data_3OVL # _entry.id 3OVL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OVL pdb_00003ovl 10.2210/pdb3ovl/pdb RCSB RCSB061628 ? ? WWPDB D_1000061628 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.value' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3OVL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-09-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ON9 'APO VQIVYK' unspecified PDB 3FQP 'APO VQIVYK (alternate polymorph)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Landau, M.' 1 'Eisenberg, D.' 2 # _citation.id primary _citation.title 'Towards a pharmacophore for amyloid.' _citation.journal_abbrev 'Plos Biol.' _citation.journal_volume 9 _citation.page_first e1001080 _citation.page_last e1001080 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1544-9173 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21695112 _citation.pdbx_database_id_DOI 10.1371/journal.pbio.1001080 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Landau, M.' 1 ? primary 'Sawaya, M.R.' 2 ? primary 'Faull, K.F.' 3 ? primary 'Laganowsky, A.' 4 ? primary 'Jiang, L.' 5 ? primary 'Sievers, S.A.' 6 ? primary 'Liu, J.' 7 ? primary 'Barrio, J.R.' 8 ? primary 'Eisenberg, D.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Microtubule-associated protein' 749.917 1 ? ? 'VQIVYK (residues 306-311)' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 non-polymer syn '7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid' 408.406 1 ? ? ? ? 5 water nat water 18.015 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VQIVYK _entity_poly.pdbx_seq_one_letter_code_can VQIVYK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETIC ACID' ACY 4 '7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid' ORA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 ILE n 1 4 VAL n 1 5 TYR n 1 6 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'VQIVYK (residues 306-311) from Tau, synthesized' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 ORA non-polymer . '7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid' 'Orange G' 'C16 H12 N2 O7 S2' 408.406 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 LYS 6 6 6 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 7 2 ZN ZN A . C 2 ZN 1 8 1 ZN ZN A . D 3 ACY 1 9 1 ACY ACY A . E 4 ORA 1 79 79 ORA ORA A . F 5 HOH 1 10 1 HOH HOH A . F 5 HOH 2 11 2 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 DENZO . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 55.056 _cell.length_b 4.831 _cell.length_c 22.127 _cell.angle_alpha 90.000 _cell.angle_beta 102.980 _cell.angle_gamma 90.000 _cell.entry_id 3OVL _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3OVL _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3OVL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details 'reservoir contained 0.1M Zinc Acetate dihydrate, 18% PEG 3350, vapor diffusion, hanging drop, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-11-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E # _reflns.entry_id 3OVL _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 90.000 _reflns.number_obs 587 _reflns.pdbx_Rmerge_I_obs 0.179 _reflns.pdbx_netI_over_sigmaI 4.500 _reflns.pdbx_chi_squared 1.071 _reflns.pdbx_redundancy 2.400 _reflns.percent_possible_obs 87.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 587 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 19.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.800 1.940 ? ? ? 0.433 ? ? 1.077 1.400 ? 88 71.000 1 1 1.940 2.130 ? ? ? 0.281 ? ? 1.081 1.600 ? 106 79.100 2 1 2.130 2.440 ? ? ? 0.475 ? ? 1.050 2.700 ? 