PHE n 1 212 GLN n 1 213 HIS n 1 214 ILE n 1 215 MET n 1 216 VAL n 1 217 GLY n 1 218 LEU n 1 219 ILE n 1 220 LEU n 1 221 PRO n 1 222 GLY n 1 223 ILE n 1 224 VAL n 1 225 ILE n 1 226 LEU n 1 227 SER n 1 228 CYS n 1 229 TYR n 1 230 CYS n 1 231 ILE n 1 232 ILE n 1 233 ILE n 1 234 SER n 1 235 LYS n 1 236 LEU n 1 237 SER n 1 238 HIS n 1 239 ASN n 1 240 ILE n 1 241 PHE n 1 242 GLU n 1 243 MET n 1 244 LEU n 1 245 ARG n 1 246 ILE n 1 247 ASP n 1 248 GLU n 1 249 GLY n 1 250 LEU n 1 251 ARG n 1 252 LEU n 1 253 LYS n 1 254 ILE n 1 255 TYR n 1 256 LYS n 1 257 ASP n 1 258 THR n 1 259 GLU n 1 260 GLY n 1 261 TYR n 1 262 TYR n 1 263 THR n 1 264 ILE n 1 265 GLY n 1 266 ILE n 1 267 GLY n 1 268 HIS n 1 269 LEU n 1 270 LEU n 1 271 THR n 1 272 LYS n 1 273 SER n 1 274 PRO n 1 275 SER n 1 276 LEU n 1 277 ASN n 1 278 ALA n 1 279 ALA n 1 280 LYS n 1 281 SER n 1 282 GLU n 1 283 LEU n 1 284 ASP n 1 285 LYS n 1 286 ALA n 1 287 ILE n 1 288 GLY n 1 289 ARG n 1 290 ASN n 1 291 THR n 1 292 ASN n 1 293 GLY n 1 294 VAL n 1 295 ILE n 1 296 THR n 1 297 LYS n 1 298 ASP n 1 299 GLU n 1 300 ALA n 1 301 GLU n 1 302 LYS n 1 303 LEU n 1 304 PHE n 1 305 ASN n 1 306 GLN n 1 307 ASP n 1 308 VAL n 1 309 ASP n 1 310 ALA n 1 311 ALA n 1 312 VAL n 1 313 ARG n 1 314 GLY n 1 315 ILE n 1 316 LEU n 1 317 ARG n 1 318 ASN n 1 319 ALA n 1 320 LYS n 1 321 LEU n 1 322 LYS n 1 323 PRO n 1 324 VAL n 1 325 TYR n 1 326 ASP n 1 327 SER n 1 328 LEU n 1 329 ASP n 1 330 ALA n 1 331 VAL n 1 332 ARG n 1 333 ARG n 1 334 ALA n 1 335 ALA n 1 336 LEU n 1 337 ILE n 1 338 ASN n 1 339 MET n 1 340 VAL n 1 341 PHE n 1 342 GLN n 1 343 MET n 1 344 GLY n 1 345 GLU n 1 346 THR n 1 347 GLY n 1 348 VAL n 1 349 ALA n 1 350 GLY n 1 351 PHE n 1 352 THR n 1 353 ASN n 1 354 SER n 1 355 LEU n 1 356 ARG n 1 357 MET n 1 358 LEU n 1 359 GLN n 1 360 GLN n 1 361 LYS n 1 362 ARG n 1 363 TRP n 1 364 ASP n 1 365 GLU n 1 366 ALA n 1 367 ALA n 1 368 VAL n 1 369 ASN n 1 370 LEU n 1 371 ALA n 1 372 LYS n 1 373 SER n 1 374 ARG n 1 375 TRP n 1 376 TYR n 1 377 ASN n 1 378 GLN n 1 379 THR n 1 380 PRO n 1 381 ASN n 1 382 ARG n 1 383 ALA n 1 384 LYS n 1 385 ARG n 1 386 VAL n 1 387 ILE n 1 388 THR n 1 389 THR n 1 390 PHE n 1 391 ARG n 1 392 THR n 1 393 GLY n 1 394 THR n 1 395 TRP n 1 396 ASP n 1 397 ALA n 1 398 TYR n 1 399 SER n 1 400 GLY n 1 401 SER n 1 402 GLY n 1 403 HIS n 1 404 GLN n 1 405 LYS n 1 406 ARG n 1 407 LYS n 1 408 ALA n 1 409 LEU n 1 410 LYS n 1 411 PRO n 1 412 THR n 1 413 VAL n 1 414 ILE n 1 415 LEU n 1 416 ILE n 1 417 LEU n 1 418 ALA n 1 419 PHE n 1 420 PHE n 1 421 ALA n 1 422 CYS n 1 423 TRP n 1 424 LEU n 1 425 PRO n 1 426 TYR n 1 427 TYR n 1 428 ILE n 1 429 GLY n 1 430 ILE n 1 431 SER n 1 432 ILE n 1 433 ASP n 1 434 SER n 1 435 PHE n 1 436 ILE n 1 437 LEU n 1 438 LEU n 1 439 GLU n 1 440 ILE n 1 441 ILE n 1 442 LYS n 1 443 GLN n 1 444 GLY n 1 445 CYS n 1 446 GLU n 1 447 PHE n 1 448 GLU n 1 449 ASN n 1 450 THR n 1 451 VAL n 1 452 HIS n 1 453 LYS n 1 454 TRP n 1 455 ILE n 1 456 SER n 1 457 ILE n 1 458 THR n 1 459 GLU n 1 460 ALA n 1 461 LEU n 1 462 ALA n 1 463 PHE n 1 464 PHE n 1 465 HIS n 1 466 CYS n 1 467 CYS n 1 468 LEU n 1 469 ASN n 1 470 PRO n 1 471 ILE n 1 472 LEU n 1 473 TYR n 1 474 ALA n 1 475 PHE n 1 476 LEU n 1 477 GLY n 1 478 ALA n 1 479 LYS n 1 480 PHE n 1 481 LYS n 1 482 THR n 1 483 SER n 1 484 ALA n 1 485 GLN n 1 486 HIS n 1 487 ALA n 1 488 LEU n 1 489 THR n 1 490 SER n 1 491 GLY n 1 492 ARG n 1 493 PRO n 1 494 LEU n 1 495 GLU n 1 496 VAL n 1 497 LEU n 1 498 PHE n 1 499 GLN n 2 1 ARG n 2 2 ARG n 2 3 ALN n 2 4 CYS n 2 5 TYR n 2 6 GLN n 2 7 LYS n 2 8 DPR n 2 9 PRO n 2 10 TYR n 2 11 ARG n 2 12 CIR n 2 13 CYS n 2 14 ARG n 2 15 GLY n 2 16 DPR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 12 238 ? ? 'CXCR4, CXCR4_HUMAN, E' ? ? ? ? ? ? 'Homo Sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? Sf9 ? ? ? ? ? ? ? BACMID ? ? ? pFastBac ? ? 1 3 sample ? 402 490 ? ? 'CXCR4, CXCR4_HUMAN, E' ? ? ? ? ? ? 'Homo Sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? Sf9 ? ? ? ? ? ? ? BACMID ? ? ? pFastBac ? ? 1 2 sample ? 239 398 ? ? 'CXCR4, CXCR4_HUMAN, E' ? ? ? ? ? ? 'Enterobacteria phage T4' 10665 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? Sf9 ? ? ? ? ? ? ? BACMID ? ? ? pFastBac ? ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthetic analog and derivative of polyphemusin from Limulus polyphemus (horseshoe crab)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CXCR4_HUMAN P61073 1 ;EGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLS VADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVW IPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSH ; 2 ? 2 UNP LYS_BPT4 P00720 1 ;NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRN AKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY ; 1002 ? 3 UNP CXCR4_HUMAN P61073 1 ;GHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFK TSAQHALTS ; 231 ? 4 PDB 3OE0 3OE0 2 RRACYQKXPYRRCRGX 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OE0 A 12 ? 238 ? P61073 2 ? 228 ? 2 228 2 2 3OE0 A 239 ? 398 ? P00720 1002 ? 1161 ? 1002 1161 3 3 3OE0 A 402 ? 490 ? P61073 231 ? 319 ? 231 319 4 4 3OE0 I 1 ? 16 ? 3OE0 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OE0 ASP A 1 ? UNP P61073 ? ? 'expression tag' -9 1 1 3OE0 TYR A 2 ? UNP P61073 ? ? 'expression tag' -8 2 1 3OE0 LYS A 3 ? UNP P61073 ? ? 'expression tag' -7 3 1 3OE0 ASP A 4 ? UNP P61073 ? ? 'expression tag' -6 4 1 3OE0 ASP A 5 ? UNP P61073 ? ? 'expression tag' -5 5 1 3OE0 ASP A 6 ? UNP P61073 ? ? 'expression tag' -4 6 1 3OE0 ASP A 7 ? UNP P61073 ? ? 'expression tag' -3 7 1 3OE0 ALA A 8 ? UNP P61073 ? ? 'expression tag' -2 8 1 3OE0 GLY A 9 ? UNP P61073 ? ? 'expression tag' -1 9 1 3OE0 ALA A 10 ? UNP P61073 ? ? 'expression tag' 0 10 1 3OE0 PRO A 11 ? UNP P61073 ? ? 'expression tag' 1 11 1 3OE0 TRP A 135 ? UNP P61073 LEU 125 'engineered mutation' 125 12 2 3OE0 THR A 291 ? UNP P00720 CYS 1054 'engineered mutation' 1054 13 2 3OE0 ALA A 334 ? UNP P00720 CYS 1097 'engineered mutation' 1097 14 3 3OE0 SER A 399 ? UNP P61073 ? ? linker 1200 15 3 3OE0 GLY A 400 ? UNP P61073 ? ? linker 1201 16 3 3OE0 SER A 401 ? UNP P61073 ? ? linker 1202 17 3 3OE0 PRO A 411 ? UNP P61073 THR 240 'engineered mutation' 240 18 3 3OE0 GLY A 491 ? UNP P61073 ? ? 'expression tag' 320 19 3 3OE0 ARG A 492 ? UNP P61073 ? ? 'expression tag' 321 20 3 3OE0 PRO A 493 ? UNP P61073 ? ? 'expression tag' 322 21 3 3OE0 LEU A 494 ? UNP P61073 ? ? 'expression tag' 323 22 3 3OE0 GLU A 495 ? UNP P61073 ? ? 'expression tag' 324 23 3 3OE0 VAL A 496 ? UNP P61073 ? ? 'expression tag' 325 24 3 3OE0 LEU A 497 ? UNP P61073 ? ? 'expression tag' 326 25 3 3OE0 PHE A 498 ? UNP P61073 ? ? 'expression tag' 327 26 3 3OE0 GLN A 499 ? UNP P61073 ? ? 'expression tag' 328 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALN 'L-peptide linking' n NAPHTHALEN-2-YL-3-ALANINE ? 'C13 H13 N O2' 215.248 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIR 'L-peptide linking' n CITRULLINE ? 'C6 H13 N3 O3' 175.186 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OE0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 14 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.62 _exptl_crystal.density_percent_sol 66.