HEADER TRANSFERASE 17-AUG-10 3OH4 TITLE PROTEIN STRUCTURE OF USP FROM L. MAJOR BOUND TO URIDINE-5'-DIPHOSPHATE TITLE 2 GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-SUGAR PYROPHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.64; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 STRAIN: 5ASKH; SOURCE 5 GENE: USP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS LEFT HANDED BETA HELIX, ROSSMANN FOLD, UDP SUGAR PYROPHOSPHORYLASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.DICKMANNS,S.DAMEROW,P.NEUMANN,E.-C.SCHULZ,A.LAMERZ,F.H.ROUTIER, AUTHOR 2 R.FICNER REVDAT 4 06-SEP-23 3OH4 1 REMARK SEQADV REVDAT 3 16-MAR-11 3OH4 1 JRNL REVDAT 2 05-JAN-11 3OH4 1 JRNL REVDAT 1 17-NOV-10 3OH4 0 JRNL AUTH A.DICKMANNS,S.DAMEROW,P.NEUMANN,E.C.SCHULZ,A.C.LAMERZ, JRNL AUTH 2 F.H.ROUTIER,R.FICNER JRNL TITL STRUCTURAL BASIS FOR THE BROAD SUBSTRATE RANGE OF THE JRNL TITL 2 UDP-SUGAR PYROPHOSPHORYLASE FROM LEISHMANIA MAJOR. JRNL REF J.MOL.BIOL. V. 405 461 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21073876 JRNL DOI 10.1016/J.JMB.2010.10.057 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.1_357 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 37766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1839 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.8947 - 5.1901 0.98 2789 148 0.1595 0.1822 REMARK 3 2 5.1901 - 4.1220 1.00 2796 143 0.1338 0.1513 REMARK 3 3 4.1220 - 3.6017 1.00 2787 152 0.1544 0.1902 REMARK 3 4 3.6017 - 3.2727 1.00 2814 125 0.1788 0.2020 REMARK 3 5 3.2727 - 3.0383 1.00 2803 132 0.1877 0.2465 REMARK 3 6 3.0383 - 2.8593 1.00 2800 129 0.1964 0.2319 REMARK 3 7 2.8593 - 2.7162 1.00 2753 139 0.1971 0.2437 REMARK 3 8 2.7162 - 2.5980 1.00 2800 146 0.2038 0.2385 REMARK 3 9 2.5980 - 2.4980 1.00 2742 157 0.2024 0.2701 REMARK 3 10 2.4980 - 2.4119 1.00 2797 143 0.1949 0.2718 REMARK 3 11 2.4119 - 2.3365 0.99 2736 143 0.2082 0.2391 REMARK 3 12 2.3365 - 2.2697 0.99 2735 137 0.2208 0.2816 REMARK 3 13 2.2697 - 2.2100 0.93 2575 145 0.2654 0.3288 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 55.67 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.78610 REMARK 3 B22 (A**2) : -7.58500 REMARK 3 B33 (A**2) : -2.20110 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.97620 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4751 REMARK 3 ANGLE : 0.881 6466 REMARK 3 CHIRALITY : 0.060 737 REMARK 3 PLANARITY : 0.003 841 REMARK 3 DIHEDRAL : 17.354 1798 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:76) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3331 29.6847 48.4325 REMARK 3 T TENSOR REMARK 3 T11: 0.5937 T22: 0.6611 REMARK 3 T33: 0.5712 T12: -0.2934 REMARK 3 T13: 0.0255 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 2.4375 L22: 0.6454 REMARK 3 L33: 1.4576 L12: 0.2909 REMARK 3 L13: -1.0358 L23: 0.1958 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: 0.0054 S13: 0.2316 REMARK 3 S21: 0.2993 S22: 0.0731 S23: 0.1079 REMARK 3 S31: 0.7325 S32: -0.3819 S33: -0.0612 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 77:85 OR RESID 