data_3OFH # _entry.id 3OFH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3OFH RCSB RCSB061049 WWPDB D_1000061049 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3OFE Ortholog unspecified PDB 3OFF Ortholog unspecified PDB 3OFG Ortholog unspecified PDB 2I9S 'NMR solution structure of Mesd structure domain' unspecified PDB 2RQK 'NMR solution structure of Mesd' unspecified PDB 2RQM 'NMR solution structure of Mesd' unspecified # _pdbx_database_status.entry_id 3OFH _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-08-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Collins, M.N.' 1 'Hendrickson, W.A.' 2 # _citation.id primary _citation.title 'Structural Characterization of the Boca/Mesd Maturation Factors for LDL-Receptor-Type beta-Propeller Domains' _citation.journal_abbrev Structure _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Collins, M.N.' 1 primary 'Hendrickson, W.A.' 2 # _cell.length_a 71.651 _cell.length_b 71.651 _cell.length_c 37.102 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3OFH _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43' _symmetry.entry_id 3OFH _symmetry.Int_Tables_number 78 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LDLR chaperone MESD' 10100.413 2 ? ? 'Structured core residues 98-183' ? 2 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mesoderm development protein, Mesoderm development candidate 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLFNANYDVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEV TLEGQMYPG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLFNANYDVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEV TLEGQMYPG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 LYS n 1 7 LYS n 1 8 GLY n 1 9 LYS n 1 10 THR n 1 11 LEU n 1 12 MET n 1 13 MET n 1 14 PHE n 1 15 VAL n 1 16 THR n 1 17 VAL n 1 18 SER n 1 19 GLY n 1 20 ASN n 1 21 PRO n 1 22 THR n 1 23 GLU n 1 24 LYS n 1 25 GLU n 1 26 THR n 1 27 GLU n 1 28 GLU n 1 29 ILE n 1 30 THR n 1 31 SER n 1 32 LEU n 1 33 TRP n 1 34 GLN n 1 35 GLY n 1 36 SER n 1 37 LEU n 1 38 PHE n 1 39 ASN n 1 40 ALA n 1 41 ASN n 1 42 TYR n 1 43 ASP n 1 44 VAL n 1 45 GLN n 1 46 ARG n 1 47 PHE n 1 48 ILE n 1 49 VAL n 1 50 GLY n 1 51 SER n 1 52 ASP n 1 53 ARG n 1 54 ALA n 1 55 ILE n 1 56 PHE n 1 57 MET n 1 58 LEU n 1 59 ARG n 1 60 ASP n 1 61 GLY n 1 62 SER n 1 63 TYR n 1 64 ALA n 1 65 TRP n 1 66 GLU n 1 67 ILE n 1 68 LYS n 1 69 ASP n 1 70 PHE n 1 71 LEU n 1 72 VAL n 1 73 SER n 1 74 GLN n 1 75 ASP n 1 76 ARG n 1 77 CYS n 1 78 ALA n 1 79 GLU n 1 80 VAL n 1 81 THR n 1 82 LEU n 1 83 GLU n 1 84 GLY n 1 85 GLN n 1 86 MET n 1 87 TYR n 1 88 PRO n 1 89 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Mesd, Mesdc2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MESD_MOUSE _struct_ref.pdbx_db_accession Q9ERE7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLFNANYDVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEVTLE GQMYPG ; _struct_ref.pdbx_align_begin 98 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OFH A 4 ? 