HEADER OXIDOREDUCTASE 09-SEP-10 3OSU TITLE CRYSTAL STRUCTURE OF THE 3-OXOACYL-ACYL CARRIER PROTEIN REDUCTASE, TITLE 2 FABG, FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-KETOACYL-ACYL CARRIER PROTEIN REDUCTASE; COMPND 5 EC: 1.1.1.100; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: SUBSP. AUREUS MU50; SOURCE 5 GENE: FABG, SAV1231; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL KEYWDS STRUCTURAL GENOMICS, CSGID, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 2 INFECTIOUS DISEASES, ALPHA AND BETA PROTEIN, NAD(P)-BINDING ROSSMAN- KEYWDS 3 FOLD DOMAIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,A.EDWARDS,W.F.ANDERSON, AUTHOR 2 A.SAVCHENKO,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 2 08-NOV-17 3OSU 1 REMARK REVDAT 1 29-SEP-10 3OSU 0 JRNL AUTH S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,A.EDWARDS,W.F.ANDERSON, JRNL AUTH 2 A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF THE 3-OXOACYL-ACYL CARRIER PROTEIN JRNL TITL 2 REDUCTASE, FABG, FROM STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_501 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 66598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3345 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.0345 - 4.0870 0.99 6369 287 0.1774 0.1849 REMARK 3 2 4.0870 - 3.2450 1.00 6268 375 0.1450 0.1864 REMARK 3 3 3.2450 - 2.8351 1.00 6321 363 0.1460 0.1803 REMARK 3 4 2.8351 - 2.5760 1.00 6303 341 0.1476 0.2050 REMARK 3 5 2.5760 - 2.3914 1.00 6386 318 0.1450 0.1948 REMARK 3 6 2.3914 - 2.2505 1.00 6326 362 0.1454 0.1917 REMARK 3 7 2.2505 - 2.1378 1.00 6250 335 0.1457 0.2135 REMARK 3 8 2.1378 - 2.0447 1.00 6409 318 0.1481 0.1700 REMARK 3 9 2.0447 - 1.9660 1.00 6333 321 0.1656 0.2076 REMARK 3 10 1.9660 - 1.8982 0.99 6288 325 0.2122 0.2947 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 67.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.68750 REMARK 3 B22 (A**2) : 5.68750 REMARK 3 B33 (A**2) : -0.35300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3735 REMARK 3 ANGLE : 0.978 5001 REMARK 3 CHIRALITY : 0.067 586 REMARK 3 PLANARITY : 0.003 642 REMARK 3 DIHEDRAL : 12.607 1399 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:58) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7120 -30.5013 20.8641 REMARK 3 T TENSOR REMARK 3 T11: 0.1695 T22: 0.1865 REMARK 3 T33: 0.2158 T12: -0.0351 REMARK 3 T13: -0.0521 T23: 0.0716 REMARK 3 L TENSOR REMARK 3 L11: 1.5071 L22: 2.0369 REMARK 3 L33: 1.8391 L12: 1.4160 REMARK 3 L13: 0.1020 L23: -1.0089 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: -0.1382 S13: -0.2791 REMARK 3 S21: -0.1044 S22: 0.1700 S23: 0.2203 REMARK 3 S31: 0.3315 S32: -0.1524 S33: -0.1793 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 59:192) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9561 -18.9277 15.8064 REMARK 3 T TENSOR REMARK 3 T11: 0.1313 T22: 0.1443 REMARK 3 T33: 0.1246 T12: 0.0140 REMARK 3 T13: -0.0091 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 1.4581 L22: 0.6244 REMARK 3 L33: 1.1852 L12: 0.5142 REMARK 3 L13: 0.4483 L23: -0.0178 REMARK 3 S TENSOR REMARK 3 S11: 0.1237 S12: 0.1920 S13: -0.1313 REMARK 3 S21: -0.0852 S22: 0.0122 S23: 0.0352 