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;Lipidic cubic phase made of monoolein and cholesterol, 25% PEG400, 0.3M Potassium sodium tartrate, 0.1 M Tris pH 7.0, LIPIDIC CUBIC PHASE, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2010-06-12 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0330 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0330 # _reflns.entry_id 3OE0 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.90 _reflns.number_obs 17656 _reflns.number_all ? _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.00 _reflns_shell.percent_possible_all 73.6 _reflns_shell.Rmerge_I_obs 0.63 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3OE0 _refine.ls_number_reflns_obs 16707 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.93 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 95.24 _refine.ls_R_factor_obs 0.21732 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21463 _refine.ls_R_factor_R_free 0.26699 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 898 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.B_iso_mean 57.050 _refine.aniso_B[1][1] 0.10 _refine.aniso_B[2][2] -0.41 _refine.aniso_B[3][3] 0.41 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.20 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.839 _refine.pdbx_overall_ESU_R_Free 0.374 _refine.overall_SU_ML 0.309 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 34.246 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3634 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 3640 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 19.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.022 ? 3728 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2530 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.101 1.956 ? 5053 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.855 3.000 ? 6125 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.801 5.000 ? 441 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.366 22.840 ? 162 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.646 15.000 ? 625 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.924 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.060 0.200 ? 572 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 4046 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 822 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.385 1.500 ? 2232 'X-RAY DIFFRACTION' ? r_mcbond_other 0.045 1.500 ? 901 'X-RAY DIFFRACTION' ? r_mcangle_it 0.733 2.000 ? 3608 'X-RAY DIFFRACTION' ? r_scbond_it 0.802 3.000 ? 1496 'X-RAY DIFFRACTION' ? r_scangle_it 1.419 4.500 ? 1445 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.902 _refine_ls_shell.d_res_low 2.975 _refine_ls_shell.number_reflns_R_work 961 _refine_ls_shell.R_factor_R_work 0.340 _refine_ls_shell.percent_reflns_obs 73.60 _refine_ls_shell.R_factor_R_free 0.397 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3OE0 _struct.title 'Crystal structure of the CXCR4 chemokine receptor in complex with a cyclic peptide antagonist CVX15' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OE0 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN, HYDROLASE/ANTIBIOTIC' _struct_keywords.text ;Structural Genomics, PSI-2, Protein Structure Initiative, Accelerated Technologies Center for Gene to 3D Structure, ATCG3D, 7TM, G protein-coupled receptor, GPCR, Signal transduction, Hydrolase, Cancer, HIV-1 co-receptor, chemokine, CXCL12, Chimera, T4L fusion, Membrane protein, Transmembrane, antimicrobial, antibiotic, polyphemusin, SIGNALING PROTEIN, HYDROLASE-ANTIBIOTIC complex, PSI-Biology, GPCR Network ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 43 ? ILE A 49 ? ASN A 33 ILE A 39 1 ? 7 HELX_P HELX_P2 2 ILE A 49 ? MET A 73 ? ILE A 39 MET A 63 1 ? 25 HELX_P HELX_P3 3 SER A 81 ? ILE A 99 ? SER A 71 ILE A 89 1 ? 19 HELX_P HELX_P4 4 THR A 100 ? ALA A 110 ? THR A 90 ALA A 100 1 ? 11 HELX_P HELX_P5 5 PHE A 114 ? HIS A 150 ? PHE A 104 HIS A 140 1 ? 37 HELX_P HELX_P6 6 ALA A 151 ? ASN A 153 ? ALA A 141 ASN A 143 5 ? 3 HELX_P HELX_P7 7 SER A 154 ? LYS A 164 ? SER A 144 LYS A 154 1 ? 11 HELX_P HELX_P8 8 LYS A 164 ? VAL A 170 ? LYS A 154 VAL A 160 1 ? 7 HELX_P HELX_P9 9 VAL A 170 ? THR A 178 ? VAL A 160 THR A 168 1 ? 9 HELX_P HELX_P10 10 THR A 178 ? PHE A 184 ? THR A 168 PHE A 174 1 ? 7 HELX_P HELX_P11 11 ASN A 202 ? LEU A 218 ? ASN A 192 LEU A 208 1 ? 17 HELX_P HELX_P12 12 LEU A 218 ? GLU A 248 ? LEU A 208 GLU A 1011 1 ? 31 HELX_P HELX_P13 13 SER A 275 ? GLY A 288 ? SER A 1038 GLY A 1051 1 ? 14 HELX_P HELX_P14 14 THR A 296 ? ARG A 317 ? THR A 1059 ARG A 1080 1 ? 22 HELX_P HELX_P15 15 LYS A 320 ? LEU A 328 ? LYS A 1083 LEU A 1091 1 ? 9 HELX_P HELX_P16 16 ASP A 329 ? GLY A 350 ? ASP A 1092 GLY A 1113 1 ? 22 HELX_P HELX_P17 17 PHE A 351 ? GLN A 360 ? PHE A 1114 GLN A 1123 1 ? 10 HELX_P HELX_P18 18 ARG A 362 ? LYS A 372 ? ARG A 1125 LYS A 1135 1 ? 11 HELX_P HELX_P19 19 SER A 373 ? THR A 379 ? SER A 1136 THR A 1142 1 ? 7 HELX_P HELX_P20 20 THR A 379 ? GLY A 393 ? THR A 1142 GLY A 1156 1 ? 15 HELX_P HELX_P21 21 LEU A 409 ? LEU A 438 ? LEU A 238 LEU A 267 1 ? 30 HELX_P HELX_P22 22 GLN A 443 ? PHE A 463 ? GLN A 272 PHE A 292 1 ? 21 HELX_P HELX_P23 23 PHE A 464 ? TYR A 473 ? PHE A 293 TYR A 302 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 445 SG ? ? A CYS 28 A CYS 274 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf2 disulf ? ? A CYS 119 SG ? ? ? 1_555 A CYS 196 SG ? ? A CYS 109 A CYS 186 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf3 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 13 SG ? ? I CYS 4 I CYS 13 1_555 ? ? ? ? ? ? ? 2.056 sing ? covale1 covale both ? A HIS 238 C ? ? ? 1_555 A ASN 239 N ? ? A HIS 228 A ASN 1002 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? B ARG 2 C ? ? ? 1_555 B ALN 3 N ? ? I ARG 2 I ALN 3 1_555 ? ? ? ? ? ? ? 1.338 sing ? covale3 covale both ? B ALN 3 C ? ? ? 1_555 B CYS 4 N ? ? I ALN 3 I CYS 4 1_555 ? ? ? ? ? ? ? 1.331 sing ? covale4 covale both ? B LYS 7 C ? ? ? 1_555 B DPR 8 N ? ? I LYS 7 I DPR 8 1_555 ? ? ? ? ? ? ? 1.352 sing ? covale5 covale both ? B DPR 8 C ? ? ? 1_555 B PRO 9 N ? ? I DPR 8 I PRO 9 1_555 ? ? ? ? ? ? ? 1.344 sing ? covale6 covale both ? B ARG 11 C ? ? ? 1_555 B CIR 12 N ? ? I ARG 11 I CIR 12 1_555 ? ? ? ? ? ? ? 1.336 sing ? covale7 covale both ? B CIR 12 C ? ? ? 1_555 B CYS 13 N ? ? I CIR 12 I CYS 13 1_555 ? ? ? ? ? ? ? 1.327 sing ? covale8 covale both ? B GLY 15 C ? ? ? 1_555 B DPR 16 N ? ? I GLY 15 I DPR 16 1_555 ? ? ? ? ? ? ? 1.337 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 185 ? GLU A 189 ? ALA A 175 GLU A 179 A 2 TYR A 194 ? TYR A 200 ? TYR A 184 TYR A 190 A 3 CYS B 4 ? TYR B 5 ? CYS I 4 TYR I 5 B 1 LEU A 250 ? LYS A 256 ? LEU A 1013 LYS A 1019 B 2 TYR A 262 ? ILE A 266 ? TYR A 1025 ILE A 1029 B 3 HIS A 268 ? THR A 271 ? HIS A 1031 THR A 1034 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 188 ? N SER A 178 O ILE A 195 ? O ILE A 185 A 2 3 N ARG A 198 ? N ARG A 188 O CYS B 4 ? O CYS I 4 B 1 2 N ARG A 251 ? N ARG A 1014 O GLY A 265 ? O GLY A 1028 B 2 3 N TYR A 262 ? N TYR A 1025 O LEU A 270 ? O LEU A 1033 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 23 _struct_site.details 'BINDING SITE FOR CHAIN I OF POLYPHEMUSIN ANALOG, CXC CHEMOKINE RECEPTOR ANTAGONIST' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 HIS A 123 ? HIS A 113 . ? 1_555 ? 2 AC1 23 TYR A 126 ? TYR A 116 . ? 1_555 ? 3 AC1 23 THR A 127 ? THR A 117 . ? 1_555 ? 4 AC1 23 ASP A 181 ? ASP A 171 . ? 1_555 ? 5 AC1 23 ASP A 197 ? ASP A 187 . ? 1_555 ? 6 AC1 23 ARG A 198 ? ARG A 188 . ? 1_555 ? 