data_3OGQ # _entry.id 3OGQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3OGQ RCSB RCSB061094 WWPDB D_1000061094 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1B11 'wild type FIV protease' unspecified PDB 2HAH '12s mutant of FIV protease' unspecified PDB 3OGP '6s-98S FIV Protease with Darunavir bound' unspecified # _pdbx_database_status.entry_id 3OGQ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-08-17 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lin, Y.-C.' 1 'Perryman, A.L.' 2 'Elder, J.H.' 3 'Stout, C.D.' 4 # _citation.id primary _citation.title 'Structural basis for drug and substrate specificity exhibited by FIV encoding a chimeric FIV/HIV protease.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 67 _citation.page_first 540 _citation.page_last 548 _citation.year 2011 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21636894 _citation.pdbx_database_id_DOI 10.1107/S0907444911011681 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lin, Y.C.' 1 primary 'Perryman, A.L.' 2 primary 'Olson, A.J.' 3 primary 'Torbett, B.E.' 4 primary 'Elder, J.H.' 5 primary 'Stout, C.D.' 6 # _cell.length_a 81.790 _cell.length_b 81.790 _cell.length_c 33.940 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3OGQ _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 31' _symmetry.entry_id 3OGQ _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 144 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FIV protease' 13228.286 2 3.4.23.- 'I37V, N55M, V59I, I98S, Q99V, P100N' 'UNP residues 39-154' ? 2 non-polymer syn ;N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE ; 628.801 1 ? ? ? ? 3 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 2 ? ? ? ? 4 water nat water 18.015 145 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protease, Retropepsin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;YNKVGTTTTLEKRPEILIFVNGYPIKFLLDTGADITVLNRRDFQVKNSIENGRQMMIGIGGGKRGTNYINVHLEIRDENY KTQCIFGNVCVLEDNSLSVNLLGRDNMIKFNIRLVM ; _entity_poly.pdbx_seq_one_letter_code_can ;YNKVGTTTTLEKRPEILIFVNGYPIKFLLDTGADITVLNRRDFQVKNSIENGRQMMIGIGGGKRGTNYINVHLEIRDENY KTQCIFGNVCVLEDNSLSVNLLGRDNMIKFNIRLVM ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 ASN n 1 3 LYS n 1 4 VAL n 1 5 GLY n 1 6 THR n 1 7 THR n 1 8 THR n 1 9 THR n 1 10 LEU n 1 11 GLU n 1 12 LYS n 1 13 ARG n 1 14 PRO n 1 15 GLU n 1 16 ILE n 1 17 LEU n 1 18 ILE n 1 19 PHE n 1 20 VAL n 1 21 ASN n 1 22 GLY n 1 23 TYR n 1 24 PRO n 1 25 ILE n 1 26 LYS n 1 27 PHE n 1 28 LEU n 1 29 LEU n 1 30 ASP n 1 31 THR n 1 32 GLY n 1 33 ALA n 1 34 ASP n 1 35 ILE n 1 36 THR n 1 37 VAL n 1 38 LEU n 1 39 ASN n 1 40 ARG n 1 41 ARG n 1 42 ASP n 1 43 PHE n 1 44 GLN n 1 45 VAL n 1 46 LYS n 1 47 ASN n 1 48 SER n 1 49 ILE n 1 50 GLU n 1 51 ASN n 1 52 GLY n 1 53 ARG n 1 54 GLN n 1 55 MET n 1 56 MET n 1 57 ILE n 1 58 GLY n 1 59 ILE n 1 60 GLY n 1 61 GLY n 1 62 GLY n 1 63 LYS n 1 64 ARG n 1 65 GLY n 1 66 THR n 1 67 ASN n 1 68 TYR n 1 69 ILE n 1 70 ASN n 1 71 VAL n 1 72 HIS n 1 73 LEU n 1 74 GLU n 1 75 ILE n 1 76 ARG n 1 77 ASP n 1 78 GLU n 1 79 ASN n 1 80 TYR n 1 81 LYS n 1 82 THR n 1 83 GLN n 1 84 CYS n 1 85 ILE n 1 86 PHE n 1 87 GLY n 1 88 ASN n 1 89 VAL n 1 90 CYS n 1 91 VAL n 1 92 LEU n 1 93 GLU n 1 94 ASP n 1 95 ASN n 1 96 SER n 1 97 LEU n 1 98 SER n 1 99 VAL n 1 100 ASN n 1 101 LEU n 1 102 LEU n 1 103 GLY n 1 104 ARG n 1 105 ASP n 1 106 ASN n 1 107 MET n 1 108 ILE n 1 109 LYS n 1 110 PHE n 1 111 ASN n 1 112 