128 90.100 3 1 2.440 3.080 ? ? ? 0.350 ? ? 1.065 3.100 ? 112 99.100 4 1 3.080 90.000 ? ? ? 0.163 ? ? 1.088 2.900 ? 153 97.500 5 1 # _refine.entry_id 3OVL _refine.ls_d_res_high 1.8100 _refine.ls_d_res_low 26.8200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 87.9900 _refine.ls_number_reflns_obs 586 _refine.ls_number_reflns_all 586 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all 0.2589 _refine.ls_R_factor_obs 0.2589 _refine.ls_R_factor_R_work 0.2589 _refine.ls_wR_factor_R_work 0.2514 _refine.ls_R_factor_R_free 0.2590 _refine.ls_wR_factor_R_free 0.3060 _refine.ls_percent_reflns_R_free 10.4000 _refine.ls_number_reflns_R_free 61 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.2828 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.6600 _refine.aniso_B[2][2] -0.7000 _refine.aniso_B[3][3] 1.2600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.2400 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9180 _refine.correlation_coeff_Fo_to_Fc_free 0.9640 _refine.overall_SU_R_Cruickshank_DPI 0.3608 _refine.overall_SU_R_free 0.2072 _refine.pdbx_overall_ESU_R_Free 0.2070 _refine.overall_SU_ML 0.1630 _refine.overall_SU_B 5.9190 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7697 _refine.B_iso_max 36.920 _refine.B_iso_min 6.300 _refine.occupancy_max 1.000 _refine.occupancy_min 0.250 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 53 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 88 _refine_hist.d_res_high 1.8100 _refine_hist.d_res_low 26.8200 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 85 0.011 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 44 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 118 1.220 2.402 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 104 0.627 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5 6.501 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 2 39.537 25.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11 8.441 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 11 0.080 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 80 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 18 0.000 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 33 1.089 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 11 0.410 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 52 1.640 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 52 2.252 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 66 3.319 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.8050 _refine_ls_shell.d_res_low 2.0170 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs 76.3700 _refine_ls_shell.number_reflns_R_work 118 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3770 _refine_ls_shell.R_factor_R_free 0.4480 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 139 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OVL _struct.title 'Structure of an amyloid forming peptide VQIVYK from the TAU protein in complex with orange G' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OVL _struct_keywords.text 'amyloid-like protofibril in complex with a small-molecule binder, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TAU_HUMAN _struct_ref.pdbx_db_accession P10636 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VQIVYK _struct_ref.pdbx_align_begin 623 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3OVL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10636 _struct_ref_seq.db_align_beg 623 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 628 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4.8310000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9.6620000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_455 -x-1/2,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 -27.5280000000 0.0000000000 1.0000000000 0.0000000000 2.4155000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 5 'crystal symmetry operation' 4_465 -x-1/2,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 -27.5280000000 0.0000000000 1.0000000000 0.0000000000 7.2465000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 6 'crystal symmetry operation' 4_475 -x-1/2,y+5/2,-z -1.0000000000 0.0000000000 0.0000000000 -27.5280000000 0.0000000000 1.0000000000 0.0000000000 12.0775000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;The biological unit is a pair of beta sheets with orange G interrelating between two pairs of sheets. One sheet is constructed from chain A and unit cell translations along the b direction (i.e. X,Y+1,Z; X,Y+2,Z; X,Y+3,Z, etc.). The second sheet is constructed from -X-1/2,1/2+Y,-Z;-X-1/2,3/2+Y,-Z;-X-1/2,5/2+Y,-Z; etc. The other pairs of sheets will be contracted from -X,Y,-Z+1, -X,Y+1,-Z+1,-X,Y+2,-Z+1; etc. and from X+1/2,1/2+Y,Z+1, X+1/2,3/2+Y,Z+1, X+1/2,5/2+Y,Z+1; etc. ; # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A LYS 6 NZ ? ? ? 1_555 B ZN . ZN ? ? A LYS 6 A ZN 7 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc2 metalc ? ? A LYS 6 O ? ? ? 1_555 C ZN . ZN ? ? A LYS 6 A ZN 8 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 E ORA . O4 ? ? A ZN 7 A ORA 79 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 E ORA . S1 ? ? A ZN 7 A ORA 79 1_555 ? ? ? ? ? ? ? 2.897 ? ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 D ACY . OXT ? ? A ZN 8 A ACY 9 1_555 ? ? ? ? ? ? ? 1.884 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NZ ? A LYS 6 ? A LYS 6 ? 1_555 ZN ? B ZN . ? A ZN 7 ? 1_555 O4 ? E ORA . ? A ORA 79 ? 1_555 89.8 ? 2 NZ ? A LYS 6 ? A LYS 6 ? 1_555 ZN ? B ZN . ? A ZN 7 ? 1_555 S1 ? E ORA . ? A ORA 79 ? 1_555 111.1 ? 3 O4 ? E ORA . ? A ORA 79 ? 1_555 ZN ? B ZN . ? A ZN 7 ? 1_555 S1 ? E ORA . ? A ORA 79 ? 1_555 30.0 ? 4 O ? A LYS 6 ? A LYS 6 ? 1_555 ZN ? C ZN . ? A ZN 8 ? 1_555 OXT ? D ACY . ? A ACY 9 ? 1_555 103.0 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 7 ? 10 'BINDING SITE FOR RESIDUE ZN A 7' AC2 Software A ZN 8 ? 4 'BINDING SITE FOR RESIDUE ZN A 8' AC3 Software A ACY 9 ? 6 'BINDING SITE FOR RESIDUE ACY A 9' AC4 Software A ORA 79 ? 17 'BINDING SITE FOR RESIDUE ORA A 79' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 LYS A 6 ? LYS A 6 . ? 1_545 ? 2 AC1 10 LYS A 6 ? LYS A 6 . ? 1_555 ? 3 AC1 10 LYS A 6 ? LYS A 6 . ? 2_556 ? 4 AC1 10 LYS A 6 ? LYS A 6 . ? 2_546 ? 5 AC1 10 ORA E . ? ORA A 79 . ? 1_565 ? 6 AC1 10 ORA E . ? ORA A 79 . ? 2_556 ? 7 AC1 10 ORA E . ? ORA A 79 . ? 2_546 ? 8 AC1 10 ORA E . ? ORA A 79 . ? 2_566 ? 9 AC1 10 ORA E . ? ORA A 79 . ? 1_555 ? 10 AC1 10 ORA E . ? ORA A 79 . ? 1_545 ? 11 AC2 4 VAL A 1 ? VAL A 1 . ? 1_556 ? 12 AC2 4 LYS A 6 ? LYS A 6 . ? 1_555 ? 13 AC2 4 ACY D . ? ACY A 9 . ? 1_555 ? 14 AC2 4 ACY D . ? ACY A 9 . ? 1_545 ? 15 AC3 6 VAL A 1 ? VAL A 1 . ? 1_566 ? 16 AC3 6 VAL A 1 ? VAL A 1 . ? 1_556 ? 17 AC3 6 LYS A 6 ? LYS A 6 . ? 1_565 ? 18 AC3 6 LYS A 6 ? LYS A 6 . ? 1_555 ? 19 AC3 6 ZN C . ? ZN A 8 . ? 1_565 ? 20 AC3 6 ZN C . ? ZN A 8 . ? 1_555 ? 21 AC4 17 GLN A 2 ? GLN A 2 . ? 1_565 ? 22 AC4 17 GLN A 2 ? GLN A 2 . ? 1_575 ? 23 AC4 17 GLN A 2 ? GLN A 2 . ? 1_555 ? 24 AC4 17 VAL A 4 ? VAL A 4 . ? 1_565 ? 25 AC4 17 VAL A 4 ? VAL A 4 . ? 1_555 ? 26 AC4 17 VAL A 4 ? VAL A 4 . ? 1_545 ? 27 AC4 17 LYS A 6 ? LYS A 6 . ? 1_555 ? 28 AC4 17 LYS A 6 ? LYS A 6 . ? 2_556 ? 29 AC4 17 LYS A 6 ? LYS A 6 . ? 