7 AC1 23 PHE A 199 ? PHE A 189 . ? 1_555 ? 8 AC1 23 TYR A 200 ? TYR A 190 . ? 1_555 ? 9 AC1 23 PRO A 201 ? PRO A 191 . ? 1_555 ? 10 AC1 23 ASP A 203 ? ASP A 193 . ? 1_555 ? 11 AC1 23 VAL A 206 ? VAL A 196 . ? 1_555 ? 12 AC1 23 PHE A 209 ? PHE A 199 . ? 1_555 ? 13 AC1 23 GLN A 210 ? GLN A 200 . ? 1_555 ? 14 AC1 23 ASP A 433 ? ASP A 262 . ? 1_555 ? 15 AC1 23 LEU A 437 ? LEU A 266 . ? 1_555 ? 16 AC1 23 GLU A 448 ? GLU A 277 . ? 1_555 ? 17 AC1 23 HIS A 452 ? HIS A 281 . ? 1_555 ? 18 AC1 23 ILE A 455 ? ILE A 284 . ? 1_555 ? 19 AC1 23 SER A 456 ? SER A 285 . ? 1_555 ? 20 AC1 23 GLU A 459 ? GLU A 288 . ? 1_555 ? 21 AC1 23 HOH D . ? HOH I 1601 . ? 1_555 ? 22 AC1 23 HOH D . ? HOH I 1602 . ? 1_555 ? 23 AC1 23 HOH D . ? HOH I 1604 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OE0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OE0 _atom_sites.fract_transf_matrix[1][1] 0.012183 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003160 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006903 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013963 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 -9 ? ? ? A . n A 1 2 TYR 2 -8 ? ? ? A . n A 1 3 LYS 3 -7 ? ? ? A . n A 1 4 ASP 4 -6 ? ? ? A . n A 1 5 ASP 5 -5 ? ? ? A . n A 1 6 ASP 6 -4 ? ? ? A . n A 1 7 ASP 7 -3 ? ? ? A . n A 1 8 ALA 8 -2 ? ? ? A . n A 1 9 GLY 9 -1 ? ? ? A . n A 1 10 ALA 10 0 ? ? ? A . n A 1 11 PRO 11 1 ? ? ? A . n A 1 12 GLU 12 2 ? ? ? A . n A 1 13 GLY 13 3 ? ? ? A . n A 1 14 ILE 14 4 ? ? ? A . n A 1 15 SER 15 5 ? ? ? A . n A 1 16 ILE 16 6 ? ? ? A . n A 1 17 TYR 17 7 ? ? ? A . n A 1 18 THR 18 8 ? ? ? A . n A 1 19 SER 19 9 ? ? ? A . n A 1 20 ASP 20 10 ? ? ? A . n A 1 21 ASN 21 11 ? ? ? A . n A 1 22 TYR 22 12 ? ? ? A . n A 1 23 THR 23 13 ? ? ? A . n A 1 24 GLU 24 14 ? ? ? A . n A 1 25 GLU 25 15 ? ? ? A . n A 1 26 MET 26 16 ? ? ? A . n A 1 27 GLY 27 17 ? ? ? A . n A 1 28 SER 28 18 ? ? ? A . n A 1 29 GLY 29 19 ? ? ? A . n A 1 30 ASP 30 20 ? ? ? A . n A 1 31 TYR 31 21 ? ? ? A . n A 1 32 ASP 32 22 ? ? ? A . n A 1 33 SER 33 23 ? ? ? A . n A 1 34 MET 34 24 ? ? ? A . n A 1 35 LYS 35 25 25 LYS LYS A . n A 1 36 GLU 36 26 26 GLU GLU A . n A 1 37 PRO 37 27 27 PRO PRO A . n A 1 38 CYS 38 28 28 CYS CYS A . n A 1 39 PHE 39 29 29 PHE PHE A . n A 1 40 ARG 40 30 30 ARG ARG A . n A 1 41 GLU 41 31 31 GLU GLU A . n A 1 42 GLU 42 32 32 GLU GLU A . n A 1 43 ASN 43 33 33 ASN ASN A . n A 1 44 ALA 44 34 34 ALA ALA A . n A 1 45 ASN 45 35 35 ASN ASN A . n A 1 46 PHE 46 36 36 PHE PHE A . n A 1 47 ASN 47 37 37 ASN ASN A . n A 1 48 LYS 48 38 38 LYS LYS A . n A 1 49 ILE 49 39 39 ILE ILE A . n A 1 50 PHE 50 40 40 PHE PHE A . n A 1 51 LEU 51 41 41 LEU LEU A . n A 1 52 PRO 52 42 42 PRO PRO A . n A 1 53 THR 53 43 43 THR THR A . n A 1 54 ILE 54 44 44 ILE ILE A . n A 1 55 TYR 55 45 45 TYR TYR A . n A 1 56 SER 56 46 46 SER SER A . n A 1 57 ILE 57 47 47 ILE ILE A . n A 1 58 ILE 58 48 48 ILE ILE A . n A 1 59 PHE 59 49 49 PHE PHE A . n A 1 60 LEU 60 50 50 LEU LEU A . n A 1 61 THR 61 51 51 THR THR A . n A 1 62 GLY 62 52 52 GLY GLY A . n A 1 63 ILE 63 53 53 ILE ILE A . n A 1 64 VAL 64 54 54 VAL VAL A . n A 1 65 GLY 65 55 55 GLY GLY A . n A 1 66 ASN 66 56 56 ASN ASN A . n A 1 67 GLY 67 57 57 GLY GLY A . n A 1 68 LEU 68 58 58 LEU LEU A . n A 1 69 VAL 69 59 59 VAL VAL A . n A 1 70 ILE 70 60 60 ILE ILE A . n A 1 71 LEU 71 61 61 LEU LEU A . n A 1 72 VAL 72 62 62 VAL VAL A . n A 1 73 MET 73 63 63 MET MET A . n A 1 74 GLY 74 64 64 GLY GLY A . n A 1 75 TYR 75 65 65 TYR TYR A . n A 1 76 GLN 76 66 66 GLN GLN A . n A 1 77 LYS 77 67 ? ? ? A . n A 1 78 LYS 78 68 ? ? ? A . n A 1 79 LEU 79 69 ? ? ? A . n A 1 80 ARG 80 70 ? ? ? A . n A 1 81 SER 81 71 71 SER SER A . n A 1 82 MET 82 72 72 MET MET A . n A 1 83 THR 83 73 73 THR THR A . n A 1 84 ASP 84 74 74 ASP ASP A . n A 1 85 LYS 85 75 75 LYS LYS A . n A 1 86 TYR 86 76 76 TYR TYR A . n A 1 87 ARG 87 77 77 ARG ARG A . n A 1 88 LEU 88 78 78 LEU LEU A . n A 1 89 HIS 89 79 79 HIS HIS A . n A 1 90 LEU 90 80 80 LEU LEU A . n A 1 91 SER 91 81 81 SER SER A . n A 1 92 VAL 92 82 82 VAL VAL A . n A 1 93 ALA 93 83 83 ALA ALA A . n A 1 94 ASP 94 84 84 ASP ASP A . n A 1 95 LEU 95 85 85 LEU LEU A . n A 1 96 LEU 96 86 86 LEU LEU A . n A 1 97 PHE 97 87 87 PHE PHE A . n A 1 98 VAL 98 88 88 VAL VAL A . n A 1 99 ILE 99 89 89 ILE ILE A . n A 1 100 THR 100 90 90 THR THR A . n A 1 101 LEU 101 91 91 LEU LEU A . n A 1 102 PRO 102 92 92 PRO PRO A . n A 1 103 PHE 103 93 93 PHE PHE A . n A 1 104 TRP 104 94 94 TRP TRP A . n A 1 105 ALA 105 95 95 ALA ALA A . n A 1 106 VAL 106 96 96 VAL VAL A . n A 1 107 ASP 107 97 97 ASP ASP A . n A 1 108 ALA 108 98 98 ALA ALA A . n A 1 109 VAL 109 99 99 VAL VAL A . n A 1 110 ALA 110 100 100 ALA ALA A . n A 1 111 ASN 111 101 101 ASN ASN A . n A 1 112 TRP 112 102 102 TRP TRP A . n A 1 113 TYR 113 103 103 TYR TYR A . n A 1 114 PHE 114 104 104 PHE PHE A . n A 1 115 GLY 115 105 105 GLY GLY A . n A 1 116 ASN 116 106 106 ASN ASN A . n A 1 117 PHE 117 107 107 PHE PHE A . n A 1 118 LEU 118 108 108 LEU LEU A . n A 1 119 CYS 119 109 109 CYS CYS A . n A 1 120 LYS 120 110 110 LYS LYS A . n A 1 121 ALA 121 111 111 ALA ALA A . n A 1 122 VAL 122 112 112 VAL VAL A . n A 1 123 HIS 123 113 113 HIS HIS A . n A 1 124 VAL 124 114 114 VAL VAL A . n A 1 125 ILE 125 115 115 ILE ILE A . n A 1 126 TYR 126 116 116 TYR TYR A . n A 1 127 THR 127 117 117 THR THR A . n A 1 128 VAL 128 118 118 VAL VAL A . n A 1 129 ASN 129 119 119 ASN ASN A . n A 1 130 LEU 130 120 120 LEU LEU A . n A 1 131 TYR 131 121 121 TYR TYR A . n A 1 132 SER 132 122 122 SER SER A . n A 1 133 SER 133 123 123 SER SER A . n A 1 134 VAL 134 124 124 VAL VAL A . n A 1 135 TRP 135 125 125 TRP TRP A . n A 1 136 ILE 136 126 126 ILE ILE A . n A 1 137 LEU 137 127 127 LEU LEU A . n A 1 138 ALA 138 128 128 ALA ALA A . n A 1 139 PHE 139 129 129 PHE PHE A . n A 1 140 ILE 140 130 130 ILE ILE A . n A 1 141 SER 141 131 131 SER SER A . n A 1 142 LEU 142 132 132 LEU LEU A . n A 1 143 ASP 143 133 133 ASP ASP A . n A 1 144 ARG 144 134 134 ARG ARG A . n A 1 145 TYR 145 135 135 TYR TYR A . n A 1 146 LEU 146 136 136 LEU LEU A . n A 1 147 ALA 147 137 137 ALA ALA A . n A 1 148 ILE 148 138 138 ILE ILE A . n A 1 149 VAL 149 139 139 VAL VAL A . n A 1 150 HIS 150 140 140 HIS HIS A . n A 1 151 ALA 151 141 141 ALA ALA A . n A 1 152 THR 152 142 142 THR THR A . n A 1 153 ASN 153 143 143 ASN ASN A . n A 1 154 SER 154 144 144 SER SER A . n A 1 155 GLN 155 145 145 GLN GLN A . n A 1 156 ARG 156 146 146 ARG ARG A . n A 1 157 PRO 157 147 147 PRO PRO A . n A 1 158 ARG 158 148 148 ARG ARG A . n A 1 159 LYS 159 149 149 LYS LYS A . n A 1 160 LEU 160 150 150 LEU LEU A . n A 1 161 LEU 161 151 151 LEU LEU A . n A 1 162 ALA 162 152 152 ALA ALA A . n A 1 163 GLU 163 153 153 GLU GLU A . n A 1 164 LYS 164 154 154 LYS LYS A . n A 1 165 VAL 165 155 155 VAL VAL A . n A 1 166 VAL 166 156 156 VAL VAL A . n A 1 167 TYR 167 157 157 TYR TYR A . n A 1 168 VAL 168 158 158 VAL VAL A . n A 1 169 GLY 169 159 159 GLY GLY A . n A 1 170 VAL 170 160 160 VAL VAL A . n A 1 171 TRP 171 161 161 TRP TRP A . n A 1 172 ILE 172 162 162 ILE ILE A . n A 1 173 PRO 173 163 163 PRO PRO A . n A 1 174 ALA 174 164 164 ALA ALA A . n A 1 175 LEU 175 165 165 LEU LEU A . n A 1 176 LEU 176 166 166 LEU LEU A . n A 1 177 LEU 177 167 167 LEU LEU A . n A 1 178 THR 178 168 168 THR THR A . n A 1 179 ILE 179 169 169 ILE ILE A . n A 1 180 PRO 180 170 170 PRO PRO A . n A 1 181 ASP 181 