89 ? Q9ERE7 98 ? 183 ? 98 183 2 1 3OFH B 4 ? 89 ? Q9ERE7 98 ? 183 ? 98 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OFH GLY A 1 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 95 1 1 3OFH SER A 2 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 96 2 1 3OFH HIS A 3 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 97 3 2 3OFH GLY B 1 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 95 4 2 3OFH SER B 2 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 96 5 2 3OFH HIS B 3 ? UNP Q9ERE7 ? ? 'EXPRESSION TAG' 97 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3OFH _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.7-0.9M AmPO4 and 100mM Hepes pH7.5, streak seeded with micro-crystals, vapor diffusion, hanging drop, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2007-04-24 _diffrn_detector.details 'monochromator + mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator SILICON _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9790 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_wavelength_list 0.9790 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C # _reflns.entry_id 3OFH _reflns.d_resolution_high 2.010 _reflns.d_resolution_low 30.000 _reflns.number_obs 12634 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_netI_over_sigmaI 23.100 _reflns.pdbx_chi_squared 1.035 _reflns.pdbx_redundancy 3.800 _reflns.percent_possible_obs 99.000 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 12762 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.010 2.080 ? ? ? 0.148 ? ? 1.051 3.300 ? 1223 96.400 ? 1 2.080 2.170 ? ? ? 0.112 ? ? 1.080 3.900 ? 1277 100.000 ? 2 2.170 2.260 ? ? ? 0.096 ? ? 1.022 3.900 ? 1238 100.000 ? 3 2.260 2.380 ? ? ? 0.088 ? ? 1.019 3.900 ? 1283 100.000 ? 4 2.380 2.530 ? ? ? 0.071 ? ? 1.056 3.900 ? 1251 99.800 ? 5 2.530 2.730 ? ? ? 0.057 ? ? 1.017 3.900 ? 1262 99.900 ? 6 2.730 3.000 ? ? ? 0.046 ? ? 1.009 3.900 ? 1277 99.800 ? 7 3.000 3.440 ? ? ? 0.034 ? ? 1.022 3.700 ? 1259 99.400 ? 8 3.440 4.330 ? ? ? 0.026 ? ? 1.047 3.600 ? 1278 98.800 ? 9 4.330 30.000 ? ? ? 0.023 ? ? 1.028 3.500 ? 1286 96.300 ? 10 # _refine.entry_id 3OFH _refine.ls_d_res_high 2.0130 _refine.ls_d_res_low 29.9340 _refine.pdbx_ls_sigma_F 0.180 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.9200 _refine.ls_number_reflns_obs 12606 _refine.ls_number_reflns_all 12744 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details 'random, free and work reflections are not related by a twin law' _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1502 _refine.ls_R_factor_R_work 0.1474 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1744 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.1000 _refine.ls_number_reflns_R_free 1273 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.7918 _refine.solvent_model_param_bsol 49.8190 _refine.solvent_model_param_ksol 0.3870 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.1182 _refine.aniso_B[2][2] -2.1182 _refine.aniso_B[3][3] 1.3349 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 174.670 _refine.B_iso_min 11.400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.340 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 21.37 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1282 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1390 _refine_hist.d_res_high 2.0130 _refine_hist.d_res_low 29.9340 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1320 0.003 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 1788 0.563 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 198 0.035 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 229 0.002 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 465 13.767 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.0127 2.1388 6 98.0000 1849 . 0.1887 0.2117 . 207 . 2056 . . 'X-RAY DIFFRACTION' 2.1388 2.3039 6 98.0000 1894 . 0.1783 0.1873 . 215 . 2109 . . 'X-RAY DIFFRACTION' 2.3039 2.5356 6 98.0000 1883 . 0.1831 0.2288 . 206 . 2089 . . 'X-RAY DIFFRACTION' 2.5356 2.9023 6 98.0000 1897 . 0.1624 0.2217 . 212 . 2109 . . 'X-RAY DIFFRACTION' 2.9023 3.6555 6 98.0000 1906 . 0.1324 0.1538 . 214 . 2120 . . 'X-RAY DIFFRACTION' 3.6555 29.9373 6 98.0000 1911 . 0.1216 0.1425 . 212 . 2123 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3OFH _struct.title 'Structured Domain of Mus musculus Mesd' _struct.pdbx_descriptor 'LDLR chaperone MESD' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OFH _struct_keywords.text 'mesd, molecular chaperone, protein folding, YWTD propeller, LRP, CHAPERONE' _struct_keywords.pdbx_keywords CHAPERONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? ALA A 40 ? THR A 116 ALA A 134 1 ? 19 HELX_P HELX_P2 2 ASP A 60 ? SER A 62 ? ASP A 154 SER A 156 5 ? 3 HELX_P HELX_P3 3 TYR A 63 ? SER A 73 ? TYR A 157 SER A 167 1 ? 11 HELX_P HELX_P4 4 THR B 22 ? ALA B 40 ? THR B 116 ALA B 134 1 ? 19 HELX_P HELX_P5 5 TYR B 63 ? SER B 73 ? TYR B 157 SER B 167 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 87 A . ? TYR 181 A PRO 88 A ? PRO 182 A 1 5.46 2 PRO 88 A . ? PRO 182 A GLY 89 A ? GLY 183 A 1 6.