data_3ORM # _entry.id 3ORM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ORM pdb_00003orm 10.2210/pdb3orm/pdb RCSB RCSB061485 ? ? WWPDB D_1000061485 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3ORM . unspecified PDB 3ORO . unspecified PDB 3ORP . unspecified PDB 3ORT . unspecified PDB 1mru Wild-type unspecified PDB 1o6y Wild-type unspecified PDB 3ori 'L33D mutant' unspecified PDB 3ork 'L33D mutant' unspecified PDB 3orl 'L33D mutant' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ORM _pdbx_database_status.recvd_initial_deposition_date 2010-09-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Echols, N.' 1 'Lombana, T.N.' 2 'Alber, T.' 3 'TB Structural Genomics Consortium (TBSGC)' 4 # _citation.id primary _citation.title 'Allosteric activation mechanism of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknB.' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 1667 _citation.page_last 1677 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21134645 _citation.pdbx_database_id_DOI 10.1016/j.str.2010.09.019 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lombana, T.N.' 1 ? primary 'Echols, N.' 2 ? primary 'Good, M.C.' 3 ? primary 'Thomsen, N.D.' 4 ? primary 'Ng, H.L.' 5 ? primary 'Greenstein, A.E.' 6 ? primary 'Falick, A.M.' 7 ? primary 'King, D.S.' 8 ? primary 'Alber, T.' 9 ? # _cell.entry_id 3ORM _cell.length_a 40.458 _cell.length_b 51.076 _cell.length_c 134.746 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3ORM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine/threonine protein kinase' 33474.664 1 ? D76A 'Kinase domain (UNP residues 1 to 308)' ? 2 non-polymer syn 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' 523.247 1 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYAT GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYAT GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 THR n 1 7 PRO n 1 8 SER n 1 9 HIS n 1 10 LEU n 1 11 SER n 1 12 ASP n 1 13 ARG n 1 14 TYR n 1 15 GLU n 1 16 LEU n 1 17 GLY n 1 18 GLU n 1 19 ILE n 1 20 LEU n 1 21 GLY n 1 22 PHE n 1 23 GLY n 1 24 GLY n 1 25 MET n 1 26 SER n 1 27 GLU n 1 28 VAL n 1 29 HIS n 1 30 LEU n 1 31 ALA n 1 32 ARG n 1 33 ASP n 1 34 LEU n 1 35 ARG n 1 36 LEU n 1 37 HIS n 1 38 ARG n 1 39 ASP n 1 40 VAL n 1 41 ALA n 1 42 VAL n 1 43 LYS n 1 44 VAL n 1 45 LEU n 1 46 ARG n 1 47 ALA n 1 48 ASP n 1 49 LEU n 1 50 ALA n 1 51 ARG n 1 52 ASP n 1 53 PRO n 1 54 SER n 1 55 PHE n 1 56 TYR n 1 57 LEU n 1 58 ARG n 1 59 PHE n 1 60 ARG n 1 61 ARG n 1 62 GLU n 1 63 ALA n 1 64 GLN n 1 65 ASN n 1 66 ALA n 1 67 ALA n 1 68 ALA n 1 69 LEU n 1 70 ASN n 1 71 HIS n 1 72 PRO n 1 73 ALA n 1 74 ILE n 1 75 VAL n 1 76 ALA n 1 77 VAL n 1 78 TYR n 1 79 ALA n 1 80 THR n 1 81 GLY n 1 82 GLU n 1 83 ALA n 1 84 GLU n 1 85 THR n 1 86 PRO n 1 87 ALA n 1 88 GLY n 1 89 PRO n 1 90 LEU n 1 91 PRO n 1 92 TYR n 1 93 ILE n 1 94 VAL n 1 95 MET n 1 96 GLU n 1 97 TYR n 1 98 VAL n 1 99 ASP n 1 100 GLY n 1 101 VAL n 1 102 THR n 1 103 LEU n 1 104 ARG n 1 105 ASP n 1 106 ILE n 1 107 VAL n 1 108 HIS n 1 109 THR n 1 110 GLU n 1 111 GLY n 1 112 PRO n 1 113 MET n 1 114 THR n 1 115 PRO n 1 116 LYS n 1 117 ARG n 1 118 ALA n 1 119 ILE n 1 120 GLU n 1 121 VAL n 1 122 ILE n 1 123 ALA n 1 124 ASP n 1 125 ALA n 1 126 CYS n 1 127 GLN n 1 128 ALA n 1 129 LEU n 1 130 ASN n 1 131 PHE n 1 132 SER n 1 133 HIS n 1 134 GLN n 1 135 ASN n 1 136 GLY n 1 137 ILE n 1 138 ILE n 1 139 HIS n 1 140 ARG n 1 141 ASP n 1 142 VAL n 1 143 LYS n 1 144 PRO n 1 145 ALA n 1 146 ASN n 1 147 ILE n 1 148 MET n 1 149 ILE n 1 150 SER n 1 151 ALA n 1 152 THR n 1 153 ASN n 1 154 ALA n 1 155 VAL n 1 156 LYS n 1 157 VAL n 1 158 MET n 1 159 ASP n 1 160 PHE n 1 161 GLY n 1 162 ILE n 1 163 ALA n 1 164 ARG n 1 165 ALA n 1 166 ILE n 1 167 ALA n 1 168 ASP n 1 169 SER n 1 170 GLY n 1 171 ASN n 1 172 SER n 1 173 VAL n 1 174 THR n 1 175 GLN n 1 176 THR n 1 177 ALA n 1 178 ALA n 1 179 VAL n 1 180 ILE n 1 181 GLY n 1 182 THR n 1 183 ALA n 1 184 GLN n 1 185 TYR n 1 186 LEU n 1 187 SER n 1 188 PRO n 1 189 GLU n 1 190 GLN n 1 191 ALA n 1 192 ARG n 1 193 GLY n 1 194 ASP n 1 195 SER n 1 196 VAL n 1 197 ASP n 1 198 ALA n 1 199 ARG n 1 200 SER n 1 201 ASP n 1 202 VAL n 1 203 TYR n 1 204 SER n 1 205 LEU n 1 206 GLY n 1 207 CYS n 1 208 VAL n 1 209 LEU n 1 210 TYR n 1 211 GLU n 1 212 VAL n 1 213 LEU n 1 214 THR n 1 215 GLY n 1 216 GLU n 1 217 PRO n 1 218 PRO n 1 219 PHE n 1 220 THR n 1 221 GLY n 1 222 ASP n 1 223 SER n 1 224 PRO n 1 225 VAL n 1 226 SER n 1 227 VAL n 1 228 ALA n 1 229 TYR n 1 230 GLN n 1 231 HIS n 1 232 VAL n 1 233 ARG n 1 234 GLU n 1 235 ASP n 1 236 PRO n 1 237 ILE n 1 238 PRO n 1 239 PRO n 1 240 SER n 1 241 ALA n 1 242 ARG n 1 243 HIS n 1 244 GLU n 1 245 GLY n 1 246 LEU n 1 247 SER n 1 248 ALA n 1 249 ASP n 1 250 LEU n 1 251 ASP n 1 252 ALA n 1 253 VAL n 1 254 VAL n 1 255 LEU n 1 256 LYS n 1 257 ALA n 1 258 LEU n 1 259 ALA n 1 260 LYS n 1 261 ASN n 1 262 PRO n 1 263 GLU n 1 264 ASN n 1 265 ARG n 1 266 TYR n 1 267 GLN n 1 268 THR n 1 269 ALA n 1 270 ALA n 1 271 GLU n 1 272 MET n 1 273 ARG n 1 274 ALA n 1 275 ASP n 1 276 LEU n 1 277 VAL n 1 278 ARG n 1 279 VAL n 1 280 HIS n 1 281 