171 171 ASP ASP A . n A 1 182 PHE 182 172 172 PHE PHE A . n A 1 183 ILE 183 173 173 ILE ILE A . n A 1 184 PHE 184 174 174 PHE PHE A . n A 1 185 ALA 185 175 175 ALA ALA A . n A 1 186 ASN 186 176 176 ASN ASN A . n A 1 187 VAL 187 177 177 VAL VAL A . n A 1 188 SER 188 178 178 SER SER A . n A 1 189 GLU 189 179 179 GLU GLU A . n A 1 190 ALA 190 180 180 ALA ALA A . n A 1 191 ASP 191 181 181 ASP ASP A . n A 1 192 ASP 192 182 182 ASP ASP A . n A 1 193 ARG 193 183 183 ARG ARG A . n A 1 194 TYR 194 184 184 TYR TYR A . n A 1 195 ILE 195 185 185 ILE ILE A . n A 1 196 CYS 196 186 186 CYS CYS A . n A 1 197 ASP 197 187 187 ASP ASP A . n A 1 198 ARG 198 188 188 ARG ARG A . n A 1 199 PHE 199 189 189 PHE PHE A . n A 1 200 TYR 200 190 190 TYR TYR A . n A 1 201 PRO 201 191 191 PRO PRO A . n A 1 202 ASN 202 192 192 ASN ASN A . n A 1 203 ASP 203 193 193 ASP ASP A . n A 1 204 LEU 204 194 194 LEU LEU A . n A 1 205 TRP 205 195 195 TRP TRP A . n A 1 206 VAL 206 196 196 VAL VAL A . n A 1 207 VAL 207 197 197 VAL VAL A . n A 1 208 VAL 208 198 198 VAL VAL A . n A 1 209 PHE 209 199 199 PHE PHE A . n A 1 210 GLN 210 200 200 GLN GLN A . n A 1 211 PHE 211 201 201 PHE PHE A . n A 1 212 GLN 212 202 202 GLN GLN A . n A 1 213 HIS 213 203 203 HIS HIS A . n A 1 214 ILE 214 204 204 ILE ILE A . n A 1 215 MET 215 205 205 MET MET A . n A 1 216 VAL 216 206 206 VAL VAL A . n A 1 217 GLY 217 207 207 GLY GLY A . n A 1 218 LEU 218 208 208 LEU LEU A . n A 1 219 ILE 219 209 209 ILE ILE A . n A 1 220 LEU 220 210 210 LEU LEU A . n A 1 221 PRO 221 211 211 PRO PRO A . n A 1 222 GLY 222 212 212 GLY GLY A . n A 1 223 ILE 223 213 213 ILE ILE A . n A 1 224 VAL 224 214 214 VAL VAL A . n A 1 225 ILE 225 215 215 ILE ILE A . n A 1 226 LEU 226 216 216 LEU LEU A . n A 1 227 SER 227 217 217 SER SER A . n A 1 228 CYS 228 218 218 CYS CYS A . n A 1 229 TYR 229 219 219 TYR TYR A . n A 1 230 CYS 230 220 220 CYS CYS A . n A 1 231 ILE 231 221 221 ILE ILE A . n A 1 232 ILE 232 222 222 ILE ILE A . n A 1 233 ILE 233 223 223 ILE ILE A . n A 1 234 SER 234 224 224 SER SER A . n A 1 235 LYS 235 225 225 LYS LYS A . n A 1 236 LEU 236 226 226 LEU LEU A . n A 1 237 SER 237 227 227 SER SER A . n A 1 238 HIS 238 228 228 HIS HIS A . n A 1 239 ASN 239 1002 1002 ASN ASN A . n A 1 240 ILE 240 1003 1003 ILE ILE A . n A 1 241 PHE 241 1004 1004 PHE PHE A . n A 1 242 GLU 242 1005 1005 GLU GLU A . n A 1 243 MET 243 1006 1006 MET MET A . n A 1 244 LEU 244 1007 1007 LEU LEU A . n A 1 245 ARG 245 1008 1008 ARG ARG A . n A 1 246 ILE 246 1009 1009 ILE ILE A . n A 1 247 ASP 247 1010 1010 ASP ASP A . n A 1 248 GLU 248 1011 1011 GLU GLU A . n A 1 249 GLY 249 1012 1012 GLY GLY A . n A 1 250 LEU 250 1013 1013 LEU LEU A . n A 1 251 ARG 251 1014 1014 ARG ARG A . n A 1 252 LEU 252 1015 1015 LEU LEU A . n A 1 253 LYS 253 1016 1016 LYS LYS A . n A 1 254 ILE 254 1017 1017 ILE ILE A . n A 1 255 TYR 255 1018 1018 TYR TYR A . n A 1 256 LYS 256 1019 1019 LYS LYS A . n A 1 257 ASP 257 1020 1020 ASP ASP A . n A 1 258 THR 258 1021 1021 THR THR A . n A 1 259 GLU 259 1022 1022 GLU GLU A . n A 1 260 GLY 260 1023 1023 GLY GLY A . n A 1 261 TYR 261 1024 1024 TYR TYR A . n A 1 262 TYR 262 1025 1025 TYR TYR A . n A 1 263 THR 263 1026 1026 THR THR A . n A 1 264 ILE 264 1027 1027 ILE ILE A . n A 1 265 GLY 265 1028 1028 GLY GLY A . n A 1 266 ILE 266 1029 1029 ILE ILE A . n A 1 267 GLY 267 1030 1030 GLY GLY A . n A 1 268 HIS 268 1031 1031 HIS HIS A . n A 1 269 LEU 269 1032 1032 LEU LEU A . n A 1 270 LEU 270 1033 1033 LEU LEU A . n A 1 271 THR 271 1034 1034 THR THR A . n A 1 272 LYS 272 1035 1035 LYS LYS A . n A 1 273 SER 273 1036 1036 SER SER A . n A 1 274 PRO 274 1037 1037 PRO PRO A . n A 1 275 SER 275 1038 1038 SER SER A . n A 1 276 LEU 276 1039 1039 LEU LEU A . n A 1 277 ASN 277 1040 1040 ASN ASN A . n A 1 278 ALA 278 1041 1041 ALA ALA A . n A 1 279 ALA 279 1042 1042 ALA ALA A . n A 1 280 LYS 280 1043 1043 LYS LYS A . n A 1 281 SER 281 1044 1044 SER SER A . n A 1 282 GLU 282 1045 1045 GLU GLU A . n A 1 283 LEU 283 1046 1046 LEU LEU A . n A 1 284 ASP 284 1047 1047 ASP ASP A . n A 1 285 LYS 285 1048 1048 LYS LYS A . n A 1 286 ALA 286 1049 1049 ALA ALA A . n A 1 287 ILE 287 1050 1050 ILE ILE A . n A 1 288 GLY 288 1051 1051 GLY GLY A . n A 1 289 ARG 289 1052 1052 ARG ARG A . n A 1 290 ASN 290 1053 1053 ASN ASN A . n A 1 291 THR 291 1054 1054 THR THR A . n A 1 292 ASN 292 1055 1055 ASN ASN A . n A 1 293 GLY 293 1056 1056 GLY GLY A . n A 1 294 VAL 294 1057 1057 VAL VAL A . n A 1 295 ILE 295 1058 1058 ILE ILE A . n A 1 296 THR 296 1059 1059 THR THR A . n A 1 297 LYS 297 1060 1060 LYS LYS A . n A 1 298 ASP 298 1061 1061 ASP ASP A . n A 1 299 GLU 299 1062 1062 GLU GLU A . n A 1 300 ALA 300 1063 1063 ALA ALA A . n A 1 301 GLU 301 1064 1064 GLU GLU A . n A 1 302 LYS 302 1065 1065 LYS LYS A . n A 1 303 LEU 303 1066 1066 LEU LEU A . n A 1 304 PHE 304 1067 1067 PHE PHE A . n A 1 305 ASN 305 1068 1068 ASN ASN A . n A 1 306 GLN 306 1069 1069 GLN GLN A . n A 1 307 ASP 307 1070 1070 ASP ASP A . n A 1 308 VAL 308 1071 1071 VAL VAL A . n A 1 309 ASP 309 1072 1072 ASP ASP A . n A 1 310 ALA 310 1073 1073 ALA ALA A . n A 1 311 ALA 311 1074 1074 ALA ALA A . n A 1 312 VAL 312 1075 1075 VAL VAL A . n A 1 313 ARG 313 1076 1076 ARG ARG A . n A 1 314 GLY 314 1077 1077 GLY GLY A . n A 1 315 ILE 315 1078 1078 ILE ILE A . n A 1 316 LEU 316 1079 1079 LEU LEU A . n A 1 317 ARG 317 1080 1080 ARG ARG A . n A 1 318 ASN 318 1081 1081 ASN ASN A . n A 1 319 ALA 319 1082 1082 ALA ALA A . n A 1 320 LYS 320 1083 1083 LYS LYS A . n A 1 321 LEU 321 1084 1084 LEU LEU A . n A 1 322 LYS 322 1085 1085 LYS LYS A . n A 1 323 PRO 323 1086 1086 PRO PRO A . n A 1 324 VAL 324 1087 1087 VAL VAL A . n A 1 325 TYR 325 1088 1088 TYR TYR A . n A 1 326 ASP 326 1089 1089 ASP ASP A . n A 1 327 SER 327 1090 1090 SER SER A . n A 1 328 LEU 328 1091 1091 LEU LEU A . n A 1 329 ASP 329 1092 1092 ASP ASP A . n A 1 330 ALA 330 1093 1093 ALA ALA A . n A 1 331 VAL 331 1094 1094 VAL VAL A . n A 1 332 ARG 332 1095 1095 ARG ARG A . n A 1 333 ARG 333 1096 1096 ARG ARG A . n A 1 334 ALA 334 1097 1097 ALA ALA A . n A 1 335 ALA 335 1098 1098 ALA ALA A . n A 1 336 LEU 336 1099 1099 LEU LEU A . n A 1 337 ILE 337 1100 1100 ILE ILE A . n A 1 338 ASN 338 1101 1101 ASN ASN A . n A 1 339 MET 339 1102 1102 MET MET A . n A 1 340 VAL 340 1103 1103 VAL VAL A . n A 1 341 PHE 341 1104 1104 PHE PHE A . n A 1 342 GLN 342 1105 1105 GLN GLN A . n A 1 343 MET 343 1106 1106 MET MET A . n A 1 344 GLY 344 1107 1107 GLY GLY A . n A 1 345 GLU 345 1108 1108 GLU GLU A . n A 1 346 THR 346 1109 1109 THR THR A . n A 1 347 GLY 347 1110 1110 GLY GLY A . n A 1 348 VAL 348 1111 1111 VAL VAL A . n A 1 349 ALA 349 1112 1112 ALA ALA A . n A 1 350 GLY 350 1113 1113 GLY GLY A . n A 1 351 PHE 351 1114 1114 PHE PHE A . n A 1 352 THR 352 1115 1115 THR THR A . n A 1 353 ASN 353 1116 1116 ASN ASN A . n A 1 354 SER 354 1117 1117 SER SER A . n A 1 355 LEU 355 1118 1118 LEU LEU A . n A 1 356 ARG 356 1119 1119 ARG ARG A . n A 1 357 MET 357 1120 1120 MET MET A . n A 1 358 LEU 358 1121 1121 LEU LEU A . n A 1 359 GLN 359 1122 1122 GLN GLN A . n A 1 360 GLN 360 1123 1123 GLN GLN A . n A 1 361 LYS 361 1124 1124 LYS LYS A . n A 1 362 ARG 362 1125 1125 ARG ARG A . n A 1 363 TRP 363 1126 1126 TRP TRP A . n A 1 364 ASP 364 1127 1127 ASP ASP A . n A 1 365 GLU 365 1128 1128 GLU GLU A . n A 1 366 ALA 366 1129 1129 ALA ALA A . n A 1 367 ALA 367 1130 