HEADER DNA BINDING PROTEIN/DNA 27-AUG-10 3ON0 TITLE CRYSTAL STRUCTURE OF THE PED208 TRAM-SBMA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TRAM; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SBMA; COMPND 7 CHAIN: P; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TRAM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: CHEMICALLY SYNTHESIZED OLIGO KEYWDS DNA BINDING PROTEIN, DNA PROTEIN-DNA COMPLEX, TETRAMER, COOPERATIVE KEYWDS 2 BINDING, UNWINDING OF DNA, KINKING OF DNA, PLASMID CONJUGATION, KEYWDS 3 BACTERIAL CONJUGATION, RIBBON-HELIX-HELIX, 4-HELIX BUNDLE, KEYWDS 4 TRANSCRIPTIONAL REPRESSOR, DNA, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.J.W.WONG,J.LU,R.A.EDWARDS,L.S.FROST,J.N.MARK GLOVER REVDAT 3 06-SEP-23 3ON0 1 REMARK REVDAT 2 07-SEP-11 3ON0 1 JRNL VERSN REVDAT 1 25-MAY-11 3ON0 0 JRNL AUTH J.J.WONG,J.LU,R.A.EDWARDS,L.S.FROST,J.N.GLOVER JRNL TITL STRUCTURAL BASIS OF COOPERATIVE DNA RECOGNITION BY THE JRNL TITL 2 PLASMID CONJUGATION FACTOR, TRAM. JRNL REF NUCLEIC ACIDS RES. V. 39 6775 2011 JRNL REFN ISSN 0305-1048 JRNL PMID 21565799 JRNL DOI 10.1093/NAR/GKR296 REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 26155 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1383 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1655 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.5020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3737 REMARK 3 NUCLEIC ACID ATOMS : 489 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.497 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.328 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.293 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.321 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4326 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5916 ; 1.348 ; 2.111 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 457 ; 4.485 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;32.358 ;25.632 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 742 ;21.349 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;23.352 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 678 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3014 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2306 ; 0.697 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3736 ; 1.286 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2020 ; 1.305 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2180 ; 2.197 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 4 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 61 A 98 3 REMARK 3 1 B 61 B 98 3 REMARK 3 1 C 61 C 98 3 REMARK 3 1 D 61 D 98 3 REMARK 3 2 A 102 A 118 3 REMARK 3 2 B 102 B 118 3 REMARK 3 2 C 102 C 118 3 REMARK 3 2 D 102 D 118 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 220 ; 0.040 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 B (A): 220 ; 0.040 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 C (A): 220 ; 0.050 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 D (A): 220 ; 0.030 ; 0.050 REMARK 3 LOOSE POSITIONAL 1 A (A): 219 ; 0.060 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 B (A): 219 ; 0.060 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 C (A): 219 ; 0.070 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 D (A): 219 ; 0.050 ; 5.000 REMARK 3 TIGHT THERMAL 1 A (A**2): 220 ; 0.080 ; 0.500 REMARK 3 TIGHT THERMAL 1 B (A**2): 220 ; 0.070 ; 0.500 REMARK 3 TIGHT THERMAL 1 C (A**2): 220 ; 0.090 ; 0.500 REMARK 3 TIGHT THERMAL 1 D (A**2): 220 ; 0.060 ; 0.500 REMARK 3 LOOSE THERMAL 1 A (A**2): 219 ; 0.100 ;10.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 219 ; 0.090 ;10.000 REMARK 3 LOOSE THERMAL 1 C (A**2): 219 ; 0.090 ;10.000 REMARK 3 LOOSE THERMAL 1 D (A**2): 219 ; 0.080 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B C A D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 2 B 47 3 REMARK 3 1 C 2 C 47 3 REMARK 3 1 A 2 A 47 3 REMARK 3 1 D 2 D 47 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 184 ; 0.030 ; 0.050 REMARK 3 TIGHT POSITIONAL 2 C (A): 184 ; 0.030 ; 0.050 REMARK 3 TIGHT POSITIONAL 2 A (A): 184 ; 0.030 ; 0.050 REMARK 3 TIGHT POSITIONAL 2 D (A): 184 ; 0.040 ; 0.050 REMARK 3 LOOSE POSITIONAL 2 B (A): 180 ; 0.090 ; 5.000 REMARK 3 LOOSE POSITIONAL 2 C (A): 180 ; 0.050 ; 5.000 REMARK 3 LOOSE POSITIONAL 2 A (A): 180 ; 0.040 ; 5.000 REMARK 3 LOOSE POSITIONAL 2 D (A): 180 ; 0.050 ; 5.000 REMARK 3 TIGHT THERMAL 2 B (A**2): 184 ; 0.040 ; 0.500 REMARK 3 TIGHT THERMAL 2 C (A**2): 184 ; 0.050 ; 0.500 REMARK 3 TIGHT THERMAL 2 A (A**2): 184 ; 0.060 ; 0.500 REMARK 3 TIGHT THERMAL 2 D (A**2): 184 ; 0.090 ; 0.500 REMARK 3 LOOSE THERMAL 2 B (A**2): 180 ; 0.050 ;10.000 REMARK 3 LOOSE THERMAL 2 C (A**2): 180 ; 0.060 ;10.000 REMARK 3 LOOSE THERMAL 2 A (A**2): 180 ; 0.050 ;10.000 REMARK 3 LOOSE THERMAL 2 D (A**2): 180 ; 0.080 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 48 A 52 3 REMARK 3 1 B 48 B 52 3 REMARK 3 1 C 48 C 52 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 20 ; 0.030 ; 0.050 REMARK 3 TIGHT POSITIONAL 3 B (A): 20 ; 0.030 ; 0.050 REMARK 3 TIGHT POSITIONAL 3 C (A): 20 ; 0.040 ; 0.050 REMARK 3 LOOSE POSITIONAL 3 A (A): 26 ; 0.050 ; 5.000 REMARK 3 LOOSE POSITIONAL 3 B (A): 26 ; 0.050 ; 5.000 REMARK 3 LOOSE POSITIONAL 3 C (A): 26 ; 0.040 ; 5.000 REMARK 3 TIGHT THERMAL 3 A (A**2): 20 ; 0.200 ; 0.500 REMARK 3 TIGHT THERMAL 3 B (A**2): 20 ; 0.210 ; 0.500 REMARK 3 TIGHT THERMAL 3 C (A**2): 20 ; 0.070 ; 0.500 REMARK 3 LOOSE THERMAL 3 A (A**2): 26 ; 0.090 ;10.000 REMARK 3 LOOSE THERMAL 3 B (A**2): 26 ; 0.120 ;10.000 REMARK 3 LOOSE THERMAL 3 C (A**2): 26 ; 0.070 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 99 A 101 3 REMARK 3 1 B 99 B 101 3 REMARK 3 1 D 99 D 101 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 12 ; 0.040 ; 0.050 REMARK 3 TIGHT POSITIONAL 4 B (A): 12 ; 0.040 ; 0.050 REMARK 3 TIGHT POSITIONAL 