HEADER SUGAR BINDING PROTEIN 21-AUG-10 3OJB TITLE CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF HUMAN GALECTIN-8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALECTIN-8; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 SYNONYM: GAL-8, PROSTATE CARCINOMA TUMOR ANTIGEN 1, PCTA-1, PO66 COMPND 6 CARBOHYDRATE-BINDING PROTEIN, PO66-CBP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LGALS8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P28 KEYWDS JELLY-ROLL, SUGAR BINDING PROTEIN, CARBOHYDRATE/SUGAR BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,M.TENG,L.NIU REVDAT 2 01-NOV-23 3OJB 1 SEQADV REVDAT 1 07-SEP-11 3OJB 0 JRNL AUTH D.ZHOU,M.TENG,L.NIU JRNL TITL CRYSTAL STRUCTURE OF C-TERMINAL CARBOHYDRATE RECOGNITION JRNL TITL 2 DOMAIN OF HUMAN GALECTIN-8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0104 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 12427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 666 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 641 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.3790 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4192 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.48000 REMARK 3 B22 (A**2) : 0.71000 REMARK 3 B33 (A**2) : 0.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.541 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.375 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 48.173 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.892 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.813 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4284 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5780 ; 1.214 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 520 ; 6.108 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;33.609 ;23.654 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 756 ;19.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;20.450 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 632 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3252 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2608 ; 0.068 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4216 ; 0.131 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1676 ; 0.273 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1564 ; 0.414 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1048 ; 0.38 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1048 ; 0.41 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1048 ; 0.34 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1048 ; 0.35 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1048 ; 0.16 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1048 ; 0.14 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1048 ; 0.12 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1048 ; 0.13 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1028 31.1067 14.9782 REMARK 3 T TENSOR REMARK 3 T11: 0.0782 T22: 0.3144 REMARK 3 T33: 0.1495 T12: 0.0010 REMARK 3 T13: -0.0075 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.6462 L22: 1.1862 REMARK 3 L33: 4.3737 L12: -0.5087 REMARK 3 L13: -0.0678 L23: 0.