HEADER LYASE 17-AUG-10 3OHI TITLE STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE IN COMPLEX WITH TITLE 2 3-HYDROXY-2-PYRIDONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.2.13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GIARDIA INTESTINALIS; SOURCE 3 ORGANISM_COMMON: GIARDIA INTESTINALIS; SOURCE 4 ORGANISM_TAXID: 5741; SOURCE 5 STRAIN: WB; SOURCE 6 GENE: ALD, FBPA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET100/D-TOPO KEYWDS CLASS II FRUCTOSE-1, 6-BISPHOSPHATE ALDOLASE, GLYCOLYTIC PATHWAY, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR O.HERZBERG,A.GALKIN REVDAT 3 06-SEP-23 3OHI 1 REMARK LINK REVDAT 2 23-MAR-11 3OHI 1 JRNL REVDAT 1 19-JAN-11 3OHI 0 JRNL AUTH Z.LI,Z.LIU,D.W.CHO,J.ZOU,M.GONG,R.M.BREECE,A.GALKIN,L.LI, JRNL AUTH 2 H.ZHAO,G.D.MAESTAS,D.L.TIERNEY,O.HERZBERG,D.DUNAWAY-MARIANO, JRNL AUTH 3 P.S.MARIANO JRNL TITL RATIONAL DESIGN, SYNTHESIS AND EVALUATION OF FIRST JRNL TITL 2 GENERATION INHIBITORS OF THE GIARDIA LAMBLIA JRNL TITL 3 FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE. JRNL REF J.INORG.BIOCHEM. V. 105 509 2010 JRNL REFN ISSN 0162-0134 JRNL PMID 21333622 JRNL DOI 10.1016/J.JINORGBIO.2010.12.012 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.6 REMARK 3 NUMBER OF REFLECTIONS : 22497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1204 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1664 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4857 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 339 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.324 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4983 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6724 ; 1.534 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 633 ; 6.197 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;37.366 ;24.611 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 904 ;17.764 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;22.928 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 761 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3630 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2622 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3389 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 327 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 43 ; 0.261 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.222 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3155 ; 3.832 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5080 ; 4.100 ; 1.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1828 ; 3.214 ; 1.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1644 ; 3.998 ; 1.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OHI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061122. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22497 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3GAY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-25% POLYETHYLGLYCOL 3350, 0.2 M REMARK 280 NH4NO3, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0 REMARK 280 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.79000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.72500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.47500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.72500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.79000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.47500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 144 REMARK 465 ASP A 145 REMARK 465 VAL A 146 REMARK 465 MET B 1 REMARK 465 GLU B 144 REMARK 465 ASP B 145 REMARK 465 VAL B 146 REMARK 465 GLN B 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 129 CB OG REMARK 470 SER B 129 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 56 -36.37 -37.03 REMARK 500 MET A 59 -59.25 63.11 REMARK 500 LEU A 97 28.51 -76.25 REMARK 500 PRO A 110 157.81 -47.20 REMARK 500 SER A 129 -4.00 75.33 REMARK 500 ASP A 188 34.55 -91.50 REMARK 500 ALA A 192 58.07 -115.65 REMARK 500 TYR A 226 54.27 -107.79 REMARK 500 ASP A 255 -52.17 -138.71 REMARK 500 LYS B 42 49.32 39.74 REMARK 500 ASP B 58 28.15 45.33 REMARK 500 MET B 59 -64.78 73.08 REMARK 500 SER B 107 -18.82 -47.19 REMARK 500 ARG B 116 -71.73 -54.96 REMARK 500 SER B 129 2.26 103.12 REMARK 500 ILE B 174 22.12 -140.20 REMARK 500 ASP B 188 69.07 -105.09 REMARK 500 ALA B 192 60.73 -109.40 REMARK 500 VAL B 215 43.77 39.56 REMARK 500 TYR B 226 54.05 -114.81 REMARK 500 ASP B 232 39.71 -96.94 REMARK 500 ASP B 255 -55.37 -138.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 340 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 84 NE2 REMARK 620 2 HIS A 178 NE2 97.1 REMARK 620 3 HIS A 210 ND1 95.2 161.2 REMARK 620 4 HDX A 341 OAD 77.7 95.0 101.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 342 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 84 NE2 REMARK 620 2 HIS B 178 NE2 71.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDX A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDX B 343 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ISV RELATED DB: PDB REMARK 900 STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE IN COMPLEX REMARK 900 WITH PHOSPHOGLYCOLOHYDROXAMATE REMARK 900 RELATED ID: 2ISW RELATED DB: PDB REMARK 900 STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE IN COMPLEX REMARK 900 WITH PHOSPHOGLYCOLOHYDROXAMATE REMARK 900 RELATED ID: 3GAK RELATED DB: PDB REMARK 900 STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE REMARK 900 RELATED ID: 3GB6 RELATED DB: PDB REMARK 900 STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE IN COMPLEX REMARK 900 WITH 1,6-DI-O-PHOSPHONO-D-FRUCTOSE REMARK 900 RELATED ID: 3GAY RELATED DB: PDB REMARK 900 STRUCTURE OF GIARDIA FRUCTOSE-1,6-BIPHOSPHATE ALDOLASE IN COMPLEX REMARK 900 WITH 1,6-DI-O-PHOSPHONO-D-TAGATOSE DBREF 3OHI A 1 323 UNP O97447 O97447_GIALA 1 323 DBREF 3OHI B 1 323 UNP O97447 O97447_GIALA 1 323 SEQRES 1 A 323 MET PRO LEU CYS THR LEU ARG GLN MET LEU GLY GLU ALA SEQRES 2 A 323 ARG LYS HIS LYS TYR GLY VAL GLY ALA PHE ASN VAL ASN SEQRES 3 A 323 ASN MET GLU GLN ILE GLN GLY ILE MET LYS ALA VAL VAL SEQRES 4 A 323 GLN LEU LYS SER PRO VAL ILE LEU GLN CYS SER ARG GLY SEQRES 5 A 323 ALA LEU LYS TYR SER ASP MET ILE TYR LEU LYS LYS LEU SEQRES 6 A 323 CYS GLU ALA ALA LEU GLU LYS HIS PRO ASP ILE PRO ILE SEQRES 7 A 323 CYS ILE HIS LEU ASP HIS GLY ASP THR LEU GLU SER VAL SEQRES 8 A 323 LYS MET ALA ILE ASP LEU GLY PHE SER SER VAL MET ILE SEQRES 9 A 323 ASP ALA SER HIS HIS PRO PHE ASP GLU ASN VAL ARG ILE SEQRES 10 A 323 THR LYS GLU VAL VAL ALA TYR ALA HIS ALA ARG SER VAL SEQRES 11 A 323 SER VAL GLU ALA GLU LEU GLY THR LEU GLY GLY ILE GLU SEQRES 12 A 323 GLU ASP VAL GLN ASN THR VAL GLN LEU THR GLU PRO GLN SEQRES 13 A 323 ASP ALA LYS LYS PHE VAL GLU LEU THR GLY VAL ASP ALA SEQRES 14 A 323 LEU ALA VAL ALA ILE GLY THR SER HIS GLY ALA TYR LYS SEQRES 15 A 323 PHE LYS SER GLU SER ASP ILE ARG LEU ALA ILE ASP ARG SEQRES 16 A 323 VAL LYS THR ILE SER ASP LEU THR GLY ILE PRO LEU VAL SEQRES 17 A 323 MET HIS GLY SER SER SER VAL PRO LYS ASP VAL LYS ASP SEQRES 18 A 323 MET ILE ASN LYS TYR GLY GLY LYS MET PRO ASP ALA VAL SEQRES 19 A 323 GLY VAL PRO ILE GLU SER ILE VAL HIS ALA ILE GLY GLU SEQRES 20 A 323 GLY VAL CYS LYS ILE ASN VAL ASP SER ASP SER ARG MET SEQRES 21 A 323 ALA MET THR GLY ALA ILE ARG LYS VAL PHE VAL GLU HIS SEQRES 22 A 323 PRO GLU LYS PHE ASP PRO ARG ASP TYR LEU GLY PRO GLY SEQRES 23 A 323 ARG ASP ALA ILE THR GLU MET LEU ILE PRO LYS ILE LYS SEQRES 24 A 323 ALA PHE GLY SER ALA GLY HIS ALA GLY ASP TYR LYS VAL SEQRES 25 A 323 VAL SER LEU GLU GLU ALA LYS ALA TRP TYR LYS SEQRES 1 B 323 MET PRO LEU CYS THR LEU ARG GLN MET LEU GLY GLU ALA SEQRES 2 B 323 ARG LYS HIS LYS TYR GLY VAL GLY ALA PHE ASN VAL ASN SEQRES 3 B 323 ASN MET GLU GLN ILE GLN GLY ILE MET LYS ALA VAL VAL SEQRES 4 B 323 GLN LEU LYS SER PRO VAL ILE LEU GLN CYS SER ARG GLY SEQRES 5 B 323 ALA LEU LYS TYR SER ASP MET ILE TYR LEU LYS LYS LEU SEQRES 6 B 323 CYS GLU ALA ALA LEU GLU LYS HIS PRO ASP ILE PRO ILE SEQRES 7 B 323 CYS ILE HIS LEU ASP HIS GLY ASP THR LEU GLU SER VAL SEQRES 8 B 323 LYS MET ALA ILE ASP LEU GLY PHE SER SER VAL MET ILE SEQRES 9 B 323 ASP ALA SER HIS HIS PRO PHE ASP GLU ASN VAL ARG ILE SEQRES 10 B 323 THR LYS GLU VAL VAL ALA TYR ALA HIS ALA ARG SER VAL SEQRES 11 B 323 SER VAL GLU ALA GLU LEU GLY THR LEU GLY GLY ILE GLU SEQRES 12 B 323 GLU ASP VAL GLN ASN THR VAL GLN LEU THR GLU PRO GLN SEQRES 13 B 323 ASP ALA LYS LYS PHE VAL GLU LEU THR GLY VAL ASP ALA SEQRES 14 B 323 LEU ALA VAL ALA ILE GLY THR SER HIS GLY ALA TYR LYS SEQRES 15 B 323 PHE LYS SER GLU SER ASP ILE ARG LEU ALA ILE ASP ARG SEQRES 16 B 323 VAL LYS THR ILE SER ASP LEU THR GLY ILE PRO LEU VAL SEQRES 17 B 323 MET HIS GLY SER SER SER VAL PRO LYS ASP VAL LYS ASP SEQRES 18 B 323 MET ILE ASN LYS TYR GLY GLY LYS MET PRO ASP ALA VAL SEQRES 19 B 323 GLY VAL PRO ILE GLU SER ILE VAL HIS ALA ILE GLY GLU SEQRES 20 B 323 GLY VAL CYS LYS ILE ASN VAL ASP SER ASP SER ARG MET SEQRES 21 B 323 ALA MET THR GLY ALA ILE ARG LYS VAL PHE VAL GLU HIS SEQRES 22 B 323 PRO GLU LYS PHE ASP PRO ARG ASP TYR LEU GLY PRO GLY SEQRES 23 B 323 ARG ASP ALA ILE THR GLU MET LEU ILE PRO LYS ILE LYS SEQRES 24 B 323 ALA PHE GLY SER ALA GLY HIS ALA GLY ASP TYR LYS VAL SEQRES 25 B 323 VAL SER LEU GLU GLU ALA LYS ALA TRP TYR LYS HET ZN A 340 1 HET HDX A 341 20 HET ZN B 342 1 HET HDX B 343 20 HETNAM ZN ZINC ION HETNAM HDX ({3-HYDROXY-2-OXO-4-[2-(PHOSPHONOOXY)ETHYL]PYRIDIN- HETNAM 2 HDX 1(2H)-YL}METHYL)PHOSPHONIC ACID FORMUL 3 ZN 2(ZN 2+) FORMUL 4 HDX 2(C8 H13 N O9 P2) FORMUL 7 HOH *339(H2 O) HELIX 1 1 THR A 5 LYS A 17 1 13 HELIX 2 2 ASN A 27 LEU A 41 1 15 HELIX 3 3 SER A 50 SER A 57 1 8 HELIX 4 4 MET A 59 HIS A 73 1 15 HELIX 5 5 THR A 87 LEU A 97 1 11 HELIX 6 6 PRO A 110 ALA A 127 1 18 HELIX 7 7 GLU A 154 GLY A 166 1 13 HELIX 8 8 ALA A 192 ASP A 194 5 3 HELIX 9 9 ARG A 195 GLY A 204 1 10 HELIX 10 10 PRO A 216 TYR A 226 1 11 HELIX 11 11 PRO A 237 GLU A 247 1 11 HELIX 12 12 ASP A 255 HIS A 273 1 19 HELIX 13 13 PRO A 279 GLY A 302 1 24 HELIX 14 14 SER A 314 LYS A 323 1 10 HELIX 15 15 THR B 5 LYS B 17 1 13 HELIX 16 16 ASN B 27 LEU B 41 1 15 HELIX 17 17 ARG B 51 SER B 57 1 7 HELIX 18 18 MET B 59 HIS B 73 1 15 HELIX 19 19 THR B 87 LEU B 97 1 11 HELIX 20 20 PRO B 110 ARG B 128 1 19 HELIX 21 21 GLU B 154 GLY B 166 1 13 HELIX 22 22 ILE B 193 GLY B 204 1 12 HELIX 23 23 PRO B 216 TYR B 226 1 11 HELIX 24 24 PRO B 237 GLU B 247 1 11 HELIX 25 25 ASP B 255 HIS B 273 1 19 HELIX 26 26 PRO B 279 GLY B 302 1 24 HELIX 27 27 SER B 314 LYS B 319 1 6 HELIX 28 28 ALA B 320 LYS B 323 5 4 SHEET 1 A 9 VAL A 20 ASN A 24 0 SHEET 2 A 9 VAL A 45 CYS A 49 1 O ILE A 46 N PHE A 23 SHEET 3 A 9 ILE A 78 GLY A 85 1 O CYS A 79 N LEU A 47 SHEET 4 A 9 SER A 101 ILE A 104 1 O SER A 101 N LEU A 82 SHEET 5 A 9 SER A 131 LEU A 136 1 O SER A 131 N VAL A 102 SHEET 6 A 9 ALA A 169 VAL A 172 1 O ALA A 171 N ALA A 134 SHEET 7 A 9 LEU A 207 MET A 209 1 O VAL A 208 N LEU A 170 SHEET 8 A 9 VAL A 249 VAL A 254 1 O ASN A 253 N MET A 209 SHEET 9 A 9 VAL A 20 ASN A 24 1 N ALA A 22 O ILE A 252 SHEET 1 B 9 VAL B 20 ASN B 24 0 SHEET 2 B 9 VAL B 45 SER B 50 1 O ILE B 46 N PHE B 23 SHEET 3 B 9 ILE B 78 GLY B 85 1 O CYS B 79 N LEU B 47 SHEET 4 B 9 SER B 101 ILE B 104 1 O MET B 103 N GLY B 85 SHEET 5 B 9 SER B 131 GLU B 135 1 O GLU B 133 N VAL B 102 SHEET 6 B 9 ALA B 169 ALA B 171 1 O ALA B 171 N ALA B 134 SHEET 7 B 9 LEU B 207 MET B 209 1 O VAL B 208 N LEU B 170 SHEET 8 B 9 VAL B 249 VAL B 254 1 O CYS B 250 N LEU B 207 SHEET 9 B 9 VAL B 20 ASN B 24 1 N ALA B 22 O ILE B 252 LINK NE2 HIS A 84 ZN ZN A 340 1555 1555 2.19 LINK NE2 HIS A 178 ZN ZN A 340 1555 1555 2.22 LINK ND1 HIS A 210 ZN ZN A 340 1555 1555 2.55 LINK ZN ZN A 340 OAD HDX A 341 1555 1555 2.56 LINK NE2 HIS B 84 ZN ZN B 342 1555 1555 2.64 LINK NE2 HIS B 178 ZN ZN B 342 1555 1555 2.39 SITE 1 AC1 4 HIS A 84 HIS A 178 HIS A 210 HDX A 341 SITE 1 AC2 17 ASN A 24 SER A 50 ASP A 83 HIS A 84 SITE 2 AC2 17 HIS A 178 GLY A 179 LYS A 182 GLY A 211 SITE 3 AC2 17 SER A 212 SER A 213 ASN A 253 ASP A 255 SITE 4 AC2 17 SER A 256 ARG A 259 ZN A 340 HOH A 389 SITE 5 AC2 17 ARG B 280 SITE 1 AC3 4 HIS B 84 HIS B 178 HIS B 210 HDX B 343 SITE 1 AC4 18 ARG A 280 ASN B 24 GLN B 48 SER B 50 SITE 2 AC4 18 ASP B 83 HIS B 84 HIS B 178 GLY B 179 SITE 3 AC4 18 LYS B 182 GLY B 211 SER B 212 SER B 213 SITE 4 AC4 18 ASN B 253 ASP B 255 SER B 256 ARG B 259 SITE 5 AC4 18 ZN B 342 HOH B 420 CRYST1 53.580 64.950 171.450 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018664 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015396 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005833 0.00000