ILE n 1 113 ARG n 1 114 LEU n 1 115 VAL n 1 116 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name FIV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pol, PR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Feline immunodeficiency virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11673 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name FIV _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta(DE3)PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET-21A(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_FIVPE _struct_ref.pdbx_db_accession P16088 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YNKVGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENY KTQCIFGNVCVLEDNSLIQPLLGRDNMIKFNIRLVM ; _struct_ref.pdbx_align_begin 39 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OGQ A 1 ? 116 ? P16088 39 ? 154 ? 1 116 2 1 3OGQ B 1 ? 116 ? P16088 39 ? 154 ? 1 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OGQ VAL A 37 ? UNP P16088 ILE 75 'ENGINEERED MUTATION' 37 1 1 3OGQ MET A 55 ? UNP P16088 ASN 93 'ENGINEERED MUTATION' 55 2 1 3OGQ ILE A 59 ? UNP P16088 VAL 97 'ENGINEERED MUTATION' 59 3 1 3OGQ SER A 98 ? UNP P16088 ILE 136 'ENGINEERED MUTATION' 98 4 1 3OGQ VAL A 99 ? UNP P16088 GLN 137 'ENGINEERED MUTATION' 99 5 1 3OGQ ASN A 100 ? UNP P16088 PRO 138 'ENGINEERED MUTATION' 100 6 2 3OGQ VAL B 37 ? UNP P16088 ILE 75 'ENGINEERED MUTATION' 37 7 2 3OGQ MET B 55 ? UNP P16088 ASN 93 'ENGINEERED MUTATION' 55 8 2 3OGQ ILE B 59 ? UNP P16088 VAL 97 'ENGINEERED MUTATION' 59 9 2 3OGQ SER B 98 ? UNP P16088 ILE 136 'ENGINEERED MUTATION' 98 10 2 3OGQ VAL B 99 ? UNP P16088 GLN 137 'ENGINEERED MUTATION' 99 11 2 3OGQ ASN B 100 ? UNP P16088 PRO 138 'ENGINEERED MUTATION' 100 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AB1 non-polymer . ;N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE ; 'ABT-378, LOPINAVIR' 'C37 H48 N4 O5' 628.801 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3OGQ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARmosaic325 _diffrn_detector.pdbx_collection_date 2010-01-22 _diffrn_detector.details 'Rh coated flat mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Side scattering bent cube-root I-beam single crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97945 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 # _reflns.entry_id 3OGQ _reflns.observed_criterion_sigma_F 0.00 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 70.84 _reflns.number_all 21978 _reflns.number_obs 21978 _reflns.percent_possible_obs 93.5 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 10.9 _reflns.B_iso_Wilson_estimate 24.8 _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 84.9 _reflns_shell.Rmerge_I_obs 0.401 _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_Rsym_value 0.401 _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.number_unique_all 2912 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3OGQ _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 70.8400 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 93.4500 _refine.ls_number_reflns_obs 20791 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2276 _refine.ls_R_factor_R_work 0.2246 _refine.ls_wR_factor_R_work 0.2137 _refine.ls_R_factor_R_free 0.2794 _refine.ls_wR_factor_R_free 0.2686 _refine.ls_percent_reflns_R_free 5.4000 _refine.ls_number_reflns_R_free 1186 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 