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.1315 S12: -0.0367 S13: 0.1379 REMARK 3 S21: 0.0734 S22: 0.0957 S23: 0.0325 REMARK 3 S31: -0.1000 S32: 0.0203 S33: 0.0358 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): 35.3703 26.3249 25.8666 REMARK 3 T TENSOR REMARK 3 T11: 0.1166 T22: 0.3095 REMARK 3 T33: 0.1466 T12: -0.0006 REMARK 3 T13: 0.0033 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.3889 L22: 2.0412 REMARK 3 L33: 3.2888 L12: 0.4393 REMARK 3 L13: 0.0407 L23: 0.2873 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: 0.0336 S13: -0.0867 REMARK 3 S21: 0.1541 S22: 0.0401 S23: 0.1477 REMARK 3 S31: 0.0202 S32: -0.0706 S33: 0.0223 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 9 C 139 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2071 16.5431 53.0287 REMARK 3 T TENSOR REMARK 3 T11: 0.2251 T22: 0.3641 REMARK 3 T33: 0.2127 T12: -0.0177 REMARK 3 T13: 0.0328 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 3.6923 L22: 5.0383 REMARK 3 L33: 3.7270 L12: 0.0417 REMARK 3 L13: -0.8110 L23: 0.0466 REMARK 3 S TENSOR REMARK 3 S11: -0.0703 S12: -0.1531 S13: -0.4184 REMARK 3 S21: 0.0807 S22: -0.0806 S23: 0.1261 REMARK 3 S31: 0.4365 S32: 0.0410 S33: 0.1509 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 9 D 139 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0598 -0.9261 13.5722 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 0.3580 REMARK 3 T33: 0.3168 T12: -0.0207 REMARK 3 T13: 0.0522 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 2.0017 L22: 4.8990 REMARK 3 L33: 3.6936 L12: -0.5163 REMARK 3 L13: -0.1324 L23: 0.2611 REMARK 3 S TENSOR REMARK 3 S11: -0.0842 S12: -0.1239 S13: -0.4157 REMARK 3 S21: 0.2089 S22: 0.0720 S23: -0.0462 REMARK 3 S31: 0.4915 S32: -0.1049 S33: 0.0122 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 D 143 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7130 23.4589 23.1921 REMARK 3 T TENSOR REMARK 3 T11: 0.4973 T22: 0.2586 REMARK 3 T33: 0.0939 T12: 0.0504 REMARK 3 T13: 0.2096 T23: 0.0516 REMARK 3 L TENSOR REMARK 3 L11: 0.0835 L22: 0.1524 REMARK 3 L33: 0.1635 L12: 0.0438 REMARK 3 L13: 0.0640 L23: 0.1449 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: -0.0546 S13: -0.0258 REMARK 3 S21: 0.2428 S22: -0.0205 S23: 0.0914 REMARK 3 S31: 0.1993 S32: 0.0443 S33: 0.0567 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OJB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000061187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13191 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.006 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 5.490 REMARK 200 R MERGE (I) : 0.21900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.41300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YV8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27.5% PEG 8000, 0.2M AMMONIUM REMARK 280 PHOSPHATE, 6.5% ETHYLENE GLYCOL, 0.1M NA CACODYLATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 281K, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 27.05250 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.60700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 27.05250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 89.60700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 HIS C 3 REMARK 465 HIS C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 HIS D 3 REMARK 465 HIS D 4 REMARK 465 HIS D 5 REMARK 465 HIS D 6 REMARK 465 HIS D 7 REMARK 465 HIS D 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 43 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 79 108.44 -44.58 REMARK 500 PRO B 10 122.38 -36.57 REMARK 500 ASN C 34 76.61 -105.52 REMARK 500 LYS C 36 -39.44 -134.55 REMARK 500 ASN C 79 104.33 -56.58 REMARK 500 REMARK 500 REMARK: NULL DBREF 3OJB A 10 139 UNP O00214 LEG8_HUMAN 186 315 DBREF 3OJB B 10 139 UNP O00214 LEG8_HUMAN 186 315 DBREF 3OJB C 10 139 UNP O00214 LEG8_HUMAN 186 315 DBREF 3OJB D 10 139 UNP O00214 LEG8_HUMAN 186 315 SEQADV 3OJB MET A 1 UNP O00214 EXPRESSION TAG SEQADV 3OJB GLY A 2 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 3 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 4 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 5 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 