ASN n 1 282 GLY n 1 283 GLU n 1 284 PRO n 1 285 PRO n 1 286 GLU n 1 287 ALA n 1 288 PRO n 1 289 LYS n 1 290 VAL n 1 291 LEU n 1 292 THR n 1 293 ASP n 1 294 ALA n 1 295 GLU n 1 296 ARG n 1 297 THR n 1 298 SER n 1 299 LEU n 1 300 LEU n 1 301 SER n 1 302 SER n 1 303 ALA n 1 304 ALA n 1 305 GLY n 1 306 ASN n 1 307 LEU n 1 308 SER n 1 309 GLY n 1 310 PRO n 1 311 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MRA_0016, pknB, PknB (Rv0014c)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 419947 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21+ _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A5TY84_MYCTA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession A5TY84 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ORM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 311 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A5TY84 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 308 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 308 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ORM GLY A 1 ? UNP A5TY84 ? ? 'expression tag' -2 1 1 3ORM SER A 2 ? UNP A5TY84 ? ? 'expression tag' -1 2 1 3ORM HIS A 3 ? UNP A5TY84 ? ? 'expression tag' 0 3 1 3ORM ALA A 79 ? UNP A5TY84 ASP 76 'engineered mutation' 76 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AGS non-polymer . 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' ;ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE ; 'C10 H16 N5 O12 P3 S' 523.247 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ORM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 3350, 100mM bis-Tris propane pH 8.5, 200mM NaF, VAPOR DIFFUSION, SITTING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2007-04-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Y _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.116 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.116 # _reflns.entry_id 3ORM _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 67 _reflns.d_resolution_high 2.5 _reflns.number_obs 9801 _reflns.number_all ? _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.07 _reflns.pdbx_netI_over_sigmaI 17.68 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 96.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.324 _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ORM _refine.ls_number_reflns_obs 9801 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.20 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.005 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 81.28 _refine.ls_R_factor_obs 0.2183 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2150 _refine.ls_R_factor_R_free 0.2884 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.63 _refine.ls_number_reflns_R_free 700 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 60.546 _refine.aniso_B[1][1] -4.9371 _refine.aniso_B[2][2] -0.8540 _refine.aniso_B[3][3] 5.7912 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.373 _refine.solvent_model_param_bsol 21.983 _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.77 _refine.pdbx_ls_cross_valid_method R-FREE _refine.details ? _refine.pdbx_starting_model 'PDB entry 1mru' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2010 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 2057 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 20.005 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2086 'X-RAY DIFFRACTION' ? f_angle_d 1.100 ? ? 2852 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 18.152 ? ? 790 'X-RAY DIFFRACTION' ? f_chiral_restr 0.053 ? ? 328 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 375 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.5000 2.6927 2386 0.3092 67.00 0.3654 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.6927 2.9628 2519 0.2653 71.00 0.3253 . . 101 . . . . 'X-RAY DIFFRACTION' . 2.9628 3.3898 2950 0.2196 84.00 0.2628 . . 168 . . . . 'X-RAY DIFFRACTION' . 3.3898 4.2640 3130 0.1869 89.00 0.2611 . . 168 . . . . 'X-RAY DIFFRACTION' . 4.2640 20.0055 3433 0.2008 96.00 0.3022 . . 130 . . . . # _struct.entry_id 3ORM _struct.title 'Mycobacterium tuberculosis PknB kinase domain D76A mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ORM _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'Structural Genomics, TB Structural Genomics Consortium, TBSGC, Kinase domain, Signal transduction, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Structure is of a monomeric mutant; the wild-type protein forms a dimer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 47 ? ALA A 50 ? ALA A 44 ALA A 47 5 ? 4 HELX_P HELX_P2 2 ASP A 52 ? ALA A 67 ? ASP A 49 ALA A 64 1 ? 16 HELX_P HELX_P3 3 LEU A 103 ? GLY A 111 ? LEU A 100 GLY A 108 1 ? 9 HELX_P HELX_P4 4 THR A 114 ? ASN A 135 ? THR A 111 ASN A 132 1 ? 22 HELX_P HELX_P5 5 LYS A 143 ? ALA A 145 ? LYS A 140 ALA A 142 5 ? 3 HELX_P HELX_P6 6 SER A 187 ? ARG A 192 ? SER A 184 ARG A 189 1 ? 6 HELX_P HELX_P7 7 ASP A 197 ? GLY A 215 ? ASP A 194 GLY A 212 1 ? 19 HELX_P HELX_P8 8 SER A 223 ? VAL A 232 ? SER A 220 VAL A 229 1 ? 10 HELX_P HELX_P9 9 PRO A 238 ? ARG A 242 ? PRO A 235 ARG A 239 5 ? 