4 D (A): 12 ; 0.020 ; 0.050 REMARK 3 LOOSE POSITIONAL 4 A (A): 13 ; 0.110 ; 5.000 REMARK 3 LOOSE POSITIONAL 4 B (A): 13 ; 0.120 ; 5.000 REMARK 3 LOOSE POSITIONAL 4 D (A): 13 ; 0.030 ; 5.000 REMARK 3 TIGHT THERMAL 4 A (A**2): 12 ; 0.040 ; 0.500 REMARK 3 TIGHT THERMAL 4 B (A**2): 12 ; 0.040 ; 0.500 REMARK 3 TIGHT THERMAL 4 D (A**2): 12 ; 0.040 ; 0.500 REMARK 3 LOOSE THERMAL 4 A (A**2): 13 ; 0.050 ;10.000 REMARK 3 LOOSE THERMAL 4 B (A**2): 13 ; 0.070 ;10.000 REMARK 3 LOOSE THERMAL 4 D (A**2): 13 ; 0.050 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 61 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7840 12.8760 -1.8840 REMARK 3 T TENSOR REMARK 3 T11: 0.7139 T22: 0.1167 REMARK 3 T33: 0.2248 T12: 0.0418 REMARK 3 T13: -0.1040 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 2.6449 L22: 2.0772 REMARK 3 L33: 2.1212 L12: 0.8542 REMARK 3 L13: -0.4735 L23: -0.0922 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: 0.0089 S13: 0.2212 REMARK 3 S21: -0.1509 S22: -0.0588 S23: 0.4751 REMARK 3 S31: -0.0270 S32: -0.1991 S33: 0.0817 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 61 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0510 18.6790 -10.3550 REMARK 3 T TENSOR REMARK 3 T11: 1.0465 T22: 0.1270 REMARK 3 T33: 0.4437 T12: 0.0961 REMARK 3 T13: 0.2479 T23: 0.1406 REMARK 3 L TENSOR REMARK 3 L11: 2.6862 L22: 2.7371 REMARK 3 L33: 5.4403 L12: 1.7495 REMARK 3 L13: 1.0673 L23: 2.1580 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.4052 S13: 0.3121 REMARK 3 S21: -0.8604 S22: 0.1561 S23: -0.4873 REMARK 3 S31: -0.1439 S32: 0.4651 S33: -0.1591 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 61 C 118 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3020 9.3330 -5.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.7347 T22: 0.1027 REMARK 3 T33: 0.2188 T12: -0.0292 REMARK 3 T13: 0.0292 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.9089 L22: 4.4153 REMARK 3 L33: 2.3097 L12: 0.0008 REMARK 3 L13: 0.2377 L23: 1.6920 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: 0.1294 S13: -0.0343 REMARK 3 S21: -0.3930 S22: 0.1523 S23: -0.4272 REMARK 3 S31: 0.0712 S32: 0.1979 S33: -0.1994 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 61 D 118 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5290 22.1910 -6.6580 REMARK 3 T TENSOR REMARK 3 T11: 0.7455 T22: 0.1168 REMARK 3 T33: 0.2342 T12: 0.0257 REMARK 3 T13: -0.0013 T23: 0.1505 REMARK 3 L TENSOR REMARK 3 L11: 2.7833 L22: 4.5896 REMARK 3 L33: 5.2033 L12: -0.2760 REMARK 3 L13: 2.1156 L23: 1.2767 REMARK 3 S TENSOR REMARK 3 S11: 0.0883 S12: 0.2906 S13: 0.3293 REMARK 3 S21: -0.3530 S22: -0.0471 S23: 0.2393 REMARK 3 S31: -0.3244 S32: -0.1820 S33: -0.0413 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 1 P 24 REMARK 3 ORIGIN FOR THE GROUP (A): 46.0100 30.3150 42.0870 REMARK 3 T TENSOR REMARK 3 T11: 0.9874 T22: 0.1111 REMARK 3 T33: 0.2114 T12: 0.0609 REMARK 3 T13: -0.0937 