REMARK 3 S31: 0.1028 S32: 0.0244 S33: -0.1370 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 193:246) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2483 -26.8052 30.6093 REMARK 3 T TENSOR REMARK 3 T11: 0.2032 T22: 0.1695 REMARK 3 T33: 0.1942 T12: -0.0075 REMARK 3 T13: -0.0259 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 1.3545 L22: 0.1258 REMARK 3 L33: 0.7568 L12: 0.1298 REMARK 3 L13: -0.0278 L23: 0.0511 REMARK 3 S TENSOR REMARK 3 S11: 0.0794 S12: 0.0680 S13: -0.3777 REMARK 3 S21: 0.0272 S22: 0.0317 S23: -0.0009 REMARK 3 S31: 0.2306 S32: 0.0536 S33: -0.1037 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 5:58) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3858 3.0925 4.6463 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.4541 REMARK 3 T33: 0.2665 T12: -0.0397 REMARK 3 T13: 0.0947 T23: 0.1374 REMARK 3 L TENSOR REMARK 3 L11: 0.3763 L22: 1.6623 REMARK 3 L33: 2.1537 L12: 0.1844 REMARK 3 L13: -0.7799 L23: -0.9877 REMARK 3 S TENSOR REMARK 3 S11: 0.2469 S12: 0.5406 S13: 0.6341 REMARK 3 S21: -0.1961 S22: -0.2184 S23: -0.4533 REMARK 3 S31: -0.3716 S32: 0.3431 S33: 0.0060 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 59:172) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1579 -9.7026 8.5433 REMARK 3 T TENSOR REMARK 3 T11: 0.1042 T22: 0.2305 REMARK 3 T33: 0.0962 T12: 0.0299 REMARK 3 T13: 0.0287 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.8731 L22: 0.8623 REMARK 3 L33: 1.1809 L12: -0.1513 REMARK 3 L13: 0.4157 L23: -0.0256 REMARK 3 S TENSOR REMARK 3 S11: 0.1301 S12: 0.2940 S13: -0.0767 REMARK 3 S21: -0.1536 S22: -0.0533 S23: -0.0816 REMARK 3 S31: 0.0239 S32: 0.2246 S33: -0.0773 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 173:246) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3491 1.2275 21.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.1065 T22: 0.1720 REMARK 3 T33: 0.0836 T12: -0.0115 REMARK 3 T13: -0.0053 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.2693 L22: 0.7211 REMARK 3 L33: 0.6023 L12: 0.4131 REMARK 3 L13: -0.0103 L23: 0.2785 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.1901 S13: 0.0813 REMARK 3 S21: -0.0260 S22: 0.0213 S23: -0.0552 REMARK 3 S31: -0.0910 S32: 0.0791 S33: -0.0282 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OSU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000061529. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) DIAMOND LAUE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66682 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.66300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400,100MM POTASSIUM CHLORIDE, REMARK 280 10MM MAGNESIUM CHLORIDE, 50MM TRIS, PH 9, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.29667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 122.59333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 122.59333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.29667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 61.29667 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 357 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 306 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 314 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE B 1 REMARK 465 LYS B 2 REMARK 465 MSE B 3 REMARK 465 THR B 4 REMARK 465 THR B 192 REMARK 465 ASP B 193 REMARK 465 ALA B 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 193 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 140 -143.59 -106.74 REMARK 500 ASN A 241 13.29 -149.54 REMARK 500 SER B 140 -143.59 -108.25 REMARK 500 ASN B 241 14.08 -147.