5 HELX_P HELX_P10 10 SER A 247 ? LEU A 258 ? SER A 244 LEU A 255 1 ? 12 HELX_P HELX_P11 11 ASN A 261 ? ARG A 265 ? ASN A 258 ARG A 262 5 ? 5 HELX_P HELX_P12 12 THR A 268 ? ASN A 281 ? THR A 265 ASN A 278 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 159 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 156 A MN 341 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc2 metalc ? ? A ASP 159 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 156 A MN 341 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc3 metalc ? ? B AGS . O2B ? ? ? 1_555 C MN . MN ? ? A AGS 340 A MN 341 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc4 metalc ? ? B AGS . S1G ? ? ? 1_555 C MN . MN ? ? A AGS 340 A MN 341 1_555 ? ? ? ? ? ? ? 2.596 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 14 ? PHE A 22 ? TYR A 11 PHE A 19 A 2 SER A 26 ? ASP A 33 ? SER A 23 ASP A 30 A 3 ARG A 38 ? LEU A 45 ? ARG A 35 LEU A 42 A 4 LEU A 90 ? GLU A 96 ? LEU A 87 GLU A 93 A 5 VAL A 77 ? ALA A 79 ? VAL A 74 ALA A 76 B 1 TYR A 14 ? PHE A 22 ? TYR A 11 PHE A 19 B 2 SER A 26 ? ASP A 33 ? SER A 23 ASP A 30 B 3 ARG A 38 ? LEU A 45 ? ARG A 35 LEU A 42 B 4 LEU A 90 ? GLU A 96 ? LEU A 87 GLU A 93 B 5 GLU A 82 ? ALA A 83 ? GLU A 79 ALA A 80 C 1 GLY A 100 ? THR A 102 ? GLY A 97 THR A 99 C 2 ILE A 147 ? SER A 150 ? ILE A 144 SER A 147 C 3 VAL A 155 ? VAL A 157 ? VAL A 152 VAL A 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 17 ? N GLY A 14 O LEU A 30 ? O LEU A 27 A 2 3 N HIS A 29 ? N HIS A 26 O VAL A 42 ? O VAL A 39 A 3 4 N LYS A 43 ? N LYS A 40 O ILE A 93 ? O ILE A 90 A 4 5 O VAL A 94 ? O VAL A 91 N TYR A 78 ? N TYR A 75 B 1 2 N GLY A 17 ? N GLY A 14 O LEU A 30 ? O LEU A 27 B 2 3 N HIS A 29 ? N HIS A 26 O VAL A 42 ? O VAL A 39 B 3 4 N LYS A 43 ? N LYS A 40 O ILE A 93 ? O ILE A 90 B 4 5 O LEU A 90 ? O LEU A 87 N ALA A 83 ? N ALA A 80 C 1 2 N VAL A 101 ? N VAL A 98 O ILE A 149 ? O ILE A 146 C 2 3 N MET A 148 ? N MET A 145 O LYS A 156 ? O LYS A 153 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AGS 340 ? 17 'BINDING SITE FOR RESIDUE AGS A 340' AC2 Software A MN 341 ? 2 'BINDING SITE FOR RESIDUE MN A 341' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 LEU A 20 ? LEU A 17 . ? 1_555 ? 2 AC1 17 GLY A 21 ? GLY A 18 . ? 1_555 ? 3 AC1 17 GLY A 23 ? GLY A 20 . ? 1_555 ? 4 AC1 17 GLY A 24 ? GLY A 21 . ? 1_555 ? 5 AC1 17 MET A 25 ? MET A 22 . ? 1_555 ? 6 AC1 17 SER A 26 ? SER A 23 . ? 1_555 ? 7 AC1 17 VAL A 28 ? VAL A 25 . ? 1_555 ? 8 AC1 17 LYS A 43 ? LYS A 40 . ? 1_555 ? 9 AC1 17 GLU A 96 ? GLU A 93 . ? 1_555 ? 10 AC1 17 VAL A 98 ? VAL A 95 . ? 1_555 ? 11 AC1 17 THR A 102 ? THR A 99 . ? 1_555 ? 12 AC1 17 LYS A 143 ? LYS A 140 . ? 1_555 ? 13 AC1 17 ASN A 146 ? ASN A 143 . ? 1_555 ? 14 AC1 17 MET A 158 ? MET A 155 . ? 1_555 ? 15 AC1 17 ASP A 159 ? ASP A 156 . ? 1_555 ? 16 AC1 17 HOH D . ? HOH A 309 . ? 1_555 ? 17 AC1 17 MN C . ? MN A 341 . ? 1_555 ? 18 AC2 2 ASP A 159 ? ASP A 156 . ? 1_555 ? 19 AC2 2 AGS B . ? AGS A 340 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ORM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ORM _atom_sites.fract_transf_matrix[1][1] 0.024717 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007421 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 THR 5 2 ? ? ? A . n A 1 6 THR 6 3 ? ? ? A . n A 1 7 PRO 7 4 ? ? ? A . n A 1 8 SER 8 5 ? ? ? A . n A 1 9 HIS 9 6 ? ? ? A . n A 1 10 LEU 10 7 ? ? ? A . n A 1 11 SER 11 8 ? ? ? A . n A 1 12 ASP 12 9 ? ? ? A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 TYR 14 11 11 TYR TYR A . n A 1 15 GLU 15 12 12 GLU GLU A . n A 1 16 LEU 16 13 13 LEU LEU A . n A 1 17 GLY 17 14 14 GLY GLY A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 GLY 21 18 18 GLY GLY A . n A 1 22 PHE 22 19 19 PHE PHE A . n A 1 23 GLY 23 20 20 GLY GLY A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 SER 26 23 23 SER SER A . n A 1 27 GLU 27 24 24 GLU GLU A . n A 1 28 VAL 28 25 25 VAL VAL A . n A 1 29 HIS 29 26 26 HIS HIS A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 ARG 32 29 29 ARG ARG A . n A 1 33 ASP 33 30 30 ASP ASP A . n A 1 34 LEU 34 31 31 LEU LEU A . n A 1 35 ARG 35 32 32 ARG ARG A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 HIS 37 34 34 HIS HIS A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 VAL 40 37 37 VAL VAL A . n A 1 41 ALA 41 38 38 ALA ALA A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 LYS 43 40 40 LYS LYS A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 LEU 45 42 42 LEU LEU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ALA 47 44 44 ALA ALA A . n A 1 48 ASP 48 45 45 ASP ASP A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 ARG 51 48 48 ARG ARG A . n A 1 52 ASP 52 49 49 ASP ASP A . n A 1 53 PRO 53 50 50 PRO PRO A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 PHE 55 52 52 PHE PHE A . n A 1 56 TYR 56 53 53 TYR TYR A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 ARG 58 55 55 ARG ARG A . n A 1 59 PHE 59 56 56 PHE PHE A . n A 1 60 ARG 60 57 57 ARG ARG A . n A 1 61 ARG 61 58 58 ARG ARG A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 GLN 64 61 61 GLN GLN A . n A 