28.567 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 6.1400 _refine.aniso_B[2][2] 6.1400 _refine.aniso_B[3][3] -12.2800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9430 _refine.correlation_coeff_Fo_to_Fc_free 0.9210 _refine.overall_SU_R_Cruickshank_DPI 0.0356 _refine.overall_SU_R_free 0.0346 _refine.pdbx_overall_ESU_R_Free 0.0350 _refine.overall_SU_ML 0.1180 _refine.overall_SU_B 8.8970 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8133 _refine.B_iso_max 63.150 _refine.B_iso_min 2.800 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1778 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1977 _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 70.8400 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2124 0.012 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3226 1.408 1.977 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 444 7.122 7.500 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 88 31.912 24.318 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 344 18.676 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16 13.553 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 288 0.119 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2296 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1102 0.647 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1790 1.042 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 800 1.684 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 766 2.349 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.8000 _refine_ls_shell.d_res_low 1.8470 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 84.0000 _refine_ls_shell.number_reflns_R_work 1374 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3880 _refine_ls_shell.R_factor_R_free 0.4390 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1454 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OGQ _struct.title 'Crystal Structure of 6s-98S FIV Protease with Lopinavir bound' _struct.pdbx_descriptor 'FIV protease (E.C.3.4.23.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OGQ _struct_keywords.text 'aspartyl protease, HIV-like FIV chimera, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 41 ? PHE A 43 ? ARG A 41 PHE A 43 5 ? 3 HELX_P HELX_P2 2 GLY A 103 ? PHE A 110 ? GLY A 103 PHE A 110 1 ? 8 HELX_P HELX_P3 3 ARG B 41 ? PHE B 43 ? ARG B 41 PHE B 43 5 ? 3 HELX_P HELX_P4 4 GLY B 103 ? ASN B 111 ? GLY B 103 ASN B 111 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 80 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 80 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 LYS _struct_mon_prot_cis.pdbx_label_seq_id_2 81 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 81 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -20.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 7 ? THR A 8 ? THR A 7 THR A 8 A 2 ARG B 113 ? VAL B 115 ? ARG B 113 VAL B 115 A 3 ARG A 113 ? VAL A 115 ? ARG A 113 VAL A 115 B 1 ILE A 49 ? ILE A 57 ? ILE A 49 ILE A 57 B 2 GLY A 62 ? ILE A 75 ? GLY A 62 ILE A 75 B 3 GLN A 83 ? LEU A 92 ? GLN A 83 LEU A 92 B 4 VAL A 37 ? ASN A 39 ? VAL A 37 ASN A 39 B 5 ASN A 100 ? LEU A 102 ? ASN A 100 LEU A 102 B 6 TYR A 23 ? LEU A 29 ? TYR A 23 LEU A 29 B 7 GLU A 15 ? VAL A 20 ? GLU A 15 VAL A 20 B 8 GLY A 62 ? ILE A 75 ? GLY A 62 ILE A 75 C 1 ILE B 49 ? GLY B 58 ? ILE B 49 GLY B 58 C 2 GLY B 61 ? GLU B 74 ? GLY B 61 GLU B 74 C 3 CYS B 84 ? LEU B 92 ? CYS B 84 LEU