1130 ALA ALA A . n A 1 368 VAL 368 1131 1131 VAL VAL A . n A 1 369 ASN 369 1132 1132 ASN ASN A . n A 1 370 LEU 370 1133 1133 LEU LEU A . n A 1 371 ALA 371 1134 1134 ALA ALA A . n A 1 372 LYS 372 1135 1135 LYS LYS A . n A 1 373 SER 373 1136 1136 SER SER A . n A 1 374 ARG 374 1137 1137 ARG ARG A . n A 1 375 TRP 375 1138 1138 TRP TRP A . n A 1 376 TYR 376 1139 1139 TYR TYR A . n A 1 377 ASN 377 1140 1140 ASN ASN A . n A 1 378 GLN 378 1141 1141 GLN GLN A . n A 1 379 THR 379 1142 1142 THR THR A . n A 1 380 PRO 380 1143 1143 PRO PRO A . n A 1 381 ASN 381 1144 1144 ASN ASN A . n A 1 382 ARG 382 1145 1145 ARG ARG A . n A 1 383 ALA 383 1146 1146 ALA ALA A . n A 1 384 LYS 384 1147 1147 LYS LYS A . n A 1 385 ARG 385 1148 1148 ARG ARG A . n A 1 386 VAL 386 1149 1149 VAL VAL A . n A 1 387 ILE 387 1150 1150 ILE ILE A . n A 1 388 THR 388 1151 1151 THR THR A . n A 1 389 THR 389 1152 1152 THR THR A . n A 1 390 PHE 390 1153 1153 PHE PHE A . n A 1 391 ARG 391 1154 1154 ARG ARG A . n A 1 392 THR 392 1155 1155 THR THR A . n A 1 393 GLY 393 1156 1156 GLY GLY A . n A 1 394 THR 394 1157 1157 THR THR A . n A 1 395 TRP 395 1158 1158 TRP TRP A . n A 1 396 ASP 396 1159 1159 ASP ASP A . n A 1 397 ALA 397 1160 1160 ALA ALA A . n A 1 398 TYR 398 1161 1161 TYR TYR A . n A 1 399 SER 399 1200 ? ? ? A . n A 1 400 GLY 400 1201 ? ? ? A . n A 1 401 SER 401 1202 ? ? ? A . n A 1 402 GLY 402 231 231 GLY GLY A . n A 1 403 HIS 403 232 232 HIS HIS A . n A 1 404 GLN 404 233 233 GLN GLN A . n A 1 405 LYS 405 234 234 LYS LYS A . n A 1 406 ARG 406 235 235 ARG ARG A . n A 1 407 LYS 407 236 236 LYS LYS A . n A 1 408 ALA 408 237 237 ALA ALA A . n A 1 409 LEU 409 238 238 LEU LEU A . n A 1 410 LYS 410 239 239 LYS LYS A . n A 1 411 PRO 411 240 240 PRO PRO A . n A 1 412 THR 412 241 241 THR THR A . n A 1 413 VAL 413 242 242 VAL VAL A . n A 1 414 ILE 414 243 243 ILE ILE A . n A 1 415 LEU 415 244 244 LEU LEU A . n A 1 416 ILE 416 245 245 ILE ILE A . n A 1 417 LEU 417 246 246 LEU LEU A . n A 1 418 ALA 418 247 247 ALA ALA A . n A 1 419 PHE 419 248 248 PHE PHE A . n A 1 420 PHE 420 249 249 PHE PHE A . n A 1 421 ALA 421 250 250 ALA ALA A . n A 1 422 CYS 422 251 251 CYS CYS A . n A 1 423 TRP 423 252 252 TRP TRP A . n A 1 424 LEU 424 253 253 LEU LEU A . n A 1 425 PRO 425 254 254 PRO PRO A . n A 1 426 TYR 426 255 255 TYR TYR A . n A 1 427 TYR 427 256 256 TYR TYR A . n A 1 428 ILE 428 257 257 ILE ILE A . n A 1 429 GLY 429 258 258 GLY GLY A . n A 1 430 ILE 430 259 259 ILE ILE A . n A 1 431 SER 431 260 260 SER SER A . n A 1 432 ILE 432 261 261 ILE ILE A . n A 1 433 ASP 433 262 262 ASP ASP A . n A 1 434 SER 434 263 263 SER SER A . n A 1 435 PHE 435 264 264 PHE PHE A . n A 1 436 ILE 436 265 265 ILE ILE A . n A 1 437 LEU 437 266 266 LEU LEU A . n A 1 438 LEU 438 267 267 LEU LEU A . n A 1 439 GLU 439 268 268 GLU GLU A . n A 1 440 ILE 440 269 269 ILE ILE A . n A 1 441 ILE 441 270 270 ILE ILE A . n A 1 442 LYS 442 271 271 LYS LYS A . n A 1 443 GLN 443 272 272 GLN GLN A . n A 1 444 GLY 444 273 273 GLY GLY A . n A 1 445 CYS 445 274 274 CYS CYS A . n A 1 446 GLU 446 275 275 GLU GLU A . n A 1 447 PHE 447 276 276 PHE PHE A . n A 1 448 GLU 448 277 277 GLU GLU A . n A 1 449 ASN 449 278 278 ASN ASN A . n A 1 450 THR 450 279 279 THR THR A . n A 1 451 VAL 451 280 280 VAL VAL A . n A 1 452 HIS 452 281 281 HIS HIS A . n A 1 453 LYS 453 282 282 LYS LYS A . n A 1 454 TRP 454 283 283 TRP TRP A . n A 1 455 ILE 455 284 284 ILE ILE A . n A 1 456 SER 456 285 285 SER SER A . n A 1 457 ILE 457 286 286 ILE ILE A . n A 1 458 THR 458 287 287 THR THR A . n A 1 459 GLU 459 288 288 GLU GLU A . n A 1 460 ALA 460 289 289 ALA ALA A . n A 1 461 LEU 461 290 290 LEU LEU A . n A 1 462 ALA 462 291 291 ALA ALA A . n A 1 463 PHE 463 292 292 PHE PHE A . n A 1 464 PHE 464 293 293 PHE PHE A . n A 1 465 HIS 465 294 294 HIS HIS A . n A 1 466 CYS 466 295 295 CYS CYS A . n A 1 467 CYS 467 296 296 CYS CYS A . n A 1 468 LEU 468 297 297 LEU LEU A . n A 1 469 ASN 469 298 298 ASN ASN A . n A 1 470 PRO 470 299 299 PRO PRO A . n A 1 471 ILE 471 300 300 ILE ILE A . n A 1 472 LEU 472 301 301 LEU LEU A . n A 1 473 TYR 473 302 302 TYR TYR A . n A 1 474 ALA 474 303 303 ALA ALA A . n A 1 475 PHE 475 304 ? ? ? A . n A 1 476 LEU 476 305 ? ? ? A . n A 1 477 GLY 477 306 ? ? ? A . n A 1 478 ALA 478 307 ? ? ? A . n A 1 479 LYS 479 308 ? ? ? A . n A 1 480 PHE 480 309 ? ? ? A . n A 1 481 LYS 481 310 ? ? ? A . n A 1 482 THR 482 311 ? ? ? A . n A 1 483 SER 483 312 ? ? ? A . n A 1 484 ALA 484 313 ? ? ? A . n A 1 485 GLN 485 314 ? ? ? A . n A 1 486 HIS 486 315 ? ? ? A . n A 1 487 ALA 487 316 ? ? ? A . n A 1 488 LEU 488 317 ? ? ? A . n A 1 489 THR 489 318 ? ? ? A . n A 1 490 SER 490 319 ? ? ? A . n A 1 491 GLY 491 320 ? ? ? A . n A 1 492 ARG 492 321 ? ? ? A . n A 1 493 PRO 493 322 ? ? ? A . n A 1 494 LEU 494 323 ? ? ? A . n A 1 495 GLU 495 324 ? ? ? A . n A 1 496 VAL 496 325 ? ? ? A . n A 1 497 LEU 497 326 ? ? ? A . n A 1 498 PHE 498 327 ? ? ? A . n A 1 499 GLN 499 328 ? ? ? A . n B 2 1 ARG 1 1 1 ARG ARG I . n B 2 2 ARG 2 2 2 ARG ARG I . n B 2 3 ALN 3 3 3 ALN ALN I . n B 2 4 CYS 4 4 4 CYS CYS I . n B 2 5 TYR 5 5 5 TYR TYR I . n B 2 6 GLN 6 6 6 GLN GLN I . n B 2 7 LYS 7 7 7 LYS LYS I . n B 2 8 DPR 8 8 8 DPR DPR I . n B 2 9 PRO 9 9 9 PRO PRO I . n B 2 10 TYR 10 10 10 TYR TYR I . n B 2 11 ARG 11 11 11 ARG ARG I . n B 2 12 CIR 12 12 12 CIR CIR I . n B 2 13 CYS 13 13 13 CYS CYS I . n B 2 14 ARG 14 14 14 ARG ARG I . n B 2 15 GLY 15 15 15 GLY GLY I . n B 2 16 DPR 16 16 16 DPR DPR I . n # loop_ _pdbx_SG_project.id _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center 1 'PSI, Protein Structure Initiative' 'Accelerated Technologies Center for Gene to 3D Structure' ATCG3D 2 PSI:Biology 'GPCR Network' GPCR # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1600 1600 HOH HOH A . C 3 HOH 2 1603 1603 HOH HOH A . C 3 HOH 3 1605 1605 HOH HOH A . D 3 HOH 1 1601 1601 HOH HOH I . D 3 HOH 2 1602 1602 HOH HOH I . D 3 HOH 3 1604 1604 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_001107 _pdbx_molecule_features.name 'Polyphemusin analog, CXC chemokine receptor antagonist' _pdbx_molecule_features.type Oligopeptide _pdbx_molecule_features.class Antagonist _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001107 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ALN 3 I ALN 3 ? ALA NAPHTHALEN-2-YL-3-ALANINE 2 B CIR 12 I CIR 12 ? ARG CITRULLINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7360 ? 1 MORE -12 ? 