300:356) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5334 13.4811 24.6998 REMARK 3 T TENSOR REMARK 3 T11: 0.8245 T22: 0.7863 REMARK 3 T33: 0.8795 T12: -0.4864 REMARK 3 T13: 0.0307 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 2.7537 L22: 2.0776 REMARK 3 L33: 0.4574 L12: 2.1166 REMARK 3 L13: 0.8518 L23: 0.9441 REMARK 3 S TENSOR REMARK 3 S11: 0.1766 S12: -0.1910 S13: 0.4920 REMARK 3 S21: -0.3983 S22: -0.2566 S23: -0.5612 REMARK 3 S31: -0.7526 S32: 0.5977 S33: -0.0160 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 86:195 OR RESID 224:299 OR RESID REMARK 3 357:378 OR RESID 406:615) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4513 -6.7440 24.8297 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.3282 REMARK 3 T33: 0.2648 T12: -0.0785 REMARK 3 T13: 0.0093 T23: 0.0548 REMARK 3 L TENSOR REMARK 3 L11: 1.2651 L22: 1.7419 REMARK 3 L33: 2.8533 L12: -0.1559 REMARK 3 L13: 0.4783 L23: 0.1916 REMARK 3 S TENSOR REMARK 3 S11: 0.1317 S12: -0.0833 S13: 0.0155 REMARK 3 S21: 0.0714 S22: -0.1511 S23: -0.1658 REMARK 3 S31: -0.0805 S32: 0.0840 S33: 0.0189 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 379:405) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3901 25.6558 30.2406 REMARK 3 T TENSOR REMARK 3 T11: 0.8705 T22: 0.5116 REMARK 3 T33: 0.5776 T12: -0.1852 REMARK 3 T13: -0.1060 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 0.0824 L22: 0.2830 REMARK 3 L33: 0.3288 L12: -0.0599 REMARK 3 L13: -0.0763 L23: 0.3046 REMARK 3 S TENSOR REMARK 3 S11: 0.0828 S12: 0.0853 S13: 0.1470 REMARK 3 S21: -0.4647 S22: 0.0133 S23: 0.2145 REMARK 3 S31: -0.1485 S32: -0.0332 S33: -0.0927 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 196:223) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2214 25.6749 38.0894 REMARK 3 T TENSOR REMARK 3 T11: 0.5808 T22: 0.5266 REMARK 3 T33: 0.5570 T12: -0.2313 REMARK 3 T13: -0.1315 T23: -0.0986 REMARK 3 L TENSOR REMARK 3 L11: 1.2031 L22: 0.1377 REMARK 3 L33: 0.7717 L12: -0.1013 REMARK 3 L13: 0.4557 L23: -0.2420 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: 0.0141 S13: 0.1959 REMARK 3 S21: -0.3045 S22: -0.1672 S23: 0.2543 REMARK 3 S31: 0.3943 S32: -0.2524 S33: 0.0885 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OH4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9814 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37828 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.05200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3OGZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.90700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.83250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.90700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 60.83250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 712 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 728 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 758 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 237 REMARK 465 ARG A 238 REMARK 465 ASP A 239 REMARK 465 VAL A 240 REMARK 465 VAL A 241 REMARK 465 PRO A 242 REMARK 465 ASP A 