B 92 C 4 VAL B 37 ? ASN B 39 ? VAL B 37 ASN B 39 C 5 ASN B 100 ? LEU B 102 ? ASN B 100 LEU B 102 C 6 TYR B 23 ? LEU B 29 ? TYR B 23 LEU B 29 C 7 GLU B 15 ? VAL B 20 ? GLU B 15 VAL B 20 C 8 GLY B 61 ? GLU B 74 ? GLY B 61 GLU B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 8 ? N THR A 8 O LEU B 114 ? O LEU B 114 A 2 3 O VAL B 115 ? O VAL B 115 N ARG A 113 ? N ARG A 113 B 1 2 N GLN A 54 ? N GLN A 54 O GLY A 65 ? O GLY A 65 B 2 3 N THR A 66 ? N THR A 66 O VAL A 91 ? O VAL A 91 B 3 4 O LEU A 92 ? O LEU A 92 N LEU A 38 ? N LEU A 38 B 4 5 N VAL A 37 ? N VAL A 37 O LEU A 101 ? O LEU A 101 B 5 6 O ASN A 100 ? O ASN A 100 N LEU A 28 ? N LEU A 28 B 6 7 O ILE A 25 ? O ILE A 25 N ILE A 18 ? N ILE A 18 B 7 8 N PHE A 19 ? N PHE A 19 O GLU A 74 ? O GLU A 74 C 1 2 N MET B 56 ? N MET B 56 O LYS B 63 ? O LYS B 63 C 2 3 N THR B 66 ? N THR B 66 O VAL B 91 ? O VAL B 91 C 3 4 O LEU B 92 ? O LEU B 92 N LEU B 38 ? N LEU B 38 C 4 5 N VAL B 37 ? N VAL B 37 O LEU B 101 ? O LEU B 101 C 5 6 O LEU B 102 ? O LEU B 102 N LEU B 28 ? N LEU B 28 C 6 7 O TYR B 23 ? O TYR B 23 N VAL B 20 ? N VAL B 20 C 7 8 N PHE B 19 ? N PHE B 19 O GLU B 74 ? O GLU B 74 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 23 'BINDING SITE FOR RESIDUE AB1 A 200' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE DMS A 204' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE DMS B 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ASP A 30 ? ASP A 30 . ? 1_555 ? 2 AC1 23 GLY A 32 ? GLY A 32 . ? 1_555 ? 3 AC1 23 ALA A 33 ? ALA A 33 . ? 1_555 ? 4 AC1 23 ASP A 34 ? ASP A 34 . ? 1_555 ? 5 AC1 23 ILE A 35 ? ILE A 35 . ? 1_555 ? 6 AC1 23 ASN A 51 ? ASN A 51 . ? 1_556 ? 7 AC1 23 MET A 56 ? MET A 56 . ? 1_555 ? 8 AC1 23 ILE A 57 ? ILE A 57 . ? 1_555 ? 9 AC1 23 GLY A 58 ? GLY A 58 . ? 1_555 ? 10 AC1 23 ILE A 59 ? ILE A 59 . ? 1_555 ? 11 AC1 23 LEU B 28 ? LEU B 28 . ? 1_555 ? 12 AC1 23 ASP B 30 ? ASP B 30 . ? 1_555 ? 13 AC1 23 GLY B 32 ? GLY B 32 . ? 1_555 ? 14 AC1 23 ALA B 33 ? ALA B 33 . ? 1_555 ? 15 AC1 23 ASP B 34 ? ASP B 34 . ? 1_555 ? 16 AC1 23 ILE B 35 ? ILE B 35 . ? 1_555 ? 17 AC1 23 MET B 56 ? MET B 56 . ? 1_555 ? 18 AC1 23 ILE B 57 ? ILE B 57 . ? 1_555 ? 19 AC1 23 GLY B 58 ? GLY B 58 . ? 1_555 ? 20 AC1 23 ILE B 59 ? ILE B 59 . ? 1_555 ? 21 AC1 23 LEU B 101 ? LEU B 101 . ? 1_555 ? 22 AC1 23 HOH G . ? HOH B 202 . ? 1_555 ? 23 AC1 23 HOH G . ? HOH B 404 . ? 1_555 ? 24 AC2 5 GLY A 22 ? GLY A 22 . ? 3_554 ? 25 AC2 5 VAL A 45 ? VAL A 45 . ? 1_555 ? 26 AC2 5 SER A 48 ? SER A 48 . ? 1_555 ? 27 AC2 5 ILE A 49 ? ILE A 49 . ? 1_555 ? 28 AC2 5 GLU A 50 ? GLU A 50 . ? 1_555 ? 29 AC3 6 GLY B 22 ? GLY B 22 . ? 2_665 ? 30 AC3 6 TYR B 23 ? TYR B 23 . ? 2_665 ? 31 AC3 6 SER B 48 ? SER B 48 . ? 1_555 ? 32 AC3 6 ILE B 49 ? ILE B 49 . ? 1_555 ? 33 AC3 6 GLU B 50 ? GLU B 50 . ? 1_555 ? 34 AC3 6 HOH G . ? HOH B 521 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OGQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3OGQ _atom_sites.fract_transf_matrix[1][1] 0.012226 _atom_sites.fract_transf_matrix[1][2] 0.007059 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014118 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029464 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 ? ? ? A . n A 1 2 ASN 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 VAL 4 4 ? ? ? A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 CYS 90 90 90 CYS CYS A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 MET 