1 'SSA (A^2)' 44420 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 82.0800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-05-02 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2017-07-26 6 'Structure model' 1 5 2021-10-06 7 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' Other 4 5 'Structure model' 'Refinement description' 5 5 'Structure model' 'Source and taxonomy' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 7 'Structure model' 'Atomic model' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' 11 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' entity_src_gen 2 5 'Structure model' software 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 7 'Structure model' atom_site 7 7 'Structure model' chem_comp_atom 8 7 'Structure model' chem_comp_bond 9 7 'Structure model' pdbx_validate_peptide_omega 10 7 'Structure model' pdbx_validate_rmsd_angle 11 7 'Structure model' struct_conn 12 7 'Structure model' struct_ref # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_conn.pdbx_dist_value' 4 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 6 'Structure model' '_struct_conn.pdbx_value_order' 6 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 7 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 14 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 18 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 19 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 20 6 'Structure model' '_struct_ref_seq_dif.details' 21 7 'Structure model' '_atom_site.auth_atom_id' 22 7 'Structure model' '_atom_site.label_atom_id' 23 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 7 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 56.8558 15.0034 6.2863 0.0526 0.1669 0.2390 -0.0106 0.0657 -0.0696 0.1326 1.6844 1.1636 0.2962 0.2334 -0.2676 -0.0594 0.0472 -0.0348 -0.1450 0.1410 -0.2135 -0.0219 0.1337 -0.0817 'X-RAY DIFFRACTION' 2 ? refined 35.2422 -20.8302 24.5296 0.1686 0.0892 0.1050 -0.0329 -0.0135 0.0187 4.4070 0.3599 1.9082 0.9320 0.7447 -0.3647 -0.2832 0.0474 -0.0242 -0.1104 0.0112 -0.0591 0.0904 0.0806 0.2720 'X-RAY DIFFRACTION' 3 ? refined 50.1136 16.3673 15.7284 0.1509 0.1712 0.1511 -0.0758 0.0310 -0.0263 0.4506 3.7115 1.0419 -0.6918 -0.4711 0.5601 0.0483 -0.0562 0.0183 0.4368 -0.1400 0.0068 0.0942 -0.0059 0.0917 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 25 ? ? A 228 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 1002 ? ? A 1161 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 231 ? ? A 303 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0088 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3OE0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE PROTEIN IS A FUSION PROTEIN WITH RESIDUES ASN1002-TYR1161 OF T4 LYSOZYME INSERTED BETWEEN HIS228 AND GLY231 OF CXCR4, AS INDICATED AS CXCR4-3 IN THE PUBLICATION. THE SMALL CYCLIC PEPTIDE NAMED CVX15 IS CXC CHEMOKINE RECEPTOR (CXCR)4 ANTAGONIST, AS WELL AS ANALOG OF POLYPHEMUSIN FROM LIMULUS POLYPHEMUS (HORSESHOE CRAB). PART OF THE SEQUENCE OF THE SMALL PEPTIDE HAS SIMILARITY TO UNITPROT ENTRY P14215 WITH SEQUENCE RRWCFRVCYRGFCYRKCR ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA I ARG 2 ? ? C I ARG 2 ? ? N I ALN 3 ? ? 134.51 117.20 17.31 2.20 Y 2 1 O I ARG 2 ? ? C I ARG 2 ? ? N I ALN 3 ? ? 106.41 122.70 -16.29 1.60 Y 3 1 CA I ARG 11 ? ? C I ARG 11 ? ? N I CIR 12 ? ? 130.72 117.20 13.52 2.20 Y 4 1 O I ARG 11 ? ? C I ARG 11 ? ? N I CIR 12 ? ? 108.79 122.70 -13.91 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 65 ? ? -111.28 -165.19 2 1 ALA A 100 ? ? -115.86 -74.07 3 1 VAL A 160 ? ? -124.08 -63.58 4 1 ARG A 1080 ? ? -109.31 40.34 5 1 GLN A 233 ? ? 42.60 77.07 6 1 LYS A 234 ? ? -142.01 48.31 7 1 GLN A 272 ? ? -148.90 23.36 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 CIR _pdbx_validate_peptide_omega.auth_asym_id_1 I _pdbx_validate_peptide_omega.auth_seq_id_1 12 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 CYS _pdbx_validate_peptide_omega.auth_asym_id_2 I _pdbx_validate_peptide_omega.auth_seq_id_2 13 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 149.89 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 233 ? CG ? A GLN 404 CG 2 1 Y 1 A GLN 233 ? CD ? A GLN 404 CD 3 1 Y 1 A GLN 233 ? OE1 ? A GLN 404 OE1 4 1 Y 1 A GLN 233 ? NE2 ? A GLN 404 NE2 5 1 Y 1 A LYS 234 ? CG ? A LYS 405 CG 6 1 Y 1 A LYS 234 ? CD ? A LYS 405 CD 7 1 Y 1 A LYS 234 ? CE ? A LYS 405 CE 8 1 Y 1 A LYS 234 ? NZ ? A LYS 405 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP -9 ? A ASP 1 2 1 Y 1 A TYR -8 ? A TYR 2 3 1 Y 1 A LYS -7 ? A LYS 3 4 1 Y 1 A ASP -6 ? A ASP 4 5 1 Y 1 A ASP -5 ? A ASP 5 6 1 Y 1 A ASP -4 ? A ASP 6 7 1 Y 1 A ASP -3 ? A ASP 7 8 1 Y 1 A ALA -2 ? A ALA 8 9 1 Y 1 A GLY -1 ? A GLY 9 10 1 Y 1 A ALA 0 ? A ALA 10 11 1 Y 1 A PRO 1 ? A PRO 11 12 1 Y 1 A GLU 2 ? A GLU 12 13 1 Y 1 A GLY 3 ? A GLY 13 14 1 Y 1 A ILE 4 ? A ILE 14 15 1 Y 1 A SER 5 ? A SER 15 16 1 Y 1 A ILE 6 ? A ILE 16 17 1 Y 1 A TYR 7 ? A TYR 17 18 1 Y 1 A THR 8 ? A THR 18 19 1 Y 1 A SER 9 ? A SER 19 20 1 Y 1 A ASP 10 ? A ASP 20 21 1 Y 1 A ASN 11 ? A ASN 21 22 1 Y 1 A TYR 12 ? A TYR 22 23 1 Y 1 A THR 13 ? A THR 23 24 1 Y 1 A GLU 14 ? A GLU 24 25 1 Y 1 A GLU 15 ? A GLU 25 26 1 Y 1 A MET 16 ? A MET 26 27 1 Y 1 A GLY 17 ? A GLY 27 28 1 Y 1 A SER 18 ? A SER 28 29 1 Y 1 A GLY 19 ? A GLY 29 30 1 Y 1 A ASP 20 ? A ASP 30 31 1 Y 1 A TYR 21 ? A TYR 31 32 1 Y 1 A ASP 22 ? A ASP 32 33 1 Y 1 A SER 23 ? A SER 33 34 1 Y 1 A MET 24 ? A MET 34 35 1 Y 1 A LYS 67 ? A LYS 77 36 1 Y 1 A LYS 68 ? A LYS 78 37 1 Y 1 A LEU 69 ? A LEU 79 38 1 Y 1 A ARG 70 ? A ARG 80 39 1 Y 1 A SER 1200 ? A SER 399 40 1 Y 1 A GLY 1201 ? A GLY 400 41 1 Y 1 A SER 1202 ? A SER 401 42 1 Y 1 A PHE 304 ? A PHE 475 43 1 Y 1 A LEU 305 ? A LEU 476 44 1 Y 1 A GLY 306 ? A GLY 477 45 1 Y 1 A ALA 307 ? A ALA 478 46 1 Y 1 A LYS 308 ? A LYS 479 47 1 Y 1 A PHE 309 ? A PHE 480 48 1 Y 1 A LYS 310 ? A LYS 481 49 1 Y 1 A THR 311 ? A THR 482 50 1 Y 1 A SER 312 ? A SER 483 51 1 Y 1 A ALA 313 ? A ALA 484 52 1 Y 1 A GLN 314 ? A GLN 485 53 1 Y 1 A HIS 315 ? A HIS 486 54 1 Y 1 A ALA 316 ? A ALA 487 55 1 Y 1 A LEU 317 ? A LEU 488 56 1 Y 1 A THR 318 ? A THR 489 57 1 Y 1 A SER 319 ? A SER 490 58 1 Y 1 A GLY 320 ? A GLY 491 59 1 Y 1 A ARG 321 ? A ARG 492 60 1 Y 1 A PRO 322 ? A PRO 493 61 1 Y 1 A LEU 323 ? A LEU 494 62 1 Y 1 A GLU 324 ? A GLU 495 63 1 Y 1 A VAL 325 ? A VAL 496 64 1 Y 1 A LEU 326 ? A LEU 497 65 1 Y 1 A PHE 327 ? A PHE 498 66 1 Y 1 A GLN 328 ? A GLN 499 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ALN N N N N 14 ALN CA C N S 15 ALN C C N N 16 ALN O O N N 17 ALN CB C N N 18 ALN CG1 C Y N 19 ALN CD1 C Y N 20 ALN CE1 C Y N 21 ALN CD2 C Y N 22 ALN CE2 C Y N 23 ALN CZ1 C Y N 24 ALN CG2 C Y N 25 ALN CD3 C Y N 26 ALN CE3 C Y N 27 ALN CZ2 C Y N 28 ALN OXT O N N 29 ALN H H N N 30 ALN H2 H N N 31 ALN HA H N N 32 ALN HB2 H N N 33 ALN HB3 H N N 34 ALN HD1 H N N 35 ALN HE1 H N N 36 ALN HZ1 H N N 37 ALN HG2 H N N 38 ALN HD3 H N N 39 ALN HE3 H N N 40 ALN HZ2 H N N 41 ALN HXT H N N 42 ARG N N N N 43 ARG CA C N S 44 ARG C C N N 45 ARG O O N N 46 ARG CB C N N 47 ARG CG C N N 48 ARG CD C N N 49 ARG NE N N N 50 ARG CZ C N N 51 ARG NH1 N N N 52 ARG NH2 N N N 53 ARG OXT O N N 54 ARG H H N N 55 ARG H2 H N N 56 ARG HA H N N 57 ARG HB2 H N N 58 ARG HB3 H N N 59 ARG HG2 H N N 60 ARG HG3 H N N 61 ARG HD2 H N N 62 ARG HD3 H N N 63 ARG HE H N N 64 ARG HH11 H N N 65 ARG HH12 H N N 66 ARG HH21 H N N 67 ARG HH22 H N N 68 ARG HXT H N N 69 ASN N N N N 70 ASN CA C N S 71 ASN C C N N 72 ASN O O N N 73 ASN CB C N N 74 ASN CG C N N 75 ASN OD1 O N N 76 ASN ND2 N N N 77 ASN OXT O N N 78 ASN H H N N 79 ASN H2 H N N 80 ASN HA H N N 81 ASN HB2 H N N 82 ASN HB3 H N N 83 ASN HD21 H N N 84 ASN HD22 H N N 85 ASN HXT H N N 86 ASP N N N N 87 ASP CA C N S 88 ASP C C N N 89 ASP O O N N 90 ASP CB C N N 91 ASP CG C N N 92 ASP OD1 O N N 93 ASP OD2 O N N 94 ASP OXT O N N 95 ASP H H N N 96 ASP H2 H N N 97 ASP HA H N N 98 ASP HB2 H N N 99 ASP HB3 H N N 100 ASP HD2 H N N 101 ASP HXT H N N 102 CIR C C N N 103 CIR O O N N 104 CIR OXT O N N 105 CIR CA C N S 106 CIR N N N N 107 CIR C3 C N N 108 CIR C4 C N N 109 CIR C5 C N N 110 CIR N6 N N N 111 CIR C7 C N N 112 CIR O7 O N N 113 CIR N8 N N N 114 CIR HXT H N N 115 CIR HA H N N 116 CIR H2 H N N 117 CIR H H N N 118 CIR H31 H N N 119 CIR H32 H N N 120 CIR H41 H N N 121 CIR H42 H N N 122 