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 257 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 89 O REMARK 620 2 HOH A 298 O 130.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 259 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 251 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP05774 RELATED DB: TARGETDB DBREF 3OSU A 1 246 UNP P0A0H9 FABG_STAAM 1 246 DBREF 3OSU B 1 246 UNP P0A0H9 FABG_STAAM 1 246 SEQRES 1 A 246 MSE LYS MSE THR LYS SER ALA LEU VAL THR GLY ALA SER SEQRES 2 A 246 ARG GLY ILE GLY ARG SER ILE ALA LEU GLN LEU ALA GLU SEQRES 3 A 246 GLU GLY TYR ASN VAL ALA VAL ASN TYR ALA GLY SER LYS SEQRES 4 A 246 GLU LYS ALA GLU ALA VAL VAL GLU GLU ILE LYS ALA LYS SEQRES 5 A 246 GLY VAL ASP SER PHE ALA ILE GLN ALA ASN VAL ALA ASP SEQRES 6 A 246 ALA ASP GLU VAL LYS ALA MSE ILE LYS GLU VAL VAL SER SEQRES 7 A 246 GLN PHE GLY SER LEU ASP VAL LEU VAL ASN ASN ALA GLY SEQRES 8 A 246 ILE THR ARG ASP ASN LEU LEU MSE ARG MSE LYS GLU GLN SEQRES 9 A 246 GLU TRP ASP ASP VAL ILE ASP THR ASN LEU LYS GLY VAL SEQRES 10 A 246 PHE ASN CYS ILE GLN LYS ALA THR PRO GLN MSE LEU ARG SEQRES 11 A 246 GLN ARG SER GLY ALA ILE ILE ASN LEU SER SER VAL VAL SEQRES 12 A 246 GLY ALA VAL GLY ASN PRO GLY GLN ALA ASN TYR VAL ALA SEQRES 13 A 246 THR LYS ALA GLY VAL ILE GLY LEU THR LYS SER ALA ALA SEQRES 14 A 246 ARG GLU LEU ALA SER ARG GLY ILE THR VAL ASN ALA VAL SEQRES 15 A 246 ALA PRO GLY PHE ILE VAL SER ASP MSE THR ASP ALA LEU SEQRES 16 A 246 SER ASP GLU LEU LYS GLU GLN MSE LEU THR GLN ILE PRO SEQRES 17 A 246 LEU ALA ARG PHE GLY GLN ASP THR ASP ILE ALA ASN THR SEQRES 18 A 246 VAL ALA PHE LEU ALA SER ASP LYS ALA LYS TYR ILE THR SEQRES 19 A 246 GLY GLN THR ILE HIS VAL ASN GLY GLY MSE TYR MSE SEQRES 1 B 246 MSE LYS MSE THR LYS SER ALA LEU VAL THR GLY ALA SER SEQRES 2 B 246 ARG GLY ILE GLY ARG SER ILE ALA LEU GLN LEU ALA GLU SEQRES 3 B 246 GLU GLY TYR ASN VAL ALA VAL ASN TYR ALA GLY SER LYS SEQRES 4 B 246 GLU LYS ALA GLU ALA VAL VAL GLU GLU ILE LYS ALA LYS SEQRES 5 B 246 GLY VAL ASP SER PHE ALA ILE GLN ALA ASN VAL ALA ASP SEQRES 6 B 246 ALA ASP GLU VAL LYS ALA MSE ILE LYS GLU VAL VAL SER SEQRES 7 B 246 GLN PHE GLY SER LEU ASP VAL LEU VAL ASN ASN ALA GLY SEQRES 8 B 246 ILE THR ARG ASP ASN LEU LEU MSE ARG MSE LYS GLU GLN SEQRES 9 B 246 GLU TRP ASP ASP VAL ILE ASP THR ASN LEU LYS GLY VAL SEQRES 10 B 246 PHE ASN CYS ILE GLN LYS ALA THR PRO GLN MSE LEU ARG SEQRES 11 B 246 GLN ARG SER GLY ALA ILE ILE ASN LEU SER SER VAL VAL SEQRES 12 B 246 GLY ALA VAL GLY ASN PRO GLY GLN ALA ASN TYR VAL ALA SEQRES 13 B 246 THR LYS ALA GLY VAL ILE GLY LEU THR LYS SER ALA ALA SEQRES 14 B 246 ARG GLU LEU ALA SER ARG GLY ILE THR VAL ASN ALA VAL SEQRES 15 B 246 ALA PRO GLY PHE ILE VAL SER ASP MSE THR ASP ALA LEU SEQRES 16 B 246 SER ASP GLU LEU LYS GLU GLN MSE LEU THR GLN