116 116 116 MET MET A . n B 1 1 TYR 1 1 ? ? ? B . n B 1 2 ASN 2 2 ? ? ? B . n B 1 3 LYS 3 3 ? ? ? B . n B 1 4 VAL 4 4 ? ? ? B . n B 1 5 GLY 5 5 5 GLY GLY B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 PRO 14 14 14 PRO PRO B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 PHE 19 19 19 PHE PHE B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 TYR 23 23 23 TYR TYR B . n B 1 24 PRO 24 24 24 PRO PRO B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 ASP 34 34 34 ASP ASP B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 ASP 42 42 42 ASP ASP B . n B 1 43 PHE 43 43 43 PHE PHE B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 ASN 47 47 47 ASN ASN B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 ILE 49 49 49 ILE ILE B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 GLN 54 54 54 GLN GLN B . n B 1 55 MET 55 55 55 MET MET B . n B 1 56 MET 56 56 56 MET MET B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 ILE 59 59 59 ILE ILE B . n B 1 60 GLY 60 60 60 GLY GLY B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 ASN 70 70 70 ASN ASN B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 HIS 72 72 72 HIS HIS B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 ASP 77 77 77 ASP ASP B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 ASN 79 79 79 ASN ASN B . n B 1 80 TYR 80 80 80 TYR TYR B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 GLN 83 83 83 GLN GLN B . n B 1 84 CYS 84 84 84 CYS CYS B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 CYS 90 90 90 CYS CYS B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 LEU 92 92 92 LEU LEU B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 ASN 95 95 95 ASN ASN B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 SER 98 98 98 SER SER B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 ASN 100 100 100 ASN ASN B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 LEU 102 102 102 LEU LEU B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 ARG 104 104 104 ARG ARG B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 MET 107 107 107 MET MET B . n B 1 108 ILE 108 108 108 ILE ILE B . n B 1 109 LYS 109 109 109 LYS LYS B . n B 1 110 PHE 110 110 110 PHE PHE B . n B 1 111 ASN 111 111 111 ASN ASN B . n B 1 112 ILE 112 112 112 ILE ILE B . n B 1 113 ARG 113 113 113 ARG ARG B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 MET 116 116 116 MET MET B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5130 ? 1 MORE -28 ? 1 'SSA (A^2)' 10720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-03-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -19.2999 18.1880 3.3335 0.1852 0.1852 0.1852 0.0000 0.0000 0.0000 0.0001 0.0000 0.0000 0.0000 0.0000 0.0000 0.1111 -0.0647 -0.0463 0.0477 -0.2287 0.3151 -0.2078 0.2878 -0.4211 'X-RAY DIFFRACTION' 2 ? refined -10.5916 13.4076 2.6871 0.1317 0.1292 0.1318 0.0001 0.0003 0.0022 0.0630 0.3331 1.0476 0.1448 0.2568 0.5907 -0.0174 -0.0793 0.0968 -0.0708 0.0212 0.1755 0.1473 0.0801 -0.2209 'X-RAY DIFFRACTION' 3 ? refined -6.7544 12.9659 -6.7641 0.0806 0.1060 0.0948 0.0059 -0.0037 0.0048 0.8176 1.8676 1.0670 0.5103 0.0129 0.2369 0.0053 0.0015 -0.0068 0.0427 -0.1346 -0.0365 0.0222 0.1480 -0.0128 'X-RAY DIFFRACTION' 4 ? refined 0.0478 8.3039 -14.1019 0.0976 0.1073 0.1195 0.0014 0.0062 0.0032 1.3491 1.7575 2.5310 0.1900 0.3005 1.0394 0.0324 -0.0100 -0.0225 0.0798 -0.0874 0.0308 -0.0718 0.1696 -0.0188 'X-RAY DIFFRACTION' 5 ? refined 