CIR H51 H N N 123 CIR H52 H N N 124 CIR HN6 H N N 125 CIR HN81 H N N 126 CIR HN82 H N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 DPR N N N N 142 DPR CA C N R 143 DPR CB C N N 144 DPR CG C N N 145 DPR CD C N N 146 DPR C C N N 147 DPR O O N N 148 DPR OXT O N N 149 DPR H H N N 150 DPR HA H N N 151 DPR HB2 H N N 152 DPR HB3 H N N 153 DPR HG2 H N N 154 DPR HG3 H N N 155 DPR HD2 H N N 156 DPR HD3 H N N 157 DPR HXT H N N 158 GLN N N N N 159 GLN CA C N S 160 GLN C C N N 161 GLN O O N N 162 GLN CB C N N 163 GLN CG C N N 164 GLN CD C N N 165 GLN OE1 O N N 166 GLN NE2 N N N 167 GLN OXT O N N 168 GLN H H N N 169 GLN H2 H N N 170 GLN HA H N N 171 GLN HB2 H N N 172 GLN HB3 H N N 173 GLN HG2 H N N 174 GLN HG3 H N N 175 GLN HE21 H N N 176 GLN HE22 H N N 177 GLN HXT H N N 178 GLU N N N N 179 GLU CA C N S 180 GLU C C N N 181 GLU O O N N 182 GLU CB C N N 183 GLU CG C N N 184 GLU CD C N N 185 GLU OE1 O N N 186 GLU OE2 O N N 187 GLU OXT O N N 188 GLU H H N N 189 GLU H2 H N N 190 GLU HA H N N 191 GLU HB2 H N N 192 GLU HB3 H N N 193 GLU HG2 H N N 194 GLU HG3 H N N 195 GLU HE2 H N N 196 GLU HXT H N N 197 GLY N N N N 198 GLY CA C N N 199 GLY C C N N 200 GLY O O N N 201 GLY OXT O N N 202 GLY H H N N 203 GLY H2 H N N 204 GLY HA2 H N N 205 GLY HA3 H N N 206 GLY HXT H N N 207 HIS N N N N 208 HIS CA C N S 209 HIS C C N N 210 HIS O O N N 211 HIS CB C N N 212 HIS CG C Y N 213 HIS ND1 N Y N 214 HIS CD2 C Y N 215 HIS CE1 C Y N 216 HIS NE2 N Y N 217 HIS OXT O N N 218 HIS H H N N 219 HIS H2 H N N 220 HIS HA H N N 221 HIS HB2 H N N 222 HIS HB3 H N N 223 HIS HD1 H N N 224 HIS HD2 H N N 225 HIS HE1 H N N 226 HIS HE2 H N N 227 HIS HXT H N N 228 HOH O O N N 229 HOH H1 H N N 230 HOH H2 H N N 231 ILE N N N N 232 ILE CA C N S 233 ILE C C N N 234 ILE O O N N 235 ILE CB C N S 236 ILE CG1 C N N 237 ILE CG2 C N N 238 ILE CD1 C N N 239 ILE OXT O N N 240 ILE H H N N 241 ILE H2 H N N 242 ILE HA H N N 243 ILE HB H N N 244 ILE HG12 H N N 245 ILE HG13 H N N 246 ILE HG21 H N N 247 ILE HG22 H N N 248 ILE HG23 H N N 249 ILE HD11 H N N 250 ILE HD12 H N N 251 ILE HD13 H N N 252 ILE HXT H N N 253 LEU N N N N 254 LEU CA C N S 255 LEU C C N N 256 LEU O O N N 257 LEU CB C N N 258 LEU CG C N N 259 LEU CD1 C N N 260 LEU CD2 C N N 261 LEU OXT O N N 262 LEU H H N N 263 LEU H2 H N N 264 LEU HA H N N 265 LEU HB2 H N N 266 LEU HB3 H N N 267 LEU HG H N N 268 LEU HD11 H N N 269 LEU HD12 H N N 270 LEU HD13 H N N 271 LEU HD21 H N N 272 LEU HD22 H N N 273 LEU HD23 H N N 274 LEU HXT H N N 275 LYS N N N N 276 LYS CA C N S 277 LYS C C N N 278 LYS O O N N 279 LYS CB C N N 280 LYS CG C N N 281 LYS CD C N N 282 LYS CE C N N 283 LYS NZ N N N 284 LYS OXT O N N 285 LYS H H N N 286 LYS H2 H N N 287 LYS HA H N N 288 LYS HB2 H N N 289 LYS HB3 H N N 290 LYS HG2 H N N 291 LYS HG3 H N N 292 LYS HD2 H N N 293 LYS HD3 H N N 294 LYS HE2 H N N 295 LYS HE3 H N N 296 LYS HZ1 H N N 297 LYS HZ2 H N N 298 LYS HZ3 H N N 299 LYS HXT H N N 300 MET N N N N 301 MET CA C N S 302 MET C C N N 303 MET O O N N 304 MET CB C N N 305 MET CG C N N 306 MET SD S N N 307 MET CE C N N 308 MET OXT O N N 309 MET H H N N 310 MET H2 H N N 311 MET HA H N N 312 MET HB2 H N N 313 MET HB3 H N N 314 MET HG2 H N N 315 MET HG3 H N N 316 MET HE1 H N N 317 MET HE2 H N N 318 MET HE3 H N N 319 MET HXT H N N 320 PHE N N N N 321 PHE CA C N S 322 PHE C C N N 323 PHE O O N N 324 PHE CB C N N 325 PHE CG C Y N 326 PHE CD1 C Y N 327 PHE CD2 C Y N 328 PHE CE1 C Y N 329 PHE CE2 C Y N 330 PHE CZ C Y N 331 PHE OXT O N N 332 PHE H H N N 333 PHE H2 H N N 334 PHE HA H N N 335 PHE HB2 H N N 336 PHE HB3 H N N 337 PHE HD1 H N N 338 PHE HD2 H N N 339 PHE HE1 H N N 340 PHE HE2 H N N 341 PHE HZ H N N 342 PHE HXT H N N 343 PRO N N N N 344 PRO CA C N S 345 PRO C C N N 346 PRO O O N N 347 PRO CB C N N 348 PRO CG C N N 349 PRO CD C N N 350 PRO OXT O N N 351 PRO H H N N 352 PRO HA H N N 353 PRO HB2 H N N 354 PRO HB3 H N N 355 PRO HG2 H N N 356 PRO HG3 H N N 357 PRO HD2 H N N 358 PRO HD3 H N N 359 PRO HXT H N N 360 SER N N N N 361 SER CA C N S 362 SER C C N N 363 SER O O N N 364 SER CB C N N 365 SER OG O N N 366 SER OXT O N N 367 SER H H N N 368 SER H2 H N N 369 SER HA H N N 370 SER HB2 H N N 371 SER HB3 H N N 372 SER HG H N N 373 SER HXT H N N 374 THR N N N N 375 THR CA C N S 376 THR C C N N 377 THR O O N N 378 THR CB C N R 379 THR OG1 O N N 380 THR CG2 C N N 381 THR OXT O N N 382 THR H H N N 383 THR H2 H N N 384 THR HA H N N 385 THR HB H N N 386 THR HG1 H N N 387 THR HG21 H N N 388 THR HG22 H N N 389 THR HG23 H N N 390 THR HXT H N N 391 TRP N N N N 392 TRP CA C N S 393 TRP C C N N 394 TRP O O N N 395 TRP CB C N N 396 TRP CG C Y N 397 TRP CD1 C Y N 398 TRP CD2 C Y N 399 TRP NE1 N Y N 400 TRP CE2 C Y N 401 TRP CE3 C Y N 402 TRP CZ2 C Y N 403 TRP CZ3 C Y N 404 TRP CH2 C Y N 405 TRP OXT O N N 406 TRP H H N N 407 TRP H2 H N N 408 TRP HA H N N 409 TRP HB2 H N N 410 TRP HB3 H N N 411 TRP HD1 H N N 412 TRP HE1 H N N 413 TRP HE3 H N N 414 TRP HZ2 H N N 415 TRP HZ3 H N N 416 TRP HH2 H N N 417 TRP HXT H N N 418 TYR N N N N 419 TYR CA C N S 420 TYR C C N N 421 TYR O O N N 422 TYR CB C N N 423 TYR CG C Y N 424 TYR CD1 C Y N 425 TYR CD2 C Y N 426 TYR CE1 C Y N 427 TYR CE2 C Y N 428 TYR CZ C Y N 429 TYR OH O N N 430 TYR OXT O N N 431 TYR H H N N 432 TYR H2 H N N 433 TYR HA H N N 434 TYR HB2 H N N 435 TYR HB3 H N N 436 TYR HD1 H N N 437 TYR HD2 H N N 438 TYR HE1 H N N 439 TYR HE2 H N N 440 TYR HH H N N 441 TYR HXT H N N 442 VAL N N N N 443 VAL CA C N S 444 VAL C C N N 445 VAL O O N N 446 VAL CB C N N 447 VAL CG1 C N N 448 VAL CG2 C N N 449 VAL OXT O N N 450 VAL H H N N 451 VAL H2 H N N 452 VAL HA H N N 453 VAL HB H N N 454 VAL HG11 H N N 455 VAL HG12 H N N 456 VAL HG13 H N N 457 VAL HG21 H N N 458 VAL HG22 H N N 459 VAL HG23 H N N 460 VAL HXT H N N 461 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ALN N CA sing N N 13 ALN N H sing N N 14 ALN N H2 sing N N 15 ALN CA C sing N N 16 ALN CA CB sing N N 17 ALN CA HA sing N N 18 ALN C O doub N N 19 ALN C OXT sing N N 20 ALN CB CG1 sing N N 21 ALN CB HB2 sing N N 22 ALN CB HB3 sing N N 23 ALN CG1 CD1 doub Y N 24 ALN CG1 CD2 sing Y N 25 ALN CD1 CE1 sing Y N 26 ALN CD1 HD1 sing N N 27 ALN CE1 CZ1 doub Y N 28 ALN CE1 HE1 sing N N 29 ALN CD2 CE2 doub Y N 30 ALN CD2 CG2 sing Y N 31 ALN CE2 CZ1 sing Y N 32 ALN CE2 CZ2 sing Y N 33 ALN CZ1 HZ1 sing N N 34 ALN CG2 CD3 doub Y N 35 ALN CG2 HG2 sing N N 36 ALN CD3 CE3 sing Y N 37 ALN CD3 HD3 sing N N 38 ALN CE3 CZ2 doub Y N 39 ALN CE3 HE3 sing N N 40 ALN CZ2 HZ2 sing N N 41 ALN OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CIR C O doub N N 100 CIR C OXT sing N N 101 CIR C CA sing N N 102 CIR OXT HXT sing N N 103 CIR CA N sing N N 104 CIR CA C3 sing N N 105 CIR CA HA sing N N 106 CIR N H2 sing N N 107 CIR N H sing N N 108 CIR C3 C4 sing N N 109 CIR C3 H31 sing N N 110 CIR C3 H32 sing N N 111 CIR C4 C5 sing N N 112 CIR C4 H41 sing N N 113 CIR C4 H42 sing N N 114 CIR C5 N6 sing N N 115 CIR C5 H51 sing N N 116 CIR C5 H52 sing N N 117 CIR N6 C7 sing N N 118 CIR N6 HN6 sing N N 119 CIR C7 O7 doub N N 120 CIR C7 N8 sing N N 121 CIR N8 HN81 sing N N 122 CIR N8 HN82 sing N N 123 CYS N CA sing N N 124 CYS N H sing N N 125 CYS N H2 sing N N 126 CYS CA C sing N N 127 CYS CA CB sing N N 128 CYS CA HA sing N N 129 CYS C O doub N N 130 CYS C OXT sing N N 131 CYS CB SG sing N N 132 CYS CB HB2 sing N N 133 CYS CB HB3 sing N N 134 CYS SG HG sing N N 135 CYS OXT HXT sing N