data_3OXE # _entry.id 3OXE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OXE pdb_00003oxe 10.2210/pdb3oxe/pdb NDB NA0818 ? ? RCSB RCSB061691 ? ? WWPDB D_1000061691 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3OWI _pdbx_database_related.details 'same RNA soaked in Mn2+' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OXE _pdbx_database_status.recvd_initial_deposition_date 2010-09-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huang, L.' 1 'Serganov, A.' 2 'Patel, D.J.' 3 # _citation.id primary _citation.title 'Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 40 _citation.page_first 774 _citation.page_last 786 _citation.year 2010 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21145485 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2010.11.026 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, L.' 1 ? primary 'Serganov, A.' 2 ? primary 'Patel, D.J.' 3 ? # _cell.entry_id 3OXE _cell.length_a 83.708 _cell.length_b 83.708 _cell.length_c 198.958 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OXE _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'domain II of glycine riboswitch' 28735.090 1 ? ? ? ? 2 polymer syn 'domain II of glycine riboswitch' 28655.109 1 ? ? ? ? 3 non-polymer syn GLYCINE 75.067 2 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 32 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 10 ? ? ? ? 6 water nat water 18.015 32 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes ;(GDP)GCUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGGAAACGCAGAGUGAAACUCUCAGGCAA AAGGACAGAGU(CCC) ; ;GGCUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGGAAACGCAGAGUGAAACUCUCAGGCAAAAGG ACAGAGUC ; A ? 2 polyribonucleotide no yes ;GGCUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGGAAACGCAGAGUGAAACUCUCAGGCAAAAGG ACAGAGU(CCC) ; ;GGCUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGGAAACGCAGAGUGAAACUCUCAGGCAAAAGG ACAGAGUC ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GDP n 1 2 G n 1 3 C n 1 4 U n 1 5 C n 1 6 U n 1 7 G n 1 8 G n 1 9 A n 1 10 G n 1 11 A n 1 12 G n 1 13 A n 1 14 A n 1 15 C n 1 16 C n 1 17 G n 1 18 U n 1 19 U n 1 20 U n 1 21 A n 1 22 A n 1 23 U n 1 24 C n 1 25 G n 1 26 G n 1 27 U n 1 28 C n 1 29 G n 1 30 C n 1 31 C n 1 32 G n 1 33 A n 1 34 A n 1 35 G n 1 36 G n 1 37 A n 1 38 G n 1 39 C n 1 40 A n 1 41 A n 1 42 G n 1 43 C n 1 44 U n 1 45 C n 1 46 U n 1 47 G n 1 48 C n 1 49 G n 1 50 G n 1 51 A n 1 52 A n 1 53 A n 1 54 C n 1 55 G n 1 56 C n 1 57 A n 1 58 G n 1 59 A n 1 60 G n 1 61 U n 1 62 G n 1 63 A n 1 64 A n 1 65 A n 1 66 C n 1 67 U n 1 68 C n 1 69 U n 1 70 C n 1 71 A n 1 72 G n 1 73 G n 1 74 C n 1 75 A n 1 76 A n 1 77 A n 1 78 A n 1 79 G n 1 80 G n 1 81 A n 1 82 C n 1 83 A n 1 84 G n 1 85 A n 1 86 G n 1 87 U n 1 88 CCC n 2 1 G n 2 2 G n 2 3 C n 2 4 U n 2 5 C n 2 6 U n 2 7 G n 2 8 G n 2 9 A n 2 10 G n 2 11 A n 2 12 G n 2 13 A n 2 14 A n 2 15 C n 2 16 C n 2 17 G n 2 18 U n 2 19 U n 2 20 U n 2 21 A n 2 22 A n 2 23 U n 2 24 C n 2 25 G n 2 26 G n 2 27 U n 2 28 C n 2 29 G n 2 30 C n 2 31 C n 2 32 G n 2 33 A n 2 34 A n 2 35 G n 2 36 G n 2 37 A n 2 38 G n 2 39 C n 2 40 A n 2 41 A n 2 42 G n 2 43 C n 2 44 U n 2 45 C n 2 46 U n 2 47 G n 2 48 C n 2 49 G n 2 50 G n 2 51 A n 2 52 A n 2 53 A n 2 54 C n 2 55 G n 2 56 C n 2 57 A n 2 58 G n 2 59 A n 2 60 G n 2 61 U n 2 62 G n 2 63 A n 2 64 A n 2 65 A n 2 66 C n 2 67 U n 2 68 C n 2 69 U n 2 70 C n 2 71 A n 2 72 G n 2 73 G n 2 74 C n 2 75 A n 2 76 A n 2 77 A n 2 78 A n 2 79 G n 2 80 G n 2 81 A n 2 82 C n 2 83 A n 2 84 G n 2 85 A n 2 86 G n 2 87 U n 2 88 CCC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'in vitro transcription' 2 1 sample ? ? ? ? ? 'in vitro transcription' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 GB CP001485 CP001485.1 1 ;CUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGAC AGAG ; 2123554 ? 2 GB CP001485 CP001485.1 2 ;CUCUGGAGAGAACCGUUUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGAC AGAG ; 2123554 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OXE A 3 ? 