5.2505 22.8245 -11.7958 0.2051 0.2036 0.2092 -0.0003 0.0011 0.0028 0.1050 0.5456 3.3982 0.2394 0.5974 1.3616 0.0021 0.1249 -0.1269 -0.1150 0.1122 -0.2057 0.0937 -0.1413 0.3174 'X-RAY DIFFRACTION' 6 ? refined 8.4320 20.6688 -8.8145 0.2095 0.2091 0.2128 0.0036 -0.0007 0.0024 0.3888 1.2725 2.3475 0.7033 0.9553 1.7283 -0.0162 0.0530 -0.0367 -0.1730 0.2000 -0.1862 0.1161 -0.2563 0.2601 'X-RAY DIFFRACTION' 7 ? refined -8.6837 10.9272 -15.0183 0.1305 0.1147 0.1213 0.0079 -0.0121 -0.0049 1.6810 0.8416 1.9425 -0.6496 -0.3297 0.3068 -0.0206 0.0293 -0.0088 -0.0100 -0.0501 0.1736 0.0977 0.1149 -0.2068 'X-RAY DIFFRACTION' 8 ? refined -20.7443 8.3415 -7.9702 0.2278 0.2248 0.2318 0.0058 -0.0026 -0.0013 1.7102 0.9029 2.1810 1.2427 -1.9313 -1.4033 -0.0587 0.0912 -0.0324 -0.0881 -0.2143 0.3293 0.1530 0.3383 -0.4453 'X-RAY DIFFRACTION' 9 ? refined -1.6402 15.5618 -8.7902 0.0984 0.0881 0.0984 -0.0100 0.0042 0.0016 0.5995 1.2583 1.0562 -0.2703 -0.7145 0.2875 0.0253 -0.0150 -0.0104 0.0228 -0.0671 -0.0983 -0.0194 0.1223 0.1366 'X-RAY DIFFRACTION' 10 ? refined -16.8916 22.5152 -6.2133 0.1374 0.1323 0.1396 -0.0001 -0.0036 0.0052 1.3240 0.1419 2.3820 -0.4101 -1.2491 0.5206 -0.0084 -0.0585 0.0669 -0.0940 0.0775 0.2024 0.1304 -0.0937 -0.2305 'X-RAY DIFFRACTION' 11 ? refined -14.9535 30.2355 -5.6572 0.1592 0.1600 0.1573 -0.0009 -0.0020 -0.0016 0.1301 0.4401 0.2196 -0.0941 -0.1123 -0.1324 0.0166 -0.0048 -0.0117 -0.1329 0.1005 0.3718 0.2469 -0.0311 -0.3706 'X-RAY DIFFRACTION' 12 ? refined -7.4323 34.6985 5.5172 0.1002 0.1162 0.1120 -0.0039 0.0068 0.0023 0.3906 0.8719 0.7846 -0.1756 0.2822 0.0396 0.0044 -0.0208 0.0165 0.0244 0.1271 0.0533 -0.1280 -0.1711 -0.0473 'X-RAY DIFFRACTION' 13 ? refined 2.7190 37.1143 8.2658 0.0722 0.0834 0.0810 0.0052 0.0027 0.0006 1.3185 3.2364 2.4260 0.1953 1.4729 1.8005 -0.0063 -0.0082 0.0146 0.1544 0.2726 0.0048 -0.1778 -0.2333 0.1219 'X-RAY DIFFRACTION' 14 ? refined 0.3216 36.3244 17.8698 0.1434 0.1639 0.1600 -0.0089 -0.0027 -0.0030 0.6061 1.0197 2.5712 0.7613 -0.0549 -0.4719 0.0021 -0.0053 0.0031 -0.0712 -0.1154 -0.1175 0.0952 0.1074 0.1381 'X-RAY DIFFRACTION' 15 ? refined 7.1100 22.3258 5.5060 0.2639 0.2662 0.2671 0.0021 0.0001 0.0005 0.2527 0.6511 0.3638 0.3613 0.2443 0.2181 -0.0040 -0.0184 0.0225 0.0302 -0.1573 0.1080 0.0017 0.2349 -0.1793 'X-RAY DIFFRACTION' 16 ? refined -6.2038 35.3050 13.8080 0.1730 0.1339 0.1373 -0.0242 0.0156 -0.0098 2.5169 2.0954 2.3856 -0.1128 0.6916 -0.4307 0.1124 -0.0628 -0.0497 0.1770 -0.0188 0.1393 -0.1928 -0.0132 -0.0947 'X-RAY DIFFRACTION' 17 ? refined -17.9651 37.0547 10.8876 0.2188 0.2174 0.2214 -0.0029 0.0021 0.0002 0.6758 0.1508 1.1403 -0.3192 0.8778 -0.4146 -0.0573 0.0694 -0.0122 0.0790 0.1821 0.3303 -0.2003 -0.3051 -0.4289 'X-RAY DIFFRACTION' 18 ? refined -0.2549 31.5241 7.2832 0.0955 0.0899 0.0954 0.0047 0.0000 -0.0017 0.1887 0.3554 0.8111 -0.0602 0.0243 -0.0832 -0.0099 -0.0010 0.0108 0.0538 0.0308 -0.2119 -0.0488 -0.1414 0.2100 'X-RAY DIFFRACTION' 19 ? refined -15.3151 27.4533 10.5586 0.1121 0.1131 0.1098 -0.0005 -0.0021 -0.0008 1.7597 2.9679 1.5101 -0.4945 -1.4496 -0.5380 -0.0063 0.0017 0.0046 -0.0844 -0.0157 0.2714 0.1038 0.0225 -0.2792 'X-RAY DIFFRACTION' 20 ? refined -18.7095 22.1811 1.2346 0.1790 0.1780 0.1796 0.0024 0.0006 0.0066 2.1657 1.5906 0.9762 1.2870 1.2072 0.2169 0.0046 -0.0366 0.0319 0.0484 -0.0699 0.1195 -0.0061 0.1060 -0.1044 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 5 A 10 