HEADER SIGNALING PROTEIN 26-AUG-10 3OLY TITLE STRUCTURAL AND FUNCTIONAL EFFECTS OF SUBSTITUTION AT POSITION T+1 IN TITLE 2 CHEY: CHEYA88M-BEF3-MN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHEMOTAXIS PROTEIN CHEY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: CHEY; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K0641 RECA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRS3 KEYWDS ALPHA-BETA REPEAT, CHEMOTAXIS, TWO-COMPONENT SIGNALING, RESPONSE KEYWDS 2 REGULATOR, CHEA, CHEZ, PHOSPHORYLATION, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.M.IMMORMINO,R.B.BOURRET REVDAT 4 06-SEP-23 3OLY 1 REMARK SEQADV LINK REVDAT 3 19-OCT-16 3OLY 1 JRNL REVDAT 2 21-SEP-16 3OLY 1 JRNL REVDAT 1 31-AUG-11 3OLY 0 JRNL AUTH R.M.IMMORMINO,R.E.SILVERSMITH,R.B.BOURRET JRNL TITL A VARIABLE ACTIVE SITE RESIDUE INFLUENCES THE KINETICS OF JRNL TITL 2 RESPONSE REGULATOR PHOSPHORYLATION AND DEPHOSPHORYLATION. JRNL REF BIOCHEMISTRY V. 55 5595 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27589219 JRNL DOI 10.1021/ACS.BIOCHEM.6B00645 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_336) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 28710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.340 REMARK 3 FREE R VALUE TEST SET COUNT : 1534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.7248 - 4.5523 0.99 2736 156 0.1560 0.1702 REMARK 3 2 4.5523 - 3.6162 1.00 2606 142 0.1277 0.1495 REMARK 3 3 3.6162 - 3.1599 1.00 2565 140 0.1632 0.1947 REMARK 3 4 3.1599 - 2.8713 0.99 2570 144 0.2086 0.2313 REMARK 3 5 2.8713 - 2.6657 0.98 2488 141 0.2155 0.2783 REMARK 3 6 2.6657 - 2.5087 0.98 2474 142 0.2147 0.2909 REMARK 3 7 2.5087 - 2.3831 0.96 2444 140 0.2159 0.2586 REMARK 3 8 2.3831 - 2.2795 0.95 2418 136 0.2139 0.2745 REMARK 3 9 2.2795 - 2.1917 0.93 2353 136 0.2247 0.2494 REMARK 3 10 2.1917 - 2.1161 0.91 2281 136 0.2434 0.2775 REMARK 3 11 2.1161 - 2.0500 0.89 2241 121 0.2828 0.3601 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 53.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.78440 REMARK 3 B22 (A**2) : 2.28320 REMARK 3 B33 (A**2) : 0.50120 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2093 REMARK 3 ANGLE : 1.063 2820 REMARK 3 CHIRALITY : 0.072 319 REMARK 3 PLANARITY : 0.004 363 REMARK 3 DIHEDRAL : 12.618 809 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OLY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000061282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : SAGITAL CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30464 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11400 REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67300 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3MYY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE 2.4 M GLYCEROL 2.5% REMARK 280 (V/V) TRIS 100 MM PH 8.0 MNCL2 20MM BECL2 1MM NAF 10MM 4.8 MG/ML REMARK 280 CHEY A88M 1-10-10, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.72250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.54100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.77350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.54100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.72250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.77350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 6 128.15 -39.71 REMARK 500 TRP A 58 -66.31 -103.15 REMARK 500 ASN A 62 -60.93 74.28 REMARK 500 TRP B 58 -65.86 -106.36 REMARK 500 ASN B 62 -59.06 73.