HEADER TRANSPORT PROTEIN 01-SEP-10 3OPO TITLE CRYSTAL STRUCTURE OF THE MEMBRANE FUSION PROTEIN CUSB FROM ESCHERICHIA TITLE 2 COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATION EFFLUX SYSTEM PROTEIN CUSB; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MEMBRANE FUSION PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: CUSB, YLCD, B0574, JW0563; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA BARREL, COPPER TRANSPORT, ION TRANSPORT, TRANSPORT, TRANSPORT KEYWDS 2 PROTEIN, CUSA, CUSC EXPDTA X-RAY DIFFRACTION AUTHOR C.-C.SU REVDAT 2 21-FEB-24 3OPO 1 REMARK SEQADV LINK REVDAT 1 27-APR-11 3OPO 0 JRNL AUTH C.C.SU,F.YANG,F.LONG,D.REYON,M.D.ROUTH,D.W.KUO,A.K.MOKHTARI, JRNL AUTH 2 J.D.VAN ORNAM,K.L.RABE,J.A.HOY,Y.J.LEE,K.R.RAJASHANKAR, JRNL AUTH 3 E.W.YU JRNL TITL CRYSTAL STRUCTURE OF THE MEMBRANE FUSION PROTEIN CUSB FROM JRNL TITL 2 ESCHERICHIA COLI. JRNL REF J.MOL.BIOL. V. 393 342 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19695261 JRNL DOI 10.1016/J.JMB.2009.08.029 REMARK 2 REMARK 2 RESOLUTION. 3.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 11252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.297 REMARK 3 R VALUE (WORKING SET) : 0.295 REMARK 3 FREE R VALUE : 0.340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 541 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3119 - 6.1034 0.99 3026 153 0.2905 0.3232 REMARK 3 2 6.1034 - 4.8473 0.96 2836 140 0.2913 0.3571 REMARK 3 3 4.8473 - 4.2354 0.92 2644 130 0.2727 0.3471 REMARK 3 4 4.2354 - 3.8485 0.76 2205 118 0.3675 0.3870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 1.17 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 295.1 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.810 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -24.59120 REMARK 3 B22 (A**2) : 91.32050 REMARK 3 B33 (A**2) : -66.72920 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4619 REMARK 3 ANGLE : 0.962 6294 REMARK 3 CHIRALITY : 0.063 760 REMARK 3 PLANARITY : 0.004 807 REMARK 3 DIHEDRAL : 16.407 1704 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OPO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3779 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(111) SIDE BOUNCE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12345 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.840 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG1000 15%, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.40150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.33900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 