data_3OR3 # _entry.id 3OR3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OR3 pdb_00003or3 10.2210/pdb3or3/pdb NDB NA0728 ? ? RCSB RCSB061467 ? ? WWPDB D_1000061467 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3OQG 'RESTRICTION ENDONUCLEASE Hpy188I IN COMPLEX WITH SUBSTRATE DNA' unspecified PDB 3MX1 'The structure of GIY-YIG endonuclease R.Eco29kI' unspecified PDB 3MX4 'DNA binding and cleavage by the GIY-YIG endonuclease R.Eco29KI inactive variant E142Q' unspecified PDB 3NIC 'DNA binding and cleavage by the GIY-YIG endonuclease R.Eco29kI inactive variant Y49F' unspecified PDB 2WSH 'STRUCTURE OF BACTERIOPHAGE T4 ENDOII E118A MUTANT' unspecified PDB 1MK0 'CATALYTIC DOMAIN OF INTRON ENDONUCLEASE I-TEVI, E75A MUTANT' unspecified PDB 1YD1 ;CRYSTAL STRUCTURE OF THE GIY-YIG N-TERMINAL ENDONUCLEASE DOMAIN OF UVRC FROM THERMOTOGA MARITIMA BOUND TO ITS CATALYTIC DIVALENT CATION: MAGNESIUM ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OR3 _pdbx_database_status.recvd_initial_deposition_date 2010-09-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sokolowska, M.' 1 'Czapinska, H.' 2 'Bochtler, M.' 3 # _citation.id primary _citation.title 'Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first 1554 _citation.page_last 1564 _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20935048 _citation.pdbx_database_id_DOI 10.1093/nar/gkq821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sokolowska, M.' 1 ? primary 'Czapinska, H.' 2 ? primary 'Bochtler, M.' 3 ? # _cell.entry_id 3OR3 _cell.length_a 65.395 _cell.length_b 65.395 _cell.length_c 221.783 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OR3 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RESTRICTION ENDONUCLEASE HPY188I' 21130.070 2 ? ? ? ? 2 polymer syn "5'-D(*GP*AP*TP*CP*T)-3'" 1495.023 1 ? ? ? ? 3 polymer syn "5'-D(*GP*TP*TP*CP*A)-3'" 1495.023 1 ? ? ? ? 4 polymer syn "5'-D(P*GP*AP*AP*C)-3'" 1199.844 1 ? ? ? ? 5 polymer syn "5'-D(P*GP*AP*TP*C)-3'" 1190.830 1 ? ? ? ? 6 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 7 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 8 water nat water 18.015 311 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;MGHHHHHHEFMAKRKSDIILKSVDDLKDEIDYKDFEYKEYFNLLCELVPNNSLEKLEINAIDEKN(MSE)KNEGLVYVFV IQGKIFKIGHSITPITKRVQSYNCGKVEYRKNGTCSTTNYFVLQSLLKINKIVQVYAFFPEQPTYTLFGKTYQDSFSTSK RAENVILENFIKNHNKKPIGCTQT ; ;MGHHHHHHEFMAKRKSDIILKSVDDLKDEIDYKDFEYKEYFNLLCELVPNNSLEKLEINAIDEKNMKNEGLVYVFVIQGK IFKIGHSITPITKRVQSYNCGKVEYRKNGTCSTTNYFVLQSLLKINKIVQVYAFFPEQPTYTLFGKTYQDSFSTSKRAEN VILENFIKNHNKKPIGCTQT ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DC)(DT)' GATCT C ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DT)(DC)(DA)' GTTCA D ? 4 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DC)' GAAC E ? 5 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DC)' GATC F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 GLU n 1 10 PHE n 1 11 MET n 1 12 ALA n 1 13 LYS n 1 14 ARG n 1 15 LYS n 1 16 SER n 1 17 ASP n 1 18 ILE n 1 19 ILE n 1 20 LEU n 1 21 LYS n 1 22 SER n 1 23 VAL n 1 24 ASP n 1 25 ASP n 1 26 LEU n 1 27 LYS n 1 28 ASP n 1 29 GLU n 1 30 ILE n 1 31 ASP n 1 32 TYR n 1 33 LYS n 1 34 ASP n 1 35 PHE n 1 36 GLU n 1 37 TYR n 1 38 LYS n 1 39 GLU n 1 40 TYR n 1 41 PHE n 1 42 ASN n 1 43 LEU n 1 44 LEU n 1 45 CYS n 1 46 GLU n 1 47 LEU n 1 48 VAL n 1 49 PRO n 1 50 ASN n 1 51 ASN n 1 52 SER n 1 53 LEU n 1 54 GLU n 1 55 LYS n 1 56 LEU n 1 57 GLU n 1 58 ILE n 1 59 ASN n 1 60 ALA n 1 61 ILE n 1 62 ASP n 1 63 GLU n 1 64 LYS n 1 65 ASN n 1 66 MSE n 1 67 LYS n 1 68 ASN n 1 69 GLU n 1 70 GLY n 1 71 LEU n 1 72 VAL n 1 73 TYR n 1 74 VAL n 1 75 PHE n 1 76 VAL n 1 77 ILE n 1 78 GLN n 1 79 GLY n 1 80 LYS n 1 81 ILE n 1 82 PHE n 1 83 LYS n 1 84 ILE n 1 85 GLY n 1 86 HIS n 1 87 SER n 1 88 ILE n 1 89 THR n 1 90 PRO n 1 91 ILE n 1 92 THR n 1 93 LYS n 1 94 ARG n 1 95 VAL n 1 96 GLN n 1 97 SER n 1 98 TYR n 1 99 ASN n 1 100 CYS n 1 101 GLY n 1 102 LYS n 1 103 VAL n 1 104 GLU n 1 105 TYR n 1 106 ARG n 1 107 LYS n 1 108 ASN n 1 109 GLY n 1 110 THR n 1 111 CYS n 1 112 SER n 1 113 THR n 1 114 THR n 1 115 ASN n 1 116 TYR n 1 117 PHE n 1 118 VAL n 1 119 LEU n 1 120 GLN n 1 121 SER n 1 122 LEU n 1 123 LEU n 1 124 LYS n 1 125 ILE n 1 126 ASN n 1 127 LYS n 1 128 ILE n 1 129 VAL n 1 130 GLN n 1 131 VAL n 1 132 TYR n 1 133 ALA n 1 134 PHE n 1 135 PHE n 1 136 PRO n 1 137 GLU n 1 138 GLN n 1 139 PRO n 1 140 THR n 1 141 TYR n 1 142 THR n 1 143 LEU n 1 144 PHE n 1 145 GLY n 1 146 LYS n 1 147 THR n 1 148 TYR n 1 149 GLN n 1 150 ASP n 1 151 SER n 1 152 PHE n 1 153 SER n 1 154 THR n 1 155 SER n 1 156 LYS n 1 157 ARG n 1 158 ALA n 1 159 GLU n 1 160 ASN n 1 161 VAL n 1 162 ILE n 1 163 LEU n 1 164 GLU n 1 165 ASN n 1 166 PHE n 1 167 ILE n 1 168 LYS n 1 169 ASN n 1 170 HIS n 1 171 ASN n 1 172 LYS n 1 173 LYS n 1 174 PRO n 1 175 ILE n 1 176 GLY n 1 177 CYS n 1 178 THR n 1 179 GLN n 1 180 THR n 2 1 DG n 2 2 DA n 2 3 DT n 2 4 DC n 2 5 DT n 3 1 DG n 3 2 DT n 3 3 DT n 3 4 DC n 3 5 DA n 4 1 DG n 4 2 DA n 4 3 DA n 4 4 DC n 5 1 DG n 5 2 DA n 5 3 DT n 5 4 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Campylobacter pylori' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hpy188IR, SYNTHETIC GENE CODON OPTIMIZED FOR ESCHERICHIA COLI' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 188 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 585532 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2566 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15BMOD _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'SYNTHETIC OLIGONUCLEOTIDE' 3 1 sample ? ? ? ? ? 'SYNTHETIC OLIGONUCLEOTIDE' 4 1 sample ? ? ? ? ? 'SYNTHETIC OLIGONUCLEOTIDE' 5 1 sample ? ? ? ? ? 'SYNTHETIC OLIGONUCLEOTIDE' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9KJ88_HELPY Q9KJ88 1 ;MAKRKSDIILKSVDDLKDEIDYKDFEYKEYFNLLCELVPNNSLEKLEINAIDEKNMKNEGLVYVFVIQGKIFKIGHSITP ITKRVQSYNCGKVEYRKNGTCSTTNYFVLQSLLKINKIVQVYAFFPEQPTYTLFGKTYQDSFSTSKRAENVILENFIKNH NKKPIGCTQT ; 1 ? 2 PDB 3OR3 3OR3 2 GATCT ? ? 3 PDB 3OR3 3OR3 3 GTTCA ? ? 4 PDB 3OR3 3OR3 4 GAAC ? ? 5 PDB 3OR3 3OR3 5 GATC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OR3 A 11 ? 180 ? Q9KJ88 1 ? 170 ? 1 170 2 1 3OR3 B 11 ? 180 ? Q9KJ88 1 ? 170 ? 1 170 3 2 3OR3 C 1 ? 5 ? 3OR3 -4 ? 0 ? -4 0 4 3 3OR3 D 1 ? 5 ? 3OR3 -4 ? 0 ? -4 0 5 4 3OR3 E 1 ? 4 ? 3OR3 1 ? 4 ? 1 4 6 5 3OR3 F 1 ? 4 ? 3OR3 1 ? 4 ? 1 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OR3 MET A 1 ? UNP Q9KJ88 ? ? 'expression tag' -9 1 1 3OR3 GLY A 2 ? UNP Q9KJ88 ? ? 'expression tag' -8 2 1 3OR3 HIS A 3 ? UNP Q9KJ88 ? ? 'expression tag' -7 3 1 3OR3 HIS A 4 ? UNP Q9KJ88 ? ? 'expression tag' -6 4 1 3OR3 HIS A 5 ? UNP Q9KJ88 ? ? 'expression tag' -5 5 1 3OR3 HIS A 6 ? UNP Q9KJ88 ? ? 'expression tag' -4 6 1 3OR3 HIS A 7 ? UNP Q9KJ88 ? ? 'expression tag' -3 7 1 3OR3 HIS A 8 ? UNP Q9KJ88 ? ? 'expression tag' -2 8 1 3OR3 GLU A 9 ? UNP Q9KJ88 ? ? 'expression tag' -1 9 1 3OR3 PHE A 10 ? UNP Q9KJ88 ? ? 'expression tag' 0 10 2 3OR3 MET B 1 ? UNP Q9KJ88 ? ? 'expression tag' -9 11 2 3OR3 GLY B 2 ? UNP Q9KJ88 ? ? 'expression tag' -8 12 2 3OR3 HIS B 3 ? UNP Q9KJ88 ? ? 'expression tag' -7 13 2 3OR3 HIS B 4 ? UNP Q9KJ88 ? ? 'expression tag' -6 14 2 3OR3 HIS B 5 ? UNP Q9KJ88 ? ? 'expression tag' -5 15 2 3OR3 HIS B 6 ? UNP Q9KJ88 ? ? 'expression tag' -4 16 2 3OR3 HIS B 7 ? UNP Q9KJ88 ? ? 'expression tag' -3 17 2 3OR3 HIS B 8 ? UNP Q9KJ88 ? ? 'expression tag' -2 18 2 3OR3 GLU B 9 ? UNP Q9KJ88 ? ? 'expression tag' -1 19 2 3OR3 PHE B 10 ? UNP Q9KJ88 ? ? 