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 44 ? ILE A 48 ? VAL A 138 ILE A 142 A 2 ARG A 53 ? LEU A 58 ? ARG A 147 LEU A 152 A 3 LEU A 11 ? VAL A 17 ? LEU A 105 VAL A 111 A 4 CYS A 77 ? LEU A 82 ? CYS A 171 LEU A 176 A 5 GLN A 85 ? TYR A 87 ? GLN A 179 TYR A 181 B 1 VAL B 44 ? ILE B 48 ? VAL B 138 ILE B 142 B 2 ARG B 53 ? LEU B 58 ? ARG B 147 LEU B 152 B 3 LEU B 11 ? VAL B 17 ? LEU B 105 VAL B 111 B 4 CYS B 77 ? LEU B 82 ? CYS B 171 LEU B 176 B 5 GLN B 85 ? TYR B 87 ? GLN B 179 TYR B 181 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 47 ? N PHE A 141 O ILE A 55 ? O ILE A 149 A 2 3 O PHE A 56 ? O PHE A 150 N MET A 13 ? N MET A 107 A 3 4 N PHE A 14 ? N PHE A 108 O THR A 81 ? O THR A 175 A 4 5 N LEU A 82 ? N LEU A 176 O GLN A 85 ? O GLN A 179 B 1 2 N GLN B 45 ? N GLN B 139 O MET B 57 ? O MET B 151 B 2 3 O LEU B 58 ? O LEU B 152 N LEU B 11 ? N LEU B 105 B 3 4 N THR B 16 ? N THR B 110 O ALA B 78 ? O ALA B 172 B 4 5 N VAL B 80 ? N VAL B 174 O TYR B 87 ? O TYR B 181 # _atom_sites.entry_id 3OFH _atom_sites.fract_transf_matrix[1][1] 0.013957 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013957 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026953 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 95 ? ? ? A . n A 1 2 SER 2 96 ? ? ? A . n A 1 3 HIS 3 97 ? ? ? A . n A 1 4 MET 4 98 98 MET MET A . n A 1 5 THR 5 99 99 THR THR A . n A 1 6 LYS 6 100 100 LYS LYS A . n A 1 7 LYS 7 101 101 LYS LYS A . n A 1 8 GLY 8 102 102 GLY GLY A . n A 1 9 LYS 9 103 103 LYS LYS A . n A 1 10 THR 10 104 104 THR THR A . n A 1 11 LEU 11 105 105 LEU LEU A . n A 1 12 MET 12 106 106 MET MET A . n A 1 13 MET 13 107 107 MET MET A . n A 1 14 PHE 14 108 108 PHE PHE A . n A 1 15 VAL 15 109 109 VAL VAL A . n A 1 16 THR 16 110 110 THR THR A . n A 1 17 VAL 17 111 111 VAL VAL A . n A 1 18 SER 18 112 112 SER SER A . n A 1 19 GLY 19 113 113 GLY GLY A . n A 1 20 ASN 20 114 114 ASN ASN A . n A 1 21 PRO 21 115 115 PRO PRO A . n A 1 22 THR 22 116 116 THR THR A . n A 1 23 GLU 23 117 117 GLU GLU A . n A 1 24 LYS 24 118 118 LYS LYS A . n A 1 25 GLU 25 119 119 GLU GLU A . n A 1 26 THR 26 120 120 THR THR A . n A 1 27 GLU 27 121 121 GLU GLU A . n A 1 28 GLU 28 122 122 GLU GLU A . n A 1 29 ILE 29 123 123 ILE ILE A . n A 1 30 THR 30 124 124 THR THR A . n A 1 31 SER 31 125 125 SER SER A . n A 1 32 LEU 32 126 126 LEU LEU A . n A 1 33 TRP 33 127 127 TRP TRP A . n A 1 34 GLN 34 128 128 GLN GLN A . n A 1 35 GLY 35 129 129 GLY GLY A . n A 1 36 SER 36 130 130 SER SER A . n A 1 37 LEU 37 131 131 LEU LEU A . n A 1 38 PHE 38 132 132 PHE PHE A . n A 1 39 ASN 39 133 133 ASN ASN A . n A 1 40 ALA 40 134 134 ALA ALA A . n A 1 41 ASN 41 135 135 ASN ASN A . n A 1 42 TYR 42 136 136 TYR TYR A . n A 1 43 ASP 43 137 137 ASP ASP A . n A 1 44 VAL 44 138 138 VAL VAL A . n A 1 45 GLN 45 139 139 GLN GLN A . n A 1 46 ARG 46 140 140 ARG ARG A . n A 1 47 PHE 47 141 141 PHE PHE A . n A 1 48 ILE 48 142 142 ILE ILE A . n A 1 49 VAL 49 143 143 VAL VAL A . n A 1 50 GLY 50 144 144 GLY GLY A . n A 1 51 SER 