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 131 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 13 OD1 REMARK 620 2 ASP A 57 OD2 86.3 REMARK 620 3 ASN A 59 O 86.5 90.9 REMARK 620 4 BEF A 130 F2 169.6 83.5 92.0 REMARK 620 5 HOH A 137 O 96.3 175.4 85.4 93.8 REMARK 620 6 HOH A 138 O 89.6 85.2 174.7 91.2 98.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF A 130 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 BEF A 130 F1 106.1 REMARK 620 3 BEF A 130 F2 102.9 115.4 REMARK 620 4 BEF A 130 F3 103.3 114.2 113.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 131 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 13 OD1 REMARK 620 2 ASP B 57 OD2 83.1 REMARK 620 3 ASN B 59 O 88.8 88.0 REMARK 620 4 BEF B 130 F2 165.4 82.6 94.1 REMARK 620 5 HOH B 139 O 103.4 173.2 90.3 91.0 REMARK 620 6 HOH B 142 O 84.5 83.7 169.9 90.6 98.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF B 130 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 57 OD1 REMARK 620 2 BEF B 130 F1 111.0 REMARK 620 3 BEF B 130 F2 101.8 112.5 REMARK 620 4 BEF B 130 F3 104.0 114.5 111.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF A 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF B 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 134 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FQW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ACTIVATED CHEY REMARK 900 RELATED ID: 3OLV RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL EFFECTS OF SUBSTITUTION AT POSITION T+1 REMARK 900 IN CHEY: CHEYA88V-BEF3-MG COMPLEX REMARK 900 RELATED ID: 3OLW RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL EFFECTS OF SUBSTITUTION AT POSITION T+1 REMARK 900 IN CHEY: CHEYA88T-BEF3-MG COMPLEX REMARK 900 RELATED ID: 3OLX RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL EFFECTS OF SUBSTITUTION AT POSITION T+1 REMARK 900 IN CHEY: CHEYA88S-BEF3-MG COMPLEX DBREF 3OLY A 1 129 UNP P0AE67 CHEY_ECOLI 1 129 DBREF 3OLY B 1 129 UNP P0AE67 CHEY_ECOLI 1 129 SEQADV 3OLY MET A 88 UNP P0AE67 ALA 88 ENGINEERED MUTATION SEQADV 3OLY MET B 88 UNP P0AE67 ALA 88 ENGINEERED MUTATION SEQRES 1 A 129 MET ALA ASP LYS GLU LEU LYS PHE LEU VAL VAL ASP ASP SEQRES 2 A 129 PHE SER THR MET ARG ARG ILE VAL ARG ASN LEU LEU LYS SEQRES 3 A 129 GLU LEU GLY PHE ASN ASN VAL GLU GLU ALA GLU ASP GLY SEQRES 4 A 129 VAL ASP ALA LEU ASN LYS LEU GLN ALA GLY GLY TYR GLY SEQRES 5 A 129 PHE VAL ILE SER ASP TRP ASN MET PRO ASN MET ASP GLY SEQRES 6 A 129 LEU GLU LEU LEU LYS THR ILE ARG ALA ASP GLY ALA MET SEQRES 7 A 129 SER ALA LEU PRO VAL LEU MET VAL THR MET GLU ALA LYS SEQRES 8 A 129 LYS GLU ASN ILE ILE ALA ALA ALA GLN ALA GLY ALA SER SEQRES 9 A 129 GLY TYR VAL VAL LYS PRO PHE THR ALA ALA THR LEU GLU SEQRES 10 A 129 GLU LYS LEU ASN LYS ILE PHE GLU LYS LEU GLY MET SEQRES 1 B 129 MET ALA ASP LYS GLU LEU LYS PHE LEU VAL VAL ASP ASP SEQRES 2 B 129 PHE SER THR MET ARG ARG ILE VAL ARG ASN LEU LEU LYS SEQRES 3 B 129 GLU LEU GLY PHE ASN ASN VAL GLU GLU ALA GLU ASP GLY SEQRES 4 B 129 VAL ASP ALA LEU ASN LYS LEU GLN ALA GLY GLY TYR GLY SEQRES 5 B 129 PHE VAL ILE SER ASP TRP ASN MET PRO ASN MET ASP GLY SEQRES 6 B 