ILE PRO SEQRES 17 B 246 LEU ALA ARG PHE GLY GLN ASP THR ASP ILE ALA ASN THR SEQRES 18 B 246 VAL ALA PHE LEU ALA SER ASP LYS ALA LYS TYR ILE THR SEQRES 19 B 246 GLY GLN THR ILE HIS VAL ASN GLY GLY MSE TYR MSE MODRES 3OSU MSE A 1 MET SELENOMETHIONINE MODRES 3OSU MSE A 3 MET SELENOMETHIONINE MODRES 3OSU MSE A 72 MET SELENOMETHIONINE MODRES 3OSU MSE A 99 MET SELENOMETHIONINE MODRES 3OSU MSE A 101 MET SELENOMETHIONINE MODRES 3OSU MSE A 128 MET SELENOMETHIONINE MODRES 3OSU MSE A 191 MET SELENOMETHIONINE MODRES 3OSU MSE A 203 MET SELENOMETHIONINE MODRES 3OSU MSE A 244 MET SELENOMETHIONINE MODRES 3OSU MSE A 246 MET SELENOMETHIONINE MODRES 3OSU MSE B 72 MET SELENOMETHIONINE MODRES 3OSU MSE B 99 MET SELENOMETHIONINE MODRES 3OSU MSE B 101 MET SELENOMETHIONINE MODRES 3OSU MSE B 128 MET SELENOMETHIONINE MODRES 3OSU MSE B 191 MET SELENOMETHIONINE MODRES 3OSU MSE B 203 MET SELENOMETHIONINE MODRES 3OSU MSE B 244 MET SELENOMETHIONINE MODRES 3OSU MSE B 246 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 3 8 HET MSE A 72 8 HET MSE A 99 8 HET MSE A 101 8 HET MSE A 128 8 HET MSE A 191 8 HET MSE A 203 8 HET MSE A 244 8 HET MSE A 246 9 HET MSE B 72 8 HET MSE B 99 8 HET MSE B 101 8 HET MSE B 128 8 HET MSE B 191 8 HET MSE B 203 8 HET MSE B 244 8 HET MSE B 246 9 HET PEG A 247 7 HET PEG A 248 7 HET PEG A 249 7 HET PEG A 250 7 HET PEG A 251 7 HET PEG A 252 7 HET PEG A 253 7 HET PEG A 254 7 HET PEG A 255 7 HET MG A 256 1 HET MG A 257 1 HET PO4 A 258 5 HET PO4 A 259 5 HET PEG B 247 7 HET PEG B 248 7 HET PEG B 249 7 HET PEG B 250 7 HET PEG B 251 7 HETNAM MSE SELENOMETHIONINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 PEG 14(C4 H10 O3) FORMUL 12 MG 2(MG 2+) FORMUL 14 PO4 2(O4 P 3-) FORMUL 21 HOH *220(H2 O) HELIX 1 1 ARG A 14 GLU A 27 1 14 HELIX 2 2 SER A 38 LYS A 52 1 15 HELIX 3 3 ASP A 65 GLY A 81 1 17 HELIX 4 4 LYS A 102 LEU A 114 1 13 HELIX 5 5 LEU A 114 ARG A 132 1 19 HELIX 6 6 SER A 141 GLY A 147 1 7 HELIX 7 7 GLN A 151 ALA A 173 1 23 HELIX 8 8 ILE A 187 MSE A 191 5 5 HELIX 9 9 SER A 196 THR A 205 1 10 HELIX 10 10 GLN A 214 ALA A 226 1 13 HELIX 11 11 SER A 227 LYS A 231 5 5 HELIX 12 12 ARG B 14 GLU B 27 1 14 HELIX 13 13 SER B 38 ALA B 51 1 14 HELIX 14 14 ASP B 65 GLY B 81 1 17 HELIX 15 15 LEU B 97 MSE B 101 5 5 HELIX 16 16 LYS B 102 LEU B 114 1 13 HELIX 17 17 LEU B 114 ARG B 132 1 19 HELIX 18 18 SER B 141 GLY B 147 1 7 HELIX 19 19 GLN B 151 ALA B 173 1 23 HELIX 20 20 SER B 196 THR B 205 1 10 HELIX 21 21 GLN B 214 ALA B 226 1 13 HELIX 22 22 SER B 227 LYS B 231 5 5 SHEET 1 A 7 SER A 56 GLN A 60 0 SHEET 2 A 7 ASN A 30 TYR A 35 1 N VAL A 33 O PHE A 57 SHEET 3 A 7 SER A 6 VAL A 9 1 N ALA A 7 O ASN A 30 SHEET 4 A 7 VAL A 85 ASN A 88 1 O VAL A 87 N LEU A 8 SHEET 5 A 7 GLY A 134 LEU A 139 1 O ILE A 137 N LEU A 86 SHEET 6 A 7 ILE A 177 PRO A 184 1 O ASN A 180 N ASN A 138 SHEET 7 A 7 THR A 237 VAL A 240 1 O ILE A 238 N ALA A 183 SHEET 1 B 7 SER B 56 GLN B 60 0 SHEET 2 B 7 ASN B 30 TYR B 35 1 N VAL B 33 O PHE B 57 SHEET 3 B 7 SER B 6 VAL B 9 1 N ALA B 7 O ASN B 30 SHEET 4 B 7 VAL B 85 ASN B 88 1 O VAL B 87 N LEU B 8 SHEET 5 B 7 GLY B 134 LEU B 139 1 O ILE B 137 N LEU B 86 SHEET 6 B 7 ILE B 177 PRO B 184 1 O THR B 178 N ILE B 136 