129.58300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.40150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.33900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 129.58300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.40150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.33900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 129.58300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.40150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.33900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 129.58300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 ILE A 4 REMARK 465 ALA A 5 REMARK 465 LEU A 6 REMARK 465 ILE A 7 REMARK 465 ILE A 8 REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 MET A 11 REMARK 465 ILE A 12 REMARK 465 ALA A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 ILE A 16 REMARK 465 ILE A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 GLY A 21 REMARK 465 PHE A 22 REMARK 465 THR A 23 REMARK 465 TRP A 24 REMARK 465 VAL A 25 REMARK 465 ALA A 26 REMARK 465 LYS A 27 REMARK 465 ALA A 28 REMARK 465 GLU A 29 REMARK 465 PRO A 30 REMARK 465 PRO A 31 REMARK 465 ALA A 32 REMARK 465 GLU A 33 REMARK 465 LYS A 34 REMARK 465 THR A 35 REMARK 465 SER A 36 REMARK 465 THR A 37 REMARK 465 ALA A 38 REMARK 465 GLU A 39 REMARK 465 ARG A 40 REMARK 465 LYS A 41 REMARK 465 ILE A 42 REMARK 465 LEU A 43 REMARK 465 PHE A 44 REMARK 465 TRP A 45 REMARK 465 TYR A 46 REMARK 465 ASP A 47 REMARK 465 PRO A 48 REMARK 465 MET A 49 REMARK 465 TYR A 50 REMARK 465 PRO A 51 REMARK 465 ASN A 52 REMARK 465 THR A 53 REMARK 465 ARG A 54 REMARK 465 PHE A 55 REMARK 465 ASP A 56 REMARK 465 LYS A 57 REMARK 465 PRO A 58 REMARK 465 GLY A 59 REMARK 465 LYS A 60 REMARK 465 SER A 61 REMARK 465 PRO A 62 REMARK 465 PHE A 63 REMARK 465 MET A 64 REMARK 465 ASP A 65 REMARK 465 MET A 66 REMARK 465 ASP A 67 REMARK 465 LEU A 68 REMARK 465 VAL A 69 REMARK 465 PRO A 70 REMARK 465 LYS A 71 REMARK 465 TYR A 72 REMARK 465 ALA A 73 REMARK 465 ASP A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 SER A 77 REMARK 465 SER A 78 REMARK 465 ALA A 79 REMARK 465 SER A 80 REMARK 465 GLY A 81 REMARK 465 VAL A 82 REMARK 465 ARG A 83 REMARK 465 ILE A 84 REMARK 465 ASP A 85 REMARK 465 PRO A 86 REMARK 465 THR A 87 REMARK 465 GLN A 88 REMARK 465 THR A 89 REMARK 465 ASP A 386 REMARK 465 SER A 387 REMARK 465 GLU A 388 REMARK 465 ALA A 389 REMARK 465 ASN A 390 REMARK 465 ILE A 391 REMARK 465 SER A 392 REMARK 465 GLY A 393 REMARK 465 ALA A 394 REMARK 465 LEU A 395 REMARK 465 GLU A 396 REMARK 465 ARG A 397 REMARK 465 MET A 398 REMARK 465 ARG A 399 REMARK 465 SER A 400 REMARK 465 GLU A 401 REMARK 465 SER A 402 REMARK 465 ALA A 403 REMARK 465 THR A 404 REMARK 465 HIS