'expression tag' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OR3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_details '0.1 M MES/NaOH pH 6.2 and 30% MPD. CRYSTAL WAS SOAKED IN 0.1 M CaCl2 FOR 18 H., VAPOR DIFFUSION, SITTING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2010-05-11 _diffrn_detector.details 'BENT MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'TRIANGULAR MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.281 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MPG/DESY, HAMBURG BEAMLINE BW6' _diffrn_source.pdbx_synchrotron_site 'MPG/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW6 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.281 # _reflns.entry_id 3OR3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.95 _reflns.number_obs 35348 _reflns.number_all 35348 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_netI_over_sigmaI 37.775 _reflns.B_iso_Wilson_estimate 25.2 _reflns.pdbx_redundancy 13.99 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 95.8 _reflns_shell.Rmerge_I_obs 0.406 _reflns_shell.pdbx_Rsym_value 0.406 _reflns_shell.meanI_over_sigI_obs 6.488 _reflns_shell.pdbx_redundancy 14.78 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1348 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3OR3 _refine.ls_number_reflns_obs 35323 _refine.ls_number_reflns_all 35323 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 97.5 _refine.ls_R_factor_obs 0.17013 _refine.ls_R_factor_all 0.17013 _refine.ls_R_factor_R_work 0.16849 _refine.ls_R_factor_R_free 0.20144 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1723 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.B_iso_mean 22.527 _refine.aniso_B[1][1] 0.39 _refine.aniso_B[2][2] 0.39 _refine.aniso_B[3][3] -0.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;ACCORDING TO THE MS DATA, THE SELENOMETHIONINE SUBSTITUTION WAS SUCCESSFUL ONLY IN PART. THEREFORE, ONLY MET56 WAS MODELED AS SELENOMETHIONINE. HOWEVER, ALL THREE MET POSITIONS ARE LIKELY TO BE PARTIALLY OCCUPIED BY MET AND PARTIALLY BY MSE.THE CNS PROGRAM HAS BEEN USED FOR DNA REFINEMENT. NO SUGAR PUCKER CONSTRAINTS HAVE BEEN APPLIED. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. TLS REFINEMENT HAS BEEN USED. ; _refine.pdbx_starting_model 3OQG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'RESOLUTION SHELLS' _refine.pdbx_overall_ESU_R_Free 0.143 _refine.overall_SU_ML 0.096 _refine.overall_SU_B 6.401 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2844 _refine_hist.pdbx_number_atoms_nucleic_acid 365 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 311 _refine_hist.number_atoms_total 3527 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 4158 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 2639 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.281 2.183 ? 5809 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.943 3.000 ? 6573 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.795 5.000 ? 438 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.888 26.213 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.622 15.000 ? 668 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.470 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.097 0.200 ? 628 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 4258 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.007 0.020 ? 728 'X-RAY DIFFRACTION' ? r_nbd_refined 0.195 0.200 ? 748 'X-RAY DIFFRACTION' ? r_nbd_other 0.232 0.200 ? 2447 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.190 0.200 ? 1951 'X-RAY DIFFRACTION' ? r_nbtor_other 0.112 0.200 ? 1515 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.146 0.200 ? 308 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.092 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.246 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.249 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.198 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 0.231 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.673 1.500 ? 2000 'X-RAY DIFFRACTION' ? r_mcbond_other 0.000 1.500 ? 787 'X-RAY DIFFRACTION' ? r_mcangle_it 1.182 2.000 ? 3323 'X-RAY DIFFRACTION' ? r_scbond_it 1.551 3.000 ? 2158 'X-RAY DIFFRACTION' ? r_scangle_it 2.161 4.500 ? 2479 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.054 _refine_ls_shell.number_reflns_R_work 4717 _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.percent_reflns_obs 96.1 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 213 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 3298 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OR3 _struct.title 'Restriction endonuclease HPY188I in complex with product DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OR3 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text ;ENDONUCLEASE-DNA COMPLEX, RESTRICTION ENZYME, HPY188I, INTERCALATION, GIY-YIG NUCLEASE, CATALYTIC MECHANISM, PSEUDOPALINDROME, HYDROLASE-DNA COMPLEX, restriction endonuclease, DNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 7 ? N N N 8 ? O N N 8 ? P N N 8 ? Q N N 8 ? R N N 8 ? S N N 8 ? # _struct_biol.id 1 _struct_biol.details ;BIOLOGICAL UNIT CONTAINS PROTEIN CHAINS A AND B, AND DNA STRANDS C AND D. THE TETRAMER (ACCORDING TO PDB CONVENTIONS) IS A COMPLEX OF THE DIMERIC RESTRICTION ENZYME WITH ITS SUBSTRATE, DOUBLE STRANDED DNA. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 14 ? ILE A 18 ? ARG A 4 ILE A 8 5 ? 5 HELX_P HELX_P2 2 SER A 22 ? LYS A 27 ? SER A 12 LYS A 17 5 ? 6 HELX_P HELX_P3 3 ASP A 31 ? PHE A 35 ? ASP A 21 PHE A 25 5 ? 5 HELX_P HELX_P4 4 TYR A 37 ? PHE A 41 ? TYR A 27 PHE A 31 5 ? 5 HELX_P HELX_P5 5 ASP A 62 ? MSE A 66 ? ASP A 52 MSE A 56 5 ? 5 HELX_P HELX_P6 6 PRO A 90 ? ASN A 99 ? PRO A 80 ASN A 89 1 ? 10 HELX_P HELX_P7 7 LYS A 102 ? GLY A 109 ? LYS A 92 GLY A 99 1 ? 8 HELX_P HELX_P8 8 SER A 112 ? ASN A 126 ? SER A 102 ASN A 116 1 ? 15 HELX_P HELX_P9 9 SER A 153 ? ASN A 171 ? SER A 143 ASN A 161 1 ? 19 HELX_P HELX_P10 10 ARG B 14 ? ILE B 18 ? ARG B 4 ILE B 8 5 ? 5 HELX_P HELX_P11 11 SER B 22 ? LYS B 27 ? SER B 12 LYS B 17 5 ? 6 HELX_P HELX_P12 12 ASP B 31 ? PHE B 35 ? ASP B 21 PHE B 25 5 ? 5 HELX_P HELX_P13 13 TYR B 37 ? PHE B 41 ? TYR B 27 PHE B 31 5 ? 5 HELX_P HELX_P14 14 ASP B 62 ? MSE B 66 ? ASP B 52 MSE B 56 5 ? 5 HELX_P HELX_P15 15 PRO B 90 ? ASN B 99 ? PRO B 80 ASN B 89 1 ? 10 HELX_P HELX_P16 16 LYS B 102 ? GLY B 109 ? LYS B 92 GLY B 99 1 ? 8 HELX_P HELX_P17 17 SER B 112 ? ASN B 126 ? SER B 102 ASN B 116 1 ? 15 HELX_P HELX_P18 18 SER B 153 ? ASN B 171 ? SER B 143 ASN B 161 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 65 C ? ? ? 1_555 A MSE 66 N ? ? A ASN 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 66 C ? ? ? 1_555 A LYS 67 N ? ? A MSE 56 A LYS 57 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? B ASN 65 C ? ? ? 1_555 B MSE 66 N ? ? B ASN 55 B MSE 56 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? B MSE 66 C ? ? ? 1_555 B LYS 67 N ? ? B MSE 56 B LYS 57 1_555 ? ? ? ? ? ? ? 1.335 ? ? hydrog1 hydrog ? ? C DG 1 N1 A ? ? 1_555 F DC 4 N3 A ? C DG -4 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 A ? ? 1_555 F DC 4 O2 A ? C DG -4 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 A ? ? 1_555 F DC 4 N4 A ? C DG -4 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N1 A ? ? 1_555 F DT 3 N3 A ? C DA -3 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 2 N6 A ? ? 1_555 F DT 3 O4 A ? C DA -3 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 3 N3 A ? ? 1_555 F DA 2 N1 A ? C DT -2 F DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 3 O4 A ? ? 1_555 F DA 2 N6 A ? C DT -2 F DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 4 N3 A ? ? 1_555 F DG 1 N1 A ? C DC -1 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 4 N4 A ? ? 1_555 F DG 1 O6 A ? C DC -1 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 4 O2 A ? ? 