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 5.6147 L22: 2.1560 REMARK 3 L33: 5.4844 L12: -0.1880 REMARK 3 L13: -3.7455 L23: -0.0427 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: 0.0772 S13: 0.1209 REMARK 3 S21: -0.0280 S22: -0.4000 S23: 0.0213 REMARK 3 S31: -0.1336 S32: -0.3287 S33: 0.3159 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 47 REMARK 3 ORIGIN FOR THE GROUP (A): 58.4040 25.3940 9.0840 REMARK 3 T TENSOR REMARK 3 T11: 1.1534 T22: 0.6016 REMARK 3 T33: 0.6108 T12: -0.1840 REMARK 3 T13: 0.2458 T23: -0.2975 REMARK 3 L TENSOR REMARK 3 L11: 4.2069 L22: 10.9812 REMARK 3 L33: 8.4635 L12: -5.5068 REMARK 3 L13: 3.2199 L23: -1.0684 REMARK 3 S TENSOR REMARK 3 S11: 0.5683 S12: 0.6631 S13: -0.6791 REMARK 3 S21: -1.2429 S22: 0.2161 S23: -0.1141 REMARK 3 S31: 1.4143 S32: 1.1153 S33: -0.7844 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 47 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6360 29.8460 38.5470 REMARK 3 T TENSOR REMARK 3 T11: 0.8827 T22: 0.4443 REMARK 3 T33: 0.5990 T12: 0.0948 REMARK 3 T13: -0.0976 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.7125 L22: 10.7212 REMARK 3 L33: 4.4898 L12: -0.0681 REMARK 3 L13: 2.9368 L23: 2.3109 REMARK 3 S TENSOR REMARK 3 S11: -0.4764 S12: -0.2265 S13: 0.6743 REMARK 3 S21: -0.6040 S22: -0.1982 S23: 1.4255 REMARK 3 S31: -0.8864 S32: -0.6720 S33: 0.6746 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 47 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4560 17.7500 37.1960 REMARK 3 T TENSOR REMARK 3 T11: 1.2176 T22: 0.1676 REMARK 3 T33: 0.1741 T12: 0.0274 REMARK 3 T13: -0.0604 T23: -0.1665 REMARK 3 L TENSOR REMARK 3 L11: 9.9270 L22: 5.7081 REMARK 3 L33: 3.3968 L12: -2.0735 REMARK 3 L13: 5.5200 L23: -0.1350 REMARK 3 S TENSOR REMARK 3 S11: 0.4553 S12: 0.3393 S13: -0.5600 REMARK 3 S21: -0.4203 S22: -0.1578 S23: 0.0842 REMARK 3 S31: 0.5718 S32: 0.1407 S33: -0.2975 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 47 REMARK 3 ORIGIN FOR THE GROUP (A): 52.0280 36.9270 14.8810 REMARK 3 T TENSOR REMARK 3 T11: 0.5592 T22: 0.1755 REMARK 3 T33: 0.2536 T12: -0.0140 REMARK 3 T13: -0.0203 T23: 0.1294 REMARK 3 L TENSOR REMARK 3 L11: 4.9351 L22: 13.1175 REMARK 3 L33: 9.9923 L12: 0.9513 REMARK 3 L13: -0.6684 L23: -0.5219 REMARK 3 S TENSOR REMARK 3 S11: -0.2668 S12: -0.0865 S13: 0.2799 REMARK 3 S21: -0.1452 S22: 0.2025 S23: 1.0098 REMARK 3 S31: -0.0296 S32: -0.8172 S33: 0.0643 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3ON0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27538 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 83.789 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43300 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2G7O, C-TERMINAL DOMAIN WITH RESIDUES REMARK 200 MUTATED TO PED208 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 36% MPD, 5% PEG 2000, 100MM CACODYLIC REMARK 280 