2_566 ? 30 AC4 17 LYS A 6 ? LYS A 6 . ? 1_545 ? 31 AC4 17 LYS A 6 ? LYS A 6 . ? 2_546 ? 32 AC4 17 ZN B . ? ZN A 7 . ? 2_546 ? 33 AC4 17 ZN B . ? ZN A 7 . ? 1_545 ? 34 AC4 17 ZN B . ? ZN A 7 . ? 2_556 ? 35 AC4 17 ZN B . ? ZN A 7 . ? 1_555 ? 36 AC4 17 ZN B . ? ZN A 7 . ? 2_566 ? 37 AC4 17 ZN B . ? ZN A 7 . ? 1_565 ? # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id ZN _pdbx_struct_special_symmetry.auth_seq_id 7 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id ZN _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_phasing_MR.entry_id 3OVL _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.800 _pdbx_phasing_MR.d_res_low_rotation 26.820 _pdbx_phasing_MR.d_res_high_translation 1.800 _pdbx_phasing_MR.d_res_low_translation 26.820 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 GLN N N N N 9 GLN CA C N S 10 GLN C C N N 11 GLN O O N N 12 GLN CB C N N 13 GLN CG C N N 14 GLN CD C N N 15 GLN OE1 O N N 16 GLN NE2 N N N 17 GLN OXT O N N 18 GLN H H N N 19 GLN H2 H N N 20 GLN HA H N N 21 GLN HB2 H N N 22 GLN HB3 H N N 23 GLN HG2 H N N 24 GLN HG3 H N N 25 GLN HE21 H N N 26 GLN HE22 H N N 27 GLN HXT H N N 28 HOH O O N N 29 HOH H1 H N N 30 HOH H2 H N N 31 ILE N N N N 32 ILE CA C N S 33 ILE C C N N 34 ILE O O N N 35 ILE CB C N S 36 ILE CG1 C N N 37 ILE CG2 C N N 38 ILE CD1 C N N 39 ILE OXT O N N 40 ILE H H N N 41 ILE H2 H N N 42 ILE HA H N N 43 ILE HB H N N 44 ILE HG12 H N N 45 ILE HG13 H N N 46 ILE HG21 H N N 47 ILE HG22 H N N 48 ILE HG23 H N N 49 ILE HD11 H N N 50 ILE HD12 H N N 51 ILE HD13 H N N 52 ILE HXT H N N 53 LYS N N N N 54 LYS CA C N S 55 LYS C C N N 56 LYS O O N N 57 LYS CB C N N 58 LYS CG C N N 59 LYS CD C N N 60 LYS CE C N N 61 LYS NZ N N N 62 LYS OXT O N N 63 LYS H H N N 64 LYS H2 H N N 65 LYS HA H N N 66 LYS HB2 H N N 67 LYS HB3 H N N 68 LYS HG2 H N N 69 LYS HG3 H N N 70 LYS HD2 H N N 71 LYS HD3 H N N 72 LYS HE2 H N N 73 LYS HE3 H N N 74 LYS HZ1 H N N 75 LYS HZ2 H N N 76 LYS HZ3 H N N 77 LYS HXT H N N 78 ORA C1 C Y N 79 ORA N1 N N N 80 ORA O1 O N N 81 ORA S1 S N N 82 ORA C2 C Y N 83 ORA N2 N N N 84 ORA O2 O N N 85 ORA S2 S N N 86 ORA C3 C Y N 87 ORA O3 O N N 88 ORA C4 C Y N 89 ORA O4 O N N 90 ORA C5 C Y N 91 ORA O5 O N N 92 ORA C6 C Y N 93 ORA O6 O N N 94 ORA C7 C Y N 95 ORA O7 O N N 96 ORA C8 C Y N 97 ORA C9 C Y N 98 ORA C10 C Y N 99 ORA C11 C Y N 100 ORA C12 C Y N 101 ORA C13 C Y N 102 ORA C14 C Y N 103 ORA C15 C Y N 104 ORA C16 C Y N 105 ORA H1 H N N 106 ORA H2 H N N 107 ORA H3 H N N 108 ORA H4 H N N 109 ORA H5 H N N 110 ORA H6 H N N 111 ORA H7 H N N 112 ORA HO7 H N N 113 ORA H8 H N N 114 ORA H9 H N N 115 ORA H11 H N N 116 ORA H12 H N N 117 TYR N N N N 118 TYR CA C N S 119 TYR C C N N 120 TYR O O N N 121 TYR CB C N N 122 TYR CG C Y N 123 TYR CD1 C Y N 124 TYR CD2 C Y N 125 TYR CE1 C Y N 126 TYR CE2 C Y N 127 TYR CZ C Y N 128 TYR OH O N N 129 TYR OXT O N N 130 TYR H H N N 131 TYR H2 H N N 132 TYR HA H N N 133 TYR HB2 H N N 134 TYR HB3 H N N 135 TYR HD1 H N N 136 TYR HD2 H N N 137 TYR HE1 H N N 138 TYR HE2 H N N 139 TYR HH H N N 140 TYR HXT H N N 141 VAL N N N N 142 VAL CA C N S 143 VAL C C N N 144 VAL O O N N 145 VAL CB C N N 146 VAL CG1 C N N 147 VAL CG2 C N N 148 VAL OXT O N N 149 VAL H H N N 150 VAL H2 H N N 151 VAL HA H N N 152 VAL HB H N N 153 VAL HG11 H N N 154 VAL HG12 H N N 155 VAL HG13 H N N 156 VAL HG21 H N N 157 VAL HG22 H N N 158 VAL HG23 H N N 159 VAL HXT H N N 160 ZN ZN ZN N N 161 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 GLN N CA sing N N 8 GLN N H sing N N 9 GLN N H2 sing N N 10 GLN CA C sing N N 11 GLN CA CB sing N N 12 GLN CA HA sing N N 13 GLN C O doub N N 14 GLN