86 ? CP001485.1 2123554 ? 2123637 ? 3 86 2 2 3OXE B 3 ? 86 ? CP001485.1 2123554 ? 2123637 ? 3 86 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OXE GDP A 1 ? GB CP001485.1 ? ? insertion 1 1 1 3OXE G A 2 ? GB CP001485.1 ? ? insertion 2 2 1 3OXE G A 50 ? GB CP001485.1 C 2123601 conflict 50 3 1 3OXE A A 52 ? GB CP001485.1 U 2123603 conflict 52 4 1 3OXE C A 54 ? GB CP001485.1 U 2123605 conflict 54 5 1 3OXE U A 87 ? GB CP001485.1 ? ? insertion 87 6 1 3OXE CCC A 88 ? GB CP001485.1 ? ? insertion 88 7 2 3OXE G B 1 ? GB CP001485.1 ? ? insertion 1 8 2 3OXE G B 2 ? GB CP001485.1 ? ? insertion 2 9 2 3OXE G B 50 ? GB CP001485.1 C 2123601 conflict 50 10 2 3OXE A B 52 ? GB CP001485.1 U 2123603 conflict 52 11 2 3OXE C B 54 ? GB CP001485.1 U 2123605 conflict 54 12 2 3OXE U B 87 ? GB CP001485.1 ? ? insertion 87 13 2 3OXE CCC B 88 ? GB CP001485.1 ? ? insertion 88 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3OXE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.51 _exptl_crystal.density_percent_sol 64.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.1 _exptl_crystal_grow.pdbx_details ;0.05 M Na-cacodylate, pH 5.1, 0.2 M KCl, 8 % (w/v) PEG8000 and 80 mM magnesium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-06-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI mirror' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5000 # _reflns.entry_id 3OXE _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.899 _reflns.number_obs 18565 _reflns.number_all 18583 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 31.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.899 _reflns_shell.d_res_low 3.00 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.564 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs 100 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 1814 _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3OXE _refine.ls_number_reflns_obs 17579 _refine.ls_number_reflns_all 17594 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.899 _refine.ls_percent_reflns_obs 99.91 _refine.ls_R_factor_obs 0.20175 _refine.ls_R_factor_all 0.20175 _refine.ls_R_factor_R_work 0.20087 _refine.ls_R_factor_R_free 0.21902 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 947 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.B_iso_mean 72.980 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3OWI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.304 _refine.overall_SU_ML 0.236 _refine.overall_SU_B 25.505 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.824 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3807 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 3891 _refine_hist.d_res_high 2.899 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.021 ? 4294 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.011 3.000 ? 6712 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.047 0.200 ? 877 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1876 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.094 1.500 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.158 2.000 ? 8 'X-RAY DIFFRACTION' ? r_scbond_it 0.524 3.000 ? 4286 'X-RAY DIFFRACTION' ? r_scangle_it 0.910 4.500 ? 6704 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.899 _refine_ls_shell.d_res_low 2.973 _refine_ls_shell.number_reflns_R_work 1230 _refine_ls_shell.R_factor_R_work 0.371 _refine_ls_shell.percent_reflns_obs 99.69 _refine_ls_shell.R_factor_R_free 0.420 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OXE _struct.title 'crystal structure of glycine riboswitch, Mn2+ soaked' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OXE _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Gene expression regulator, glycine riboswitch, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? W N N 5 ? X N N 5 ? Y N N 5 ? Z N N 5 ? AA N N 3 ? BA N N 4 ? CA N N 4 ? DA N N 4 ? EA N N 4 ? FA N N 4 ? GA N N 4 ? HA N N 4 ? IA N N 4 ? JA N N 4 ? KA N N 4 ? LA N N 4 ? MA N N 4 ? NA N N 4 ? OA N N 5 ? PA N N 5 ? QA N N 5 ? RA N N 5 ? SA N N 5 ? TA N N 5 ? UA N N 6 ? VA N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GDP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GDP 1 A G 2 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale both ? A U 87 "O3'" ? ? ? 