6 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 7 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS A 8 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET A 9 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET B 1 UNP O00214 EXPRESSION TAG SEQADV 3OJB GLY B 2 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 3 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 4 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 5 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 6 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 7 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS B 8 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET B 9 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET C 1 UNP O00214 EXPRESSION TAG SEQADV 3OJB GLY C 2 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 3 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 4 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 5 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 6 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 7 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS C 8 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET C 9 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET D 1 UNP O00214 EXPRESSION TAG SEQADV 3OJB GLY D 2 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 3 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 4 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 5 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 6 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 7 UNP O00214 EXPRESSION TAG SEQADV 3OJB HIS D 8 UNP O00214 EXPRESSION TAG SEQADV 3OJB MET D 9 UNP O00214 EXPRESSION TAG SEQRES 1 A 139 MET GLY HIS HIS HIS HIS HIS HIS MET PRO PHE ALA ALA SEQRES 2 A 139 ARG LEU ASN THR PRO MET GLY PRO GLY ARG THR VAL VAL SEQRES 3 A 139 VAL LYS GLY GLU VAL ASN ALA ASN ALA LYS SER PHE ASN SEQRES 4 A 139 VAL ASP LEU LEU ALA GLY LYS SER LYS ASP ILE ALA LEU SEQRES 5 A 139 HIS LEU ASN PRO ARG LEU ASN ILE LYS ALA PHE VAL ARG SEQRES 6 A 139 ASN SER PHE LEU GLN GLU SER TRP GLY GLU GLU GLU ARG SEQRES 7 A 139 ASN ILE THR SER PHE PRO PHE SER PRO GLY MET TYR PHE SEQRES 8 A 139 GLU MET ILE ILE TYR CYS ASP VAL ARG GLU PHE LYS VAL SEQRES 9 A 139 ALA VAL ASN GLY VAL HIS SER LEU GLU TYR LYS HIS ARG SEQRES 10 A 139 PHE LYS GLU LEU SER SER ILE ASP THR LEU GLU ILE ASN SEQRES 11 A 139 GLY ASP ILE HIS LEU LEU GLU VAL ARG SEQRES 1 B 139 MET GLY HIS HIS HIS HIS HIS HIS MET PRO PHE ALA ALA SEQRES 2 B 139 ARG LEU ASN THR PRO MET GLY PRO GLY ARG THR VAL VAL SEQRES 3 B 139 VAL LYS GLY GLU VAL ASN ALA ASN ALA LYS SER PHE ASN SEQRES 4 B 139 VAL ASP LEU LEU ALA GLY LYS SER LYS ASP ILE ALA LEU SEQRES 5 B 139 HIS LEU ASN PRO ARG LEU ASN ILE LYS ALA PHE VAL ARG SEQRES 6 B 139 ASN SER PHE LEU GLN GLU SER TRP GLY GLU GLU GLU ARG SEQRES 7 B 139 ASN ILE THR SER PHE PRO PHE SER PRO GLY MET TYR PHE SEQRES 8 B 139 GLU MET ILE ILE TYR CYS ASP VAL ARG GLU PHE LYS VAL SEQRES 9 B 139 ALA VAL ASN GLY VAL HIS SER LEU GLU TYR LYS HIS ARG SEQRES 10 B 139 PHE LYS GLU LEU SER SER ILE ASP THR LEU GLU ILE ASN SEQRES 11 B 139 GLY ASP ILE HIS LEU LEU GLU VAL ARG SEQRES 1 C 139 MET GLY HIS HIS HIS HIS HIS HIS MET PRO PHE ALA ALA SEQRES 2 C 139 ARG LEU ASN THR PRO MET GLY PRO GLY ARG THR VAL VAL SEQRES 3 C 139 VAL LYS GLY GLU VAL ASN ALA ASN ALA LYS SER PHE ASN SEQRES 4 C 139 VAL ASP LEU LEU ALA GLY LYS SER LYS ASP ILE ALA LEU SEQRES 5 C 139 HIS LEU ASN PRO ARG LEU ASN ILE LYS ALA PHE VAL ARG SEQRES 6 C 139 ASN SER PHE LEU GLN GLU SER TRP GLY GLU GLU GLU ARG SEQRES 7 C 139 ASN ILE THR SER PHE PRO PHE SER PRO GLY MET TYR PHE SEQRES 8 C 139 GLU MET ILE