129 LEU GLU LEU LEU LYS THR ILE ARG ALA ASP GLY ALA MET SEQRES 7 B 129 SER ALA LEU PRO VAL LEU MET VAL THR MET GLU ALA LYS SEQRES 8 B 129 LYS GLU ASN ILE ILE ALA ALA ALA GLN ALA GLY ALA SER SEQRES 9 B 129 GLY TYR VAL VAL LYS PRO PHE THR ALA ALA THR LEU GLU SEQRES 10 B 129 GLU LYS LEU ASN LYS ILE PHE GLU LYS LEU GLY MET HET BEF A 130 4 HET MN A 131 1 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 505 6 HET MN A 132 1 HET MN A 133 1 HET BEF B 130 4 HET MN B 131 1 HET GOL B 501 6 HET GOL B 504 6 HET MN B 132 1 HET MN B 133 1 HET SO4 B 134 5 HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 BEF 2(BE F3 1-) FORMUL 4 MN 6(MN 2+) FORMUL 5 GOL 5(C3 H8 O3) FORMUL 16 SO4 O4 S 2- FORMUL 17 HOH *323(H2 O) HELIX 1 1 PHE A 14 GLY A 29 1 16 HELIX 2 2 ASP A 38 ALA A 48 1 11 HELIX 3 3 ASP A 64 ASP A 75 1 12 HELIX 4 4 LYS A 91 ALA A 101 1 11 HELIX 5 5 THR A 112 GLY A 128 1 17 HELIX 6 6 PHE B 14 GLY B 29 1 16 HELIX 7 7 ASP B 38 ALA B 48 1 11 HELIX 8 8 ASP B 64 ASP B 75 1 12 HELIX 9 9 LYS B 91 ALA B 101 1 11 HELIX 10 10 THR B 112 LEU B 127 1 16 SHEET 1 A 5 VAL A 33 ALA A 36 0 SHEET 2 A 5 PHE A 8 VAL A 11 1 N VAL A 10 O GLU A 34 SHEET 3 A 5 PHE A 53 SER A 56 1 O ILE A 55 N VAL A 11 SHEET 4 A 5 VAL A 83 THR A 87 1 O LEU A 84 N SER A 56 SHEET 5 A 5 GLY A 105 VAL A 108 1 O VAL A 107 N MET A 85 SHEET 1 B 5 VAL B 33 ALA B 36 0 SHEET 2 B 5 PHE B 8 VAL B 11 1 N VAL B 10 O GLU B 34 SHEET 3 B 5 PHE B 53 SER B 56 1 O ILE B 55 N VAL B 11 SHEET 4 B 5 VAL B 83 THR B 87 1 O LEU B 84 N VAL B 54 SHEET 5 B 5 GLY B 105 VAL B 108 1 O VAL B 107 N THR B 87 LINK OD1 ASP A 13 MN MN A 131 1555 1555 2.18 LINK OG ASER A 15 MN MN A 132 1555 1555 2.47 LINK OD1 ASP A 57 BE BEF A 130 1555 1555 1.73 LINK OD2 ASP A 57 MN MN A 131 1555 1555 2.06 LINK O ASN A 59 MN MN A 131 1555 1555 2.30 LINK F2 BEF A 130 MN MN A 131 1555 1555 2.19 LINK MN MN A 131 O HOH A 137 1555 1555 2.12 LINK MN MN A 131 O HOH A 138 1555 1555 2.34 LINK OD1 ASP B 13 MN MN B 131 1555 1555 2.25 LINK OD1 ASP B 57 BE BEF B 130 1555 1555 1.82 LINK OD2 ASP B 57 MN MN B 131 1555 1555 2.10 LINK O ASN B 59 MN MN B 131 1555 1555 2.25 LINK F2 BEF B 130 MN MN B 131 1555 1555 2.22 LINK MN MN B 131 O HOH B 139 1555 1555 2.17 LINK MN MN B 131 O HOH B 142 1555 1555 2.42 CISPEP 1 LYS A 109 PRO A 110 0 -5.63 CISPEP 2 LYS B 109 PRO B 110 0 -1.45 SITE 1 AC1 7 ASP A 57 TRP A 58 ASN A 59 THR A 87 SITE 2 AC1 7 MET A 88 LYS A 109 MN A 131 SITE 1 AC2 6 ASP A 13 ASP A 57 ASN A 59 BEF A 130 SITE 2 AC2 6 HOH A 137 HOH A 138 SITE 1 AC3 4 LYS A 7 ASN A 32 GLY A 50 HOH A 226 SITE 1 AC4 4 LYS A 91 LYS A 92 GLU A 93 HOH B 202 SITE 1 AC5 5 ARG A 19 LYS A 70 HOH A 157 HOH A 170 SITE 2 AC5 5 LYS B 126 SITE 1 AC6 1 SER A 15 SITE 1 AC7 1 GLY A 50 SITE 1 AC8 7 ASP B 57 TRP B 58 ASN B 59 THR B 87 SITE 2 AC8 7 MET B 88 LYS B 109 MN B 131 SITE 1 AC9 6 ASP B 13 ASP B 57 ASN B 59 BEF B 130 SITE 2 AC9 6 HOH B 139 HOH B 142 SITE 1 BC1 5 TRP B 58 ASN B 59 GLU B 89 ASN B 94 SITE 2 BC1 5 HOH B 312 SITE 1 BC2 4 LYS B 7 ASN B 32 GLY B 50 HOH B 284 SITE 1 BC3 1 SER B 15 SITE 1 BC4 2 LYS A 92 LYS B 92 SITE 1 BC5 6 ARG B 19 HOH B 175 HOH B 191 HOH B 223 SITE 2 BC5 6 HOH B 226 HOH B 287 CRYST1 53.445 53.547 161.082 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018711 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006208 0.00000