ACID, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.78250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.78250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.51250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.34350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.51250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.34350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 83.78250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.51250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 77.34350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.78250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.51250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 77.34350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 44630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -420.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 93.02500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 83.78250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 55 REMARK 465 GLU A 56 REMARK 465 GLY A 57 REMARK 465 GLY A 58 REMARK 465 GLU A 127 REMARK 465 MET B 1 REMARK 465 PRO B 120 REMARK 465 ASP B 121 REMARK 465 ASP B 122 REMARK 465 GLU B 123 REMARK 465 ASP B 124 REMARK 465 ASP B 125 REMARK 465 GLN B 126 REMARK 465 GLU B 127 REMARK 465 MET C 1 REMARK 465 PRO C 120 REMARK 465 ASP C 121 REMARK 465 ASP C 122 REMARK 465 GLU C 123 REMARK 465 ASP C 124 REMARK 465 ASP C 125 REMARK 465 GLN C 126 REMARK 465 GLU C 127 REMARK 465 MET D 1 REMARK 465 TYR D 48 REMARK 465 MET D 49 REMARK 465 ILE D 50 REMARK 465 GLN D 51 REMARK 465 GLN D 52 REMARK 465 GLU D 53 REMARK 465 LYS D 54 REMARK 465 ARG D 55 REMARK 465 GLU D 56 REMARK 465 GLY D 57 REMARK 465 GLY D 58 REMARK 465 PRO D 120 REMARK 465 ASP D 121 REMARK 465 ASP D 122 REMARK 465 GLU D 123 REMARK 465 ASP D 124 REMARK 465 ASP D 125 REMARK 465 GLN D 126 REMARK 465 GLU D 127 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY D 27 N GLU D 29 2.17 REMARK 500 O GLY B 27 N GLU B 29 2.18 REMARK 500 O GLY A 27 N GLU A 29 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 97 NH1 ARG A 112 4555 1.92 REMARK 500 NZ LYS A 109 OE1 GLU C 81 4555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 119 C PRO A 120 N 0.252 REMARK 500 DT P 4 O3' DT P 4 C3' -0.047 REMARK 500 DC P 18 O3' DC P 18 C3' -0.061 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 23 NE - CZ - NH1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 23 NE - CZ - NH2 ANGL. DEV. = 6.1 DEGREES REMARK 500 DG P 2 C3' - C2' - C1' ANGL. DEV. = -6.2 DEGREES REMARK 500 DG P 2 O4' - C1' - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 DT P 4 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG P 7 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DA P 9 O4' - C4' - C3' ANGL. DEV. = -3.3 DEGREES REMARK 500 DA P 9 C1' - O4' - C4' ANGL. DEV. = -6.7 DEGREES REMARK 500 DA P 9 O4' - C1' - N9 ANGL. DEV. = -6.7 DEGREES REMARK 500 DT P 10 C3' - O3' - P ANGL. DEV. = 7.2 DEGREES REMARK 500 DA P 13 C1' - O4' - C4' ANGL. DEV. = -6.3 DEGREES