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 11 A 18 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 19 A 36 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 37 A 50 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 51 A 59 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 60 A 66 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 67 A 76 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 77 A 85 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 A 86 A 106 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 A 107 A 116 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 B 5 B 13 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 B 14 B 36 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 B 37 B 41 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 B 42 B 54 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 B 55 B 63 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 B 64 B 77 ? . . . . ? 'X-RAY DIFFRACTION' 17 17 B 78 B 88 ? . . . . ? 'X-RAY DIFFRACTION' 18 18 B 89 B 106 ? . . . . ? 'X-RAY DIFFRACTION' 19 19 B 107 B 111 ? . . . . ? 'X-RAY DIFFRACTION' 20 20 B 112 B 116 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 SCALA . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 29 ? ? -65.76 98.39 2 1 LYS A 46 ? ? 49.18 -126.04 3 1 ASP A 77 ? ? 24.66 50.25 4 1 GLU A 78 ? ? 178.33 -176.78 5 1 ASN A 79 ? ? -73.16 43.14 6 1 TYR A 80 ? ? 170.63 -50.62 7 1 LYS A 81 ? ? -177.19 78.91 8 1 LYS B 46 ? ? 55.89 -125.52 9 1 ILE B 75 ? ? -103.13 -63.36 10 1 GLU B 78 ? ? 61.92 -86.64 11 1 TYR B 80 ? ? -77.67 36.04 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 1 ? A TYR 1 2 1 Y 1 A ASN 2 ? A ASN 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A VAL 4 ? A VAL 4 5 1 Y 1 B TYR 1 ? B TYR 1 6 1 Y 1 B ASN 2 ? B ASN 2 7 1 Y 1 B LYS 3 ? B LYS 3 8 1 Y 1 B VAL 4 ? B VAL 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE ; AB1 3 'DIMETHYL SULFOXIDE' DMS 4 water HOH # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.fraction _pdbx_reflns_twin.operator _pdbx_reflns_twin.type _pdbx_reflns_twin.mean_F_square_over_mean_F2 _pdbx_reflns_twin.mean_I2_over_mean_I_square 1 1 1 0.515 'H, K, L' ? ? ? 2 1 1 0.485 h,-h-k,-l ? ? ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AB1 1 200 200 AB1 AB1 A . D 3 DMS 1 204 204 DMS DMS A . E 3 DMS 1 203 203 DMS DMS B . F 4 HOH 1 400 400 HOH HOH A . F 4 HOH 2 401 401 HOH HOH A . F 4 HOH 3 405 405 HOH HOH A . F 4 HOH 4 406 406 HOH HOH A . F 4 HOH 5 407 407 HOH HOH A . F 4 HOH 6 408 408 HOH HOH A . F 4 HOH 7 412 412 HOH HOH A . F 4 HOH 8 413 413 HOH HOH A . F 4 HOH 9 415 415 HOH HOH A . F 4 HOH 10 416 416 HOH HOH A . F 4 HOH 11 417 417 HOH HOH A . F 4 HOH 12 418 418 HOH HOH A . F 4 HOH 13 420 420 HOH HOH A . F 4 HOH 14 421 421 HOH HOH A . F 4 HOH 15 424 424 HOH HOH A . F 4 HOH 16 425 425 HOH HOH A . F 4 HOH 17 429 429 HOH HOH A . F 4 HOH 18 431 431 HOH HOH A . F 4 HOH 19 432 432 HOH HOH A . F 4 HOH 20 435 435 HOH HOH A . F 4 HOH 21 436 436 HOH HOH A . F 4 HOH 22 437 437 HOH HOH A . F 4 HOH 23 438 438 HOH HOH A . F 4 HOH 24 442 442 HOH HOH A . F 4 HOH 25 443 443 HOH HOH A . F 4 HOH 26 445 445 HOH HOH A . F 4 HOH 27 446 446 HOH HOH A . F 4 HOH 28 447 447 HOH HOH A . F 4 HOH 29 448 448 HOH HOH A . F 4 HOH 30 450 450 HOH HOH A . F 4 HOH 31 452 452 HOH HOH A . F 4 HOH 32 455 455 HOH HOH A . F 4 HOH 33 456 456 HOH HOH A . F 4 HOH 34 457 457 HOH HOH A . F 4 HOH 35 459 459 HOH