51 145 145 SER SER A . n A 1 52 ASP 52 146 146 ASP ASP A . n A 1 53 ARG 53 147 147 ARG ARG A . n A 1 54 ALA 54 148 148 ALA ALA A . n A 1 55 ILE 55 149 149 ILE ILE A . n A 1 56 PHE 56 150 150 PHE PHE A . n A 1 57 MET 57 151 151 MET MET A . n A 1 58 LEU 58 152 152 LEU LEU A . n A 1 59 ARG 59 153 153 ARG ARG A . n A 1 60 ASP 60 154 154 ASP ASP A . n A 1 61 GLY 61 155 155 GLY GLY A . n A 1 62 SER 62 156 156 SER SER A . n A 1 63 TYR 63 157 157 TYR TYR A . n A 1 64 ALA 64 158 158 ALA ALA A . n A 1 65 TRP 65 159 159 TRP TRP A . n A 1 66 GLU 66 160 160 GLU GLU A . n A 1 67 ILE 67 161 161 ILE ILE A . n A 1 68 LYS 68 162 162 LYS LYS A . n A 1 69 ASP 69 163 163 ASP ASP A . n A 1 70 PHE 70 164 164 PHE PHE A . n A 1 71 LEU 71 165 165 LEU LEU A . n A 1 72 VAL 72 166 166 VAL VAL A . n A 1 73 SER 73 167 167 SER SER A . n A 1 74 GLN 74 168 168 GLN GLN A . n A 1 75 ASP 75 169 169 ASP ASP A . n A 1 76 ARG 76 170 170 ARG ARG A . n A 1 77 CYS 77 171 171 CYS CYS A . n A 1 78 ALA 78 172 172 ALA ALA A . n A 1 79 GLU 79 173 173 GLU GLU A . n A 1 80 VAL 80 174 174 VAL VAL A . n A 1 81 THR 81 175 175 THR THR A . n A 1 82 LEU 82 176 176 LEU LEU A . n A 1 83 GLU 83 177 177 GLU GLU A . n A 1 84 GLY 84 178 178 GLY GLY A . n A 1 85 GLN 85 179 179 GLN GLN A . n A 1 86 MET 86 180 180 MET MET A . n A 1 87 TYR 87 181 181 TYR TYR A . n A 1 88 PRO 88 182 182 PRO PRO A . n A 1 89 GLY 89 183 183 GLY GLY A . n B 1 1 GLY 1 95 ? ? ? B . n B 1 2 SER 2 96 ? ? ? B . n B 1 3 HIS 3 97 ? ? ? B . n B 1 4 MET 4 98 ? ? ? B . n B 1 5 THR 5 99 ? ? ? B . n B 1 6 LYS 6 100 ? ? ? B . n B 1 7 LYS 7 101 ? ? ? B . n B 1 8 GLY 8 102 ? ? ? B . n B 1 9 LYS 9 103 103 LYS LYS B . n B 1 10 THR 10 104 104 THR THR B . n B 1 11 LEU 11 105 105 LEU LEU B . n B 1 12 MET 12 106 106 MET MET B . n B 1 13 MET 13 107 107 MET MET B . n B 1 14 PHE 14 108 108 PHE PHE B . n B 1 15 VAL 15 109 109 VAL VAL B . n B 1 16 THR 16 110 110 THR THR B . n B 1 17 VAL 17 111 111 VAL VAL B . n B 1 18 SER 18 112 112 SER SER B . n B 1 19 GLY 19 113 113 GLY GLY B . n B 1 20 ASN 20 114 114 ASN ASN B . n B 1 21 PRO 21 115 115 PRO PRO B . n B 1 22 THR 22 116 116 THR THR B . n B 1 23 GLU 23 117 117 GLU GLU B . n B 1 24 LYS 24 118 118 LYS LYS B . n B 1 25 GLU 25 119 119 GLU GLU B . n B 1 26 THR 26 120 120 THR THR B . n B 1 27 GLU 27 121 121 GLU GLU B . n B 1 28 GLU 28 122 122 GLU GLU B . n B 1 29 ILE 29 123 123 ILE ILE B . n B 1 30 THR 30 124 124 THR THR B . n B 1 31 SER 31 125 125 SER SER B . n B 1 32 LEU 32 126 126 LEU LEU B . n B 1 33 TRP 33 127 127 TRP TRP B . n B 1 34 GLN 34 128 128 GLN GLN B . n B 1 35 GLY 35 129 129 GLY GLY B . n B 1 36 SER 36 130 130 SER SER B . n B 1 37 LEU 37 131 131 LEU LEU B . n B 1 38 PHE 38 132 132 PHE PHE B . n B 1 39 ASN 39 133 133 ASN ASN B . n B 1 40 ALA 40 134 134 ALA ALA B . n B 