1 65 ASN 65 62 62 ASN ASN A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 ALA 67 64 64 ALA ALA A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 ASN 70 67 67 ASN ASN A . n A 1 71 HIS 71 68 68 HIS HIS A . n A 1 72 PRO 72 69 69 PRO PRO A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 VAL 75 72 72 VAL VAL A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 VAL 77 74 74 VAL VAL A . n A 1 78 TYR 78 75 75 TYR TYR A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 THR 80 77 77 THR THR A . n A 1 81 GLY 81 78 78 GLY GLY A . n A 1 82 GLU 82 79 79 GLU GLU A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 GLU 84 81 81 GLU GLU A . n A 1 85 THR 85 82 82 THR THR A . n A 1 86 PRO 86 83 83 PRO PRO A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 GLY 88 85 85 GLY GLY A . n A 1 89 PRO 89 86 86 PRO PRO A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 PRO 91 88 88 PRO PRO A . n A 1 92 TYR 92 89 89 TYR TYR A . n A 1 93 ILE 93 90 90 ILE ILE A . n A 1 94 VAL 94 91 91 VAL VAL A . n A 1 95 MET 95 92 92 MET MET A . n A 1 96 GLU 96 93 93 GLU GLU A . n A 1 97 TYR 97 94 94 TYR TYR A . n A 1 98 VAL 98 95 95 VAL VAL A . n A 1 99 ASP 99 96 96 ASP ASP A . n A 1 100 GLY 100 97 97 GLY GLY A . n A 1 101 VAL 101 98 98 VAL VAL A . n A 1 102 THR 102 99 99 THR THR A . n A 1 103 LEU 103 100 100 LEU LEU A . n A 1 104 ARG 104 101 101 ARG ARG A . n A 1 105 ASP 105 102 102 ASP ASP A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 VAL 107 104 104 VAL VAL A . n A 1 108 HIS 108 105 105 HIS HIS A . n A 1 109 THR 109 106 106 THR THR A . n A 1 110 GLU 110 107 107 GLU GLU A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 PRO 112 109 109 PRO PRO A . n A 1 113 MET 113 110 110 MET MET A . n A 1 114 THR 114 111 111 THR THR A . n A 1 115 PRO 115 112 112 PRO PRO A . n A 1 116 LYS 116 113 113 LYS LYS A . n A 1 117 ARG 117 114 114 ARG ARG A . n A 1 118 ALA 118 115 115 ALA ALA A . n A 1 119 ILE 119 116 116 ILE ILE A . n A 1 120 GLU 120 117 117 GLU GLU A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 ILE 122 119 119 ILE ILE A . n A 1 123 ALA 123 120 120 ALA ALA A . n A 1 124 ASP 124 121 121 ASP ASP A . n A 1 125 ALA 125 122 122 ALA ALA A . n A 1 126 CYS 126 123 123 CYS CYS A . n A 1 127 GLN 127 124 124 GLN GLN A . n A 1 128 ALA 128 125 125 ALA ALA A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 ASN 130 127 127 ASN ASN A . n A 1 131 PHE 131 128 128 PHE PHE A . n A 1 132 SER 132 129 129 SER SER A . n A 1 133 HIS 133 130 130 HIS HIS A . n A 1 134 GLN 134 131 131 GLN GLN A . n A 1 135 ASN 135 132 132 ASN ASN A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 ILE 137 134 134 ILE ILE A . n A 1 138 ILE 138 135 135 ILE ILE A . n A 1 139 HIS 139 136 136 HIS HIS A . n A 1 140 ARG 140 137 137 ARG ARG A . n A 1 141 ASP 141 138 138 ASP ASP A . n A 1 142 VAL 142 139 139 VAL VAL A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 PRO 144 141 141 PRO PRO A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 ASN 146 143 143 ASN ASN A . n A 1 147 ILE 147 144 144 ILE ILE A . n A 1 148 MET 148 145 145 MET MET A . n A 1 149 ILE 149 146 146 ILE ILE A . n A 1 150 SER 150 147 147 SER SER A . n A 1 151 ALA 151 148 148 ALA ALA A . n A 1 152 THR 152 149 149 THR THR A . n A 1 153 ASN 153 150 150 ASN ASN A . n A 1 154 ALA 154 151 151 ALA ALA A . n A 1 155 VAL 155 152 152 VAL VAL A . n A 1 156 LYS 156 153 153 LYS LYS A . n A 1 157 VAL 157 154 154 VAL VAL A . n A 1 158 MET 158 155 155 MET MET A . n A 1 159 ASP 159 156 156 ASP ASP A . n A 1 160 PHE 160 157 157 PHE PHE A . n A 1 161 GLY 161 158 158 GLY GLY A . n A 1 162 ILE 162 159 159 ILE ILE A . n A 1 163 ALA 163 160 160 ALA ALA A . n A 1 164 ARG 164 161 161 ARG ARG A . n A 1 165 ALA 165 162 162 ALA ALA A . n A 1 166 ILE 166 163 163 ILE ILE A . n A 1 167 ALA 167 164 164 ALA ALA A . n A 1 168 ASP 168 165 ? ? ? A . n A 1 169 SER 169 166 ? ? ? A . n A 1 170 GLY 170 167 ? ? ? A . n A 1 171 ASN 171 168 ? ? ? A . n A 1 172 SER 172 169 ? ? ? A . n A 1 173 VAL 173 170 ? ? ? A . n A 1 174 THR 174 171 ? ? ? A . n A 1 175 GLN 175 172 ? ? ? A . n A 1 176 THR 176 173 ? ? ? A . n A 1 177 ALA 177 174 ? ? ? A . n A 1 178 ALA 178 175 ? ? ? A . n A 1 179 VAL 179 176 ? ? ? A . n A 1 180 ILE 180 177 ? ? ? A . n A 1 181 GLY 181 178 ? ? ? A . n A 1 182 THR 182 179 179 THR THR A . n A 1 183 ALA 183 180 180 ALA ALA A . n A 1 184 GLN 184 181 181 GLN GLN A . n A 1 185 TYR 185 182 182 TYR TYR A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 SER 187 184 184 SER SER A . n A 1 188 PRO 188 185 185 PRO PRO A . n A 1 189 GLU 189 186 186 GLU GLU A . n A 1 190 GLN 190 187 187 GLN GLN A . n A 1 191 ALA 191 188 188 ALA ALA A . n A 1 192 ARG 192 189 189 ARG ARG A . n A 1 193 GLY 193 190 190 GLY GLY A . n A 1 194 ASP 194 191 191 ASP ASP A . n A 1 195 SER 195 192 192 SER SER A . n A 1 196 VAL 196 193 193 VAL VAL A . n A 1 197 ASP 197 194 194 ASP ASP A . n A 1 198 ALA 198 195 195 ALA ALA A . n A 1 199 ARG 199 196 196 ARG ARG A . n A 1 200 SER 200 197 197 SER SER A . n A 1 201 ASP 201 198 198 ASP ASP A . n A 1 202 VAL 202 199 199 VAL VAL A . n A 1 203 TYR 203 200 200 TYR TYR A . n A 1 