HOH A . F 4 HOH 36 461 461 HOH HOH A . F 4 HOH 37 462 462 HOH HOH A . F 4 HOH 38 468 468 HOH HOH A . F 4 HOH 39 469 469 HOH HOH A . F 4 HOH 40 470 470 HOH HOH A . F 4 HOH 41 471 471 HOH HOH A . F 4 HOH 42 472 472 HOH HOH A . F 4 HOH 43 474 474 HOH HOH A . F 4 HOH 44 477 477 HOH HOH A . F 4 HOH 45 479 479 HOH HOH A . F 4 HOH 46 480 480 HOH HOH A . F 4 HOH 47 482 482 HOH HOH A . F 4 HOH 48 483 483 HOH HOH A . F 4 HOH 49 484 484 HOH HOH A . F 4 HOH 50 488 488 HOH HOH A . F 4 HOH 51 489 489 HOH HOH A . F 4 HOH 52 490 490 HOH HOH A . F 4 HOH 53 492 492 HOH HOH A . F 4 HOH 54 497 497 HOH HOH A . F 4 HOH 55 498 498 HOH HOH A . F 4 HOH 56 501 501 HOH HOH A . F 4 HOH 57 503 503 HOH HOH A . F 4 HOH 58 505 505 HOH HOH A . F 4 HOH 59 508 508 HOH HOH A . F 4 HOH 60 510 510 HOH HOH A . F 4 HOH 61 511 511 HOH HOH A . F 4 HOH 62 512 512 HOH HOH A . F 4 HOH 63 513 513 HOH HOH A . F 4 HOH 64 514 514 HOH HOH A . F 4 HOH 65 515 515 HOH HOH A . F 4 HOH 66 520 520 HOH HOH A . F 4 HOH 67 523 523 HOH HOH A . F 4 HOH 68 525 525 HOH HOH A . F 4 HOH 69 526 526 HOH HOH A . F 4 HOH 70 527 527 HOH HOH A . F 4 HOH 71 528 528 HOH HOH A . F 4 HOH 72 529 529 HOH HOH A . F 4 HOH 73 530 530 HOH HOH A . F 4 HOH 74 531 531 HOH HOH A . F 4 HOH 75 532 532 HOH HOH A . F 4 HOH 76 533 533 HOH HOH A . F 4 HOH 77 534 534 HOH HOH A . F 4 HOH 78 535 535 HOH HOH A . F 4 HOH 79 536 536 HOH HOH A . F 4 HOH 80 537 537 HOH HOH A . F 4 HOH 81 539 539 HOH HOH A . F 4 HOH 82 540 540 HOH HOH A . F 4 HOH 83 541 541 HOH HOH A . F 4 HOH 84 543 543 HOH HOH A . G 4 HOH 1 202 202 HOH HOH B . G 4 HOH 2 402 402 HOH HOH B . G 4 HOH 3 403 403 HOH HOH B . G 4 HOH 4 404 404 HOH HOH B . G 4 HOH 5 409 409 HOH HOH B . G 4 HOH 6 410 410 HOH HOH B . G 4 HOH 7 411 411 HOH HOH B . G 4 HOH 8 414 414 HOH HOH B . G 4 HOH 9 419 419 HOH HOH B . G 4 HOH 10 422 422 HOH HOH B . G 4 HOH 11 423 423 HOH HOH B . G 4 HOH 12 426 426 HOH HOH B . G 4 HOH 13 427 427 HOH HOH B . G 4 HOH 14 428 428 HOH HOH B . G 4 HOH 15 430 430 HOH HOH B . G 4 HOH 16 433 433 HOH HOH B . G 4 HOH 17 434 434 HOH HOH B . G 4 HOH 18 439 439 HOH HOH B . G 4 HOH 19 440 440 HOH HOH B . G 4 HOH 20 441 441 HOH HOH B . G 4 HOH 21 444 444 HOH HOH B . G 4 HOH 22 449 449 HOH HOH B . G 4 HOH 23 451 451 HOH HOH B . G 4 HOH 24 453 453 HOH HOH B . G 4 HOH 25 454 454 HOH HOH B . G 4 HOH 26 458 458 HOH HOH B . G 4 HOH 27 460 460 HOH HOH B . G 4 HOH 28 463 463 HOH HOH B . G 4 HOH 29 464 464 HOH HOH B . G 4 HOH 30 465 465 HOH HOH B . G 4 HOH 31 466 466 HOH HOH B . G 4 HOH 32 467 467 HOH HOH B . G 4 HOH 33 473 473 HOH HOH B . G 4 HOH 34 475 475 HOH HOH B . G 4 HOH 35 476 476 HOH HOH B . G 4 HOH 36 478 478 HOH HOH B . G 4 HOH 37 481 481 HOH HOH B . G 4 HOH 38 485 485 HOH HOH B . G 4 HOH 39 486 486 HOH HOH B . G 4 HOH 40 487 487 HOH HOH B . G 4 HOH 41 491 491 HOH HOH B . G 4 HOH 42 493 493 HOH HOH B . G 4 HOH 43 494 494 HOH HOH B . G 4 HOH 44 495 495 HOH HOH B . G 4 HOH 45 496 496 HOH HOH B . G 4 HOH 46 499 499 HOH HOH B . G 4 HOH 47 500 500 HOH HOH B . G 4 HOH 48 502 502 HOH HOH B . G 4 HOH 49 504 504 HOH HOH B . G 4 HOH 50 506 506 HOH HOH B . G 4 HOH 51 507 507 HOH HOH B . G 4 HOH 52 509 509 HOH HOH B . G 4 HOH 53 516 516 HOH HOH B . G 4 HOH 54 517 517 HOH HOH B . G 4 HOH 55 518 518 HOH HOH B . G 4 HOH 56 519 519 HOH HOH B . G 4 HOH 57 521 521 HOH HOH B . G 4 HOH 58 522 522 HOH HOH B . G 4 HOH 59 524 524 HOH HOH B . G 4 HOH 60 538 538 HOH HOH B . G 4 HOH 61 542 542 HOH HOH B . #