1 41 ASN 41 135 135 ASN ASN B . n B 1 42 TYR 42 136 136 TYR TYR B . n B 1 43 ASP 43 137 137 ASP ASP B . n B 1 44 VAL 44 138 138 VAL VAL B . n B 1 45 GLN 45 139 139 GLN GLN B . n B 1 46 ARG 46 140 140 ARG ARG B . n B 1 47 PHE 47 141 141 PHE PHE B . n B 1 48 ILE 48 142 142 ILE ILE B . n B 1 49 VAL 49 143 143 VAL VAL B . n B 1 50 GLY 50 144 144 GLY GLY B . n B 1 51 SER 51 145 145 SER SER B . n B 1 52 ASP 52 146 146 ASP ASP B . n B 1 53 ARG 53 147 147 ARG ARG B . n B 1 54 ALA 54 148 148 ALA ALA B . n B 1 55 ILE 55 149 149 ILE ILE B . n B 1 56 PHE 56 150 150 PHE PHE B . n B 1 57 MET 57 151 151 MET MET B . n B 1 58 LEU 58 152 152 LEU LEU B . n B 1 59 ARG 59 153 153 ARG ARG B . n B 1 60 ASP 60 154 154 ASP ASP B . n B 1 61 GLY 61 155 155 GLY GLY B . n B 1 62 SER 62 156 156 SER SER B . n B 1 63 TYR 63 157 157 TYR TYR B . n B 1 64 ALA 64 158 158 ALA ALA B . n B 1 65 TRP 65 159 159 TRP TRP B . n B 1 66 GLU 66 160 160 GLU GLU B . n B 1 67 ILE 67 161 161 ILE ILE B . n B 1 68 LYS 68 162 162 LYS LYS B . n B 1 69 ASP 69 163 163 ASP ASP B . n B 1 70 PHE 70 164 164 PHE PHE B . n B 1 71 LEU 71 165 165 LEU LEU B . n B 1 72 VAL 72 166 166 VAL VAL B . n B 1 73 SER 73 167 167 SER SER B . n B 1 74 GLN 74 168 168 GLN GLN B . n B 1 75 ASP 75 169 169 ASP ASP B . n B 1 76 ARG 76 170 170 ARG ARG B . n B 1 77 CYS 77 171 171 CYS CYS B . n B 1 78 ALA 78 172 172 ALA ALA B . n B 1 79 GLU 79 173 173 GLU GLU B . n B 1 80 VAL 80 174 174 VAL VAL B . n B 1 81 THR 81 175 175 THR THR B . n B 1 82 LEU 82 176 176 LEU LEU B . n B 1 83 GLU 83 177 177 GLU GLU B . n B 1 84 GLY 84 178 178 GLY GLY B . n B 1 85 GLN 85 179 179 GLN GLN B . n B 1 86 MET 86 180 180 MET MET B . n B 1 87 TYR 87 181 181 TYR TYR B . n B 1 88 PRO 88 182 ? ? ? B . n B 1 89 GLY 89 183 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1 1 HOH HOH A . C 2 HOH 2 2 2 HOH HOH A . C 2 HOH 3 4 4 HOH HOH A . C 2 HOH 4 6 6 HOH HOH A . C 2 HOH 5 7 7 HOH HOH A . C 2 HOH 6 8 8 HOH HOH A . C 2 HOH 7 10 10 HOH HOH A . C 2 HOH 8 11 11 HOH HOH A . C 2 HOH 9 12 12 HOH HOH A . C 2 HOH 10 15 15 HOH HOH A . C 2 HOH 11 16 16 HOH HOH A . C 2 HOH 12 19 19 HOH HOH A . C 2 HOH 13 20 20 HOH HOH A . C 2 HOH 14 21 21 HOH HOH A . C 2 HOH 15 25 25 HOH HOH A . C 2 HOH 16 26 26 HOH HOH A . C 2 HOH 17 28 28 HOH HOH A . C 2 HOH 18 35 35 HOH HOH A . C 2 HOH 19 37 37 HOH HOH A . C 2 HOH 20 39 39 HOH HOH A . C 2 HOH 21 40 40 HOH HOH A . C 2 HOH 22 41 41 HOH HOH A . C 2 HOH 23 45 45 HOH HOH A . C 2 HOH 24 46 46 HOH HOH A . C 2 HOH 25 50 50 HOH HOH A . C 2 HOH 26 52 52 HOH HOH A . C 2 HOH 27 56 56 HOH HOH A . C 2 HOH 28 57 57 HOH HOH A . C 2 HOH 29 60 60 HOH HOH A . C 2 HOH 30 61 61 HOH HOH A . C 2 HOH 31 63 63 HOH HOH A . C 2 HOH 32 71 71 HOH HOH A . C 2 HOH 33 73 73 HOH HOH A . C 2 HOH 34 74 74 HOH HOH A . C 2 HOH 35 75 75 