REMARK 500 DG P 14 C1' - O4' - C4' ANGL. DEV. = -6.4 DEGREES REMARK 500 DG P 14 C3' - C2' - C1' ANGL. DEV. = -6.9 DEGREES REMARK 500 DG P 14 O4' - C1' - N9 ANGL. DEV. = 6.2 DEGREES REMARK 500 DA P 15 C3' - O3' - P ANGL. DEV. = 7.9 DEGREES REMARK 500 DT P 16 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT P 16 N3 - C4 - O4 ANGL. DEV. = 5.2 DEGREES REMARK 500 DT P 16 C5 - C4 - O4 ANGL. DEV. = -4.9 DEGREES REMARK 500 DT P 17 O4' - C1' - N1 ANGL. DEV. = -7.4 DEGREES REMARK 500 DC P 18 O4' - C1' - N1 ANGL. DEV. = -8.7 DEGREES REMARK 500 DG P 19 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DG P 19 O4' - C1' - C2' ANGL. DEV. = -5.5 DEGREES REMARK 500 DA P 21 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT P 22 C3' - C2' - C1' ANGL. DEV. = -6.2 DEGREES REMARK 500 DC P 23 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DT P 24 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 28 57.72 -57.13 REMARK 500 GLU A 29 -71.89 -17.22 REMARK 500 ASN A 35 -59.82 -23.94 REMARK 500 PHE A 119 47.31 -140.35 REMARK 500 PRO A 120 128.41 -37.17 REMARK 500 ASP A 125 -51.42 94.96 REMARK 500 ILE B 28 56.60 -56.97 REMARK 500 GLU B 29 -72.01 -16.15 REMARK 500 ASN B 35 -59.89 -26.62 REMARK 500 ARG B 55 110.67 160.52 REMARK 500 GLU B 56 7.46 45.31 REMARK 500 PHE B 59 154.20 -38.67 REMARK 500 ILE C 28 56.06 -57.26 REMARK 500 GLU C 29 -71.97 -15.82 REMARK 500 ASN C 35 -56.05 -29.46 REMARK 500 LYS C 54 -76.95 -55.88 REMARK 500 GLU C 56 -128.99 -76.92 REMARK 500 PHE C 59 -119.40 -88.00 REMARK 500 ASN C 60 67.81 144.00 REMARK 500 GLN C 61 -51.46 -28.42 REMARK 500 VAL C 102 -58.40 -122.41 REMARK 500 ILE D 28 57.20 -56.60 REMARK 500 GLU D 29 -72.12 -17.06 REMARK 500 ASN D 60 96.81 163.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PHE A 119 10.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 3ON0 A 1 127 UNP P33788 TRAM8_ECOLX 1 127 DBREF 3ON0 B 1 127 UNP P33788 TRAM8_ECOLX 1 127 DBREF 3ON0 C 1 127 UNP P33788 TRAM8_ECOLX 1 127 DBREF 3ON0 D 1 127 UNP P33788 TRAM8_ECOLX 1 127 DBREF 3ON0 P 1 24 PDB 3ON0 3ON0 1 24 SEQRES 1 A 127 MET PRO LYS ILE GLN THR TYR VAL ASN ASN ASN VAL TYR SEQRES 2 A 127 GLU GLN ILE THR ASP LEU VAL THR ILE ARG LYS GLN GLU SEQRES 3 A 127 GLY ILE GLU GLU ALA SER LEU SER ASN VAL SER SER MET SEQRES 4 A 127 LEU LEU GLU LEU GLY LEU ARG VAL TYR MET ILE GLN GLN SEQRES 5 A 127 GLU LYS ARG GLU GLY GLY PHE ASN GLN MET GLU TYR ASN SEQRES 6 A 127 LYS LEU MET LEU GLU ASN VAL SER ARG VAL ARG ALA MET SEQRES 7 A 127 CYS THR GLU ILE LEU LYS MET SER VAL LEU ASN GLN GLU SEQRES 8 A 127 SER ILE ALA SER GLY ASN PHE ASP TYR ALA VAL ILE LYS SEQRES 9 A 127 PRO ALA ILE ASP LYS PHE ALA ARG GLU GLN VAL SER ILE SEQRES 10 A 127 PHE PHE PRO ASP ASP GLU ASP ASP GLN GLU SEQRES 1 B 127 MET PRO LYS ILE GLN THR TYR VAL ASN ASN ASN VAL TYR SEQRES 2 B 127 GLU GLN ILE THR ASP LEU VAL THR ILE ARG LYS GLN GLU SEQRES 3 B 127 GLY ILE GLU GLU ALA SER LEU SER ASN VAL SER SER MET SEQRES 4 B 127 