1_555 A CCC 88 P ? ? A U 87 A CCC 88 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale3 covale both ? B U 87 "O3'" ? ? ? 1_555 B CCC 88 P ? ? B U 87 B CCC 88 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? A GDP 1 N7 ? ? ? 1_555 U MN . MN ? ? A GDP 1 A MN 108 1_555 ? ? ? ? ? ? ? 2.603 ? ? metalc2 metalc ? ? A G 8 O6 ? ? ? 1_555 D MN . MN ? ? A G 8 A MN 109 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc3 metalc ? ? A G 10 OP2 ? ? ? 1_555 F MN . MN ? ? A G 10 A MN 111 1_555 ? ? ? ? ? ? ? 2.474 ? ? metalc4 metalc ? ? A G 17 OP2 ? ? ? 1_555 H MN . MN ? ? A G 17 A MN 112 1_555 ? ? ? ? ? ? ? 2.477 ? ? metalc5 metalc ? ? A U 19 OP2 ? ? ? 1_555 H MN . MN ? ? A U 19 A MN 112 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc6 metalc ? ? A U 20 OP2 ? ? ? 1_555 J MN . MN ? ? A U 20 A MN 113 1_555 ? ? ? ? ? ? ? 2.438 ? ? metalc7 metalc ? ? A A 21 OP2 ? ? ? 1_555 X MG . MG ? ? A A 21 A MG 135 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc8 metalc ? ? A A 22 OP1 ? ? ? 1_555 K MN . MN ? ? A A 22 A MN 103 1_555 ? ? ? ? ? ? ? 2.637 ? ? metalc9 metalc ? ? A G 32 "O2'" ? ? ? 1_555 I MN . MN ? ? A G 32 A MN 102 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc10 metalc ? ? A A 33 OP2 ? ? ? 1_555 I MN . MN ? ? A A 33 A MN 102 1_555 ? ? ? ? ? ? ? 1.958 ? ? metalc11 metalc ? ? A A 34 OP1 ? ? ? 1_555 G MN . MN ? ? A A 34 A MN 101 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc12 metalc ? ? A G 35 OP2 ? ? ? 1_555 G MN . MN ? ? A G 35 A MN 101 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc13 metalc ? ? A G 50 N7 ? ? ? 1_555 R MN . MN ? ? A G 50 A MN 117 1_555 ? ? ? ? ? ? ? 2.401 ? ? metalc14 metalc ? ? A G 62 N7 ? ? ? 1_555 N MN . MN ? ? A G 62 A MN 115 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc15 metalc ? ? A C 66 OP2 ? ? ? 1_555 I MN . MN ? ? A C 66 A MN 102 1_555 ? ? ? ? ? ? ? 2.197 ? ? metalc16 metalc ? ? A C 70 OP2 ? ? ? 1_555 O MN . MN ? ? A C 70 A MN 105 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc17 metalc ? ? A A 71 OP2 ? ? ? 1_555 O MN . MN ? ? A A 71 A MN 105 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc18 metalc ? ? A G 73 N7 ? ? ? 1_555 L MN . MN ? ? A G 73 A MN 114 1_555 ? ? ? ? ? ? ? 2.710 ? ? metalc19 metalc ? ? A A 75 OP2 ? ? ? 1_555 K MN . MN ? ? A A 75 A MN 103 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc20 metalc ? ? A A 75 OP1 ? ? ? 1_555 M MN . MN ? ? A A 75 A MN 104 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc21 metalc ? ? A A 76 OP2 ? ? ? 1_555 M MN . MN ? ? A A 76 A MN 104 1_555 ? ? ? ? ? ? ? 2.458 ? ? metalc22 metalc ? ? A A 78 OP2 ? ? ? 1_555 E MN . MN ? ? A A 78 A MN 110 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc23 metalc ? ? A G 80 O6 ? ? ? 1_555 D MN . MN ? ? A G 80 A MN 109 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc24 metalc ? ? G MN . MN ? ? ? 1_555 UA HOH . O ? ? A MN 101 A HOH 161 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc25 metalc ? ? I MN . MN ? ? ? 1_555 UA HOH . O ? ? A MN 102 A HOH 158 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc26 metalc ? ? I MN . MN ? ? ? 1_555 UA HOH . O ? ? A MN 102 A HOH 159 1_555 ? ? ? ? ? ? ? 1.819 ? ? metalc27 metalc ? ? I MN . MN ? ? ? 1_555 UA HOH . O ? ? A MN 102 A HOH 160 1_555 ? ? ? ? ? ? ? 