1_555 F DG 1 N2 A ? C DC -1 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 5 N3 A ? ? 1_555 D DA 5 N1 A ? C DT 0 D DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 5 O4 A ? ? 1_555 D DA 5 N6 A ? C DT 0 D DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DG 1 N1 A ? ? 1_555 E DC 4 N3 A ? D DG -4 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DG 1 N2 A ? ? 1_555 E DC 4 O2 A ? D DG -4 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D DG 1 O6 A ? ? 1_555 E DC 4 N4 A ? D DG -4 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DT 2 N3 A ? ? 1_555 E DA 3 N1 A ? D DT -3 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DT 2 O4 A ? ? 1_555 E DA 3 N6 A ? D DT -3 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DT 3 N3 A ? ? 1_555 E DA 2 N1 A ? D DT -2 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DT 3 O4 A ? ? 1_555 E DA 2 N6 A ? D DT -2 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DC 4 N3 A ? ? 1_555 E DG 1 N1 A ? D DC -1 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DC 4 N4 A ? ? 1_555 E DG 1 O6 A ? D DC -1 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DC 4 O2 A ? ? 1_555 E DG 1 N2 A ? D DC -1 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 55 ? ALA A 60 ? LYS A 45 ALA A 50 A 2 ASN A 42 ? ASN A 50 ? ASN A 32 ASN A 40 A 3 VAL A 129 ? PHE A 134 ? VAL A 119 PHE A 124 A 4 LEU A 71 ? ILE A 77 ? LEU A 61 ILE A 67 A 5 LYS A 80 ? SER A 87 ? LYS A 70 SER A 77 B 1 TYR A 141 ? LEU A 143 ? TYR A 131 LEU A 133 B 2 LYS A 146 ? TYR A 148 ? LYS A 136 TYR A 138 C 1 LYS B 55 ? ALA B 60 ? LYS B 45 ALA B 50 C 2 ASN B 42 ? ASN B 50 ? ASN B 32 ASN B 40 C 3 VAL B 129 ? PHE B 134 ? VAL B 119 PHE B 124 C 4 LEU B 71 ? ILE B 77 ? LEU B 61 ILE B 67 C 5 LYS B 80 ? SER B 87 ? LYS B 70 SER B 77 D 1 THR B 140 ? LEU B 143 ? THR B 130 LEU B 133 D 2 LYS B 146 ? GLN B 149 ? LYS B 136 GLN B 139 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 57 ? O GLU A 47 N VAL A 48 ? N VAL A 38 A 2 3 N LEU A 44 ? N LEU A 34 O VAL A 131 ? O VAL A 121 A 3 4 O GLN A 130 ? O GLN A 120 N VAL A 76 ? N VAL A 66 A 4 5 N PHE A 75 ? N PHE A 65 O LYS A 83 ? O LYS A 73 B 1 2 N TYR A 141 ? N TYR A 131 O TYR A 148 ? O TYR A 138 C 1 2 O GLU B 57 ? O GLU B 47 N VAL B 48 ? N VAL B 38 C 2 3 N CYS B 45 ? N CYS B 35 O VAL B 131 ? O VAL B 121 C 3 4 O GLN B 130 ? O GLN B 120 N VAL B 76 ? N VAL B 66 C 4 5 N PHE B 75 ? N PHE B 65 O LYS B 83 ? O LYS B 73 D 1 2 N TYR B 141 ? N TYR B 131 O TYR B 148 ? O TYR B 138 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Author ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 171, CONFORMER A' AC2 Author ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 172, CONFORMER A' AC3 Author A CA 173 ? 6 'BINDING SITE FOR RESIDUE CA A 173' AC4 Author A CL 174 ? 4 'BINDING SITE FOR RESIDUE CL A 174' AC5 Author ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 175, CONFORMER A' AC7 Author B CL 171 ? 4 'BINDING SITE FOR RESIDUE CL B 171' BC1 Author ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 171, CONFORMER B' BC2 Author ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 172, CONFORMER B' BC5 Author ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 175, CONFORMER B' BC6 Author A CL 176 ? 2 'BINDING SITE FOR RESIDUE CL A 176' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 159 ? GLU A 149 . ? 1_555 ? 2 AC1 6 HIS B 86 ? HIS B 76 . ? 1_555 ? 3 AC1 6 DA D 5 ? DA D 0 . ? 1_555 ? 4 AC1 6 DG F 1 ? DG F 1 . ? 1_555 ? 5 AC1 6 HOH Q . ? HOH D 53 . ? 1_555 ? 6 AC1 6 HOH S . ? HOH F 39 . ? 1_555 ? 7 AC2 6 GLU B 159 ? GLU B 149 . ? 1_555 ? 8 AC2 6 HIS A 86 ? HIS A 76 . ? 1_555 ? 9 AC2 6 DT C 5 ? DT C 0 . ? 1_555 ? 10 AC2 6 DG E 1 ? DG E 1 . ? 1_555 ? 11 AC2 6 HOH P . ? HOH C 358 . ? 1_555 ? 12 AC2 6 HOH S . ? HOH F 52 . ? 1_555 ? 13 AC3 6 ASP A 28 ? ASP A 18 . ? 1_555 ? 14 AC3 6 ASP B 28 ? ASP B 18 . ? 6_455 ? 15 AC3 6 HOH N . ? HOH A 218 . ? 1_555 ? 16 AC3 6 HOH N . ? HOH A 219 . ? 1_555 ? 17 AC3 6 HOH N . ? HOH A 221 . ? 1_555 ? 18 AC3 6 HOH N . ? HOH A 222 . ? 1_555 ? 19 AC4 4 ASN A 169 ? ASN A 159 . ? 1_555 ? 20 AC4 4 HIS A 170 ? HIS A 160 . ? 1_555 ? 21 AC4 4 GLU B 36 ? GLU B 26 . ? 1_555 ? 22 AC4 4 HOH N . ? HOH A 210 . ? 1_555 ? 23 AC5 4 SER B 153 ? SER B 143 . ? 1_555 ? 24 AC5 4 HOH O . ? HOH B 201 . ? 1_555 ? 25 AC5 4 HOH O . ? HOH B 230 . ? 1_555 ? 26 AC5 4 HOH N . ? HOH A 178 . ? 1_555 ? 27 AC7 4 GLU A 36 ? GLU A 26 . ? 1_555 ? 28 AC7 4 ASN B 169 ? ASN B 159 . ? 1_555 ? 29 AC7 4 HIS B 170 ? HIS B 160 . ? 1_555 ? 30 AC7 4 HOH O . ? HOH B 176 . ? 1_555 ? 31 BC1 6 GLU A 159 ? GLU A 149 . ? 1_555 ? 32 BC1 6 HIS B 86 ? HIS B 76 . ? 1_555 ? 33 BC1 6 DT C 5 ? DT C 0 . ? 1_555 ? 34 BC1 6 DG E 1 ? DG E 1 . ? 1_555 ? 35 BC1 6 HOH Q . ? HOH D 53 . ? 1_555 ? 36 BC1 6 HOH S . ? HOH F 39 . ? 1_555 ? 37 BC2 6 GLU B 159 ? GLU B 149 . ? 1_555 ? 38 BC2 6 HIS A 86 ? HIS A 76 . ? 1_555 ? 39 BC2 6 DA D 5 ? DA D 0 . ? 1_555 ? 40 BC2 6 DG F 1 ? DG F 1 . ? 1_555 ? 41 BC2 6 HOH P . ? HOH C 358 . ? 1_555 ? 42 BC2 6 HOH S . ? HOH F 52 . ? 1_555 ? 43 BC5 4 SER A 153 ? SER A 143 . ? 1_555 ? 44 BC5 4 HOH N . ? HOH A 276 . ? 1_555 ? 45 BC5 4 HOH R . ? HOH E 183 . ? 1_555 ? 46 BC5 4 HOH O . ? HOH B 181 . ? 1_555 ? 47 BC6 2 LYS A 102 ? LYS A 92 . ? 1_555 ? 48 BC6 2 HOH Q . ? HOH D 323 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OR3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OR3 _atom_sites.fract_transf_matrix[1][1] 0.015292 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015292 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004509 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -9 ? ? ? A . n A 1 2 GLY 2 -8 ? ? ? A . n A 1 3 HIS 3 -7 ? ? ? A . n A 1 4 HIS 4 -6 ? ? ? A . n A 1 5 HIS 5 -5 ? ? ? A . n A 1 6 HIS 6 -4 ? ? ? A . n A 1 7 HIS 7 -3 ? ? ? A . n A 1 8 HIS 8 -2 -2 HIS HIS A . n A 1 9 GLU 9 -1 -1 GLU GLU A . n A 1 10 PHE 10 0 0 PHE PHE A . n A 1 11 MET 11 1 1 MET MET A . n A 1 12 ALA 12 2 2 ALA ALA A . n A 1 13 LYS 13 3 3 LYS LYS A . n A 1 14 ARG 14 4 4 ARG ARG A . n A 1 15 LYS 15 5 5 LYS LYS A . n A 1 16 SER 16 6 6 SER SER A . n A 1 17 ASP 17 7 7 ASP ASP A . n A 1 18 ILE 18 8 8 ILE ILE A . n A 1 19 ILE 19 9 9 ILE ILE A . n A 1 20 LEU 20 10 10 LEU LEU A . n A 1 21 LYS 21 11 11 LYS LYS A . n A 1 22 SER 22 12 12 SER SER A . n A 1 23 VAL 23 13 13 VAL VAL A . n A 1 24 ASP 24 14 14 ASP ASP A . n A 1 25 ASP 25 15 15 ASP ASP A . n A 1 26 LEU 26 16 16 LEU LEU A . n A 1 27 LYS 27 17 17 LYS LYS A . n A 1 28 ASP 28 18 18 ASP ASP A . n A 1 29 GLU 29 19 19 GLU GLU A . n A 1 30 ILE 30 20 20 ILE ILE A . n A 1 31 ASP 31 21 21 ASP ASP A . n A 1 32 TYR 32 22 22 TYR TYR A . n A 1 33 LYS 33 23 23 LYS LYS A . n A 1 34 ASP 34 24 24 ASP ASP A . n A 1 35 PHE 35 25 25 PHE PHE A . n A 1 36 GLU 36 26 26 GLU GLU A . n A 1 37 TYR 37 27 27 TYR TYR A . n A 1 38 LYS 38 28 28 LYS LYS A . n A 1 39 GLU 39 29 29 GLU GLU A . n A 1 40 TYR 40 30 30 TYR TYR A . n A 1 41 PHE 41 31 31 PHE PHE A . n A 1 42 ASN 42 32 32 ASN ASN A . n A 1 43 LEU 43 33 33 LEU LEU A . n A 1 44 LEU 44 34 34 LEU LEU A . n A 1 45 CYS 45 35 35 CYS CYS A . n A 1 46 GLU 46 36 36 GLU GLU A . n A 1 47 LEU 47 37 37 LEU LEU A . n A 1 48 VAL 48 38 38 VAL VAL A . n A 1 49 PRO 49 39 39 PRO PRO A . n A 1 50 ASN 50 40 40 ASN ASN A . n A 1 51 ASN 51 41 41 ASN ASN A . n A 1 52 SER 52 42 42 SER SER A . n A 1 53 LEU 53 43 43 LEU LEU A . n A 1 54 GLU 54 44 44 GLU GLU A . n A 1 55 LYS 55 45 45 LYS LYS A . n A 1 56 LEU 56 46 46 LEU LEU A . n A 1 57 GLU 57 47 47 GLU GLU A . n A 1 58 ILE 58 48 48 ILE ILE A . n A 1 59 ASN 59 49 49 ASN ASN A . n A 1 60 ALA 60 50 50 ALA ALA A . n A 1 61 ILE 61 51 51 ILE ILE A . n A 1 62 ASP 62 52 52 ASP ASP A . n A 1 63 GLU 63 53 53 GLU GLU A . n A 1 64 LYS 64 54 54 LYS LYS A . n A 1 65 ASN 65 55 55 ASN ASN A . n A 1 66 MSE 66 56 56 MSE MSE A . n A 1 67 LYS 67 57 57 LYS LYS A . n A 1 68 ASN 68 58 58 ASN ASN A . n A 1 69 GLU 69 59 59 GLU GLU A . n A 1 70 GLY 70 60 60 GLY GLY A . n A 1 71 LEU 71 61 61 LEU LEU A . n A 1 72 VAL 72 62 62 VAL VAL A . n A 1 73 TYR 73 63 63 TYR TYR A . n A 1 74 VAL 74 64 64 VAL VAL A . n A 1 75 PHE 75 65 65 PHE PHE A . n A 1 76 VAL 76 66 66 VAL VAL A . n A 1 77 ILE 77 67 67 ILE ILE A . n A 1 78 GLN 78 68 68 GLN GLN A . n A 1 79 GLY 79 69 69 GLY GLY A . n A 1 80 LYS 80 70 70 LYS LYS A . n A 1 81 ILE 81 71 71 ILE ILE A . n A 1 82 PHE 82 72 72 PHE PHE A . n A 1 83 LYS 83 73 73 LYS LYS A . n A 1 84 ILE 84 74 74 ILE ILE A . n A 1 85 GLY 85 75 75 GLY GLY A . n A 1 86 HIS 86 76 76 HIS HIS A . n A 1 87 SER 87 77 77 SER SER A . n A 1 88 ILE 88 78 78 ILE ILE A . n A 1 89 THR 89 79 79 THR THR A . n A 1 90 PRO 90 80 80 PRO PRO A . n A 1 91 ILE 91 81 81 ILE ILE A . n A 1 92 THR 92 82 82 THR THR A . n A 1 93 LYS 93 83 83 LYS LYS A . n A 1 94 ARG 94 84 84 ARG ARG A . n A 1 95 VAL 95 85 85 VAL VAL A . n A 1 96 GLN 96 86 86 GLN GLN A . n A 1 97 SER 97 87 87 SER SER A . n A 1 98 TYR 98 88 88 TYR TYR A . n A 1 99 ASN 99 89 89 ASN ASN A . n A 1 100 CYS 100 90 90 CYS CYS A . n A 1 101 GLY 101 91 91 GLY GLY A . n A 1 102 LYS 102 92 92 LYS LYS A . n A 1 103 VAL 103 93 93 VAL VAL A . n A 1 104 GLU 104 94 94 GLU GLU A . n A 1 105 TYR 105 95 95 TYR TYR A . n A 1 106 ARG 106 96 96 ARG ARG A . n A 1 107 LYS 107 97 97 LYS LYS A . n A 1 108 ASN 108 98 98 ASN ASN A . n A 1 109 GLY 109 99 99 GLY GLY A . n A 1 110 THR 110 100 100 THR THR A . n A 1 111 CYS 111 101 101 CYS CYS A . n A 1 112 SER 112 102 102 SER SER A . n A 1 113 THR 113 103 103 THR THR A . n A 1 114 THR 114 104 104 THR THR A . n A 1 115 ASN 115 105 105 ASN ASN A . n A 1 116 TYR 116 106 106 TYR TYR A . n A 1 117 PHE 117 107 107 PHE PHE A . n A 1 118 VAL 118 108 108 VAL VAL A . n A 1 119 LEU 119 109 109 LEU LEU A . n A 1 120 GLN 120 110 110 GLN GLN A . n A 1 121 SER 121 111 111 SER SER A . n A 1 122 LEU 122 112 112 LEU LEU A . n A 1 123 LEU 123 113 113 LEU LEU A . n A 1 124 LYS 124 114 114 LYS LYS A . n A 1 125 ILE 125 115 115 ILE ILE A . n A 1 126 ASN 126 116 116 ASN ASN A . n A 1 127 LYS 127 117 117 LYS LYS A . n A 1 128 ILE 128 118 118 ILE ILE A . n A 1 129 VAL 129 119 119 VAL VAL A . n A 1 130 GLN 130 120 120 GLN GLN A . n A 1 131 VAL 131 121 121 VAL VAL A . n A 1 132 TYR 132 122 122 TYR TYR A . n A 1 133 ALA 133 123 123 ALA ALA A . n A 1 134 PHE 134 124 124 PHE PHE A . n A 1 135 PHE 135 125 125 PHE PHE A . n A 1 136 PRO 136 126 126 PRO PRO A . n A 1 137 GLU 137 127 127 GLU GLU A . n A 1 138 GLN 138 128 128 GLN GLN A . n A 1 139 PRO 139 129 129 PRO PRO A . n A 1 140 THR 140 130 130 THR THR A . n A 1 141 TYR 141 131 131 TYR TYR A . n A 1 142 THR 142 132 132 THR THR A . n A 1 143 LEU 143 133 133 LEU LEU A . n A 1 144 PHE 144 134 134 PHE PHE A . n A 1 145 GLY 145 135 135 GLY GLY A . n A 1 146 LYS 146 136 136 LYS LYS A . n A 1 147 THR 147 137 137 THR THR A . n A 1 148 TYR 148 138 138 TYR TYR A . n A 1 149 GLN 149 139 139 GLN GLN A . n A 1 150 ASP 150 140 140 ASP ASP A . n A 1 151 SER 151 141 141 SER SER A . n A 1 152 PHE 152 142 142 PHE PHE A . n A 1 153 SER 153 143 143 SER SER A . n A 1 154 THR 154 144 144 THR THR A . n A 1 155 SER 155 145 145 SER SER A . n A 1 156 LYS 156 146 146 LYS LYS A . n A 1 157 ARG 157 147 147 ARG ARG A . n A 1 158 ALA 158 148 148 ALA ALA A . n A 1 159 GLU 159 149 149 GLU GLU A . n A 1 160 ASN 160 150 150 ASN ASN A . n A 1 161 VAL 161 151 151 VAL VAL A . n A 1 162 ILE 162 152 152 ILE ILE A . n A 1 163 LEU 163 153 153 LEU LEU A . n A 1 164 GLU 164 154 154 GLU GLU A . n A 1 165 ASN 165 155 155 ASN ASN A . n A 1 166 PHE 166 156 156 PHE PHE A . n A 1 167 ILE 167 157 157 ILE ILE A . n A 1 168 LYS 168 158 158 LYS LYS A . n A 1 169 ASN 169 159 159 ASN ASN A . n A 1 170 HIS 170 160 160 HIS HIS A . n A 1 171 ASN 171 161 161 ASN ASN A . n A 1 172 LYS 172 162 162 LYS LYS A . n A 1 173 LYS 173 163 163 LYS LYS A . n A 1 174 PRO 174 164 164 PRO PRO A . n A 1 175 ILE 175 165 165 ILE ILE A . n A 1 176 GLY 176 166 166 GLY GLY A . n A 1 177 CYS 177 167 167 CYS CYS A . n A 1 178 THR 178 168 168 THR THR A . n A 1 179 GLN 179 169 169 GLN GLN A . n A 1 180 THR 180 170 170 THR THR A . n B 1 1 MET 1 -9 ? ? ? B . n B 1 2 GLY 2 -8 ? ? ? B . n B 1 3 HIS 3 -7 ? ? ? B . n B 1 4 HIS 4 -6 ? ? ? B . n B 1 5 HIS 5 -5 ? ? ? B . n B 1 6 HIS 6 -4 ? ? ? B . n B 1 7 HIS 7 -3 ? ? ? B . n B 1 8 HIS 8 -2 -2 HIS HIS B . n B 1 9 GLU 9 -1 -1 GLU GLU B . n B 1 10 PHE 10 0 0 PHE PHE B . n B 1 11 MET 11 1 1 MET MET B . n B 1 12 ALA 12 2 2 ALA ALA B . n B 1 13 LYS 13 3 3 LYS LYS B . n B 1 14 ARG 14 4 4 ARG ARG B . n B 1 15 LYS 15 5 5 LYS LYS B . n B 1 16 SER 16 6 6 SER SER B . n B 1 17 ASP 17 7 7 ASP ASP B . n B 1 18 ILE 18 8 8 ILE ILE B . n B 1 19 ILE 19 9 9 ILE ILE B . n B 1 20 LEU 20 10 10 LEU LEU B . n B 1 21 LYS 21 11 11 LYS LYS B . n B 1 22 SER 22 12 12 SER SER B . n B 1 23 VAL 23 13 13 VAL VAL B . n B 1 24 ASP 24 14 14 ASP ASP B . n B 1 25 ASP 25 15 15 ASP ASP B . n B 1 26 LEU 26 16 16 LEU LEU B . n B 1 27 LYS 27 17 17 LYS LYS B . n B 1 28 ASP 28 18 18 ASP ASP B . n B 1 29 GLU 29 19 19 GLU GLU B . n B 1 30 ILE 30 20 20 ILE ILE B . n B 1 31 ASP 31 21 21 ASP ASP B . n B 1 32 TYR 32 22 22 TYR TYR B . n B 1 33 LYS 33 23 23 LYS LYS B . n B 1 34 ASP 34 24 24 ASP ASP B . n B 1 35 PHE 35 25 25 PHE PHE B . n B 1 36 GLU 36 26 26 GLU GLU B . n B 1 37 TYR 37 27 27 TYR TYR B . n B 1 38 LYS 38 28 28 LYS LYS B . n B 1 39 GLU 39 29 29 GLU GLU B . n B 1 40 TYR 40 30 30 TYR TYR B . n B 1 41 PHE 41 31 31 PHE PHE B . n B 1 42 ASN 42 32 32 ASN ASN B . n B 1 43 LEU 43 33 33 LEU LEU B . n B 1 44 LEU 44 34 34 LEU LEU B . n B 1 45 CYS 45 35 35 CYS CYS B . n B 1 46 GLU 46 36 36 GLU GLU B . n B 1 47 LEU 47 37 37 LEU LEU B . n B 1 48 VAL 48 38 38 VAL VAL B . n B 1 49 PRO 49 39 39 PRO PRO B . n B 1 50 ASN 50 40 40 ASN ASN B . n B 1 51 ASN 51 41 41 ASN ASN B . n B 1 52 SER 52 42 42 SER SER B . n B 1 53 LEU 53 43 43 LEU LEU B . n B 1 54 GLU 54 44 44 GLU GLU B . n B 1 55 LYS 55 45 45 LYS LYS B . n B 1 56 LEU 56 46 46 LEU LEU B . n B 1 57 GLU 57 47 47 GLU GLU B . n B 1 58 ILE 58 48 48 ILE ILE B . n B 1 59 ASN 59 49 49 ASN ASN B . n B 1 60 ALA 60 50 50 ALA ALA B . n B 1 61 ILE 61 51 51 ILE ILE B . n B 1 62 ASP 62 52 52 ASP ASP B . n B 1 63 GLU 63 53 53 GLU GLU B . n B 1 64 LYS 64 54 54 LYS LYS B . n B 1 65 ASN 65 55 55 ASN ASN B . n B 1 66 MSE 66 56 56 MSE MSE B . n B 1 67 LYS 67 57 57 LYS LYS B . n B 1 68 ASN 68 58 58 ASN ASN B . n B 1 69 GLU 69 59 59 GLU GLU B . n B 1 70 GLY 70 60 60 GLY GLY B . n B 1 71 LEU 71 61 61 LEU LEU B . n B 1 72 VAL 72 62 62 VAL VAL B . n B 1 73 TYR 73 63 63 TYR TYR B . n B 1 74 VAL 74 64 64 VAL VAL B . n B 1 75 PHE 75 65 65 PHE PHE B . n B 1 76 VAL 76 66 66 VAL VAL B . n B 1 77 ILE 77 67 67 ILE ILE B . n B 1 78 GLN 78 68 68 GLN GLN B . n B 1 79 GLY 79 69 69 GLY GLY B . n B 1 80 LYS 80 70 70 LYS LYS B . n B 1 81 ILE 81 71 71 ILE ILE B . n B 1 82 PHE 82 72 72 PHE PHE B . n B 1 83 LYS 83 73 73 LYS LYS B . n B 1 84 ILE 84 74 74 ILE ILE B . n B 1 85 GLY 85 75 75 GLY GLY B . n B 1 86 HIS 86 76 76 HIS HIS B . n B 1 87 SER 87 77 77 SER SER B . n B 1 88 ILE 88 78 78 ILE ILE B . n B 1 89 THR 89 79 79 THR THR B . n B 1 90 PRO 90 80 80 PRO PRO B . n B 1 91 ILE 91 81 81 ILE ILE B . n B 1 92 THR 92 82 82 THR THR B . n B 1 93 LYS 93 83 83 LYS LYS B . n B 1 94 ARG 94 84 84 ARG ARG B . n B 1 95 VAL 95 85 85 VAL VAL B . n B 1 96 GLN 96 86 86 GLN GLN B . n B 1 97 SER 97 87 87 SER SER B . n B 1 98 TYR 98 88 88 TYR TYR B . n B 1 99 ASN 99 89 89 ASN ASN B . n B 1 100 CYS 100 90 90 CYS CYS B . n B 1 101 GLY 101 91 91 GLY GLY B . n B 1 102 LYS 102 92 92 LYS LYS B . n B 1 103 VAL 103 93 93 VAL VAL B . n B 1 104 GLU 104 94 94 GLU GLU B . n B 1 105 TYR 105 95 95 TYR TYR B . n B 1 106 ARG 106 96 96 ARG ARG B . n B 1 107 LYS 107 97 97 LYS LYS B . n B 1 108 ASN 108 98 98 ASN ASN B . n B 1 109 GLY 109 99 99 GLY GLY B . n B 1 110 THR 110 100 100 THR THR B . n B 1 111 CYS 111 101 101 CYS CYS B . n B 1 112 SER 112 102 102 SER SER B . n B 1 113 THR 113 103 103 THR THR B . n B 1 114 THR 114 104 104 THR THR B . n B 1 115 ASN 115 105 105 ASN ASN B . n B 1 116 TYR 116 106 106 TYR TYR B . n B 1 117 PHE 117 107 107 PHE PHE B . n B 1 118 VAL 118 108 108 VAL VAL B . n B 1 119 LEU 119 109 109 LEU LEU B . n B 1 120 GLN 120 110 110 GLN GLN B . n B 1 121 SER 121 111 111 SER SER B . n B 1 122 LEU 122 112 112 LEU LEU B . n B 1 123 LEU 123 113 113 LEU LEU B . n B 1 124 LYS 124 114 114 LYS LYS B . n B 1 125 ILE 125 115 115 ILE ILE B . n B 1 126 ASN 126 116 116 ASN ASN B . n B 1 127 LYS 127 117 117 LYS LYS B . n B 1 128 ILE 128 118 118 ILE ILE B . n B 1 129 VAL 129 119 119 VAL VAL B . n B 1 130 GLN 130 120 120 GLN GLN B . n B 1 131 VAL 131 121 121 VAL VAL B . n B 1 132 TYR 132 122 122 TYR TYR B . n B 1 133 ALA 133 123 123 ALA ALA B . n B 1 134 PHE 134 124 124 PHE PHE B . n B 1 135 PHE 135 125 125 PHE PHE B . n B 1 136 PRO 136 126 126 PRO PRO B . n B 1 137 GLU 137 127 127 GLU GLU B . n B 1 138 GLN 138 128 128 GLN GLN B . n B 1 139 PRO 139 129 129 PRO PRO B . n B 1 140 THR 140 130 130 THR THR B . n B 1 141 TYR 141 131 131 TYR TYR B . n B 1 142 THR 142 132 132 THR THR B . n B 1 143 LEU 143 133 133 LEU LEU B . n B 1 144 PHE 144 134 134 PHE PHE B . n B 1 145 GLY 145 135 135 GLY GLY B . n B 1 146 LYS 146 136 136 LYS LYS B . n B 1 147 THR 147 137 137 THR THR B . n B 1 148 TYR 148 138 138 TYR TYR B . n B 1 149 GLN 149 139 139 GLN GLN B . n B 1 150 ASP 150 140 140 ASP ASP B . n B 1 151 SER 151 141 141 SER SER B . n B 1 152 PHE 152 142 142 PHE PHE B . n B 1 153 SER 153 143 143 SER SER B . n B 1 154 THR 154 144 144 THR THR B . n B 1 155 SER 155 145 145 SER SER B . n B 1 156 LYS 156 146 146 LYS LYS B . n B 1 157 ARG 157 147 147 ARG ARG B . n B 1 158 ALA 158 148 148 ALA ALA B . n B 1 159 GLU 159 149 149 GLU GLU B . n B 1 160 ASN 160 150 150 ASN ASN B . n B 1 161 VAL 161 151 151 VAL VAL B . n B 1 162 ILE 162 152 152 ILE ILE B . n B 1 163 LEU 163 153 153 LEU LEU B . n B 1 164 GLU 164 154 154 GLU GLU B . n B 1 165 ASN 165 155 155 ASN ASN B . n B 1 166 PHE 166 156 156 PHE PHE B . n B 1 167 ILE 167 157 157 ILE ILE B . n B 1 168 LYS 168 158 158 LYS LYS B . n B 1 169 ASN 169 159 159 ASN ASN B . n B 1 170 HIS 170 160 160 HIS HIS B . n B 1 171 ASN 171 161 161 ASN ASN B . n B 1 172 LYS 172 162 162 LYS LYS B . n B 1 173 LYS 173 163 163 LYS LYS B . n B 1 174 PRO 174 164 164 PRO PRO B . n B 1 175 ILE 175 165 165 ILE ILE B . n B 1 176 GLY 176 166 166 GLY GLY B . n B 1 177 CYS 177 167 167 CYS CYS B . n B 1 178 THR 178 168 168 THR THR B . n B 1 179 GLN 179 169 169 GLN GLN B . n B 1 180 THR 180 170 170 THR THR B . n C 2 1 DG 1 -4 -4 DG G C . n C 2 2 DA 2 -3 -3 DA A C . n C 2 3 DT 3 -2 -2 DT T C . n C 2 4 DC 4 -1 -1 DC C C . n C 2 5 DT 5 0 0 DT T C . n D 3 1 DG 1 -4 -4 DG G D . n D 3 2 DT 2 -3 -3 DT T D . n D 3 3 DT 3 -2 -2 DT T D . n D 3 4 DC 4 -1 -1 DC C D . n D 3 5 DA 5 0 0 DA A D . n E 4 1 DG 1 1 1 DG G E . n E 4 2 DA 2 2 2 DA A E . n E 4 3 DA 3 3 3 DA A E . n E 4 4 DC 4 4 4 DC C E . n F 5 1 DG 1 1 1 DG G F . n F 5 2 DA 2 2 2 DA A F . n F 5 3 DT 3 3 3 DT T F . n F 5 4 DC 4 4 4 DC C F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 6 CA 1 171 1 CA CA A . H 6 CA 1 172 2 CA CA A . I 6 CA 1 173 3 CA CA A . J 7 CL 1 174 4 CL CL A . K 7 CL 1 175 6 CL CL A . L 7 CL 1 176 7 CL CL A . M 7 CL 1 171 5 CL CL B . N 8 HOH 1 177 7 HOH HOH A . N 8 HOH 2 178 11 HOH HOH A . N 8 HOH 3 179 179 HOH HOH A . N 8 HOH 4 180 180 HOH HOH A . N 8 HOH 5 181 181 HOH HOH A . N 8 HOH 6 182 20 HOH HOH A . N 8 HOH 7 183 21 HOH HOH A . N 8 HOH 8 184 184 HOH HOH A . N 8 HOH 9 185 23 HOH HOH A . N 8 HOH 10 186 32 HOH HOH A . N 8 HOH 11 187 187 HOH HOH A . N 8 HOH 12 188 188 HOH HOH A . N 8 HOH 13 189 189 HOH HOH A . N 8 HOH 14 190 35 HOH HOH A . N 8 HOH 15 191 191 HOH HOH A . N 8 HOH 16 192 37 HOH HOH A . N 8 HOH 17 193 193 HOH HOH A . N 8 HOH 18 194 38 HOH HOH A . N 8 HOH 19 195 195 HOH HOH A . N 8 HOH 20 196 196 HOH HOH A . N 8 HOH 21 197 197 HOH HOH A . N 8 HOH 22 198 43 HOH HOH A . N 8 HOH 23 199 45 HOH HOH A . N 8 HOH 24 200 200 HOH HOH A . N 8 HOH 25 201 46 HOH HOH A . N 8 HOH 26 202 47 HOH HOH A . N 8 HOH 27 203 51 HOH HOH A . N 8 HOH 28 204 204 HOH HOH A . N 8 HOH 29 205 54 HOH HOH A . N 8 HOH 30 206 206 HOH HOH A . N 8 HOH 31 207 55 HOH HOH A . N 8 HOH 32 208 208 HOH HOH A . N 8 HOH 33 209 57 HOH HOH A . N 8 HOH 34 210 61 HOH HOH A . N 8 HOH 35 211 211 HOH HOH A . N 8 HOH 36 212 212 HOH HOH A . N 8 HOH 37 213 213 HOH HOH A . N 8 HOH 38 214 62 HOH HOH A . N 8 HOH 39 215 215 HOH HOH A . N 8 HOH 40 216 66 HOH HOH A . N 8 HOH 41 217 217 HOH HOH A . N 8 HOH 42 218 218 HOH HOH A . N 8 HOH 43 219 219 HOH HOH A . N 8 HOH 44 220 220 HOH HOH A . N 8 HOH 45 221 221 HOH HOH A . N 8 HOH 46 222 222 HOH HOH A . N 8 HOH 47 223 71 HOH HOH A . N 8 HOH 48 224 224 HOH HOH A . N 8 HOH 49 225 72 HOH HOH A . N 8 HOH 50 226 74 HOH HOH A . N 8 HOH 51 227 79 HOH HOH A . N 8 HOH 52 228 80 HOH HOH A . N 8 HOH 53 229 229 HOH HOH A . N 8 HOH 54 230 82 HOH HOH A . N 8 HOH 55 231 83 HOH HOH A . N 8 HOH 56 232 84 HOH HOH A . N 8 HOH 57 233 233 HOH HOH A . N 8 HOH 58 234 234 HOH HOH A . N 8 HOH 59 235 89 HOH HOH A . N 8 HOH 60 236 90 HOH HOH A . N 8 HOH 61 237 93 HOH HOH A . N 8 HOH 62 238 238 HOH HOH A . N 8 HOH 63 239 239 HOH HOH A . N 8 HOH 64 240 94 HOH HOH A . N 8 HOH 65 241 95 HOH HOH A . N 8 HOH 66 242 242 HOH HOH A . N 8 HOH 67 243 243 HOH HOH A . N 8 HOH 68 244 244 HOH HOH A . N 8 HOH 69 245 97 HOH HOH A . N 8 HOH 70 246 103 HOH HOH A . N 8 HOH 71 247 105 HOH HOH A . N 8 HOH 72 248 107 HOH HOH A . N 8 HOH 73 249 116 HOH HOH A . N 8 HOH 74 250 119 HOH HOH A . N 8 HOH 75 251 121 HOH HOH A . N 8 HOH 76 252 252 HOH HOH A . N 8 HOH 77 253 125 HOH HOH A . N 8 HOH 78 254 254 HOH HOH A . N 8 HOH 79 255 127 HOH HOH A . N 8 HOH 80 256 129 HOH HOH A . N 8 HOH 81 257 130 HOH HOH A . N 8 HOH 82 258 258 HOH HOH A . N 8 HOH 83 259 132 HOH HOH A . N 8 HOH 84 260 260 HOH HOH A . N 8 HOH 85 261 261 HOH HOH A . N 8 HOH 86 262 138 HOH HOH A . N 8 HOH 87 263 140 HOH HOH A . N 8 HOH 88 264 264 HOH HOH A . N 8 HOH 89 265 144 HOH HOH A . N 8 HOH 90 266 146 HOH HOH A . N 8 HOH 91 267 150 HOH HOH A . N 8 HOH 92 268 153 HOH HOH A . N 8 HOH 93 269 155 HOH HOH A . N 8 HOH 94 270 156 HOH HOH A . N 8 HOH 95 271 158 HOH HOH A . N 8 HOH 96 272 161 HOH HOH A . N 8 HOH 97 273 168 HOH HOH A . N 8 HOH 98 274 274 HOH HOH A . N 8 HOH 99 275 170 HOH HOH A . N 8 HOH 100 276 276 HOH HOH A . N 8 HOH 101 277 172 HOH HOH A . N 8 HOH 102 278 175 HOH HOH A . N 8 HOH 103 279 279 HOH HOH A . N 8 HOH 104 280 17 HOH HOH A . N 8 HOH 105 282 282 HOH HOH A . N 8 HOH 106 287 287 HOH HOH A . N 8 HOH 107 291 291 HOH HOH A . N 8 HOH 108 295 295 HOH HOH A . N 8 HOH 109 296 296 HOH HOH A . N 8 HOH 110 301 301 HOH HOH A . N 8 HOH 111 304 304 HOH HOH A . N 8 HOH 112 308 308 HOH HOH A . N 8 HOH 113 316 316 HOH HOH A . N 8 HOH 114 319 319 HOH HOH A . N 8 HOH 115 320 320 HOH HOH A . N 8 HOH 116 321 321 HOH HOH A . N 8 HOH 117 325 325 HOH HOH A . N 8 HOH 118 326 326 HOH HOH A . N 8 HOH 119 328 328 HOH HOH A . N 8 HOH 120 330 330 HOH HOH A . N 8 HOH 121 332 332 HOH HOH A . N 8 HOH 122 335 335 HOH HOH A . N 8 HOH 123 341 341 HOH HOH A . N 8 HOH 124 350 350 HOH HOH A . N 8 HOH 125 352 352 HOH HOH A . N 8 HOH 126 356 356 HOH HOH A . N 8 HOH 127 361 361 HOH HOH A . O 8 HOH 1 172 3 HOH HOH B . O 8 HOH 2 173 6 HOH HOH B . O 8 HOH 3 174 174 HOH HOH B . O 8 HOH 4 175 8 HOH HOH B . O 8 HOH 5 176 176 HOH HOH B . O 8 HOH 6 177 177 HOH HOH B . O 8 HOH 7 178 9 HOH HOH B . O 8 HOH 8 179 12 HOH HOH B . O 8 HOH 9 180 14 HOH HOH B . O 8 HOH 10 181 15 HOH HOH B . O 8 HOH 11 182 16 HOH HOH B . O 8 HOH 12 183 19 HOH HOH B . O 8 HOH 13 184 25 HOH HOH B . O 8 HOH 14 185 185 HOH HOH B . O 8 HOH 15 186 186 HOH HOH B . O 8 HOH 16 187 27 HOH HOH B . O 8 HOH 17 188 29 HOH HOH B . O 8 HOH 18 189 30 HOH HOH B . O 8 HOH 19 190 190 HOH HOH B . O 8 HOH 20 191 33 HOH HOH B . O 8 HOH 21 192 192 HOH HOH B . O 8 HOH 22 193 34 HOH HOH B . O 8 HOH 23 194 36 HOH HOH B . O 8 HOH 24 195 40 HOH HOH B . O 8 HOH 25 196 41 HOH HOH B . O 8 HOH 26 197 48 HOH HOH B . O 8 HOH 27 198 198 HOH HOH B . O 8 HOH 28 199 199 HOH HOH B . O 8 HOH 29 200 49 HOH HOH B . O 8 HOH 30 201 201 HOH HOH B . O 8 HOH 31 202 50 HOH HOH B . O 8 HOH 32 203 56 HOH HOH B . O 8 HOH 33 204 58 HOH HOH B . O 8 HOH 34 205 205 HOH HOH B . O 8 HOH 35 206 60 HOH HOH B . O 8 HOH 36 207 207 HOH HOH B . O 8 HOH 37 208 65 HOH HOH B . O 8 HOH 38 209 70 HOH HOH B . O 8 HOH 39 210 73 HOH HOH B . O 8 HOH 40 211 75 HOH HOH B . O 8 HOH 41 212 76 HOH HOH B . O 8 HOH 42 213 81 HOH HOH B . O 8 HOH 43 214 214 HOH HOH B . O 8 HOH 44 215 87 HOH HOH B . O 8 HOH 45 216 88 HOH HOH B . O 8 HOH 46 217 91 HOH HOH B . O 8 HOH 47 218 96 HOH HOH B . O 8 HOH 48 219 98 HOH HOH B . O 8 HOH 49 220 99 HOH HOH B . O 8 HOH 50 221 101 HOH HOH B . O 8 HOH 51 222 102 HOH HOH B . O 8 HOH 52 223 223 HOH HOH B . O 8 HOH 53 224 104 HOH HOH B . O 8 HOH 54 225 225 HOH HOH B . O 8 HOH 55 226 226 HOH HOH B . O 8 HOH 56 227 106 HOH HOH B . O 8 HOH 57 228 111 HOH HOH B . O 8 HOH 58 229 112 HOH HOH B . O 8 HOH 59 230 122 HOH HOH B . O 8 HOH 60 231 124 HOH HOH B . O 8 HOH 61 232 232 HOH HOH B . O 8 HOH 62 233 126 HOH HOH B . O 8 HOH 63 234 128 HOH HOH B . O 8 HOH 64 235 235 HOH HOH B . O 8 HOH 65 236 236 HOH HOH B . O 8 HOH 66 237 237 HOH HOH B . O 8 HOH 67 238 131 HOH HOH B . O 8 HOH 68 239 133 HOH HOH B . O 8 HOH 69 240 240 HOH HOH B . O 8 HOH 70 241 241 HOH HOH B . O 8 HOH 71 242 134 HOH HOH B . O 8 HOH 72 243 135 HOH HOH B . O 8 HOH 73 244 136 HOH HOH B . O 8 HOH 74 245 137 HOH HOH B . O 8 HOH 75 246 139 HOH HOH B . O 8 HOH 76 247 141 HOH HOH B . O 8 HOH 77 248 142 HOH HOH B . O 8 HOH 78 249 249 HOH HOH B . O 8 HOH 79 250 143 HOH HOH B . O 8 HOH 80 251 145 HOH HOH B . O 8 HOH 81 252 147 HOH HOH B . O 8 HOH 82 253 149 HOH HOH B . O 8 HOH 83 254 152 HOH HOH B . O 8 HOH 84 255 160 HOH HOH B . O 8 HOH 85 256 162 HOH HOH B . O 8 HOH 86 257 257 HOH HOH B . O 8 HOH 87 258 164 HOH HOH B . O 8 HOH 88 259 259 HOH HOH B . O 8 HOH 89 260 165 HOH HOH B . O 8 HOH 90 261 169 HOH HOH B . O 8 HOH 91 263 263 HOH HOH B . O 8 HOH 92 265 265 HOH HOH B . O 8 HOH 93 267 267 HOH HOH B . O 8 HOH 94 268 268 HOH HOH B . O 8 HOH 95 271 271 HOH HOH B . O 8 HOH 96 272 272 HOH HOH B . O 8 HOH 97 273 273 HOH HOH B . O 8 HOH 98 277 277 HOH HOH B . O 8 HOH 99 278 278 HOH HOH B . O 8 HOH 100 280 280 HOH HOH B . O 8 HOH 101 283 283 HOH HOH B . O 8 HOH 102 284 284 HOH HOH B . O 8 HOH 103 286 286 HOH HOH B . O 8 HOH 104 297 297 HOH HOH B . O 8 HOH 105 299 299 HOH HOH B . O 8 HOH 106 302 302 HOH HOH B . O 8 HOH 107 303 303 HOH HOH B . O 8 HOH 108 314 314 HOH HOH B . O 8 HOH 109 315 315 HOH HOH B . O 8 HOH 110 327 327 HOH HOH B . O 8 HOH 111 329 329 HOH HOH B . O 8 HOH 112 336 336 HOH HOH B . O 8 HOH 113 339 339 HOH HOH B . O 8 HOH 114 342 342 HOH HOH B . O 8 HOH 115 346 346 HOH HOH B . O 8 HOH 116 347 347 HOH HOH B . O 8 HOH 117 351 351 HOH HOH B . O 8 HOH 118 355 355 HOH HOH B . O 8 HOH 119 369 369 HOH HOH B . O 8 HOH 120 393 393 HOH HOH B . P 8 HOH 1 1 1 HOH HOH C . P 8 HOH 2 2 2 HOH HOH C . P 8 HOH 3 10 10 HOH HOH C . P 8 HOH 4 13 13 HOH HOH C . P 8 HOH 5 18 18 HOH HOH C . P 8 HOH 6 24 24 HOH HOH C . P 8 HOH 7 28 28 HOH HOH C . P 8 HOH 8 67 67 HOH HOH C . P 8 HOH 9 68 68 HOH HOH C . P 8 HOH 10 69 69 HOH HOH C . P 8 HOH 11 77 77 HOH HOH C . P 8 HOH 12 85 85 HOH HOH C . P 8 HOH 13 86 86 HOH HOH C . P 8 HOH 14 92 92 HOH HOH C . P 8 HOH 15 108 108 HOH HOH C . P 8 HOH 16 115 115 HOH HOH C . P 8 HOH 17 151 151 HOH HOH C . P 8 HOH 18 166 166 HOH HOH C . P 8 HOH 19 171 171 HOH HOH C . P 8 HOH 20 228 228 HOH HOH C . P 8 HOH 21 298 298 HOH HOH C . P 8 HOH 22 353 353 HOH HOH C . P 8 HOH 23 358 358 HOH HOH C . Q 8 HOH 1 53 53 HOH HOH D . Q 8 HOH 2 78 78 HOH HOH D . Q 8 HOH 3 113 113 HOH HOH D . Q 8 HOH 4 157 157 HOH HOH D . Q 8 HOH 5 163 163 HOH HOH D . Q 8 HOH 6 167 167 HOH HOH D . Q 8 HOH 7 173 173 HOH HOH D . Q 8 HOH 8 247 247 HOH HOH D . Q 8 HOH 9 255 255 HOH HOH D . Q 8 HOH 10 323 323 HOH HOH D . R 8 HOH 1 6 4 HOH HOH E . R 8 HOH 2 26 26 HOH HOH E . R 8 HOH 3 42 42 HOH HOH E . R 8 HOH 4 63 63 HOH HOH E . R 8 HOH 5 154 154 HOH HOH E . R 8 HOH 6 159 159 HOH HOH E . R 8 HOH 7 182 182 HOH HOH E . R 8 HOH 8 183 183 HOH HOH E . R 8 HOH 9 216 216 HOH HOH E . R 8 HOH 10 227 227 HOH HOH E . R 8 HOH 11 250 250 HOH HOH E . R 8 HOH 12 270 270 HOH HOH E . R 8 HOH 13 294 294 HOH HOH E . R 8 HOH 14 343 343 HOH HOH E . R 8 HOH 15 344 344 HOH HOH E . S 8 HOH 1 5 5 HOH HOH F . S 8 HOH 2 22 22 HOH HOH F . S 8 HOH 3 31 31 HOH HOH F . S 8 HOH 4 39 39 HOH HOH F . S 8 HOH 5 44 44 HOH HOH F . S 8 HOH 6 52 52 HOH HOH F . S 8 HOH 7 59 59 HOH HOH F . S 8 HOH 8 109 109 HOH HOH F . S 8 HOH 9 117 117 HOH HOH F . S 8 HOH 10 118 118 HOH HOH F . S 8 HOH 11 178 178 HOH HOH F . S 8 HOH 12 194 194 HOH HOH F . S 8 HOH 13 266 266 HOH HOH F . S 8 HOH 14 293 293 HOH HOH F . S 8 HOH 15 334 334 HOH HOH F . S 8 HOH 16 349 349 HOH HOH F . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 66 A MSE 56 ? MET SELENOMETHIONINE 2 B MSE 66 B MSE 56 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11740 ? 1 MORE -139 ? 1 'SSA (A^2)' 16230 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 222 ? O HOH . 2 1 B HOH 260 ? O HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-09-06 5 'Structure model' 1 4 2023-12-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 9 5 'Structure model' '_chem_comp_atom.atom_id' 10 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 0.1730 15.7170 83.1890 -0.0679 0.0188 -0.0433 -0.0033 -0.0055 -0.0041 1.0449 0.8138 1.3520 0.0039 0.4825 0.0305 0.0107 -0.0147 -0.0078 -0.0016 0.0134 0.0248 0.0731 0.0294 -0.0241 'X-RAY DIFFRACTION' 2 ? refined -0.3750 11.9790 98.7660 -0.0973 0.0532 -0.0558 -0.0059 -0.0156 0.0128 1.0129 0.8648 1.7726 -0.2085 0.4526 -0.2341 0.0317 -0.2067 -0.0470 -0.0148 0.0839 0.0921 0.1240 -0.1568 -0.1156 'X-RAY DIFFRACTION' 3 ? refined 0.5690 11.0060 67.8270 -0.0901 0.0464 -0.0652 0.0056 -0.0302 -0.0220 1.0443 0.8621 1.6468 0.0601 0.4530 0.4661 0.0602 0.1867 -0.0426 0.0343 0.0523 -0.0239 0.0997 0.1467 -0.1126 'X-RAY DIFFRACTION' 4 ? refined -0.2890 -7.7250 83.8890 0.2733 -0.1516 0.0359 -0.0139 -0.1656 0.0201 2.8549 2.0291 7.0090 -0.4284 0.0382 0.9342 0.1069 -0.0272 -0.6238 0.0900 0.1799 0.1034 1.3767 -0.0146 -0.2868 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 C -4 ? ? C 0 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 D -4 ? ? D 0 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 E 1 ? ? E 4 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 F 1 ? ? F 4 ? ? ? ? 'X-RAY DIFFRACTION' 5 2 A -9 ? ? A 127 ? ? ? ? 'X-RAY DIFFRACTION' 6 2 B 143 ? ? B 170 ? ? ? ? 'X-RAY DIFFRACTION' 7 3 B -9 ? ? B 127 ? ? ? ? 'X-RAY DIFFRACTION' 8 3 A 143 ? ? A 170 ? ? ? ? 'X-RAY DIFFRACTION' 9 4 A 128 ? ? A 142 ? ? ? ? 'X-RAY DIFFRACTION' 10 4 B 128 ? ? B 142 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 ARP/wARP 'model building' . ? 2 REFMAC refinement 5.2.0019 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOLOGICAL UNIT CONTAINS PROTEIN CHAINS A AND B, DNA STRANDS C/E (DNA STRAND T CLEAVED) AND DNA STRANDS D/E (DNA STRAND A CLEAVED). THE HEXAMER (ACCORDING TO THE PDB CONVENTIONS) IS A COMPLEX OF THE DIMERIC RESTRICTION ENZYME WITH ITS PRODUCTS, TWO DOUBLE STRANDED DNA FRAGMENTS. THE NATURAL PROTEIN OLIGOMERIZATION STATE IS A DIMER - THE DNA IS A PRODUCT. UNDER THE PHYSIOLOGICAL CONDITIONS THE PROTEIN DIMER BINDS DOUBLE STRANDED DNA AND CLEAVES IT TO TWO DOUBLE STRANDED DNA FRAGMENTS. ; # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P E DG 1 ? A OP3 E DG 1 ? A 1.516 1.607 -0.091 0.012 N 2 1 P E DG 1 ? B OP3 E DG 1 ? B 1.510 1.607 -0.097 0.012 N 3 1 P F DG 1 ? A OP3 F DG 1 ? A 1.512 1.607 -0.095 0.012 N 4 1 P F DG 1 ? B OP3 F DG 1 ? B 1.508 1.607 -0.099 0.012 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 161 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 81.87 _pdbx_validate_torsion.psi 10.58 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT C -2 ? A 0.080 'SIDE CHAIN' 2 1 DT D -2 ? A 0.074 'SIDE CHAIN' 3 1 DG E 1 ? A 0.061 'SIDE CHAIN' 4 1 DG F 1 ? A 0.056 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -9 ? A MET 1 2 1 Y 1 A GLY -8 ? A GLY 2 3 1 Y 1 A HIS -7 ? A HIS 3 4 1 Y 1 A HIS -6 ? A HIS 4 5 1 Y 1 A HIS -5 ? A HIS 5 6 1 Y 1 A HIS -4 ? A HIS 6 7 1 Y 1 A HIS -3 ? A HIS 7 8 1 Y 1 B MET -9 ? B MET 1 9 1 Y 1 B GLY -8 ? B GLY 2 10 1 Y 1 B HIS -7 ? B HIS 3 11 1 Y 1 B HIS -6 ? B HIS 4 12 1 Y 1 B HIS -5 ? B HIS 5 13 1 Y 1 B HIS -4 ? B HIS 6 14 1 Y 1 B HIS -3 ? B HIS 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CL CL CL N N 75 CYS N N N N 76 CYS CA C N R 77 CYS C C N N 78 CYS O O N N 79 CYS CB C N N 80 CYS SG S N N 81 CYS OXT O N N 82 CYS H H N N 83 CYS H2 H N N 84 CYS HA H N N 85 CYS HB2 H N N 86 CYS HB3 H N N 87 CYS HG H N N 88 CYS HXT H N N 89 DA OP3 O N N 90 DA P P N N 91 DA OP1 O N N 92 DA OP2 O N N 93 DA "O5'" O N N 94 DA "C5'" C N N 95 DA "C4'" C N R 96 DA "O4'" O N N 97 DA "C3'" C N S 98 DA "O3'" O N N 99 DA "C2'" C N N 100 DA "C1'" C N R 101 DA N9 N Y N 102 DA C8 C Y N 103 DA N7 N Y N 104 DA C5 C Y N 105 DA C6 C Y N 106 DA N6 N N N 107 DA N1 N Y N 108 DA C2 C Y N 109 DA N3 N Y N 110 DA C4 C Y N 111 DA HOP3 H N N 112 DA HOP2 H N N 113 DA "H5'" H N N 114 DA "H5''" H N N 115 DA "H4'" H N N 116 DA "H3'" H N N 117 DA "HO3'" H N N 118 DA "H2'" H N N 119 DA "H2''" H N N 120 DA "H1'" H N N 121 DA H8 H N N 122 DA H61 H N N 123 DA H62 H N N 124 DA H2 H N N 125 DC OP3 O N N 126 DC P P N N 127 DC OP1 O N N 128 DC OP2 O N N 129 DC "O5'" O N N 130 DC "C5'" C N N 131 DC "C4'" C N R 132 DC "O4'" O N N 133 DC "C3'" C N S 134 DC "O3'" O N N 135 DC "C2'" C N N 136 DC "C1'" C N R 137 DC N1 N N N 138 DC C2 C N N 139 DC O2 O N N 140 DC N3 N N N 141 DC C4 C N N 142 DC N4 N N N 143 DC C5 C N N 144 DC C6 C N N 145 DC HOP3 H N N 146 DC HOP2 H N N 147 DC "H5'" H N N 148 DC "H5''" H N N 149 DC "H4'" H N N 150 DC "H3'" H N N 151 DC "HO3'" H N N 152 DC "H2'" H N N 153 DC "H2''" H N N 154 DC "H1'" H N N 155 DC H41 H N N 156 DC H42 H N N 157 DC H5 H N N 158 DC H6 H N N 159 DG OP3 O N N 160 DG P P N N 161 DG OP1 O N N 162 DG OP2 O N N 163 DG "O5'" O N N 164 DG "C5'" C N N 165 DG "C4'" C N R 166 DG "O4'" O N N 167 DG "C3'" C N S 168 DG "O3'" O N N 169 DG "C2'" C N N 170 DG "C1'" C N R 171 DG N9 N Y N 172 DG C8 C Y N 173 DG N7 N Y N 174 DG C5 C Y N 175 DG C6 C N N 176 DG O6 O N N 177 DG N1 N N N 178 DG C2 C N N 179 DG N2 N N N 180 DG N3 N N N 181 DG C4 C Y N 182 DG HOP3 H N N 183 DG HOP2 H N N 184 DG "H5'" H N N 185 DG "H5''" H N N 186 DG "H4'" H N N 187 DG "H3'" H N N 188 DG "HO3'" H N N 189 DG "H2'" H N N 190 DG "H2''" H N N 191 DG "H1'" H N N 192 DG H8 H N N 193 DG H1 H N N 194 DG H21 H N N 195 DG H22 H N N 196 DT OP3 O N N 197 DT P P N N 198 DT OP1 O N N 199 DT OP2 O N N 200 DT "O5'" O N N 201 DT "C5'" C N N 202 DT "C4'" C N R 203 DT "O4'" O N N 204 DT "C3'" C N S 205 DT "O3'" O N N 206 DT "C2'" C N N 207 DT "C1'" C N R 208 DT N1 N N N 209 DT C2 C N N 210 DT O2 O N N 211 DT N3 N N N 212 DT C4 C N N 213 DT O4 O N N 214 DT C5 C N N 215 DT C7 C N N 216 DT C6 C N N 217 DT HOP3 H N N 218 DT HOP2 H N N 219 DT "H5'" H N N 220 DT "H5''" H N N 221 DT "H4'" H N N 222 DT "H3'" H N N 223 DT "HO3'" H N N 224 DT "H2'" H N N 225 DT "H2''" H N N 226 DT "H1'" H N N 227 DT H3 H N N 228 DT H71 H N N 229 DT H72 H N N 230 DT H73 H N N 231 DT H6 H N N 232 GLN N N N N 233 GLN CA C N S 234 GLN C C N N 235 GLN O O N N 236 GLN CB C N N 237 GLN CG C N N 238 GLN CD C N N 239 GLN OE1 O N N 240 GLN NE2 N N N 241 GLN OXT O N N 242 GLN H H N N 243 GLN H2 H N N 244 GLN HA H N N 245 GLN HB2 H N N 246 GLN HB3 H N N 247 GLN HG2 H N N 248 GLN HG3 H N N 249 GLN HE21 H N N 250 GLN HE22 H N N 251 GLN HXT H N N 252 GLU N N N N 253 GLU CA C N S 254 GLU C C N N 255 GLU O O N N 256 GLU CB C N N 257 GLU CG C N N 258 GLU CD C N N 259 GLU OE1 O N N 260 GLU OE2 O N N 261 GLU OXT O N N 262 GLU H H N N 263 GLU H2 H N N 264 GLU HA H N N 265 GLU HB2 H N N 266 GLU HB3 H N N 267 GLU HG2 H N N 268 GLU HG3 H N N 269 GLU HE2 H N N 270 GLU HXT H N N 271 GLY N N N N 272 GLY CA C N N 273 GLY C C N N 274 GLY O O N N 275 GLY OXT O N N 276 GLY H H N N 277 GLY H2 H N N 278 GLY HA2 H N N 279 GLY HA3 H N N 280 GLY HXT H N N 281 HIS N N N N 282 HIS CA C N S 283 HIS C C N N 284 HIS O O N N 285 HIS CB C N N 286 HIS CG C Y N 287 HIS ND1 N Y N 288 HIS CD2 C Y N 289 HIS CE1 C Y N 290 HIS NE2 N Y N 291 HIS OXT O N N 292 HIS H H N N 293 HIS H2 H N N 294 HIS HA H N N 295 HIS HB2 H N N 296 HIS HB3 H N N 297 HIS HD1 H N N 298 HIS HD2 H N N 299 HIS HE1 H N N 300 HIS HE2 H N N 301 HIS HXT H N N 302 HOH O O N N 303 HOH H1 H N N 304 HOH H2 H N N 305 ILE N N N N 306 ILE CA C N S 307 ILE C C N N 308 ILE O O N N 309 ILE CB C N S 310 ILE CG1 C N N 311 ILE CG2 C N N 312 ILE CD1 C N N 313 ILE OXT O N N 314 ILE H H N N 315 ILE H2 H N N 316 ILE HA H N N 317 ILE HB H N N 318 ILE HG12 H N N 319 ILE HG13 H N N 320 ILE HG21 H N N 321 ILE HG22 H N N 322 ILE HG23 H N N 323 ILE HD11 H N N 324 ILE HD12 H N N 325 ILE HD13 H N N 326 ILE HXT H N N 327 LEU N N N N 328 LEU CA C N S 329 LEU C C N N 330 LEU O O N N 331 LEU CB C N N 332 LEU CG C N N 333 LEU CD1 C N N 334 LEU CD2 C N N 335 LEU OXT O N N 336 LEU H H N N 337 LEU H2 H N N 338 LEU HA H N N 339 LEU HB2 H N N 340 LEU HB3 H N N 341 LEU HG H N N 342 LEU HD11 H N N 343 LEU HD12 H N N 344 LEU HD13 H N N 345 LEU HD21 H N N 346 LEU HD22 H N N 347 LEU HD23 H N N 348 LEU HXT H N N 349 LYS N N N N 350 LYS CA C N S 351 LYS C C N N 352 LYS O O N N 353 LYS CB C N N 354 LYS CG C N N 355 LYS CD C N N 356 LYS CE C N N 357 LYS NZ N N N 358 LYS OXT O N N 359 LYS H H N N 360 LYS H2 H N N 361 LYS HA H N N 362 LYS HB2 H N N 363 LYS HB3 H N N 364 LYS HG2 H N N 365 LYS HG3 H N N 366 LYS HD2 H N N 367 LYS HD3 H N N 368 LYS HE2 H N N 369 LYS HE3 H N N 370 LYS HZ1 H N N 371 LYS HZ2 H N N 372 LYS HZ3 H N N 373 LYS HXT H N N 374 MET N N N N 375 MET CA C N S 376 MET C C N N 377 MET O O N N 378 MET CB C N N 379 MET CG C N N 380 MET SD S N N 381 MET CE C N N 382 MET OXT O N N 383 MET H H N N 384 MET H2 H N N 385 MET HA H N N 386 MET HB2 H N N 387 MET HB3 H N N 388 MET HG2 H N N 389 MET HG3 H N N 390 MET HE1 H N N 391 MET HE2 H N N 392 MET HE3 H N N 393 MET HXT H N N 394 MSE N N N N 395 MSE CA C N S 396 MSE C C N N 397 MSE O O N N 398 MSE OXT O N N 399 MSE CB C N N 400 MSE CG C N N 401 MSE SE SE N N 402 MSE CE C N N 403 MSE H H N N 404 MSE H2 H N N 405 MSE HA H N N 406 MSE HXT H N N 407 MSE HB2 H N N 408 MSE HB3 H N N 409 MSE HG2 H N N 410 MSE HG3 H N N 411 MSE HE1 H N N 412 MSE HE2 H N N 413 MSE HE3 H N N 414 PHE N N N N 415 PHE CA C N S 416 PHE C C N N 417 PHE O O N N 418 PHE CB C N N 419 PHE CG C Y N 420 PHE CD1 C Y N 421 PHE CD2 C Y N 422 PHE CE1 C Y N 423 PHE CE2 C Y N 424 PHE CZ C Y N 425 PHE OXT O N N 426 PHE H H N N 427 PHE H2 H N N 428 PHE HA H N N 429 PHE HB2 H N N 430 PHE HB3 H N N 431 PHE HD1 H N N 432 PHE HD2 H N N 433 PHE HE1 H N N 434 PHE HE2 H N N 435 PHE HZ H N N 436 PHE HXT H N N 437 PRO N N N N 438 PRO CA C N S 439 PRO C C N N 440 PRO O O N N 441 PRO CB C N N 442 PRO CG C N N 443 PRO CD C N N 444 PRO OXT O N N 445 PRO H H N N 446 PRO HA H N N 447 PRO HB2 H N N 448 PRO HB3 H N N 449 PRO HG2 H N N 450 PRO HG3 H N N 451 PRO HD2 H N N 452 PRO HD3 H N N 453 PRO HXT H N N 454 SER N N N N 455 SER CA C N S 456 SER C C N N 457 SER O O N N 458 SER CB C N N 459 SER OG O N N 460 SER OXT O N N 461 SER H H N N 462 SER H2 H N N 463 SER HA H N N 464 SER HB2 H N N 465 SER HB3 H N N 466 SER HG H N N 467 SER HXT H N N 468 THR N N N N 469 THR CA C N S 470 THR C C N N 471 THR O O N N 472 THR CB C N R 473 THR OG1 O N N 474 THR CG2 C N N 475 THR OXT O N N 476 THR H H N N 477 THR H2 H N N 478 THR HA H N N 479 THR HB H N N 480 THR HG1 H N N 481 THR HG21 H N N 482 THR HG22 H N N 483 THR HG23 H N N 484 THR HXT H N N 485 TYR N N N N 486 TYR CA C N S 487 TYR C C N N 488 TYR O O N N 489 TYR CB C N N 490 TYR CG C Y N 491 TYR CD1 C Y N 492 TYR CD2 C Y N 493 TYR CE1 C Y N 494 TYR CE2 C Y N 495 TYR CZ C Y N 496 TYR OH O N N 497 TYR OXT O N N 498 TYR H H N N 499 TYR H2 H N N 500 TYR HA H N N 501 TYR HB2 H N N 502 TYR HB3 H N N 503 TYR HD1 H N N 504 TYR HD2 H N N 505 TYR HE1 H N N 506 TYR HE2 H N N 507 TYR HH H N N 508 TYR HXT H N N 509 VAL N N N N 510 VAL CA C N S 511 VAL C C N N 512 VAL O O N N 513 VAL CB C N N 514 VAL CG1 C N N 515 VAL CG2 C N N 516 VAL OXT O N N 517 VAL H H N N 518 VAL H2 H N N 519 VAL HA H N N 520 VAL HB H N N 521 VAL HG11 H N N 522 VAL HG12 H N N 523 VAL HG13 H N N 524 VAL HG21 H N N 525 VAL HG22 H N N 526 VAL HG23 H N N 527 VAL HXT H N N 528 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 MSE N CA sing N N 386 MSE N H sing N N 387 MSE N H2 sing N N 388 MSE CA C sing N N 389 MSE CA CB sing N N 390 MSE CA HA sing N N 391 MSE C O doub N N 392 MSE C OXT sing N N 393 MSE OXT HXT sing N N 394 MSE CB CG sing N N 395 MSE CB HB2 sing N N 396 MSE CB HB3 sing N N 397 MSE CG SE sing N N 398 MSE CG HG2 sing N N 399 MSE CG HG3 sing N N 400 MSE SE CE sing N N 401 MSE CE HE1 sing N N 402 MSE CE HE2 sing N N 403 MSE CE HE3 sing N N 404 PHE N CA sing N N 405 PHE N H sing N N 406 PHE N H2 sing N N 407 PHE CA C sing N N 408 PHE CA CB sing N N 409 PHE CA HA sing N N 410 PHE C O doub N N 411 PHE C OXT sing N N 412 PHE CB CG sing N N 413 PHE CB HB2 sing N N 414 PHE CB HB3 sing N N 415 PHE CG CD1 doub Y N 416 PHE CG CD2 sing Y N 417 PHE CD1 CE1 sing Y N 418 PHE CD1 HD1 sing N N 419 PHE CD2 CE2 doub Y N 420 PHE CD2 HD2 sing N N 421 PHE CE1 CZ doub Y N 422 PHE CE1 HE1 sing N N 423 PHE CE2 CZ sing Y N 424 PHE CE2 HE2 sing N N 425 PHE CZ HZ sing N N 426 PHE OXT HXT sing N N 427 PRO N CA sing N N 428 PRO N CD sing N N 429 PRO N H sing N N 430 PRO CA C sing N N 431 PRO CA CB sing N N 432 PRO CA HA sing N N 433 PRO C O doub N N 434 PRO C OXT sing N N 435 PRO CB CG sing N N 436 PRO CB HB2 sing N N 437 PRO CB HB3 sing N N 438 PRO CG CD sing N N 439 PRO CG HG2 sing N N 440 PRO CG HG3 sing N N 441 PRO CD HD2 sing N N 442 PRO CD HD3 sing N N 443 PRO OXT HXT sing N N 444 SER N CA sing N N 445 SER N H sing N N 446 SER N H2 sing N N 447 SER CA C sing N N 448 SER CA CB sing N N 449 SER CA HA sing N N 450 SER C O doub N N 451 SER C OXT sing N N 452 SER CB OG sing N N 453 SER CB HB2 sing N N 454 SER CB HB3 sing N N 455 SER OG HG sing N N 456 SER OXT HXT sing N N 457 THR N CA sing N N 458 THR N H sing N N 459 THR N H2 sing N N 460 THR CA C sing N N 461 THR CA CB sing N N 462 THR CA HA sing N N 463 THR C O doub N N 464 THR C OXT sing N N 465 THR CB OG1 sing N N 466 THR CB CG2 sing N N 467 THR CB HB sing N N 468 THR OG1 HG1 sing N N 469 THR CG2 HG21 sing N N 470 THR CG2 HG22 sing N N 471 THR CG2 HG23 sing N N 472 THR OXT HXT sing N N 473 TYR N CA sing N N 474 TYR N H sing N N 475 TYR N H2 sing N N 476 TYR CA C sing N N 477 TYR CA CB sing N N 478 TYR CA HA sing N N 479 TYR C O doub N N 480 TYR C OXT sing N N 481 TYR CB CG sing N N 482 TYR CB HB2 sing N N 483 TYR CB HB3 sing N N 484 TYR CG CD1 doub Y N 485 TYR CG CD2 sing Y N 486 TYR CD1 CE1 sing Y N 487 TYR CD1 HD1 sing N N 488 TYR CD2 CE2 doub Y N 489 TYR CD2 HD2 sing N N 490 TYR CE1 CZ doub Y N 491 TYR CE1 HE1 sing N N 492 TYR CE2 CZ sing Y N 493 TYR CE2 HE2 sing N N 494 TYR CZ OH sing N N 495 TYR OH HH sing N N 496 TYR OXT HXT sing N N 497 VAL N CA sing N N 498 VAL N H sing N N 499 VAL N H2 sing N N 500 VAL CA C sing N N 501 VAL CA CB sing N N 502 VAL CA HA sing N N 503 VAL C O doub N N 504 VAL C OXT sing N N 505 VAL CB CG1 sing N N 506 VAL CB CG2 sing N N 507 VAL CB HB sing N N 508 VAL CG1 HG11 sing N N 509 VAL CG1 HG12 sing N N 510 VAL CG1 HG13 sing N N 511 VAL CG2 HG21 sing N N 512 VAL CG2 HG22 sing N N 513 VAL CG2 HG23 sing N N 514 VAL OXT HXT sing N N 515 # _ndb_struct_conf_na.entry_id 3OR3 _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 F DC 4 1_555 -0.311 -0.129 -0.489 -13.043 1.534 0.188 1 C_DG-4:DC4_F C -4 ? F 4 ? 19 1 1 C DA 2 1_555 F DT 3 1_555 -0.369 -0.225 -0.461 -1.456 12.433 -1.773 2 C_DA-3:DT3_F C -3 ? F 3 ? 20 1 1 C DT 3 1_555 F DA 2 1_555 0.229 -0.136 -0.127 2.741 -0.805 4.558 3 C_DT-2:DA2_F C -2 ? F 2 ? 20 1 1 C DC 4 1_555 F DG 1 1_555 0.114 -0.014 -0.329 4.184 -0.372 -1.922 4 C_DC-1:DG1_F C -1 ? F 1 ? 19 1 1 C DT 5 1_555 D DA 5 1_555 -0.195 -0.050 -0.194 -2.230 3.149 -1.188 5 C_DT0:DA0_D C 0 ? D 0 ? 20 1 1 E DG 1 1_555 D DC 4 1_555 -0.165 -0.057 -0.037 -2.932 -2.007 -1.250 6 E_DG1:DC-1_D E 1 ? D -1 ? 19 1 1 E DA 2 1_555 D DT 3 1_555 -0.270 -0.131 -0.097 -5.879 -6.703 0.244 7 E_DA2:DT-2_D E 2 ? D -2 ? 20 1 1 E DA 3 1_555 D DT 2 1_555 -0.019 -0.194 -0.721 2.062 8.355 1.643 8 E_DA3:DT-3_D E 3 ? D -3 ? 20 1 1 E DC 4 1_555 D DG 1 1_555 0.143 -0.467 -0.488 10.717 9.427 -3.368 9 E_DC4:DG-4_D E 4 ? D -4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 F DC 4 1_555 C DA 2 1_555 F DT 3 1_555 0.014 -1.169 3.200 0.297 1.655 27.888 -2.802 0.038 3.127 3.429 -0.615 27.937 1 CC_DG-4DA-3:DT3DC4_FF C -4 ? F 4 ? C -3 ? F 3 ? 1 C DA 2 1_555 F DT 3 1_555 C DT 3 1_555 F DA 2 1_555 -0.305 -1.227 3.947 0.437 -21.246 33.762 1.471 0.517 4.007 -32.857 -0.675 39.728 2 CC_DA-3DT-2:DA2DT3_FF C -3 ? F 3 ? C -2 ? F 2 ? 1 C DT 3 1_555 F DA 2 1_555 C DC 4 1_555 F DG 1 1_555 0.117 -0.844 3.466 -1.401 -9.574 40.720 -0.090 -0.324 3.561 -13.529 1.980 41.806 3 CC_DT-2DC-1:DG1DA2_FF C -2 ? F 2 ? C -1 ? F 1 ? 1 C DC 4 1_555 F DG 1 1_555 C DT 5 1_555 D DA 5 1_555 -0.612 -1.480 3.869 -5.678 -4.117 25.945 -1.874 -0.492 4.089 -8.962 12.362 26.861 4 CC_DC-1DT0:DA0DG1_DF C -1 ? F 1 ? C 0 ? D 0 ? 1 C DT 5 1_555 D DA 5 1_555 E DG 1 1_555 D DC 4 1_555 0.831 -1.271 3.689 5.187 -5.833 27.176 -0.987 -0.264 3.958 -12.100 -10.761 28.255 5 CE_DT0DG1:DC-1DA0_DD C 0 ? D 0 ? E 1 ? D -1 ? 1 E DG 1 1_555 D DC 4 1_555 E DA 2 1_555 D DT 3 1_555 -0.147 -0.908 3.492 3.883 -6.729 40.758 -0.501 0.658 3.563 -9.556 -5.515 41.461 6 EE_DG1DA2:DT-2DC-1_DD E 1 ? D -1 ? E 2 ? D -2 ? 1 E DA 2 1_555 D DT 3 1_555 E DA 3 1_555 D DT 2 1_555 0.541 -0.874 4.011 1.257 -22.293 32.647 2.202 -0.605 3.844 -35.020 -1.975 39.380 7 EE_DA2DA3:DT-3DT-2_DD E 2 ? D -2 ? E 3 ? D -3 ? 1 E DA 3 1_555 D DT 2 1_555 E DC 4 1_555 D DG 1 1_555 0.086 -1.437 3.335 -1.420 0.753 30.876 -2.843 -0.439 3.292 1.412 2.665 30.917 8 EE_DA3DC4:DG-4DT-3_DD E 3 ? D -3 ? E 4 ? D -4 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 6 'CALCIUM ION' CA 7 'CHLORIDE ION' CL 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3OQG _pdbx_initial_refinement_model.details ? #