HOH HOH A . C 2 HOH 36 77 77 HOH HOH A . C 2 HOH 37 83 83 HOH HOH A . C 2 HOH 38 85 85 HOH HOH A . C 2 HOH 39 90 90 HOH HOH A . C 2 HOH 40 92 92 HOH HOH A . C 2 HOH 41 93 93 HOH HOH A . C 2 HOH 42 184 101 HOH HOH A . C 2 HOH 43 185 108 HOH HOH A . C 2 HOH 44 186 110 HOH HOH A . C 2 HOH 45 187 113 HOH HOH A . C 2 HOH 46 188 115 HOH HOH A . C 2 HOH 47 189 116 HOH HOH A . C 2 HOH 48 190 117 HOH HOH A . C 2 HOH 49 191 118 HOH HOH A . C 2 HOH 50 192 123 HOH HOH A . C 2 HOH 51 193 126 HOH HOH A . C 2 HOH 52 194 131 HOH HOH A . C 2 HOH 53 195 132 HOH HOH A . C 2 HOH 54 196 136 HOH HOH A . C 2 HOH 55 205 205 HOH HOH A . C 2 HOH 56 206 206 HOH HOH A . C 2 HOH 57 207 207 HOH HOH A . C 2 HOH 58 209 209 HOH HOH A . C 2 HOH 59 210 210 HOH HOH A . C 2 HOH 60 211 211 HOH HOH A . C 2 HOH 61 212 212 HOH HOH A . D 2 HOH 1 3 3 HOH HOH B . D 2 HOH 2 5 5 HOH HOH B . D 2 HOH 3 9 9 HOH HOH B . D 2 HOH 4 13 13 HOH HOH B . D 2 HOH 5 14 14 HOH HOH B . D 2 HOH 6 18 18 HOH HOH B . D 2 HOH 7 22 22 HOH HOH B . D 2 HOH 8 23 23 HOH HOH B . D 2 HOH 9 24 24 HOH HOH B . D 2 HOH 10 29 29 HOH HOH B . D 2 HOH 11 30 30 HOH HOH B . D 2 HOH 12 31 31 HOH HOH B . D 2 HOH 13 32 32 HOH HOH B . D 2 HOH 14 34 34 HOH HOH B . D 2 HOH 15 36 36 HOH HOH B . D 2 HOH 16 38 38 HOH HOH B . D 2 HOH 17 42 42 HOH HOH B . D 2 HOH 18 43 43 HOH HOH B . D 2 HOH 19 44 44 HOH HOH B . D 2 HOH 20 47 47 HOH HOH B . D 2 HOH 21 49 49 HOH HOH B . D 2 HOH 22 51 51 HOH HOH B . D 2 HOH 23 53 53 HOH HOH B . D 2 HOH 24 55 55 HOH HOH B . D 2 HOH 25 76 76 HOH HOH B . D 2 HOH 26 79 79 HOH HOH B . D 2 HOH 27 80 80 HOH HOH B . D 2 HOH 28 87 87 HOH HOH B . D 2 HOH 29 88 88 HOH HOH B . D 2 HOH 30 89 89 HOH HOH B . D 2 HOH 31 91 91 HOH HOH B . D 2 HOH 32 184 105 HOH HOH B . D 2 HOH 33 185 109 HOH HOH B . D 2 HOH 34 186 111 HOH HOH B . D 2 HOH 35 187 112 HOH HOH B . D 2 HOH 36 188 114 HOH HOH B . D 2 HOH 37 189 119 HOH HOH B . D 2 HOH 38 190 120 HOH HOH B . D 2 HOH 39 191 122 HOH HOH B . D 2 HOH 40 192 125 HOH HOH B . D 2 HOH 41 193 127 HOH HOH B . D 2 HOH 42 194 129 HOH HOH B . D 2 HOH 43 195 134 HOH HOH B . D 2 HOH 44 196 135 HOH HOH B . D 2 HOH 45 201 201 HOH HOH B . D 2 HOH 46 202 202 HOH HOH B . D 2 HOH 47 203 203 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D 3 1 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 800 ? 3 MORE -11 ? 3 'SSA (A^2)' 8970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 22.4277 6.0224 -2.7908 0.0297 0.0731 0.0665 0.0055 0.0124 -0.0419 0.0208 0.5670 1.6846 0.3211 -0.1390 -0.7939 0.0158 -0.0378 0.0156 -0.1290 0.0154 -0.0773 -0.0889 0.1304 0.0525 'X-RAY DIFFRACTION' 2 ? refined 24.8114 -8.7399 11.6679 0.0475 0.1056 0.0503 -0.0534 -0.0019 -0.0043 0.7655 0.9172 0.4013 0.6075 0.4333 -0.1199 0.1232 -0.1380 0.0235 0.2037 0.0091 -0.0212 0.0879 -0.0233 0.1368 