C OXT sing N N 15 GLN CB CG sing N N 16 GLN CB HB2 sing N N 17 GLN CB HB3 sing N N 18 GLN CG CD sing N N 19 GLN CG HG2 sing N N 20 GLN CG HG3 sing N N 21 GLN CD OE1 doub N N 22 GLN CD NE2 sing N N 23 GLN NE2 HE21 sing N N 24 GLN NE2 HE22 sing N N 25 GLN OXT HXT sing N N 26 HOH O H1 sing N N 27 HOH O H2 sing N N 28 ILE N CA sing N N 29 ILE N H sing N N 30 ILE N H2 sing N N 31 ILE CA C sing N N 32 ILE CA CB sing N N 33 ILE CA HA sing N N 34 ILE C O doub N N 35 ILE C OXT sing N N 36 ILE CB CG1 sing N N 37 ILE CB CG2 sing N N 38 ILE CB HB sing N N 39 ILE CG1 CD1 sing N N 40 ILE CG1 HG12 sing N N 41 ILE CG1 HG13 sing N N 42 ILE CG2 HG21 sing N N 43 ILE CG2 HG22 sing N N 44 ILE CG2 HG23 sing N N 45 ILE CD1 HD11 sing N N 46 ILE CD1 HD12 sing N N 47 ILE CD1 HD13 sing N N 48 ILE OXT HXT sing N N 49 LYS N CA sing N N 50 LYS N H sing N N 51 LYS N H2 sing N N 52 LYS CA C sing N N 53 LYS CA CB sing N N 54 LYS CA HA sing N N 55 LYS C O doub N N 56 LYS C OXT sing N N 57 LYS CB CG sing N N 58 LYS CB HB2 sing N N 59 LYS CB HB3 sing N N 60 LYS CG CD sing N N 61 LYS CG HG2 sing N N 62 LYS CG HG3 sing N N 63 LYS CD CE sing N N 64 LYS CD HD2 sing N N 65 LYS CD HD3 sing N N 66 LYS CE NZ sing N N 67 LYS CE HE2 sing N N 68 LYS CE HE3 sing N N 69 LYS NZ HZ1 sing N N 70 LYS NZ HZ2 sing N N 71 LYS NZ HZ3 sing N N 72 LYS OXT HXT sing N N 73 ORA C1 C2 doub Y N 74 ORA C1 C3 sing Y N 75 ORA C1 H1 sing N N 76 ORA N1 N2 doub N N 77 ORA N1 C12 sing N N 78 ORA O1 S1 sing N N 79 ORA S1 O3 doub N N 80 ORA S1 O4 doub N N 81 ORA S1 C15 sing N N 82 ORA C2 C5 sing Y N 83 ORA C2 H2 sing N N 84 ORA N2 C13 sing N N 85 ORA O2 S2 sing N N 86 ORA S2 O5 doub N N 87 ORA S2 O6 doub N N 88 ORA S2 C16 sing N N 89 ORA C3 C6 doub Y N 90 ORA C3 H3 sing N N 91 ORA C4 C7 doub Y N 92 ORA C4 C10 sing Y N 93 ORA C4 H4 sing N N 94 ORA C5 C12 doub Y N 95 ORA C5 H5 sing N N 96 ORA C6 C12 sing Y N 97 ORA C6 H6 sing N N 98 ORA C7 C14 sing Y N 99 ORA C7 H7 sing N N 100 ORA O7 C14 sing N N 101 ORA O7 HO7 sing N N 102 ORA C8 C10 doub Y N 103 ORA C8 C15 sing Y N 104 ORA C8 H8 sing N N 105 ORA C9 C15 doub Y N 106 ORA C9 C16 sing Y N 107 ORA C9 H9 sing N N 108 ORA C10 C11 sing Y N 109 ORA C11 C13 sing Y N 110 ORA C11 C16 doub Y N 111 ORA C13 C14 doub Y N 112 ORA O1 H11 sing N N 113 ORA O2 H12 sing N N 114 TYR N CA sing N N 115 TYR N H sing N N 116 TYR N H2 sing N N 117 TYR CA C sing N N 118 TYR CA CB sing N N 119 TYR CA HA sing N N 120 TYR C O doub N N 121 TYR C OXT sing N N 122 TYR CB CG sing N N 123 TYR CB HB2 sing N N 124 TYR CB HB3 sing N N 125 TYR CG CD1 doub Y N 126 TYR CG CD2 sing Y N 127 TYR CD1 CE1 sing Y N 128 TYR CD1 HD1 sing N N 129 TYR CD2 CE2 doub Y N 130 TYR CD2 HD2 sing N N 131 TYR CE1 CZ doub Y N 132 TYR CE1 HE1 sing N N 133 TYR CE2 CZ sing Y N 134 TYR CE2 HE2 sing N N 135 TYR CZ OH sing N N 136 TYR OH HH sing N N 137 TYR OXT HXT sing N N 138 VAL N CA sing N N 139 VAL N H sing N N 140 VAL N H2 sing N N 141 VAL CA C sing N N 142 VAL CA CB sing N N 143 VAL CA HA sing N N 144 VAL C O doub N N 145 VAL C OXT sing N N 146 VAL CB CG1 sing N N 147 VAL CB CG2 sing N N 148 VAL CB HB sing N N 149 VAL CG1 HG11 sing N N 150 VAL CG1 HG12 sing N N 151 VAL CG1 HG13 sing N N 152 VAL CG2 HG21 sing N N 153 VAL CG2 HG22 sing N N 154 VAL CG2 HG23 sing N N 155 VAL OXT HXT sing N N 156 # _atom_sites.entry_id 3OVL _atom_sites.fract_transf_matrix[1][1] 0.018163 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004187 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.206996 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.046379 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S ZN # loop_