204 SER 204 201 201 SER SER A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 GLY 206 203 203 GLY GLY A . n A 1 207 CYS 207 204 204 CYS CYS A . n A 1 208 VAL 208 205 205 VAL VAL A . n A 1 209 LEU 209 206 206 LEU LEU A . n A 1 210 TYR 210 207 207 TYR TYR A . n A 1 211 GLU 211 208 208 GLU GLU A . n A 1 212 VAL 212 209 209 VAL VAL A . n A 1 213 LEU 213 210 210 LEU LEU A . n A 1 214 THR 214 211 211 THR THR A . n A 1 215 GLY 215 212 212 GLY GLY A . n A 1 216 GLU 216 213 213 GLU GLU A . n A 1 217 PRO 217 214 214 PRO PRO A . n A 1 218 PRO 218 215 215 PRO PRO A . n A 1 219 PHE 219 216 216 PHE PHE A . n A 1 220 THR 220 217 217 THR THR A . n A 1 221 GLY 221 218 218 GLY GLY A . n A 1 222 ASP 222 219 219 ASP ASP A . n A 1 223 SER 223 220 220 SER SER A . n A 1 224 PRO 224 221 221 PRO PRO A . n A 1 225 VAL 225 222 222 VAL VAL A . n A 1 226 SER 226 223 223 SER SER A . n A 1 227 VAL 227 224 224 VAL VAL A . n A 1 228 ALA 228 225 225 ALA ALA A . n A 1 229 TYR 229 226 226 TYR TYR A . n A 1 230 GLN 230 227 227 GLN GLN A . n A 1 231 HIS 231 228 228 HIS HIS A . n A 1 232 VAL 232 229 229 VAL VAL A . n A 1 233 ARG 233 230 230 ARG ARG A . n A 1 234 GLU 234 231 231 GLU GLU A . n A 1 235 ASP 235 232 232 ASP ASP A . n A 1 236 PRO 236 233 233 PRO PRO A . n A 1 237 ILE 237 234 234 ILE ILE A . n A 1 238 PRO 238 235 235 PRO PRO A . n A 1 239 PRO 239 236 236 PRO PRO A . n A 1 240 SER 240 237 237 SER SER A . n A 1 241 ALA 241 238 238 ALA ALA A . n A 1 242 ARG 242 239 239 ARG ARG A . n A 1 243 HIS 243 240 240 HIS HIS A . n A 1 244 GLU 244 241 241 GLU GLU A . n A 1 245 GLY 245 242 242 GLY GLY A . n A 1 246 LEU 246 243 243 LEU LEU A . n A 1 247 SER 247 244 244 SER SER A . n A 1 248 ALA 248 245 245 ALA ALA A . n A 1 249 ASP 249 246 246 ASP ASP A . n A 1 250 LEU 250 247 247 LEU LEU A . n A 1 251 ASP 251 248 248 ASP ASP A . n A 1 252 ALA 252 249 249 ALA ALA A . n A 1 253 VAL 253 250 250 VAL VAL A . n A 1 254 VAL 254 251 251 VAL VAL A . n A 1 255 LEU 255 252 252 LEU LEU A . n A 1 256 LYS 256 253 253 LYS LYS A . n A 1 257 ALA 257 254 254 ALA ALA A . n A 1 258 LEU 258 255 255 LEU LEU A . n A 1 259 ALA 259 256 256 ALA ALA A . n A 1 260 LYS 260 257 257 LYS LYS A . n A 1 261 ASN 261 258 258 ASN ASN A . n A 1 262 PRO 262 259 259 PRO PRO A . n A 1 263 GLU 263 260 260 GLU GLU A . n A 1 264 ASN 264 261 261 ASN ASN A . n A 1 265 ARG 265 262 262 ARG ARG A . n A 1 266 TYR 266 263 263 TYR TYR A . n A 1 267 GLN 267 264 264 GLN GLN A . n A 1 268 THR 268 265 265 THR THR A . n A 1 269 ALA 269 266 266 ALA ALA A . n A 1 270 ALA 270 267 267 ALA ALA A . n A 1 271 GLU 271 268 268 GLU GLU A . n A 1 272 MET 272 269 269 MET MET A . n A 1 273 ARG 273 270 270 ARG ARG A . n A 1 274 ALA 274 271 271 ALA ALA A . n A 1 275 ASP 275 272 272 ASP ASP A . n A 1 276 LEU 276 273 273 LEU LEU A . n A 1 277 VAL 277 274 274 VAL VAL A . n A 1 278 ARG 278 275 275 ARG ARG A . n A 1 279 VAL 279 276 276 VAL VAL A . n A 1 280 HIS 280 277 277 HIS HIS A . n A 1 281 ASN 281 278 278 ASN ASN A . n A 1 282 GLY 282 279 279 GLY GLY A . n A 1 283 GLU 283 280 280 GLU GLU A . n A 1 284 PRO 284 281 281 PRO PRO A . n A 1 285 PRO 285 282 282 PRO PRO A . n A 1 286 GLU 286 283 283 GLU GLU A . n A 1 287 ALA 287 284 284 ALA ALA A . n A 1 288 PRO 288 285 285 PRO PRO A . n A 1 289 LYS 289 286 286 LYS LYS A . n A 1 290 VAL 290 287 287 VAL VAL A . n A 1 291 LEU 291 288 288 LEU LEU A . n A 1 292 THR 292 289 289 THR THR A . n A 1 293 ASP 293 290 ? ? ? A . n A 1 294 ALA 294 291 ? ? ? A . n A 1 295 GLU 295 292 ? ? ? A . n A 1 296 ARG 296 293 ? ? ? A . n A 1 297 THR 297 294 ? ? ? A . n A 1 298 SER 298 295 ? ? ? A . n A 1 299 LEU 299 296 ? ? ? A . n A 1 300 LEU 300 297 ? ? ? A . n A 1 301 SER 301 298 ? ? ? A . n A 1 302 SER 302 299 ? ? ? A . n A 1 303 ALA 303 300 ? ? ? A . n A 1 304 ALA 304 301 ? ? ? A . n A 1 305 GLY 305 302 ? ? ? A . n A 1 306 ASN 306 303 ? ? ? A . n A 1 307 LEU 307 304 ? ? ? A . n A 1 308 SER 308 305 ? ? ? A . n A 1 309 GLY 309 306 ? ? ? A . n A 1 310 PRO 310 307 ? ? ? A . n A 1 311 ARG 311 308 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'TB Structural Genomics Consortium' _pdbx_SG_project.initial_of_center TBSGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AGS 1 340 340 AGS AGS A . C 3 MN 1 341 341 MN MN A . D 4 HOH 1 309 309 HOH HOH A . D 4 HOH 2 310 310 HOH HOH A . D 4 HOH 3 311 311 HOH HOH A . D 4 HOH 4 312 312 HOH HOH A . D 4 HOH 5 313 313 HOH HOH A . D 4 HOH 6 314 314 HOH HOH A . D 4 HOH 7 315 315 HOH HOH A . D 4 HOH 8 316 316 HOH HOH A . D 4 HOH 9 317 317 HOH HOH A . D 4 HOH 10 318 318 HOH HOH A . D 4 HOH 11 319 319 HOH HOH A . D 4 HOH 12 320 320 HOH HOH A . D 4 HOH 13 321 321 HOH HOH A . D 4 HOH 14 322 322 HOH HOH A . D 4 HOH 15 323 323 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 159 ? A ASP 156 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 OD1 ? A ASP 159 ? A ASP 156 ? 1_555 53.1 ? 2 OD2 ? A ASP 159 ? A ASP 156 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 O2B ? B AGS . ? A AGS 340 ? 1_555 82.3 ? 3 OD1 ? A ASP 159 ? A ASP 156 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 O2B ? B AGS . ? A AGS 340 ? 1_555 87.7 ? 