SHEET 7 B 7 THR B 237 VAL B 240 1 O ILE B 238 N ALA B 181 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C LYS A 2 N MSE A 3 1555 1555 1.33 LINK C MSE A 3 N THR A 4 1555 1555 1.33 LINK C ALA A 71 N MSE A 72 1555 1555 1.33 LINK C MSE A 72 N ILE A 73 1555 1555 1.33 LINK C LEU A 98 N MSE A 99 1555 1555 1.33 LINK C MSE A 99 N ARG A 100 1555 1555 1.33 LINK C ARG A 100 N MSE A 101 1555 1555 1.32 LINK C MSE A 101 N LYS A 102 1555 1555 1.33 LINK C GLN A 127 N MSE A 128 1555 1555 1.33 LINK C MSE A 128 N LEU A 129 1555 1555 1.33 LINK C ASP A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N THR A 192 1555 1555 1.33 LINK C GLN A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N LEU A 204 1555 1555 1.33 LINK C GLY A 243 N MSE A 244 1555 1555 1.33 LINK C MSE A 244 N TYR A 245 1555 1555 1.33 LINK C TYR A 245 N MSE A 246 1555 1555 1.32 LINK C ALA B 71 N MSE B 72 1555 1555 1.33 LINK C MSE B 72 N ILE B 73 1555 1555 1.33 LINK C LEU B 98 N MSE B 99 1555 1555 1.33 LINK C MSE B 99 N ARG B 100 1555 1555 1.32 LINK C ARG B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N LYS B 102 1555 1555 1.33 LINK C GLN B 127 N MSE B 128 1555 1555 1.33 LINK C MSE B 128 N LEU B 129 1555 1555 1.33 LINK C ASP B 190 N MSE B 191 1555 1555 1.33 LINK C GLN B 202 N MSE B 203 1555 1555 1.33 LINK C MSE B 203 N LEU B 204 1555 1555 1.33 LINK C GLY B 243 N MSE B 244 1555 1555 1.33 LINK C MSE B 244 N TYR B 245 1555 1555 1.33 LINK C TYR B 245 N MSE B 246 1555 1555 1.33 LINK O ASN A 89 MG MG A 257 1555 1555 2.72 LINK MG MG A 257 O HOH A 298 1555 1555 2.76 SITE 1 AC1 5 THR A 93 GLN A 151 TYR A 154 HOH A 319 SITE 2 AC1 5 HOH A 348 SITE 1 AC2 3 PRO A 149 GLY A 150 HOH A 345 SITE 1 AC3 4 GLU A 48 ALA A 51 LYS A 52 HOH A 362 SITE 1 AC4 3 ASN A 89 ALA A 90 GLY A 91 SITE 1 AC5 3 LYS A 74 GLN A 127 HOH A 350 SITE 1 AC6 5 ARG A 170 VAL B 146 ASN B 148 PHE B 186 SITE 2 AC6 5 GLN B 206 SITE 1 AC7 3 LYS A 52 GLY A 53 PEG A 254 SITE 1 AC8 5 LYS A 50 GLY A 53 PEG A 253 ASP B 197 SITE 2 AC8 5 LEU B 204 SITE 1 AC9 4 ASN A 62 ALA A 64 ASP A 67 THR A 112 SITE 1 BC1 2 ARG A 14 LYS A 41 SITE 1 BC2 3 ASN A 89 LYS A 158 HOH A 298 SITE 1 BC3 5 GLN A 127 ARG A 130 GLN A 131 ASP B 228 SITE 2 BC3 5 LYS B 231 SITE 1 BC4 6 LYS A 5 ASP A 84 GLY A 134 ALA A 226 SITE 2 BC4 6 HOH A 290 HOH A 292 SITE 1 BC5 4 LYS A 166 HOH A 271 HOH B 310 HOH B 338 SITE 1 BC6 5 VAL A 146 ASN A 148 GLN A 206 MSE A 244 SITE 2 BC6 5 ARG B 170 SITE 1 BC7 3 GLN B 127 HOH B 320 HOH B 331 SITE 1 BC8 3 ASN B 89 ALA B 90 GLY B 91 SITE 1 BC9 2 GLN B 151 TYR B 154 CRYST1 64.060 64.060 183.890 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015610 0.009013 0.000000 0.00000 SCALE2 0.000000 0.018025 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005438 0.00000 HETATM 1 N MSE A 1 -32.294 -30.899 25.678 1.00 70.57 N HETATM 2 CA MSE A 1 -32.514 -29.563 26.225 1.00 69.82 C HETATM 3 C MSE A 1 -31.636 -28.519 25.536 1.00 59.31 C HETATM 4 O MSE A 1 -30.412 -28.626 25.534 1.00 49.77 O HETATM 5 CB MSE A 1 -32.266 -29.556 27.737 1.00 74.32 C HETATM 6 CG MSE A 1 -32.374 -28.185 28.391 1.00 75.49 C HETATM 7 SE MSE A 1 -32.150 -28.266 30.332 0.75147.93 SE HETATM 8 CE MSE A 1 -32.054 -26.355 30.713 1.00125.69 C