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 98 A 183 'chain A' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 103 B 181 'chain B' ? ? ? ? ? # _pdbx_phasing_MR.entry_id 3OFH _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 29.930 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 29.930 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 1.3.1 '1 July 2005' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345 software ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 103 ? CD ? A LYS 9 CD 2 1 Y 1 A LYS 103 ? CE ? A LYS 9 CE 3 1 Y 1 A LYS 103 ? NZ ? A LYS 9 NZ 4 1 Y 1 A ASN 114 ? OD1 ? A ASN 20 OD1 5 1 Y 1 A ASN 114 ? ND2 ? A ASN 20 ND2 6 1 Y 1 A LYS 118 ? CE ? A LYS 24 CE 7 1 Y 1 A LYS 118 ? NZ ? A LYS 24 NZ 8 1 Y 1 A ARG 147 ? NE ? A ARG 53 NE 9 1 Y 1 A ARG 147 ? CZ ? A ARG 53 CZ 10 1 Y 1 A ARG 147 ? NH1 ? A ARG 53 NH1 11 1 Y 1 A ARG 147 ? NH2 ? A ARG 53 NH2 12 1 Y 1 A ARG 153 ? CD ? A ARG 59 CD 13 1 Y 1 A ARG 153 ? NE ? A ARG 59 NE 14 1 Y 1 A ARG 153 ? CZ ? A ARG 59 CZ 15 1 Y 1 A ARG 153 ? NH1 ? A ARG 59 NH1 16 1 Y 1 A ARG 153 ? NH2 ? A ARG 59 NH2 17 1 Y 1 A GLN 179 ? CG ? A GLN 85 CG 18 1 Y 1 A GLN 179 ? CD ? A GLN 85 CD 19 1 Y 1 A GLN 179 ? OE1 ? A GLN 85 OE1 20 1 Y 1 A GLN 179 ? NE2 ? A GLN 85 NE2 21 1 Y 1 B LYS 103 ? CB ? B LYS 9 CB 22 1 Y 1 B LYS 103 ? CG ? B LYS 9 CG 23 1 Y 1 B LYS 103 ? CD ? B LYS 9 CD 24 1 Y 1 B LYS 103 ? CE ? B LYS 9 CE 25 1 Y 1 B LYS 103 ? NZ ? B LYS 9 NZ 26 1 Y 1 B LEU 105 ? CD1 ? B LEU 11 CD1 27 1 Y 1 B LEU 105 ? CD2 ? B LEU 11 CD2 28 1 Y 1 B LYS 118 ? CD ? B LYS 24 CD 29 1 Y 1 B LYS 118 ? CE ? B LYS 24 CE 30 1 Y 1 B LYS 118 ? NZ ? B LYS 24 NZ 31 1 Y 1 B ASN 135 ? CG ? B ASN 41 CG 32 1 Y 1 B ASN 135 ? OD1 ? B ASN 41 OD1 33 1 Y 1 B ASN 135 ? ND2 ? B ASN 41 ND2 34 1 Y 1 B ARG 153 ? CG ? B ARG 59 CG 35 1 Y 1 B ARG 153 ? CD ? B ARG 59 CD 36 1 Y 1 B ARG 153 ? NE ? B ARG 59 NE 37 1 Y 1 B ARG 153 ? CZ ? B ARG 59 CZ 38 1 Y 1 B ARG 153 ? NH1 ? B ARG 59 NH1 39 1 Y 1 B ARG 153 ? NH2 ? B ARG 59 NH2 40 1 Y 1 B GLN 179 ? CG ? B GLN 85 CG 41 1 Y 1 B GLN 179 ? CD ? B GLN 85 CD 42 1 Y 1 B GLN 179 ? OE1 ? B GLN 85 OE1 43 1 Y 1 B GLN 179 ? NE2 ? B GLN 85 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 95 ? A GLY 1 2 1 Y 1 A SER 96 ? A SER 2 3 1 Y 1 A HIS 97 ? A HIS 3 4 1 Y 1 B GLY 95 ? B GLY 1 5 1 Y 1 B SER 96 ? B SER 2 6 1 Y 1 B HIS 97 ? B HIS 3 7 1 Y 1 B MET 98 ? B MET 4 8 1 Y 1 B THR 99 ? B THR 5 9 1 Y 1 B LYS 100 ? B LYS 6 10 1 Y 1 B LYS 101 ? B LYS 7 11 1 Y 1 B GLY 102 ? B GLY 8 12 1 Y 1 B PRO 182 ? B PRO 88 13 1 Y 1 B GLY 183 ? B GLY 89 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.fraction 0.246 _pdbx_reflns_twin.operator h,-k,-l _pdbx_reflns_twin.type ? _pdbx_reflns_twin.mean_F_square_over_mean_F2 ? _pdbx_reflns_twin.mean_I2_over_mean_I_square ? #