LEU LEU GLU LEU GLY LEU ARG VAL TYR MET ILE GLN GLN SEQRES 5 B 127 GLU LYS ARG GLU GLY GLY PHE ASN GLN MET GLU TYR ASN SEQRES 6 B 127 LYS LEU MET LEU GLU ASN VAL SER ARG VAL ARG ALA MET SEQRES 7 B 127 CYS THR GLU ILE LEU LYS MET SER VAL LEU ASN GLN GLU SEQRES 8 B 127 SER ILE ALA SER GLY ASN PHE ASP TYR ALA VAL ILE LYS SEQRES 9 B 127 PRO ALA ILE ASP LYS PHE ALA ARG GLU GLN VAL SER ILE SEQRES 10 B 127 PHE PHE PRO ASP ASP GLU ASP ASP GLN GLU SEQRES 1 C 127 MET PRO LYS ILE GLN THR TYR VAL ASN ASN ASN VAL TYR SEQRES 2 C 127 GLU GLN ILE THR ASP LEU VAL THR ILE ARG LYS GLN GLU SEQRES 3 C 127 GLY ILE GLU GLU ALA SER LEU SER ASN VAL SER SER MET SEQRES 4 C 127 LEU LEU GLU LEU GLY LEU ARG VAL TYR MET ILE GLN GLN SEQRES 5 C 127 GLU LYS ARG GLU GLY GLY PHE ASN GLN MET GLU TYR ASN SEQRES 6 C 127 LYS LEU MET LEU GLU ASN VAL SER ARG VAL ARG ALA MET SEQRES 7 C 127 CYS THR GLU ILE LEU LYS MET SER VAL LEU ASN GLN GLU SEQRES 8 C 127 SER ILE ALA SER GLY ASN PHE ASP TYR ALA VAL ILE LYS SEQRES 9 C 127 PRO ALA ILE ASP LYS PHE ALA ARG GLU GLN VAL SER ILE SEQRES 10 C 127 PHE PHE PRO ASP ASP GLU ASP ASP GLN GLU SEQRES 1 D 127 MET PRO LYS ILE GLN THR TYR VAL ASN ASN ASN VAL TYR SEQRES 2 D 127 GLU GLN ILE THR ASP LEU VAL THR ILE ARG LYS GLN GLU SEQRES 3 D 127 GLY ILE GLU GLU ALA SER LEU SER ASN VAL SER SER MET SEQRES 4 D 127 LEU LEU GLU LEU GLY LEU ARG VAL TYR MET ILE GLN GLN SEQRES 5 D 127 GLU LYS ARG GLU GLY GLY PHE ASN GLN MET GLU TYR ASN SEQRES 6 D 127 LYS LEU MET LEU GLU ASN VAL SER ARG VAL ARG ALA MET SEQRES 7 D 127 CYS THR GLU ILE LEU LYS MET SER VAL LEU ASN GLN GLU SEQRES 8 D 127 SER ILE ALA SER GLY ASN PHE ASP TYR ALA VAL ILE LYS SEQRES 9 D 127 PRO ALA ILE ASP LYS PHE ALA ARG GLU GLN VAL SER ILE SEQRES 10 D 127 PHE PHE PRO ASP ASP GLU ASP ASP GLN GLU SEQRES 1 P 24 DA DG DA DT DT DC DG DA DA DT DC DT DA SEQRES 2 P 24 DG DA DT DT DC DG DA DA DT DC DT HELIX 1 1 ASN A 9 GLN A 25 1 17 HELIX 2 2 SER A 32 GLU A 53 1 22 HELIX 3 3 ASN A 60 ASN A 89 1 30 HELIX 4 4 ASN A 89 GLY A 96 1 8 HELIX 5 5 ASP A 99 PHE A 119 1 21 HELIX 6 6 PRO A 120 ASP A 124 5 5 HELIX 7 7 ASN B 9 GLN B 25 1 17 HELIX 8 8 SER B 32 ARG B 55 1 24 HELIX 9 9 ASN B 60 ASN B 89 1 30 HELIX 10 10 ASN B 89 GLY B 96 1 8 HELIX 11 11 ASP B 99 PHE B 119 1 21 HELIX 12 12 ASN C 9 GLN C 25 1 17 HELIX 13 13 SER C 32 GLU C 56 1 25 HELIX 14 14 ASN C 60 ASN C 89 1 30 HELIX 15 15 ASN C 89 GLY C 96 1 8 HELIX 16 16 ASP C 99 PHE C 119 1 21 HELIX 17 17 ASN D 9 GLN D 25 1 17 HELIX 18 18 SER D 32 VAL D 47 1 16 HELIX 19 19 ASN D 60 ASN D 89 1 30 HELIX 20 20 ASN D 89 GLY D 96 1 8 HELIX 21 21 ASP D 99 PHE D 119 1 21 SHEET 1 A 2 LYS A 3 TYR A 7 0 SHEET 2 A 2 LYS D 3 TYR D 7 -1 O ILE D 4 N THR A 6 SHEET 1 B 2 LYS B 3 TYR B 7 0 SHEET 2 B 2 LYS C 3 TYR C 7 -1 O THR C 6 N ILE B 4 CISPEP 1 GLY C 58 PHE C 59 0 5.69 CRYST1 93.025 154.687 167.565 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010750 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005968 0.00000