243 REMARK 465 SER A 244 REMARK 465 GLY A 245 REMARK 465 ASP A 246 REMARK 465 GLY A 247 REMARK 465 THR A 248 REMARK 465 ALA A 249 REMARK 465 THR A 250 REMARK 465 GLY A 342 REMARK 465 GLY A 343 REMARK 465 ASP A 344 REMARK 465 GLU A 345 REMARK 465 VAL A 346 REMARK 465 SER A 347 REMARK 465 ASP A 348 REMARK 465 PRO A 349 REMARK 465 THR A 350 REMARK 465 ASN A 611 REMARK 465 THR A 612 REMARK 465 LYS A 613 REMARK 465 GLY A 614 REMARK 465 GLU A 615 REMARK 465 SER A 616 REMARK 465 GLU A 617 REMARK 465 ALA A 618 REMARK 465 GLY A 619 REMARK 465 ALA A 620 REMARK 465 PRO A 621 REMARK 465 SER A 622 REMARK 465 GLY A 623 REMARK 465 ALA A 624 REMARK 465 ALA A 625 REMARK 465 ASP A 626 REMARK 465 PRO A 627 REMARK 465 ALA A 628 REMARK 465 LYS A 629 REMARK 465 LEU A 630 REMARK 465 MET A 631 REMARK 465 ARG A 632 REMARK 465 ARG A 633 REMARK 465 LEU A 634 REMARK 465 GLU A 635 REMARK 465 HIS A 636 REMARK 465 HIS A 637 REMARK 465 HIS A 638 REMARK 465 HIS A 639 REMARK 465 HIS A 640 REMARK 465 HIS A 641 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 610 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 303 -23.14 -37.76 REMARK 500 PRO A 306 48.56 -80.58 REMARK 500 SER A 335 -76.48 -44.13 REMARK 500 ASN A 339 -40.30 -164.01 REMARK 500 ARG A 394 6.58 -66.40 REMARK 500 SER A 506 -128.03 55.77 REMARK 500 PHE A 517 76.77 -119.44 REMARK 500 MET A 605 118.90 -163.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UPG A 7566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 642 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OH0 RELATED DB: PDB REMARK 900 RELATED ID: 3OH1 RELATED DB: PDB REMARK 900 RELATED ID: 3OH2 RELATED DB: PDB REMARK 900 RELATED ID: 3OH3 RELATED DB: PDB REMARK 900 RELATED ID: 3OGZ RELATED DB: PDB DBREF 3OH4 A 1 630 UNP D3G6S4 D3G6S4_LEIMA 1 630 SEQADV 3OH4 MET A 631 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 ARG A 632 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 ARG A 633 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 LEU A 634 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 GLU A 635 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 636 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 637 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 638 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 639 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 640 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH4 HIS A 641 UNP D3G6S4 EXPRESSION TAG SEQRES 1 A 641 MET THR ASN PRO SER ASN SER ASN LEU GLN ALA LEU ARG SEQRES 2 A 641 GLU GLU LEU CYS THR PRO GLY LEU ASP GLN GLY HIS LEU SEQRES 3 A 641 PHE GLU GLY TRP PRO GLU THR VAL ASP GLU CYS ASN GLU SEQRES 4 A 641 ARG GLN ILE ALA LEU LEU THR ASP LEU TYR MET PHE SER SEQRES 5 A 641 ASN MET TYR PRO GLY GLY VAL ALA GLN TYR ILE ARG ASN SEQRES 6 A 641 GLY HIS GLU LEU LEU ALA ARG GLU SER GLU GLU VAL ASP SEQRES 7 A 641 PHE ALA ALA LEU GLU MET PRO PRO LEU ILE PHE GLU ALA SEQRES 8 A 641 PRO SER LEU HIS ARG ARG THR ALA GLU ARG THR ALA LEU SEQRES 9 A 641 GLU ASN ALA GLY THR ALA MET LEU CYS LYS THR VAL PHE