ILE TYR CYS ASP VAL ARG GLU PHE LYS VAL SEQRES 9 C 139 ALA VAL ASN GLY VAL HIS SER LEU GLU TYR LYS HIS ARG SEQRES 10 C 139 PHE LYS GLU LEU SER SER ILE ASP THR LEU GLU ILE ASN SEQRES 11 C 139 GLY ASP ILE HIS LEU LEU GLU VAL ARG SEQRES 1 D 139 MET GLY HIS HIS HIS HIS HIS HIS MET PRO PHE ALA ALA SEQRES 2 D 139 ARG LEU ASN THR PRO MET GLY PRO GLY ARG THR VAL VAL SEQRES 3 D 139 VAL LYS GLY GLU VAL ASN ALA ASN ALA LYS SER PHE ASN SEQRES 4 D 139 VAL ASP LEU LEU ALA GLY LYS SER LYS ASP ILE ALA LEU SEQRES 5 D 139 HIS LEU ASN PRO ARG LEU ASN ILE LYS ALA PHE VAL ARG SEQRES 6 D 139 ASN SER PHE LEU GLN GLU SER TRP GLY GLU GLU GLU ARG SEQRES 7 D 139 ASN ILE THR SER PHE PRO PHE SER PRO GLY MET TYR PHE SEQRES 8 D 139 GLU MET ILE ILE TYR CYS ASP VAL ARG GLU PHE LYS VAL SEQRES 9 D 139 ALA VAL ASN GLY VAL HIS SER LEU GLU TYR LYS HIS ARG SEQRES 10 D 139 PHE LYS GLU LEU SER SER ILE ASP THR LEU GLU ILE ASN SEQRES 11 D 139 GLY ASP ILE HIS LEU LEU GLU VAL ARG FORMUL 5 HOH *19(H2 O) HELIX 1 1 GLU A 120 ILE A 124 5 5 HELIX 2 2 GLU B 120 ILE B 124 5 5 HELIX 3 3 GLU C 120 ILE C 124 5 5 HELIX 4 4 GLU D 120 ILE D 124 5 5 SHEET 1 A 6 PHE A 11 ARG A 14 0 SHEET 2 A 6 THR A 126 GLY A 131 -1 O ILE A 129 N PHE A 11 SHEET 3 A 6 PHE A 38 LEU A 43 -1 N ASP A 41 O GLU A 128 SHEET 4 A 6 ILE A 50 ARG A 57 -1 O LEU A 52 N LEU A 42 SHEET 5 A 6 ALA A 62 LEU A 69 -1 O VAL A 64 N ASN A 55 SHEET 6 A 6 SER A 72 TRP A 73 -1 O SER A 72 N LEU A 69 SHEET 1 B 5 VAL A 109 LYS A 115 0 SHEET 2 B 5 GLU A 101 VAL A 106 -1 N VAL A 104 O LEU A 112 SHEET 3 B 5 TYR A 90 CYS A 97 -1 N TYR A 96 O LYS A 103 SHEET 4 B 5 THR A 24 VAL A 31 -1 N VAL A 27 O MET A 93 SHEET 5 B 5 ILE A 133 VAL A 138 -1 O GLU A 137 N LYS A 28 SHEET 1 C 6 PHE B 11 ARG B 14 0 SHEET 2 C 6 THR B 126 GLY B 131 -1 O ILE B 129 N PHE B 11 SHEET 3 C 6 PHE B 38 LEU B 43 -1 N ASP B 41 O GLU B 128 SHEET 4 C 6 ILE B 50 ARG B 57 -1 O LEU B 52 N LEU B 42 SHEET 5 C 6 ALA B 62 LEU B 69 -1 O VAL B 64 N ASN B 55 SHEET 6 C 6 SER B 72 TRP B 73 -1 O SER B 72 N LEU B 69 SHEET 1 D 5 VAL B 109 LYS B 115 0 SHEET 2 D 5 GLU B 101 VAL B 106 -1 N PHE B 102 O TYR B 114 SHEET 3 D 5 TYR B 90 CYS B 97 -1 N TYR B 96 O LYS B 103 SHEET 4 D 5 THR B 24 VAL B 31 -1 N VAL B 27 O MET B 93 SHEET 5 D 5 ILE B 133 VAL B 138 -1 O HIS B 134 N GLU B 30 SHEET 1 E 5 PHE C 11 ARG C 14 0 SHEET 2 E 5 THR C 126 GLY C 131 -1 O LEU C 127 N ALA C 13 SHEET 3 E 5 PHE C 38 ALA C 44 -1 N ASN C 39 O ASN C 130 SHEET 4 E 5 ASP C 49 ARG C 57 -1 O LEU C 54 N VAL C 40 SHEET 5 E 5 ALA C 62 PHE C 68 -1 O ALA C 62 N ARG C 57 SHEET 1 F 5 VAL C 109 LYS C 115 0 SHEET 2 F 5 GLU C 101 VAL C 106 -1 N PHE C 102 O TYR C 114 SHEET 3 F 5 MET C 89 CYS C 97 -1 N TYR C 96 O LYS C 103 SHEET 4 F 5 THR C 24 VAL C 31 -1 N VAL C 27 O MET C 93 SHEET 5 F 5 ILE C 133 VAL C 138 -1 O GLU C 137 N LYS C 28 SHEET 1 G 6 PHE D 11 ARG D 14 0 SHEET 2 G 6 THR D 126 GLY D 131 -1 O ILE D 129 N PHE D 11 SHEET 3 G 6 PHE D 38 ALA D 44 -1 N ASN D 39 O ASN D 130 SHEET 4 G 6 ASP D 49 ARG D 57 -1 O ASP D 49 N ALA D 44 SHEET 5 G 6 ALA D 62 LEU D 69 -1 O VAL D 64 N ASN D 55 SHEET 6 G 6 SER D 72 TRP D 73 -1 O SER D 72 N LEU D 69 SHEET 1 H 5 VAL D 109 LYS D 115 0 SHEET 2 H 5 GLU D 101 VAL D 106 -1 N PHE D 102 O TYR D 114 SHEET 3 H 5 TYR D 90 CYS D 97 -1 N TYR D 96 O LYS D 103 SHEET 4 H 5 THR D 24 VAL D 31 -1 N VAL D 27 O MET D 93 SHEET 5 H 5 ILE D 133 VAL D 138 -1 O GLU D 137 N LYS D 28 CISPEP 1 MET A 9 PRO A 10 0 6.31 CISPEP 2 MET B 9 PRO B 10 0 5.94 CISPEP 3 MET C 9 PRO C 10 0 -5.35 CISPEP 4 MET D 9 PRO D 10 0 14.23 CRYST1 54.105 73.148 179.214 90.00 90.00 90.00 P 21 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018483 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005580 0.00000