4 OD2 ? A ASP 159 ? A ASP 156 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 S1G ? B AGS . ? A AGS 340 ? 1_555 107.7 ? 5 OD1 ? A ASP 159 ? A ASP 156 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 S1G ? B AGS . ? A AGS 340 ? 1_555 156.2 ? 6 O2B ? B AGS . ? A AGS 340 ? 1_555 MN ? C MN . ? A MN 341 ? 1_555 S1G ? B AGS . ? A AGS 340 ? 1_555 74.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-02-06 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_ref_seq_dif.details' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -3.6692 22.9337 9.8537 0.3077 0.1512 0.1400 0.0199 -0.0514 0.0469 1.2759 0.6832 0.6907 -0.8443 -0.4863 0.0668 -0.0530 0.0603 0.0001 0.0158 -0.0130 0.2820 -0.4878 -0.2642 -0.1901 'X-RAY DIFFRACTION' 2 ? refined 10.1868 4.9315 23.1280 0.0401 0.0909 0.0816 -0.0762 -0.0005 0.0419 2.4570 1.8658 2.0674 -0.4200 0.7029 -0.3843 0.0645 0.1036 0.0002 -0.2362 -0.1065 -0.1388 -0.1381 0.0939 -0.4061 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 10 A 96 '( CHAIN A AND RESID 10:96 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 97 A 289 '( CHAIN A AND RESID 97:289 )' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement . ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 317 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 323 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLN _pdbx_validate_symm_contact.auth_seq_id_1 131 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 260 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 77 ? ? -134.64 -150.70 2 1 GLU A 81 ? ? -93.36 46.75 3 1 THR A 82 ? ? -46.96 159.43 4 1 ARG A 137 ? ? 95.31 -14.11 5 1 ASP A 138 ? ? -144.81 31.69 6 1 ALA A 180 ? ? -150.20 3.85 7 1 VAL A 229 ? ? -118.23 78.23 8 1 ARG A 230 ? ? 164.99 -46.72 9 1 GLU A 241 ? ? -66.54 -172.04 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C3'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id AGS _pdbx_validate_chiral.auth_seq_id 340 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 12 ? CG ? A GLU 15 CG 2 1 Y 1 A GLU 12 ? CD ? A GLU 15 CD 3 1 Y 1 A GLU 12 ? OE1 ? A GLU 15 OE1 4 1 Y 1 A GLU 12 ? OE2 ? A GLU 15 OE2 5 1 Y 1 A LEU 13 ? CG ? A LEU 16 CG 6 1 Y 1 A LEU 13 ? CD1 ? A LEU 16 CD1 7 1 Y 1 A LEU 13 ? CD2 ? A LEU 16 CD2 8 1 Y 1 A GLU 15 ? CG ? A GLU 18 CG 9 1 Y 1 A GLU 15 ? CD ? A GLU 18 CD 10 1 Y 1 A GLU 15 ? OE1 ? A GLU 18 OE1 11 1 Y 1 A GLU 15 ? OE2 ? A GLU 18 OE2 12 1 Y 1 A GLU 24 ? CG ? A GLU 27 CG 13 1 Y 1 A GLU 24 ? CD ? A GLU 27 CD 14 1 Y 1 A GLU 24 ? OE1 ? A GLU 27 OE1 15 1 Y 1 A GLU 24 ? OE2 ? A GLU 27 OE2 16 1 Y 1 A SER 51 ? OG ? A SER 54 OG 17 1 Y 1 A ARG 57 ? CG ? A ARG 60 CG 18 1 Y 1 A ARG 57 ? CD ? A ARG 60 CD 19 1 Y 1 A ARG 57 ? NE ? A ARG 60 NE 20 1 Y 1 A ARG 57 ? CZ ? A ARG 60 CZ 21 1 Y 1 A ARG 57 ? NH1 ? A ARG 60 NH1 22 1 Y 1 A ARG 57 ? NH2 ? A ARG 60 NH2 23 1 Y 1 A ARG 161 ? CG ? A ARG 164 CG 24 1 Y 1 A ARG 161 ? CD ? A ARG 164 CD 25 1 Y 1 A ARG 161 ? NE ? A ARG 164 NE 26 1 Y 1 A ARG 161 ? CZ ? A ARG 164 CZ 27 1 Y 1 A ARG 161 ? NH1 ? A ARG 164 NH1 28 1 Y 1 A ARG 161 ? NH2 ? A ARG 164 NH2 29 1 Y 1 A THR 289 ? OG1 ? A THR 292 OG1 30 1 Y 1 A THR 289 ? CG2 ? A THR 292 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A THR 2 ? A THR 5 6 1 Y 1 A THR 3 ? A THR 6 7 1 Y 1 A PRO 4 ? A PRO 7 8 1 Y 1 A SER 5 ? A SER 8 9 1 Y 1 A HIS 6 ? A HIS 9 10 1 Y 1 A LEU 7 ? A LEU 10 11 1 Y 1 A SER 8 ? A SER 11 12 1 Y 1 A ASP 9 ? A ASP 12 13 1 Y 1 A ASP 165 ? A ASP 168 14 1 Y 1 A SER 166 ? A SER 169 15 1 Y 1 A GLY 167 ? A GLY 170 16 1 Y 1 A ASN 168 ? A ASN 171 17 1 Y 1 A SER 169 ? A SER 172 18 1 Y 1 A VAL 170 ? A VAL 173 19 1 Y 1 A THR 171 ? A THR 174 20 1 Y 1 A GLN 172 ? A GLN 175 21 1 Y 1 A THR 173 ? A THR 176 22 1 Y 1 A ALA 174 ? A ALA 177 23 1 Y 1 A ALA 175 ? A ALA 178 24 1 Y 1 A VAL 176 ? A VAL 179 25 1 Y 1 A ILE 177 ? A ILE 180 26 1 Y 1 A GLY 178 ? A GLY 181 27 1 Y 1 A ASP 290 ? A ASP 293 28 1 Y 1 A ALA 291 ? A ALA 294 29 1 Y 1 A GLU 292 ? A GLU 295 30 1 Y 1 A ARG 293 ? A ARG 296 31 1 Y 1 A THR 294 ? A THR 297 32 1 Y 1 A SER 295 ? A SER 298 33 1 Y 1 A LEU 296 ? A LEU 299 34 1 Y 1 A LEU 297 ? A LEU 300 35 1 Y 1 A SER 298 ? A SER 301 36 1 Y 1 A SER 299 ? A SER 302 37 1 Y 1 A ALA 300 ? A ALA 303 38 1 Y 1 A ALA 301 ? A ALA 304 39 1 Y 1 A GLY 302 ? A GLY 305 40 1 Y 1 A ASN 303 ? A ASN 306 41 1 Y 1 A LEU 304 ? A LEU 307 42 1 Y 1 A SER 305 ? A SER 308 43 1 Y 1 A GLY 306 ? A GLY 309 44 1 Y 1 A PRO 307 ? A PRO 310 45 1 Y 1 A ARG 308 ? A ARG 311 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AGS PG P N N 1 AGS S1G S N N 2 AGS O2G O N N 3 AGS O3G O N N 4 AGS PB P N N 5 AGS O1B O N N 6 AGS O2B O N N 7 AGS O3B O N N 8 AGS PA P N N 9 AGS O1A O N N 10 AGS O2A O N N 11 AGS O3A O N N 12 AGS "O5'" O N N 13 AGS "C5'" C N N 14 AGS "C4'" C N R 15 AGS "O4'" O N N 16 AGS "C3'" C N S 17 AGS "O3'" O N N 18 AGS "C2'" C N R 19 AGS "O2'" O N N 20 AGS "C1'" C N R 21 AGS N9 N Y N 22 AGS C8 C Y N 23 AGS N7 N Y N 24 AGS C5 C Y N 25 AGS C6 C Y N 26 AGS N6 N N N 27 AGS N1 N Y N 28 AGS C2 C Y N 29 AGS N3 N Y N 30 AGS C4 C Y N 31 AGS HOG2 H N N 32 AGS H21 H N N 33 AGS HOB2 H N N 34 AGS HOA2 H N N 35 AGS "H5'1" H N N 36 AGS "H5'2" H N