N 136 DPR N CA sing N N 137 DPR N CD sing N N 138 DPR N H sing N N 139 DPR CA CB sing N N 140 DPR CA C sing N N 141 DPR CA HA sing N N 142 DPR CB CG sing N N 143 DPR CB HB2 sing N N 144 DPR CB HB3 sing N N 145 DPR CG CD sing N N 146 DPR CG HG2 sing N N 147 DPR CG HG3 sing N N 148 DPR CD HD2 sing N N 149 DPR CD HD3 sing N N 150 DPR C O doub N N 151 DPR C OXT sing N N 152 DPR OXT HXT sing N N 153 GLN N CA sing N N 154 GLN N H sing N N 155 GLN N H2 sing N N 156 GLN CA C sing N N 157 GLN CA CB sing N N 158 GLN CA HA sing N N 159 GLN C O doub N N 160 GLN C OXT sing N N 161 GLN CB CG sing N N 162 GLN CB HB2 sing N N 163 GLN CB HB3 sing N N 164 GLN CG CD sing N N 165 GLN CG HG2 sing N N 166 GLN CG HG3 sing N N 167 GLN CD OE1 doub N N 168 GLN CD NE2 sing N N 169 GLN NE2 HE21 sing N N 170 GLN NE2 HE22 sing N N 171 GLN OXT HXT sing N N 172 GLU N CA sing N N 173 GLU N H sing N N 174 GLU N H2 sing N N 175 GLU CA C sing N N 176 GLU CA CB sing N N 177 GLU CA HA sing N N 178 GLU C O doub N N 179 GLU C OXT sing N N 180 GLU CB CG sing N N 181 GLU CB HB2 sing N N 182 GLU CB HB3 sing N N 183 GLU CG CD sing N N 184 GLU CG HG2 sing N N 185 GLU CG HG3 sing N N 186 GLU CD OE1 doub N N 187 GLU CD OE2 sing N N 188 GLU OE2 HE2 sing N N 189 GLU OXT HXT sing N N 190 GLY N CA sing N N 191 GLY N H sing N N 192 GLY N H2 sing N N 193 GLY CA C sing N N 194 GLY CA HA2 sing N N 195 GLY CA HA3 sing N N 196 GLY C O doub N N 197 GLY C OXT sing N N 198 GLY OXT HXT sing N N 199 HIS N CA sing N N 200 HIS N H sing N N 201 HIS N H2 sing N N 202 HIS CA C sing N N 203 HIS CA CB sing N N 204 HIS CA HA sing N N 205 HIS C O doub N N 206 HIS C OXT sing N N 207 HIS CB CG sing N N 208 HIS CB HB2 sing N N 209 HIS CB HB3 sing N N 210 HIS CG ND1 sing Y N 211 HIS CG CD2 doub Y N 212 HIS ND1 CE1 doub Y N 213 HIS ND1 HD1 sing N N 214 HIS CD2 NE2 sing Y N 215 HIS CD2 HD2 sing N N 216 HIS CE1 NE2 sing Y N 217 HIS CE1 HE1 sing N N 218 HIS NE2 HE2 sing N N 219 HIS OXT HXT sing N N 220 HOH O H1 sing N N 221 HOH O H2 sing N N 222 ILE N CA sing N N 223 ILE N H sing N N 224 ILE N H2 sing N N 225 ILE CA C sing N N 226 ILE CA CB sing N N 227 ILE CA HA sing N N 228 ILE C O doub N N 229 ILE C OXT sing N N 230 ILE CB CG1 sing N N 231 ILE CB CG2 sing N N 232 ILE CB HB sing N N 233 ILE CG1 CD1 sing N N 234 ILE CG1 HG12 sing N N 235 ILE CG1 HG13 sing N N 236 ILE CG2 HG21 sing N N 237 ILE CG2 HG22 sing N N 238 ILE CG2 HG23 sing N N 239 ILE CD1 HD11 sing N N 240 ILE CD1 HD12 sing N N 241 ILE CD1 HD13 sing N N 242 ILE OXT HXT sing N N 243 LEU N CA sing N N 244 LEU N H sing N N 245 LEU N H2 sing N N 246 LEU CA C sing N N 247 LEU CA CB sing N N 248 LEU CA HA sing N N 249 LEU C O doub N N 250 LEU C OXT sing N N 251 LEU CB CG sing N N 252 LEU CB HB2 sing N N 253 LEU CB HB3 sing N N 254 LEU CG CD1 sing N N 255 LEU CG CD2 sing N N 256 LEU CG HG sing N N 257 LEU CD1 HD11 sing N N 258 LEU CD1 HD12 sing N N 259 LEU CD1 HD13 sing N N 260 LEU CD2 HD21 sing N N 261 LEU CD2 HD22 sing N N 262 LEU CD2 HD23 sing N N 263 LEU OXT HXT sing N N 264 LYS N CA sing N N 265 LYS N H sing N N 266 LYS N H2 sing N N 267 LYS CA C sing N N 268 LYS CA CB sing N N 269 LYS CA HA sing N N 270 LYS C O doub N N 271 LYS C OXT sing N N 272 LYS CB CG sing N N 273 LYS CB HB2 sing N N 274 LYS CB HB3 sing N N 275 LYS CG CD sing N N 276 LYS CG HG2 sing N N 277 LYS CG HG3 sing N N 278 LYS CD CE sing N N 279 LYS CD HD2 sing N N 280 LYS CD HD3 sing N N 281 LYS CE NZ sing N N 282 LYS CE HE2 sing N N 283 LYS CE HE3 sing N N 284 LYS NZ HZ1 sing N N 285 LYS NZ HZ2 sing N N 286 LYS NZ HZ3 sing N N 287 LYS OXT HXT sing N N 288 MET N CA sing N N 289 MET N H sing N N 290 MET N H2 sing N N 291 MET CA C sing N N 292 MET CA CB sing N N 293 MET CA HA sing N N 294 MET C O doub N N 295 MET C OXT sing N N 296 MET CB CG sing N N 297 MET CB HB2 sing N N 298 MET CB HB3 sing N N 299 MET CG SD sing N N 300 MET CG HG2 sing N N 301 MET CG HG3 sing N N 302 MET SD CE sing N N 303 MET CE HE1 sing N N 304 MET CE HE2 sing N N 305 MET CE HE3 sing N N 306 MET OXT HXT sing N N 307 PHE N CA sing N N 308 PHE N H sing N N 309 PHE N H2 sing N N 310 PHE CA C sing N N 311 PHE CA CB sing N N 312 PHE CA HA sing N N 313 PHE C O doub N N 314 PHE C OXT sing N N 315 PHE CB CG sing N N 316 PHE CB HB2 sing N N 317 PHE CB HB3 sing N N 318 PHE CG CD1 doub Y N 319 PHE CG CD2 sing Y N 320 PHE CD1 CE1 sing Y N 321 PHE CD1 HD1 sing N N 322 PHE CD2 CE2 doub Y N 323 PHE CD2 HD2 sing N N 324 PHE CE1 CZ doub Y N 325 PHE CE1 HE1 sing N N 326 PHE CE2 CZ sing Y N 327 PHE CE2 HE2 sing N N 328 PHE CZ HZ sing N N 329 PHE OXT HXT sing N N 330 PRO N CA sing N N 331 PRO N CD sing N N 332 PRO N H sing N N 333 PRO CA C sing N N 334 PRO CA CB sing N N 335 PRO CA HA sing N N 336 PRO C O doub N N 337 PRO C OXT sing N N 338 PRO CB CG sing N N 339 PRO CB HB2 sing N N 340 PRO CB HB3 sing N N 341 PRO CG CD sing N N 342 PRO CG HG2 sing N N 343 PRO CG HG3 sing N N 344 PRO CD HD2 sing N N 345 PRO CD HD3 sing N N 346 PRO OXT HXT sing N N 347 SER N CA sing N N 348 SER N H sing N N 349 SER N H2 sing N N 350 SER CA C sing N N 351 SER CA CB sing N N 352 SER CA HA sing N N 353 SER C O doub N N 354 SER C OXT sing N N 355 SER CB OG sing N N 356 SER CB HB2 sing N N 357 SER CB HB3 sing N N 358 SER OG HG sing N N 359 SER OXT HXT sing N N 360 THR N CA sing N N 361 THR N H sing N N 362 THR N H2 sing N N 363 THR CA C sing N N 364 THR CA CB sing N N 365 THR CA HA sing N N 366 THR C O doub N N 367 THR C OXT sing N N 368 THR CB OG1 sing N N 369 THR CB CG2 sing N N 370 THR CB HB sing N N 371 THR OG1 HG1 sing N N 372 THR CG2 HG21 sing N N 373 THR CG2 HG22 sing N N 374 THR CG2 HG23 sing N N 375 THR OXT HXT sing N N 376 TRP N CA sing N N 377 TRP N H sing N N 378 TRP N H2 sing N N 379 TRP CA C sing N N 380 TRP CA CB sing N N 381 TRP CA HA sing N N 382 TRP C O doub N N 383 TRP C OXT sing N N 384 TRP CB CG sing N N 385 TRP CB HB2 sing N N 386 TRP CB HB3 sing N N 387 TRP CG CD1 doub Y N 388 TRP CG CD2 sing Y N 389 TRP CD1 NE1 sing Y N 390 TRP CD1 HD1 sing N N 391 TRP CD2 CE2 doub Y N 392 TRP CD2 CE3 sing Y N 393 TRP NE1 CE2 sing Y N 394 TRP NE1 HE1 sing N N 395 TRP CE2 CZ2 sing Y N 396 TRP CE3 CZ3 doub Y N 397 TRP CE3 HE3 sing N N 398 TRP CZ2 CH2 doub Y N 399 TRP CZ2 HZ2 sing N N 400 TRP CZ3 CH2 sing Y N 401 TRP CZ3 HZ3 sing N N 402 TRP CH2 HH2 sing N N 403 TRP OXT HXT sing N N 404 TYR N CA sing N N 405 TYR N H sing N N 406 TYR N H2 sing N N 407 TYR CA C sing N N 408 TYR CA CB sing N N 409 TYR CA HA sing N N 410 TYR C O doub N N 411 TYR C OXT sing N N 412 TYR CB CG sing N N 413 TYR CB HB2 sing N N 414 TYR CB HB3 sing N N 415 TYR CG CD1 doub Y N 416 TYR CG CD2 sing Y N 417 TYR CD1 CE1 sing Y N 418 TYR CD1 HD1 sing N N 419 TYR CD2 CE2 doub Y N 420 TYR CD2 HD2 sing N N 421 TYR CE1 CZ doub Y N 422 TYR CE1 HE1 sing N N 423 TYR CE2 CZ sing Y N 424 TYR CE2 HE2 sing N N 425 TYR CZ OH sing N N 426 TYR OH HH sing N N 427 TYR OXT HXT sing N N 428 VAL N CA sing N N 429 VAL N H sing N N 430 VAL N H2 sing N N 431 VAL CA C sing N N 432 VAL CA CB sing N N 433 VAL CA HA sing N N 434 VAL C O doub N N 435 VAL C OXT sing N N 436 VAL CB CG1 sing N N 437 VAL CB CG2 sing N N 438 VAL CB HB sing N N 439 VAL CG1 HG11 sing N N 440 VAL CG1 HG12 sing N N 441 VAL CG1 HG13 sing N N 442 VAL CG2 HG21 sing N N 443 VAL CG2 HG22 sing N N 444 VAL CG2 HG23 sing N N 445 VAL OXT HXT sing N N 446 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #