HEADER TRANSFERASE 17-AUG-10 3OHP TITLE CRYSTAL STRUCTURE OF HGPRT FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.4.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: HPT, VC_0585; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: LIC-PET30A KEYWDS STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 2 SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, KEYWDS 3 PHOSPHORIBOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KIM,U.A.RAMAGOPAL,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 4 06-SEP-23 3OHP 1 REMARK REVDAT 3 10-FEB-21 3OHP 1 AUTHOR JRNL REVDAT 2 17-AUG-11 3OHP 1 REMARK VERSN REVDAT 1 01-SEP-10 3OHP 0 JRNL AUTH J.KIM,U.A.RAMAGOPAL,S.C.ALMO,S.K.BURLEY JRNL TITL CRYSTAL STRUCTURE OF HGPRT FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 44269 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2360 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3128 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5323 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 269 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.91000 REMARK 3 B22 (A**2) : -1.64000 REMARK 3 B33 (A**2) : 2.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.576 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5448 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7373 ; 1.444 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 670 ; 6.029 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 258 ;34.167 ;24.186 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1014 ;15.789 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;17.404 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 872 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4025 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3342 ; 0.755 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5451 ; 1.405 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2106 ; 2.386 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1922 ; 3.805 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2460 0.4310 1.6730 REMARK 3 T TENSOR REMARK 3 T11: 0.0333 T22: 0.0596 REMARK 3 T33: 0.0057 T12: -0.0006 REMARK 3 T13: -0.0042 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.1946 L22: 1.5210 REMARK 3 L33: 0.5937 L12: 0.3315 REMARK 3 L13: -0.1162 L23: -0.0340 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: 0.0733 S13: -0.0034 REMARK 3 S21: -0.0144 S22: 0.0090 S23: -0.0617 REMARK 3 S31: -0.0001 S32: 0.0197 S33: 0.0107 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9400 2.6630 8.6290 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0398 REMARK 3 T33: 0.0126 T12: -0.0116 REMARK 3 T13: 0.0068 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.5010 L22: 1.3095 REMARK 3 L33: 0.5160 L12: -0.2547 REMARK 3 L13: -0.0139 L23: -0.3075 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: -0.0893 S13: 0.0484 REMARK 3 S21: 0.0826 S22: -0.0047 S23: 0.0961 REMARK 3 S31: -0.0174 S32: 0.0299 S33: 0.0023 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -10 C 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9390 38.2910 -0.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0324 REMARK 3 T33: 0.0703 T12: 0.0078 REMARK 3 T13: 0.0054 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 0.9246 L22: 2.8318 REMARK 3 L33: 0.7654 L12: -0.5436 REMARK 3 L13: -0.0051 L23: -0.0579 REMARK 3 S TENSOR REMARK 3 S11: -0.0531 S12: -0.0768 S13: 0.0310 REMARK 3 S21: 0.1552 S22: 0.0033 S23: -0.1767 REMARK 3 S31: 0.0375 S32: 0.0280 S33: 0.0498 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D -10 D 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -8.7680 35.8090 -10.1030 REMARK 3 T TENSOR REMARK 3 T11: 0.0179 T22: 0.0327 REMARK 3 T33: 0.1072 T12: 0.0057 REMARK 3 T13: -0.0327 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.1479 L22: 2.7596 REMARK 3 L33: 0.7945 L12: 0.2117 REMARK 3 L13: -0.2884 L23: -0.5418 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.1225 S13: -0.0362 REMARK 3 S21: -0.2158 S22: 0.0013 S23: 0.4515 REMARK 3 S31: 0.0378 S32: -0.0108 S33: -0.0044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061129. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0750 REMARK 200 MONOCHROMATOR : DOUBLE SILICON(111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35300 REMARK 200 R SYM FOR SHELL (I) : 0.29400 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 10.2.23 REMARK 200 STARTING MODEL: 1G9S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PH 5.5, 20% PEG3000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 72.60650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 69 REMARK 465 GLY A 70 REMARK 465 ASN A 71 REMARK 465 SER A 72 REMARK 465 MET A 73 REMARK 465 GLN A 74 REMARK 465 SER A 75 REMARK 465 SER A 76 REMARK 465 GLU A 177 REMARK 465 MET B 1 REMARK 465 TYR B 69 REMARK 465 GLY B 70 REMARK 465 ASN B 71 REMARK 465 SER B 72 REMARK 465 MET B 73 REMARK 465 GLN B 74 REMARK 465 SER B 75 REMARK 465 SER B 76 REMARK 465 GLU B 177 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 TYR C 69 REMARK 465 GLY C 70 REMARK 465 ASN C 71 REMARK 465 SER C 72 REMARK 465 MET C 73 REMARK 465 GLN C 74 REMARK 465 SER C 75 REMARK 465 GLU C 177 REMARK 465 MET D 1 REMARK 465 SER D 68 REMARK 465 TYR D 69 REMARK 465 GLY D 70 REMARK 465 ASN D 71 REMARK 465 SER D 72 REMARK 465 MET D 73 REMARK 465 GLN D 74 REMARK 465 SER D 75 REMARK 465 SER D 76 REMARK 465 GLU D 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 SER C 76 OG REMARK 470 LEU C 175 CG CD1 CD2 REMARK 470 LYS D 2 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 56 57.21 -92.20 REMARK 500 ASP A 102 -79.57 -121.82 REMARK 500 GLN A 161 -11.66 68.93 REMARK 500 LEU A 175 -155.94 -101.92 REMARK 500 HIS B 56 54.44 -106.20 REMARK 500 ASP B 102 -80.81 -117.98 REMARK 500 GLN B 161 -5.04 70.40 REMARK 500 ASP C 102 -76.59 -123.12 REMARK 500 GLN C 161 -6.69 78.47 REMARK 500 HIS D 56 51.36 -100.69 REMARK 500 ASP D 102 -80.93 -118.79 REMARK 500 GLN D 161 -7.51 78.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-13969A RELATED DB: TARGETDB DBREF 3OHP A 1 177 UNP Q9KUD7 Q9KUD7_VIBCH 1 177 DBREF 3OHP B 1 177 UNP Q9KUD7 Q9KUD7_VIBCH 1 177 DBREF 3OHP C 1 177 UNP Q9KUD7 Q9KUD7_VIBCH 1 177 DBREF 3OHP D 1 177 UNP Q9KUD7 Q9KUD7_VIBCH 1 177 SEQRES 1 A 177 MET LYS HIS THR VAL GLU VAL MET ILE SER GLU GLN GLU SEQRES 2 A 177 VAL ALA GLN ARG ILE ARG GLU LEU GLY GLN GLN ILE THR SEQRES 3 A 177 GLU HIS TYR GLN GLY SER SER ASP LEU VAL LEU VAL GLY SEQRES 4 A 177 LEU LEU ARG GLY SER PHE VAL PHE MET ALA ASP LEU ALA SEQRES 5 A 177 ARG GLN ILE HIS LEU THR HIS GLN VAL ASP PHE MET THR SEQRES 6 A 177 ALA SER SER TYR GLY ASN SER MET GLN SER SER ARG ASP SEQRES 7 A 177 VAL ARG ILE LEU LYS ASP LEU ASP ASP ASP ILE LYS GLY SEQRES 8 A 177 LYS ASP VAL LEU LEU VAL GLU ASP ILE ILE ASP THR GLY SEQRES 9 A 177 ASN THR LEU ASN LYS VAL LYS GLU ILE LEU ALA LEU ARG SEQRES 10 A 177 GLU PRO LYS SER ILE ARG ILE CYS THR LEU LEU ASP LYS SEQRES 11 A 177 PRO THR ARG ARG GLU VAL ASP VAL GLU VAL ASN TRP VAL SEQRES 12 A 177 GLY PHE GLU ILE PRO ASP GLU PHE VAL VAL GLY VAL GLY SEQRES 13 A 177 ILE ASP TYR ALA GLN LYS TYR ARG HIS LEU PRO TYR ILE SEQRES 14 A 177 GLY LYS VAL VAL PRO LEU ALA GLU SEQRES 1 B 177 MET LYS HIS THR VAL GLU VAL MET ILE SER GLU GLN GLU SEQRES 2 B 177 VAL ALA GLN ARG ILE ARG GLU LEU GLY GLN GLN ILE THR SEQRES 3 B 177 GLU HIS TYR GLN GLY SER SER ASP LEU VAL LEU VAL GLY SEQRES 4 B 177 LEU LEU ARG GLY SER PHE VAL PHE MET ALA ASP LEU ALA SEQRES 5 B 177 ARG GLN ILE HIS LEU THR HIS GLN VAL ASP PHE MET THR SEQRES 6 B 177 ALA SER SER TYR GLY ASN SER MET GLN SER SER ARG ASP SEQRES 7 B 177 VAL ARG ILE LEU LYS ASP LEU ASP ASP ASP ILE LYS GLY SEQRES 8 B 177 LYS ASP VAL LEU LEU VAL GLU ASP ILE ILE ASP THR GLY SEQRES 9 B 177 ASN THR LEU ASN LYS VAL LYS GLU ILE LEU ALA LEU ARG SEQRES 10 B 177 GLU PRO LYS SER ILE ARG ILE CYS THR LEU LEU ASP LYS SEQRES 11 B 177 PRO THR ARG ARG GLU VAL ASP VAL GLU VAL ASN TRP VAL SEQRES 12 B 177 GLY PHE GLU ILE PRO ASP GLU PHE VAL VAL GLY VAL GLY SEQRES 13 B 177 ILE ASP TYR ALA GLN LYS TYR ARG HIS LEU PRO TYR ILE SEQRES 14 B 177 GLY LYS VAL VAL PRO LEU ALA GLU SEQRES 1 C 177 MET LYS HIS THR VAL GLU VAL MET ILE SER GLU GLN GLU SEQRES 2 C 177 VAL ALA GLN ARG ILE ARG GLU LEU GLY GLN GLN ILE THR SEQRES 3 C 177 GLU HIS TYR GLN GLY SER SER ASP LEU VAL LEU VAL GLY SEQRES 4 C 177 LEU LEU ARG GLY SER PHE VAL PHE MET ALA ASP LEU ALA SEQRES 5 C 177 ARG GLN ILE HIS LEU THR HIS GLN VAL ASP PHE MET THR SEQRES 6 C 177 ALA SER SER TYR GLY ASN SER MET GLN SER SER ARG ASP SEQRES 7 C 177 VAL ARG ILE LEU LYS ASP LEU ASP ASP ASP ILE LYS GLY SEQRES 8 C 177 LYS ASP VAL LEU LEU VAL GLU ASP ILE ILE ASP THR GLY SEQRES 9 C 177 ASN THR LEU ASN LYS VAL LYS GLU ILE LEU ALA LEU ARG SEQRES 10 C 177 GLU PRO LYS SER ILE ARG ILE CYS THR LEU LEU ASP LYS SEQRES 11 C 177 PRO THR ARG ARG GLU VAL ASP VAL GLU VAL ASN TRP VAL SEQRES 12 C 177 GLY PHE GLU ILE PRO ASP GLU PHE VAL VAL GLY VAL GLY SEQRES 13 C 177 ILE ASP TYR ALA GLN LYS TYR ARG HIS LEU PRO TYR ILE SEQRES 14 C 177 GLY LYS VAL VAL PRO LEU ALA GLU SEQRES 1 D 177 MET LYS HIS THR VAL GLU VAL MET ILE SER GLU GLN GLU SEQRES 2 D 177 VAL ALA GLN ARG ILE ARG GLU LEU GLY GLN GLN ILE THR SEQRES 3 D 177 GLU HIS TYR GLN GLY SER SER ASP LEU VAL LEU VAL GLY SEQRES 4 D 177 LEU LEU ARG GLY SER PHE VAL PHE MET ALA ASP LEU ALA SEQRES 5 D 177 ARG GLN ILE HIS LEU THR HIS GLN VAL ASP PHE MET THR SEQRES 6 D 177 ALA SER SER TYR GLY ASN SER MET GLN SER SER ARG ASP SEQRES 7 D 177 VAL ARG ILE LEU LYS ASP LEU ASP ASP ASP ILE LYS GLY SEQRES 8 D 177 LYS ASP VAL LEU LEU VAL GLU ASP ILE ILE ASP THR GLY SEQRES 9 D 177 ASN THR LEU ASN LYS VAL LYS GLU ILE LEU ALA LEU ARG SEQRES 10 D 177 GLU PRO LYS SER ILE ARG ILE CYS THR LEU LEU ASP LYS SEQRES 11 D 177 PRO THR ARG ARG GLU VAL ASP VAL GLU VAL ASN TRP VAL SEQRES 12 D 177 GLY PHE GLU ILE PRO ASP GLU PHE VAL VAL GLY VAL GLY SEQRES 13 D 177 ILE ASP TYR ALA GLN LYS TYR ARG HIS LEU PRO TYR ILE SEQRES 14 D 177 GLY LYS VAL VAL PRO LEU ALA GLU FORMUL 5 HOH *269(H2 O) HELIX 1 1 SER A 10 TYR A 29 1 20 HELIX 2 2 SER A 44 GLN A 54 1 11 HELIX 3 3 GLY A 104 LEU A 116 1 13 HELIX 4 4 PRO A 131 ARG A 134 5 4 HELIX 5 5 SER B 10 TYR B 29 1 20 HELIX 6 6 SER B 44 ARG B 53 1 10 HELIX 7 7 GLY B 104 LEU B 116 1 13 HELIX 8 8 PRO B 131 ARG B 134 5 4 HELIX 9 9 SER C 10 TYR C 29 1 20 HELIX 10 10 SER C 44 GLN C 54 1 11 HELIX 11 11 GLY C 104 LEU C 116 1 13 HELIX 12 12 PRO C 131 ARG C 134 5 4 HELIX 13 13 SER D 10 TYR D 29 1 20 HELIX 14 14 SER D 44 ARG D 53 1 10 HELIX 15 15 GLY D 104 LEU D 116 1 13 HELIX 16 16 PRO D 131 ARG D 134 5 4 SHEET 1 A 3 HIS A 3 ILE A 9 0 SHEET 2 A 3 ILE A 169 PRO A 174 -1 O VAL A 173 N THR A 4 SHEET 3 A 3 VAL A 152 VAL A 153 -1 N VAL A 153 O GLY A 170 SHEET 1 B 6 ILE A 81 LYS A 83 0 SHEET 2 B 6 GLN A 60 ALA A 66 -1 N THR A 65 O LYS A 83 SHEET 3 B 6 LEU A 35 LEU A 40 1 N LEU A 37 O ASP A 62 SHEET 4 B 6 ASP A 93 ILE A 101 1 O VAL A 97 N VAL A 38 SHEET 5 B 6 SER A 121 ASP A 129 1 O SER A 121 N VAL A 94 SHEET 6 B 6 TRP A 142 GLU A 146 1 O TRP A 142 N THR A 126 SHEET 1 C 3 HIS B 3 ILE B 9 0 SHEET 2 C 3 ILE B 169 PRO B 174 -1 O VAL B 173 N THR B 4 SHEET 3 C 3 VAL B 152 VAL B 153 -1 N VAL B 153 O GLY B 170 SHEET 1 D 6 ILE B 81 LYS B 83 0 SHEET 2 D 6 GLN B 60 ALA B 66 -1 N THR B 65 O LYS B 83 SHEET 3 D 6 LEU B 35 LEU B 40 1 N LEU B 37 O GLN B 60 SHEET 4 D 6 ASP B 93 ILE B 101 1 O VAL B 97 N VAL B 38 SHEET 5 D 6 SER B 121 ASP B 129 1 O ARG B 123 N LEU B 96 SHEET 6 D 6 TRP B 142 GLU B 146 1 O PHE B 145 N LEU B 127 SHEET 1 E 3 THR C 4 ILE C 9 0 SHEET 2 E 3 ILE C 169 VAL C 173 -1 O VAL C 173 N THR C 4 SHEET 3 E 3 VAL C 152 VAL C 153 -1 N VAL C 153 O GLY C 170 SHEET 1 F 6 ARG C 80 LYS C 83 0 SHEET 2 F 6 GLN C 60 SER C 67 -1 N THR C 65 O LYS C 83 SHEET 3 F 6 LEU C 35 LEU C 40 1 N LEU C 37 O ASP C 62 SHEET 4 F 6 ASP C 93 ILE C 101 1 O LEU C 95 N VAL C 38 SHEET 5 F 6 SER C 121 ASP C 129 1 O SER C 121 N VAL C 94 SHEET 6 F 6 TRP C 142 GLU C 146 1 O GLY C 144 N THR C 126 SHEET 1 G 3 HIS D 3 ILE D 9 0 SHEET 2 G 3 ILE D 169 PRO D 174 -1 O VAL D 173 N THR D 4 SHEET 3 G 3 VAL D 152 VAL D 153 -1 N VAL D 153 O GLY D 170 SHEET 1 H 6 ILE D 81 LYS D 83 0 SHEET 2 H 6 GLN D 60 ALA D 66 -1 N THR D 65 O LYS D 83 SHEET 3 H 6 LEU D 35 LEU D 40 1 N LEU D 35 O GLN D 60 SHEET 4 H 6 ASP D 93 ILE D 101 1 O VAL D 97 N VAL D 38 SHEET 5 H 6 SER D 121 ASP D 129 1 O ARG D 123 N LEU D 96 SHEET 6 H 6 TRP D 142 GLU D 146 1 O GLY D 144 N THR D 126 CISPEP 1 LEU A 41 ARG A 42 0 2.24 CISPEP 2 LEU B 41 ARG B 42 0 -4.30 CISPEP 3 LEU C 41 ARG C 42 0 -3.29 CISPEP 4 LEU D 41 ARG D 42 0 -2.99 CRYST1 50.511 145.213 51.611 90.00 94.76 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019798 0.000000 0.001650 0.00000 SCALE2 0.000000 0.006886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019443 0.00000