N 37 AGS "H4'" H N N 38 AGS "H3'" H N N 39 AGS "HO3'" H N N 40 AGS "H2'" H N N 41 AGS "HO2'" H N N 42 AGS "H1'" H N N 43 AGS H8 H N N 44 AGS HN61 H N N 45 AGS HN62 H N N 46 AGS H2 H N N 47 ALA N N N N 48 ALA CA C N S 49 ALA C C N N 50 ALA O O N N 51 ALA CB C N N 52 ALA OXT O N N 53 ALA H H N N 54 ALA H2 H N N 55 ALA HA H N N 56 ALA HB1 H N N 57 ALA HB2 H N N 58 ALA HB3 H N N 59 ALA HXT H N N 60 ARG N N N N 61 ARG CA C N S 62 ARG C C N N 63 ARG O O N N 64 ARG CB C N N 65 ARG CG C N N 66 ARG CD C N N 67 ARG NE N N N 68 ARG CZ C N N 69 ARG NH1 N N N 70 ARG NH2 N N N 71 ARG OXT O N N 72 ARG H H N N 73 ARG H2 H N N 74 ARG HA H N N 75 ARG HB2 H N N 76 ARG HB3 H N N 77 ARG HG2 H N N 78 ARG HG3 H N N 79 ARG HD2 H N N 80 ARG HD3 H N N 81 ARG HE H N N 82 ARG HH11 H N N 83 ARG HH12 H N N 84 ARG HH21 H N N 85 ARG HH22 H N N 86 ARG HXT H N N 87 ASN N N N N 88 ASN CA C N S 89 ASN C C N N 90 ASN O O N N 91 ASN CB C N N 92 ASN CG C N N 93 ASN OD1 O N N 94 ASN ND2 N N N 95 ASN OXT O N N 96 ASN H H N N 97 ASN H2 H N N 98 ASN HA H N N 99 ASN HB2 H N N 100 ASN HB3 H N N 101 ASN HD21 H N N 102 ASN HD22 H N N 103 ASN HXT H N N 104 ASP N N N N 105 ASP CA C N S 106 ASP C C N N 107 ASP O O N N 108 ASP CB C N N 109 ASP CG C N N 110 ASP OD1 O N N 111 ASP OD2 O N N 112 ASP OXT O N N 113 ASP H H N N 114 ASP H2 H N N 115 ASP HA H N N 116 ASP HB2 H N N 117 ASP HB3 H N N 118 ASP HD2 H N N 119 ASP HXT H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 MN MN MN N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TYR N N N N 369 TYR CA C N S 370 TYR C C N N 371 TYR O O N N 372 TYR CB C N N 373 TYR CG C Y N 374 TYR CD1 C Y N 375 TYR CD2 C Y N 376 TYR CE1 C Y N 377 TYR CE2 C Y N 378 TYR CZ C Y N 379 TYR OH O N N 380 TYR OXT O N N 381 TYR H H N N 382 TYR H2 H N N 383 TYR HA H N N 384 TYR HB2 H N N 385 TYR HB3 H N N 386 TYR HD1 H N N 387 TYR HD2 H N N 388 TYR HE1 H N N 389 TYR HE2 H N N 390 TYR HH H N N 391 TYR HXT H N N 392 VAL N N N N 393 VAL CA C N S 394 VAL C C N N 395 VAL O O N N 396 VAL CB C N N 397 VAL CG1 C N N 398 VAL CG2 C N N 399 VAL OXT O N N 400 VAL H H N N 401 VAL H2 H N N 402 VAL HA H N N 403 VAL HB H N N 404 VAL HG11 H N N 405 VAL HG12 H N N 406 VAL HG13 H N N 407 VAL HG21 H N N 408 VAL HG22 H N N 409 VAL HG23 H N N 410 VAL HXT H N N 411 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AGS PG S1G doub N N 1 AGS PG O2G sing N N 2 AGS PG O3G sing N N 3 AGS PG O3B sing N N 4 AGS PB O1B doub N N 5 AGS PB O2B sing N N 6 AGS PB O3B sing N N 7 AGS PB O3A sing N N 8 AGS PA O1A doub N N 9 AGS PA O2A sing N N 10 AGS PA O3A sing N N 11 AGS PA "O5'" sing N N 12 AGS "O5'" "C5'" sing N N 13 AGS "C5'" "C4'" sing N N 14 AGS "C4'" "O4'" sing N N 15 AGS "C4'" "C3'" sing N N 16 AGS "O4'" "C1'" sing N N 17 AGS "C3'" "O3'" sing N N 18 AGS "C3'" "C2'" sing N N 19 AGS "C2'" "O2'" sing N N 20 AGS "C2'" "C1'" sing N N 21 AGS "C1'" N9 sing N N 22 AGS N9 C8 sing Y N 23 AGS N9 C4 sing Y N 24 AGS C8 N7 doub Y N 25 AGS N7 C5 sing Y N 26 AGS C5 C6 sing Y N 27 AGS C5 C4 doub Y N 28 AGS C6 N6 sing N N 29 AGS C6 N1 doub Y N 30 AGS N1 C2 sing Y N 31 AGS C2 N3 doub Y N 32 AGS N3 C4 sing Y N 33 AGS O2G HOG2 sing N N 34 AGS O3G H21 sing N N 35 AGS O2B HOB2 sing N N 36 AGS O2A HOA2 sing N N 37 AGS "C5'" "H5'1" sing N N 38 AGS "C5'" "H5'2" sing N N 39 AGS "C4'" "H4'" sing N N 40 AGS "C3'" "H3'" sing N N 41 AGS "O3'" "HO3'" sing N N 42 AGS "C2'" "H2'" sing N N 43 AGS "O2'" "HO2'" sing N N 44 AGS "C1'" "H1'" sing N N 45 AGS C8 H8 sing N N 46 AGS N6 HN61 sing N N 47 AGS N6 HN62 sing N N 48 AGS C2 H2 sing N N 49 ALA N CA sing N N 50 ALA N H sing N N 51 ALA N H2 sing N N 52 ALA CA C sing N N 53 ALA CA CB sing N N 54 ALA CA HA sing N N 55 ALA C O doub N N 56 ALA C OXT sing N N 57 ALA CB HB1 sing N N 58 ALA CB HB2 sing N N 59 ALA CB HB3 sing N N 60 ALA OXT HXT sing N N 61 ARG N CA sing N N 62 ARG N H sing N N 63 ARG N H2 sing N N 64 ARG CA C sing N N 65 ARG CA CB sing N N 66 ARG CA HA sing N N 67 ARG C O doub N N 68 ARG C OXT sing N N 69 ARG CB CG sing N N 70 ARG CB HB2 sing N N 71 ARG CB HB3 sing N N 72 ARG CG CD sing N N 73 ARG CG HG2 sing N N 74 ARG CG HG3 sing N N 75 ARG CD NE sing N N 76 ARG CD HD2 sing N N 77 ARG CD HD3 sing N N 78 ARG NE CZ sing N N 79 ARG NE HE sing N N 80 ARG CZ NH1 sing N N 81 ARG CZ NH2 doub N N 82 ARG NH1 HH11 sing N N 83 ARG NH1 HH12 sing N N 84 ARG NH2 HH21 sing N N 85 ARG NH2 HH22 sing N N 86 ARG OXT HXT sing N N 87 ASN N CA sing N N 88 ASN N H sing N N 89 ASN N H2 sing N N 90 ASN CA C sing N N 91 ASN CA CB sing N N 92 ASN CA HA sing N N 93 ASN C O doub N N 94 ASN C OXT sing N N 95 ASN CB CG sing N N 96 ASN CB HB2 sing N N 97 ASN CB HB3 sing N N 98 ASN CG OD1 doub N N 99 ASN CG ND2 sing N N 100 ASN ND2 HD21 sing N N 101 ASN ND2 HD22 sing N N 102 ASN OXT HXT sing N N 103 ASP N CA sing N N 104 ASP N H sing N N 105 ASP N H2 sing N N 106 ASP CA C sing N N 107 ASP CA CB sing N N 108 ASP CA HA sing N N 109 ASP C O doub N N 110 ASP C OXT sing N N 111 ASP CB CG sing N N 112 ASP CB HB2 sing N N 113 ASP CB HB3 sing N N 114 ASP CG OD1 doub N N 115 ASP CG OD2 sing N N 116 ASP OD2 HD2 sing N N 117 ASP OXT HXT sing N