A 405 REMARK 465 ALA A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 465 HIS A 411 REMARK 465 HIS A 412 REMARK 465 HIS A 413 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 ILE B 4 REMARK 465 ALA B 5 REMARK 465 LEU B 6 REMARK 465 ILE B 7 REMARK 465 ILE B 8 REMARK 465 GLY B 9 REMARK 465 SER B 10 REMARK 465 MET B 11 REMARK 465 ILE B 12 REMARK 465 ALA B 13 REMARK 465 GLY B 14 REMARK 465 GLY B 15 REMARK 465 ILE B 16 REMARK 465 ILE B 17 REMARK 465 SER B 18 REMARK 465 ALA B 19 REMARK 465 ALA B 20 REMARK 465 GLY B 21 REMARK 465 PHE B 22 REMARK 465 THR B 23 REMARK 465 TRP B 24 REMARK 465 VAL B 25 REMARK 465 ALA B 26 REMARK 465 LYS B 27 REMARK 465 ALA B 28 REMARK 465 GLU B 29 REMARK 465 PRO B 30 REMARK 465 PRO B 31 REMARK 465 ALA B 32 REMARK 465 GLU B 33 REMARK 465 LYS B 34 REMARK 465 THR B 35 REMARK 465 SER B 36 REMARK 465 THR B 37 REMARK 465 ALA B 38 REMARK 465 GLU B 39 REMARK 465 ARG B 40 REMARK 465 LYS B 41 REMARK 465 ILE B 42 REMARK 465 LEU B 43 REMARK 465 PHE B 44 REMARK 465 TRP B 45 REMARK 465 TYR B 46 REMARK 465 ASP B 47 REMARK 465 PRO B 48 REMARK 465 MET B 49 REMARK 465 TYR B 50 REMARK 465 PRO B 51 REMARK 465 ASN B 52 REMARK 465 THR B 53 REMARK 465 ARG B 54 REMARK 465 PHE B 55 REMARK 465 ASP B 56 REMARK 465 LYS B 57 REMARK 465 PRO B 58 REMARK 465 GLY B 59 REMARK 465 LYS B 60 REMARK 465 SER B 61 REMARK 465 PRO B 62 REMARK 465 PHE B 63 REMARK 465 MET B 64 REMARK 465 ASP B 65 REMARK 465 MET B 66 REMARK 465 ASP B 67 REMARK 465 LEU B 68 REMARK 465 VAL B 69 REMARK 465 PRO B 70 REMARK 465 LYS B 71 REMARK 465 TYR B 72 REMARK 465 ALA B 73 REMARK 465 ASP B 74 REMARK 465 GLU B 75 REMARK 465 GLU B 76 REMARK 465 SER B 77 REMARK 465 SER B 78 REMARK 465 ALA B 79 REMARK 465 SER B 80 REMARK 465 GLY B 81 REMARK 465 VAL B 82 REMARK 465 ARG B 83 REMARK 465 ILE B 84 REMARK 465 ASP B 85 REMARK 465 PRO B 86 REMARK 465 THR B 87 REMARK 465 GLN B 88 REMARK 465 ASP B 386 REMARK 465 SER B 387 REMARK 465 GLU B 388 REMARK 465 ALA B 389 REMARK 465 ASN B 390 REMARK 465 ILE B 391 REMARK 465 SER B 392 REMARK 465 GLY B 393 REMARK 465 ALA B 394 REMARK 465 LEU B 395 REMARK 465 GLU B 396 REMARK 465 ARG B 397 REMARK 465 MET B 398 REMARK 465 ARG B 399 REMARK 465 SER B 400 REMARK 465 GLU B 401 REMARK 465 SER B 402 REMARK 465 ALA B 403 REMARK 465 THR B 404 REMARK 465 HIS B 405 REMARK 465 ALA B 406 REMARK 465 HIS B 407 REMARK 465 HIS B 408 REMARK 465 HIS B 409 REMARK 465 HIS B 410 REMARK 465 HIS B 411 REMARK 465 HIS B 412 REMARK 465 HIS B 413 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 92 24.19 -153.02 REMARK 500 GLN A 108 113.43 174.00 REMARK 500 GLU A 118 34.77 -71.68 REMARK 500 GLN A 120 48.74 -90.24 