SEQRES 10 A 641 VAL LEU VAL ALA GLY GLY LEU GLY GLU ARG LEU GLY TYR SEQRES 11 A 641 SER SER ILE LYS VAL SER LEU PRO VAL GLU THR ALA THR SEQRES 12 A 641 ASN THR THR TYR LEU ALA TYR TYR LEU ARG TRP ALA GLN SEQRES 13 A 641 ARG VAL GLY GLY LYS GLU VAL PRO PHE VAL ILE MET THR SEQRES 14 A 641 SER ASP ASP THR HIS ASP ARG THR LEU GLN LEU LEU ARG SEQRES 15 A 641 GLU LEU GLN LEU GLU VAL PRO ASN LEU HIS VAL LEU LYS SEQRES 16 A 641 GLN GLY GLN VAL PHE CYS PHE ALA ASP SER ALA ALA HIS SEQRES 17 A 641 LEU ALA LEU ASP GLU THR GLY LYS LEU LEU ARG LYS PRO SEQRES 18 A 641 HIS GLY HIS GLY ASP VAL HIS SER LEU ILE TYR ASN ALA SEQRES 19 A 641 THR VAL LYS ARG ASP VAL VAL PRO ASP SER GLY ASP GLY SEQRES 20 A 641 THR ALA THR ALA GLN PRO LEU VAL ASN ASP TRP LEU ALA SEQRES 21 A 641 ALA GLY TYR GLU SER ILE VAL PHE ILE GLN ASP THR ASN SEQRES 22 A 641 ALA GLY ALA THR ILE THR ILE PRO ILE SER LEU ALA LEU SEQRES 23 A 641 SER ALA GLU HIS SER LEU ASP MET ASN PHE THR CYS ILE SEQRES 24 A 641 PRO ARG VAL PRO LYS GLU PRO ILE GLY LEU LEU CYS ARG SEQRES 25 A 641 THR LYS LYS ASN SER GLY ASP PRO TRP LEU VAL ALA ASN SEQRES 26 A 641 VAL GLU TYR ASN VAL PHE ALA GLU VAL SER ARG ALA LEU SEQRES 27 A 641 ASN LYS ASP GLY GLY ASP GLU VAL SER ASP PRO THR GLY SEQRES 28 A 641 PHE SER PRO PHE PRO GLY SER VAL ASN THR LEU VAL PHE SEQRES 29 A 641 LYS LEU SER SER TYR VAL ASP ARG LEU ARG GLU SER HIS SEQRES 30 A 641 GLY ILE VAL PRO GLU PHE ILE ASN PRO LYS TYR SER ASP SEQRES 31 A 641 GLU THR ARG ARG SER PHE LYS LYS PRO ALA ARG ILE GLU SEQRES 32 A 641 SER LEU MET GLN ASP ILE ALA LEU LEU PHE SER GLU ASP SEQRES 33 A 641 ASP TYR ARG VAL GLY GLY THR VAL PHE GLU ARG PHE SER SEQRES 34 A 641 TYR GLN PRO VAL LYS ASN SER LEU GLU GLU ALA ALA GLY SEQRES 35 A 641 LEU VAL ALA GLN GLY ASN GLY ALA TYR CYS ALA ALA THR SEQRES 36 A 641 GLY GLU ALA ALA PHE TYR GLU LEU GLN ARG ARG ARG LEU SEQRES 37 A 641 LYS ALA ILE GLY LEU PRO LEU PHE TYR SER SER GLN PRO SEQRES 38 A 641 GLU VAL THR VAL ALA LYS ASP ALA PHE GLY VAL ARG LEU SEQRES 39 A 641 PHE PRO ILE ILE VAL LEU ASP THR VAL CYS ALA SER SER SEQRES 40 A 641 GLY SER LEU ASP ASP LEU ALA ARG VAL PHE PRO THR PRO SEQRES 41 A 641 GLU LYS VAL HIS ILE ASP GLN HIS SER THR LEU ILE VAL SEQRES 42 A 641 GLU GLY ARG VAL ILE ILE GLU SER LEU GLU LEU TYR GLY SEQRES 43 A 641 ALA LEU THR ILE ARG GLY PRO THR ASP SER MET ALA LEU SEQRES 44 A 641 PRO HIS VAL VAL ARG ASN ALA VAL VAL ARG ASN ALA GLY SEQRES 45 A 641 TRP SER VAL HIS ALA ILE LEU SER LEU CYS ALA GLY ARG SEQRES 46 A 641 ASP SER ARG LEU SER GLU VAL ASP ARG ILE ARG GLY PHE SEQRES 47 A 641 VAL LEU LYS LYS THR ALA MET ALA VAL MET ASP CYS ASN SEQRES 48 A 641 THR LYS GLY GLU SER GLU ALA GLY ALA PRO SER GLY ALA SEQRES 49 A 641 ALA ASP PRO ALA LYS LEU MET ARG ARG LEU GLU HIS HIS SEQRES 50 A 641 HIS HIS HIS HIS HET UPG A7566 36 HET GOL A 642 6 HETNAM UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE HETNAM GOL GLYCEROL HETSYN UPG URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE HETSYN 2 UPG ESTER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 UPG C15 H24 N2 O17 P2 FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *219(H2 O) HELIX 1 1 SER A 5 LEU A 16 1 12 HELIX 2 2 GLN A 23 GLU A 28 5 6 HELIX 3 3 ASN A 38 PHE A 51 1 14 HELIX 4 4 SER A 52 MET A 54 5 3 HELIX 5 5 GLY A 57 GLU A 73 1 17 HELIX 6 6 THR A 98 LEU A 112 1 15 HELIX 7 7 ILE A 133 LEU A 137 5 5 HELIX 8 8 THR A 146 GLY A 160 1 15 HELIX 9 9 THR A 173 GLN A 185 1 13 HELIX 10 10 GLY A 223 GLY A 225 5 3 HELIX 11 11 ASP A 226 ALA A 234 1 9 HELIX 12 12 PRO A 253 ALA A 261 1 9 HELIX 13 13 GLY A 275 HIS A 290 1 16 HELIX 14 14 GLU A 327 LEU A 338 1 12 HELIX 15 15 LEU A 366 HIS A 377 1 12 HELIX 16 16 LEU A 405 PHE A 413 5 9 HELIX 17 17 GLU A 426 TYR A 430 5 5 HELIX 18 18 SER A 436 GLN A 446 1 11 HELIX 19 19 CYS A 452 ILE A 471 1 20 HELIX 20 20 ASP A 501 SER A 506 1 6 HELIX 21 21 SER A 509 PHE A 517 1 9 HELIX 22 22 THR A 519 GLU A 521 5 3 HELIX 23 23 SER A 590 ILE A 595 1 6 SHEET 1 A 7 ALA A 81 GLU A 83 0 SHEET 2 A 7 GLY A 308 LYS A 314 -1 O ARG A 312 N GLU A 83 SHEET 3 A 7 GLY A 357 LYS A 365 -1 O SER A 358 N GLY A 308 SHEET 4 A 7 SER A 265 GLN A 270 -1 N ILE A 266 O PHE A 364 SHEET 5 A 7 THR A 115 VAL A 120 1 N VAL A 118 O ILE A 269 SHEET 6 A 7 PHE A 165 THR A 169 1 O VAL A 166 N LEU A 119 SHEET 7 A 7 LEU A 191 LYS A 195 1 O HIS A 192 N PHE A 165 SHEET 1 B 6 ILE A 88 GLU A 90 0 SHEET 2 B 6 VAL A 420 VAL A 424 1 O VAL A 424 N PHE A 89 SHEET 3 B 6 MET A 294 ILE A 299 1 N PHE A 296 O GLY A 421 SHEET 4 B 6 GLY A 357 LYS A 365 -1 O GLY A 357 N ILE A 299 SHEET 5 B 6 GLY A 308 LYS A 314 -1 N GLY A 308 O SER A 358 SHEET 6 B 6 LEU A 322 VAL A 326 -1 O LEU A 322 N THR A 313 SHEET 1 C 2 GLN A 198 PHE A 200 0 SHEET 2 C 2 ARG A 219 PRO A 221 -1 O LYS A 220 N VAL A 199 SHEET 1 D 2 PHE A 383 ILE A 384 0 SHEET 2 D 2 ILE A 402 GLU A 403 -1 O GLU A 403 N PHE A 383 SHEET 1 E 2 VAL A 483 VAL A 485 0 SHEET 2 E 2 PHE A 490 VAL A 492 -1 O PHE A 490 N VAL A 485 SHEET 1 F 4 ILE A 497 LEU A 500 0 SHEET 2 F 4 THR A 530 GLU A 534 1 O LEU A 531 N ILE A 497 SHEET 3 F 4 ALA A 547 ARG A 551 1 O LEU A 548 N ILE A 532 SHEET 4 F 4 ALA A 606 MET A 608 1 O ALA A 606 N THR A 549 SHEET 1 G 3 VAL A 523 ILE A 525 0 SHEET 2 G 3 LEU A 542 TYR A 545 1 O LEU A 542 N HIS A 524 SHEET 3 G 3 ALA A 566 ARG A 569 1 O VAL A 568 N GLU A 543 SHEET 1 H 2 VAL A 537 ILE A 539 0 SHEET 2 H 2 HIS A 561 VAL A 563 1 O VAL A 563 N ILE A 538 SHEET 1 I 2 SER A 574 ALA A 577 0 SHEET 2 I 2 PHE A 598 LYS A 601 -1 O LYS A 601 N SER A 574 CISPEP 1 PHE A 495 PRO A 496 0 -1.58 SITE 1 AC1 25 VAL A 120 ALA A 121 GLY A 122 GLY A 123 SITE 2 AC1 25 MET A 168 GLN A 196 PRO A 221 GLY A 223 SITE 3 AC1 25 HIS A 224 GLN A 270 ASP A 271 ILE A 307 SITE 4 AC1 25 GLY A 308 ASN A 325 GLU A 327 TYR A 328 SITE 5 AC1 25 SER A 358 VAL A 359 ASN A 360 GLN A 407 SITE 6 AC1 25 TYR A 430 LYS A 434 HOH A 697 HOH A 721 SITE 7 AC1 25 HOH A 752 SITE 1 AC2 4 SER A 478 SER A 479 GLN A 480 THR A 603 CRYST1 107.814 121.665 61.393 90.00 105.73 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009275 0.000000 0.002612 0.00000 SCALE2 0.000000 0.008219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016922 0.00000