N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 GLN N CA sing N N 132 GLN N H sing N N 133 GLN N H2 sing N N 134 GLN CA C sing N N 135 GLN CA CB sing N N 136 GLN CA HA sing N N 137 GLN C O doub N N 138 GLN C OXT sing N N 139 GLN CB CG sing N N 140 GLN CB HB2 sing N N 141 GLN CB HB3 sing N N 142 GLN CG CD sing N N 143 GLN CG HG2 sing N N 144 GLN CG HG3 sing N N 145 GLN CD OE1 doub N N 146 GLN CD NE2 sing N N 147 GLN NE2 HE21 sing N N 148 GLN NE2 HE22 sing N N 149 GLN OXT HXT sing N N 150 GLU N CA sing N N 151 GLU N H sing N N 152 GLU N H2 sing N N 153 GLU CA C sing N N 154 GLU CA CB sing N N 155 GLU CA HA sing N N 156 GLU C O doub N N 157 GLU C OXT sing N N 158 GLU CB CG sing N N 159 GLU CB HB2 sing N N 160 GLU CB HB3 sing N N 161 GLU CG CD sing N N 162 GLU CG HG2 sing N N 163 GLU CG HG3 sing N N 164 GLU CD OE1 doub N N 165 GLU CD OE2 sing N N 166 GLU OE2 HE2 sing N N 167 GLU OXT HXT sing N N 168 GLY N CA sing N N 169 GLY N H sing N N 170 GLY N H2 sing N N 171 GLY CA C sing N N 172 GLY CA HA2 sing N N 173 GLY CA HA3 sing N N 174 GLY C O doub N N 175 GLY C OXT sing N N 176 GLY OXT HXT sing N N 177 HIS N CA sing N N 178 HIS N H sing N N 179 HIS N H2 sing N N 180 HIS CA C sing N N 181 HIS CA CB sing N N 182 HIS CA HA sing N N 183 HIS C O doub N N 184 HIS C OXT sing N N 185 HIS CB CG sing N N 186 HIS CB HB2 sing N N 187 HIS CB HB3 sing N N 188 HIS CG ND1 sing Y N 189 HIS CG CD2 doub Y N 190 HIS ND1 CE1 doub Y N 191 HIS ND1 HD1 sing N N 192 HIS CD2 NE2 sing Y N 193 HIS CD2 HD2 sing N N 194 HIS CE1 NE2 sing Y N 195 HIS CE1 HE1 sing N N 196 HIS NE2 HE2 sing N N 197 HIS OXT HXT sing N N 198 HOH O H1 sing N N 199 HOH O H2 sing N N 200 ILE N CA sing N N 201 ILE N H sing N N 202 ILE N H2 sing N N 203 ILE CA C sing N N 204 ILE CA CB sing N N 205 ILE CA HA sing N N 206 ILE C O doub N N 207 ILE C OXT sing N N 208 ILE CB CG1 sing N N 209 ILE CB CG2 sing N N 210 ILE CB HB sing N N 211 ILE CG1 CD1 sing N N 212 ILE CG1 HG12 sing N N 213 ILE CG1 HG13 sing N N 214 ILE CG2 HG21 sing N N 215 ILE CG2 HG22 sing N N 216 ILE CG2 HG23 sing N N 217 ILE CD1 HD11 sing N N 218 ILE CD1 HD12 sing N N 219 ILE CD1 HD13 sing N N 220 ILE OXT HXT sing N N 221 LEU N CA sing N N 222 LEU N H sing N N 223 LEU N H2 sing N N 224 LEU CA C sing N N 225 LEU CA CB sing N N 226 LEU CA HA sing N N 227 LEU C O doub N N 228 LEU C OXT sing N N 229 LEU CB CG sing N N 230 LEU CB HB2 sing N N 231 LEU CB HB3 sing N N 232 LEU CG CD1 sing N N 233 LEU CG CD2 sing N N 234 LEU CG HG sing N N 235 LEU CD1 HD11 sing N N 236 LEU CD1 HD12 sing N N 237 LEU CD1 HD13 sing N N 238 LEU CD2 HD21 sing N N 239 LEU CD2 HD22 sing N N 240 LEU CD2 HD23 sing N N 241 LEU OXT HXT sing N N 242 LYS N CA sing N N 243 LYS N H sing N N 244 LYS N H2 sing N N 245 LYS CA C sing N N 246 LYS CA CB sing N N 247 LYS CA HA sing N N 248 LYS C O doub N N 249 LYS C OXT sing N N 250 LYS CB CG sing N N 251 LYS CB HB2 sing N N 252 LYS CB HB3 sing N N 253 LYS CG CD sing N N 254 LYS CG HG2 sing N N 255 LYS CG HG3 sing N N 256 LYS CD CE sing N N 257 LYS CD HD2 sing N N 258 LYS CD HD3 sing N N 259 LYS CE NZ sing N N 260 LYS CE HE2 sing N N 261 LYS CE HE3 sing N N 262 LYS NZ HZ1 sing N N 263 LYS NZ HZ2 sing N N 264 LYS NZ HZ3 sing N N 265 LYS OXT HXT sing N N 266 MET N CA sing N N 267 MET N H sing N N 268 MET N H2 sing N N 269 MET CA C sing N N 270 MET CA CB sing N N 271 MET CA HA sing N N 272 MET C O doub N N 273 MET C OXT sing N N 274 MET CB CG sing N N 275 MET CB HB2 sing N N 276 MET CB HB3 sing N N 277 MET CG SD sing N N 278 MET CG HG2 sing N N 279 MET CG HG3 sing N N 280 MET SD CE sing N N 281 MET CE HE1 sing N N 282 MET CE HE2 sing N N 283 MET CE HE3 sing N N 284 MET OXT HXT sing N N 285 PHE N CA sing N N 286 PHE N H sing N N 287 PHE N H2 sing N N 288 PHE CA C sing N N 289 PHE CA CB sing N N 290 PHE CA HA sing N N 291 PHE C O doub N N 292 PHE C OXT sing N N 293 PHE CB CG sing N N 294 PHE CB HB2 sing N N 295 PHE CB HB3 sing N N 296 PHE CG CD1 doub Y N 297 PHE CG CD2 sing Y N 298 PHE CD1 CE1 sing Y N 299 PHE CD1 HD1 sing N N 300 PHE CD2 CE2 doub Y N 301 PHE CD2 HD2 sing N N 302 PHE CE1 CZ doub Y N 303 PHE CE1 HE1 sing N N 304 PHE CE2 CZ sing Y N 305 PHE CE2 HE2 sing N N 306 PHE CZ HZ sing N N 307 PHE OXT HXT sing N N 308 PRO N CA sing N N 309 PRO N CD sing N N 310 PRO N H sing N N 311 PRO CA C sing N N 312 PRO CA CB sing N N 313 PRO CA HA sing N N 314 PRO C O doub N N 315 PRO C OXT sing N N 316 PRO CB CG sing N N 317 PRO CB HB2 sing N N 318 PRO CB HB3 sing N N 319 PRO CG CD sing N N 320 PRO CG HG2 sing N N 321 PRO CG HG3 sing N N 322 PRO CD HD2 sing N N 323 PRO CD HD3 sing N N 324 PRO OXT HXT sing N N 325 SER N CA sing N N 326 SER N H sing N N 327 SER N H2 sing N N 328 SER CA C sing N N 329 SER CA CB sing N N 330 SER CA HA sing N N 331 SER C O doub N N 332 SER C OXT sing N N 333 SER CB OG sing N N 334 SER CB HB2 sing N N 335 SER CB HB3 sing N N 336 SER OG HG sing N N 337 SER OXT HXT sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' AGS 3 'MANGANESE (II) ION' MN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MRU _pdbx_initial_refinement_model.details 'PDB entry 1mru' #