REMARK 500 ALA A 129 155.01 -43.62 REMARK 500 LYS A 134 -134.55 53.25 REMARK 500 VAL A 135 101.28 103.74 REMARK 500 PRO A 137 67.50 -67.51 REMARK 500 ASP A 142 -163.12 -124.14 REMARK 500 LYS A 146 -120.47 161.80 REMARK 500 LEU A 151 145.17 178.86 REMARK 500 PRO A 156 -127.50 -66.46 REMARK 500 ASP A 157 -66.59 16.39 REMARK 500 TRP A 158 -59.77 -25.27 REMARK 500 ARG A 169 4.37 -67.19 REMARK 500 GLU A 170 -50.75 -123.64 REMARK 500 THR A 171 35.66 -83.01 REMARK 500 THR A 174 139.59 -37.76 REMARK 500 ARG A 184 0.41 -69.40 REMARK 500 GLN A 202 -40.62 72.18 REMARK 500 ILE A 204 152.76 -37.14 REMARK 500 THR A 206 -116.44 -63.47 REMARK 500 PRO A 213 -70.77 -61.86 REMARK 500 ALA A 220 145.99 60.90 REMARK 500 PHE A 221 122.71 107.53 REMARK 500 ASP A 222 -13.74 -173.52 REMARK 500 ALA A 225 -105.31 70.49 REMARK 500 LYS A 231 -137.61 32.79 REMARK 500 ASP A 232 13.50 -65.60 REMARK 500 VAL A 235 -30.56 -131.61 REMARK 500 LYS A 259 24.37 -150.59 REMARK 500 PRO A 272 -72.90 -62.55 REMARK 500 ASP A 273 -158.92 44.64 REMARK 500 LYS A 274 -108.04 -69.54 REMARK 500 THR A 277 160.17 -48.84 REMARK 500 ARG A 279 -92.21 -51.17 REMARK 500 PRO A 285 20.52 -61.44 REMARK 500 ASP A 288 98.47 -45.37 REMARK 500 ALA A 290 -92.45 -56.13 REMARK 500 ARG A 292 83.72 -48.96 REMARK 500 ASP A 301 94.41 -66.48 REMARK 500 ALA A 320 -167.44 -127.94 REMARK 500 ASP A 334 -165.36 -168.05 REMARK 500 THR A 335 -11.63 -179.68 REMARK 500 ARG A 340 172.03 169.15 REMARK 500 VAL A 341 -145.94 -152.97 REMARK 500 ALA A 346 -25.20 -33.26 REMARK 500 ASP A 347 14.24 -62.73 REMARK 500 SER A 361 124.86 179.90 REMARK 500 LEU A 382 111.99 171.22 REMARK 500 REMARK 500 THIS ENTRY HAS 97 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AG B 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AG A 414 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OOC RELATED DB: PDB REMARK 900 RELATED ID: 3OW7 RELATED DB: PDB DBREF 3OPO A 1 407 UNP P77239 CUSB_ECOLI 1 407 DBREF 3OPO B 1 407 UNP P77239 CUSB_ECOLI 1 407 SEQADV 3OPO HIS A 408 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS A 409 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS A 410 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS A 411 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS A 412 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS A 413 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 408 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 409 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 410 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 411 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 412 UNP P77239 EXPRESSION TAG SEQADV 3OPO HIS B 413 UNP P77239 EXPRESSION TAG SEQRES 1 A 413 MET LYS LYS ILE ALA LEU ILE ILE GLY SER MET ILE ALA SEQRES 2 A 413 GLY GLY ILE ILE SER ALA ALA GLY PHE THR TRP VAL ALA SEQRES 3 A 413 LYS ALA GLU PRO PRO ALA GLU LYS THR SER THR ALA GLU SEQRES 4 A 413 ARG LYS ILE LEU PHE TRP TYR ASP PRO MET TYR PRO ASN SEQRES 5 A 413 THR ARG PHE ASP LYS PRO GLY LYS SER PRO PHE MET ASP SEQRES 6 A 413 MET ASP LEU VAL PRO LYS TYR ALA ASP GLU GLU SER SER SEQRES 7 A 413 ALA SER GLY VAL ARG ILE ASP PRO THR GLN THR GLN ASN SEQRES 8 A 413 LEU GLY VAL LYS THR ALA THR VAL THR ARG GLY PRO LEU SEQRES 9 A 413 THR PHE ALA GLN SER PHE PRO ALA ASN VAL SER TYR ASN SEQRES 10 A 413 GLU TYR GLN TYR ALA ILE VAL GLN ALA ARG ALA ALA GLY SEQRES 11 A 413 PHE ILE ASP LYS VAL TYR PRO LEU THR VAL GLY ASP LYS SEQRES 12 A 413 VAL GLN LYS GLY THR PRO LEU LEU ASP LEU THR ILE PRO SEQRES 13 A 413 ASP TRP VAL GLU ALA GLN SER GLU TYR LEU LEU LEU ARG SEQRES 14 A 413 GLU THR GLY GLY THR ALA THR GLN THR GLU GLY ILE LEU SEQRES 15 A 413 GLU ARG LEU ARG LEU ALA GLY MET PRO GLU ALA ASP ILE SEQRES 16 A 413 ARG ARG LEU ILE ALA THR GLN LYS ILE GLN THR ARG PHE SEQRES 17 A 413 THR LEU LYS ALA PRO ILE ASP GLY VAL ILE THR ALA PHE SEQRES 18 A 413 ASP LEU ARG ALA GLY MET ASN ILE ALA LYS ASP ASN VAL SEQRES 19 A 413 VAL ALA LYS ILE GLN GLY MET ASP PRO VAL TRP VAL THR SEQRES 20 A 413 ALA ALA ILE PRO GLU SER ILE ALA TRP LEU VAL LYS ASP SEQRES 21 A 413 ALA SER GLN PHE THR LEU THR VAL PRO ALA ARG PRO ASP SEQRES 22 A 413 LYS THR LEU THR ILE ARG LYS TRP THR LEU LEU PRO GLY SEQRES 23 A 413 VAL ASP ALA ALA THR ARG THR LEU GLN LEU ARG LEU GLU SEQRES 24 A 413 VAL ASP ASN ALA ASP GLU ALA LEU LYS PRO GLY MET ASN SEQRES 25 A 413 ALA TRP LEU GLN LEU ASN THR ALA SER GLU PRO MET LEU SEQRES 26 A 413 LEU ILE PRO SER GLN ALA LEU ILE ASP THR GLY SER GLU SEQRES 27 A 413 GLN ARG VAL ILE THR VAL ASP ALA ASP GLY ARG PHE VAL SEQRES 28 A 413 PRO LYS ARG VAL ALA VAL PHE GLN ALA SER GLN GLY VAL SEQRES 29 A 413 THR ALA LEU ARG SER GLY LEU ALA GLU GLY GLU LYS VAL SEQRES 30 A 413 VAL SER SER GLY LEU PHE LEU ILE ASP SER GLU ALA ASN SEQRES 31 A 413 ILE SER GLY ALA LEU GLU ARG MET ARG SER GLU SER ALA SEQRES 32 A 413 THR HIS ALA HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 413 MET LYS LYS ILE ALA LEU ILE ILE GLY SER MET ILE ALA SEQRES 2 B 413 GLY GLY ILE ILE SER ALA ALA GLY PHE THR TRP VAL ALA SEQRES 3 B 413 LYS ALA GLU PRO PRO ALA GLU LYS THR SER THR ALA GLU SEQRES 4 B 413 ARG LYS ILE LEU PHE TRP TYR ASP PRO MET TYR PRO ASN SEQRES 5 B 413 THR ARG PHE ASP LYS PRO GLY LYS SER PRO PHE MET ASP SEQRES 6 B 413 MET ASP LEU VAL PRO LYS TYR ALA ASP GLU GLU SER SER SEQRES 7 B 413 ALA SER GLY VAL ARG ILE ASP PRO THR GLN THR GLN ASN SEQRES 8 B 413 LEU GLY VAL LYS THR ALA THR VAL THR ARG GLY PRO LEU SEQRES 9 B 413 THR PHE ALA GLN SER PHE PRO ALA ASN VAL SER TYR ASN SEQRES 10 B 413 GLU TYR GLN TYR ALA ILE VAL GLN ALA ARG ALA ALA GLY SEQRES 11 B 413 PHE ILE ASP LYS VAL TYR PRO LEU THR VAL GLY ASP LYS SEQRES 12 B 413 VAL GLN LYS GLY THR PRO LEU LEU ASP LEU THR ILE PRO SEQRES 13 B 413 ASP TRP VAL GLU ALA GLN SER GLU TYR LEU LEU LEU ARG SEQRES 14 B 413 GLU THR GLY GLY THR ALA THR GLN THR GLU GLY ILE LEU SEQRES 15 B 413 GLU ARG LEU ARG LEU ALA GLY MET PRO GLU ALA ASP ILE SEQRES 16 B 413 ARG ARG LEU ILE ALA THR GLN LYS ILE GLN THR ARG PHE SEQRES 17 B 413 THR LEU LYS ALA PRO ILE ASP GLY VAL ILE THR ALA PHE SEQRES 18 B 413 ASP LEU ARG ALA GLY MET ASN ILE ALA LYS ASP ASN VAL SEQRES 19 B 413 VAL ALA LYS ILE GLN GLY MET ASP PRO VAL TRP VAL THR SEQRES 20 B 413 ALA ALA ILE PRO GLU SER ILE ALA TRP LEU VAL LYS ASP SEQRES 21 B 413 ALA SER GLN PHE THR LEU THR VAL PRO ALA ARG PRO ASP SEQRES 22 B 413 LYS THR LEU THR ILE ARG LYS TRP THR LEU LEU PRO GLY SEQRES 23 B 413 VAL ASP ALA ALA THR ARG THR LEU GLN LEU ARG LEU GLU SEQRES 24 B 413 VAL ASP ASN ALA ASP GLU ALA LEU LYS PRO GLY MET ASN SEQRES 25 B 413 ALA TRP LEU GLN LEU ASN THR ALA SER GLU PRO MET LEU SEQRES 26 B 413 LEU ILE PRO SER GLN ALA LEU ILE ASP THR GLY SER GLU SEQRES 27 B 413 GLN ARG VAL ILE THR VAL ASP ALA ASP GLY ARG PHE VAL SEQRES 28 B 413 PRO LYS ARG VAL ALA VAL PHE GLN ALA SER GLN GLY VAL SEQRES 29 B 413 THR ALA LEU ARG SER GLY LEU ALA GLU GLY GLU LYS VAL SEQRES 30 B 413 VAL SER SER GLY LEU PHE LEU ILE ASP SER GLU ALA ASN SEQRES 31 B 413 ILE SER GLY ALA LEU GLU ARG MET ARG SER GLU SER ALA SEQRES 32 B 413 THR HIS ALA HIS HIS HIS HIS HIS HIS HIS HET AG A 414 1 HET AG B 414 1 HETNAM AG SILVER ION FORMUL 3 AG 2(AG 1+) HELIX 1 1 ASP A 157 ARG A 169 1 13 HELIX 2 2 THR A 174 GLY A 189 1 16 HELIX 3 3 PRO A 191 GLN A 202 1 12 HELIX 4 4 SER A 253 ALA A 255 5 3 HELIX 5 5 ASP A 260 PHE A 264 5 5 HELIX 6 6 ASP B 157 LEU B 168 1 12 HELIX 7 7 THR B 174 GLY B 189 1 16 HELIX 8 8 PRO B 191 THR B 201 1 11 HELIX 9 9 GLU B 252 TRP B 256 1 5 HELIX 10 10 ASP B 260 PHE B 264 5 5 SHEET 1 A 2 THR A 96 THR A 98 0 SHEET 2 A 2 LYS A 376 VAL A 378 -1 O VAL A 377 N ALA A 97 SHEET 1 B 4 THR A 100 GLY A 102 0 SHEET 2 B 4 MET A 324 PRO A 328 -1 O LEU A 326 N THR A 100 SHEET 3 B 4 VAL A 364 SER A 369 -1 O THR A 365 N ILE A 327 SHEET 4 B 4 ALA A 356 SER A 361 -1 N ALA A 356 O SER A 369 SHEET 1 C 2 THR A 105 PHE A 106 0 SHEET 2 C 2 THR A 319 ALA A 320 -1 O THR A 319 N PHE A 106 SHEET 1 D 3 SER A 109 ALA A 112 0 SHEET 2 D 3 ALA A 313 GLN A 316 -1 O LEU A 315 N PHE A 110 SHEET 3 D 3 LEU A 266 THR A 267 -1 N THR A 267 O TRP A 314 SHEET 1 E 4 VAL A 114 SER A 115 0 SHEET 2 E 4 PRO A 243 PRO A 251 -1 O TRP A 245 N SER A 115 SHEET 3 E 4 THR A 293 ASP A 301 -1 O LEU A 294 N ILE A 250 SHEET 4 E 4 ILE A 278 TRP A 281 -1 N LYS A 280 O GLU A 299 SHEET 1 F 4 VAL A 114 SER A 115 0 SHEET 2 F 4 PRO A 243 PRO A 251 -1 O TRP A 245 N SER A 115 SHEET 3 F 4 THR A 293 ASP A 301 -1 O LEU A 294 N ILE A 250 SHEET 4 F 4 LEU A 284 ASP A 288 -1 N ASP A 288 O THR A 293 SHEET 1 G 4 TYR A 121 GLN A 125 0 SHEET 2 G 4 VAL A 234 GLN A 239 -1 O ILE A 238 N ALA A 122 SHEET 3 G 4 GLY A 216 THR A 219 -1 N THR A 219 O LYS A 237 SHEET 4 G 4 LYS A 143 VAL A 144 -1 N VAL A 144 O GLY A 216 SHEET 1 H 3 PHE A 131 ASP A 133 0 SHEET 2 H 3 PRO A 149 THR A 154 -1 O THR A 154 N PHE A 131 SHEET 3 H 3 LEU A 210 LYS A 211 -1 O LEU A 210 N LEU A 151 SHEET 1 I 3 LEU A 332 ASP A 334 0 SHEET 2 I 3 GLN A 339 ASP A 345 -1 O ARG A 340 N ILE A 333 SHEET 3 I 3 ARG A 349 ARG A 354 -1 O VAL A 351 N THR A 343 SHEET 1 J 2 THR B 96 THR B 98 0 SHEET 2 J 2 LYS B 376 VAL B 378 -1 O VAL B 377 N ALA B 97 SHEET 1 K 4 THR B 100 GLY B 102 0 SHEET 2 K 4 MET B 324 PRO B 328 -1 O MET B 324 N GLY B 102 SHEET 3 K 4 VAL B 364 SER B 369 -1 O THR B 365 N ILE B 327 SHEET 4 K 4 ALA B 356 SER B 361 -1 N ALA B 356 O SER B 369 SHEET 1 L 6 THR B 265 THR B 267 0 SHEET 2 L 6 ALA B 313 ASN B 318 -1 O TRP B 314 N THR B 267 SHEET 3 L 6 ALA B 107 SER B 115 -1 N GLN B 108 O LEU B 317 SHEET 4 L 6 PRO B 243 ALA B 248 -1 O TRP B 245 N SER B 115 SHEET 5 L 6 ARG B 297 ASP B 301 -1 O VAL B 300 N VAL B 244 SHEET 6 L 6 TRP B 281 THR B 282 -1 N THR B 282 O ARG B 297 SHEET 1 M 4 TYR B 121 GLN B 125 0 SHEET 2 M 4 VAL B 234 GLN B 239 -1 O ILE B 238 N ALA B 122 SHEET 3 M 4 GLY B 216 THR B 219 -1 N VAL B 217 O GLN B 239 SHEET 4 M 4 LYS B 143 VAL B 144 -1 N VAL B 144 O GLY B 216 SHEET 1 N 3 PHE B 131 ASP B 133 0 SHEET 2 N 3 PRO B 149 THR B 154 -1 O THR B 154 N PHE B 131 SHEET 3 N 3 PHE B 208 LYS B 211 -1 O LEU B 210 N LEU B 151 SHEET 1 O 2 ILE B 250 PRO B 251 0 SHEET 2 O 2 THR B 293 LEU B 294 -1 O LEU B 294 N ILE B 250 SHEET 1 P 3 ILE B 333 ASP B 334 0 SHEET 2 P 3 GLN B 339 ASP B 345 -1 O ARG B 340 N ILE B 333 SHEET 3 P 3 ARG B 349 ARG B 354 -1 O VAL B 351 N THR B 343 LINK SD MET A 324 AG AG A 414 1555 1555 2.63 LINK SD MET B 324 AG AG B 414 1555 1555 2.44 SITE 1 AC1 3 MET B 324 PHE B 358 ARG B 368 SITE 1 AC2 3 GLU A 322 MET A 324 ARG A 368 CRYST1 84.803 114.678 259.166 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011792 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008720 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003859 0.00000