1.847 ? ? metalc28 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 143 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc29 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 144 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc30 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 145 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc31 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 146 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc32 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 147 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc33 metalc ? ? W MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 133 A HOH 148 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc34 metalc ? ? X MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 135 A HOH 150 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc35 metalc ? ? X MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 135 A HOH 151 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc36 metalc ? ? X MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 135 A HOH 152 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc37 metalc ? ? X MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 135 A HOH 153 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc38 metalc ? ? X MG . MG ? ? ? 1_555 UA HOH . O ? ? A MG 135 A HOH 154 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc39 metalc ? ? UA HOH . O ? ? ? 1_555 OA MG . MG ? ? A HOH 149 B MG 134 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc40 metalc ? ? B G 10 OP2 ? ? ? 1_555 CA MN . MN ? ? B G 10 B MN 119 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc41 metalc ? ? B U 18 OP2 ? ? ? 1_555 IA MN . MN ? ? B U 18 B MN 125 1_555 ? ? ? ? ? ? ? 2.387 ? ? metalc42 metalc ? ? B U 20 OP2 ? ? ? 1_555 IA MN . MN ? ? B U 20 B MN 125 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc43 metalc ? ? B A 21 OP2 ? ? ? 1_555 HA MN . MN ? ? B A 21 B MN 124 1_555 ? ? ? ? ? ? ? 2.730 ? ? metalc44 metalc ? ? B U 23 OP1 ? ? ? 1_555 JA MN . MN ? ? B U 23 B MN 126 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc45 metalc ? ? B G 32 "O2'" ? ? ? 1_555 MA MN . MN ? ? B G 32 B MN 129 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc46 metalc ? ? B A 33 OP2 ? ? ? 1_555 MA MN . MN ? ? B A 33 B MN 129 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc47 metalc ? ? B A 34 OP1 ? ? ? 1_555 FA MN . MN ? ? B A 34 B MN 122 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc48 metalc ? ? B G 35 OP2 ? ? ? 1_555 FA MN . MN ? ? B G 35 B MN 122 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc49 metalc ? ? B A 52 OP2 ? ? ? 1_555 PA MG . MG ? ? B A 52 B MG 136 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc50 metalc ? ? B G 62 N7 ? ? ? 1_555 GA MN . MN ? ? B G 62 B MN 123 1_555 ? ? ? ? ? ? ? 2.302 ? ? metalc51 metalc ? ? B C 66 OP2 ? ? ? 1_555 MA MN . MN ? ? B C 66 B MN 129 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc52 metalc ? ? B C 70 OP2 ? ? ? 1_555 KA MN . MN ? ? B C 70 B MN 127 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc53 metalc ? ? B A 71 OP2 ? ? ? 1_555 KA MN . MN ? ? B A 71 B MN 127 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc54 metalc ? ? B C 74 OP1 ? ? ? 1_555 DA MN . MN ? ? B C 74 B MN 120 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc55 metalc ? ? B A 75 OP1 ? ? ? 1_555 DA MN . MN ? ? B A 75 B MN 120 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc56 metalc ? ? B A 75 OP2 ? ? ? 1_555 LA MN . MN ? ? B A 75 B MN 128 1_555 ? ? ? ? ? ? ? 2.396 ? ? metalc57 metalc ? ? B A 76 OP2 ? ? ? 1_555 DA MN . MN ? ? B A 76 B MN 120 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc58 metalc ? ? FA MN . MN ? ? ? 1_555 VA HOH . O ? ? B MN 122 B HOH 151 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc59 metalc ? ? MA MN . MN ? ? ? 1_555 VA HOH . O ? ? B MN 129 B HOH 149 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc60 metalc ? ? MA MN . MN ? ? ? 1_555 VA HOH . O ? ? B MN 129 B HOH 150 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc61 metalc ? ? OA MG . MG ? ? ? 1_555 VA HOH . O ? ? B MG 134 B HOH 142 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc62 metalc ? ? OA MG . MG ? ? ? 1_555 VA HOH . O ? ? B MG 134 B HOH 143 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc63 metalc ? ? OA MG . MG ? ? ? 1_555 VA HOH . O ? ? B MG 134 B HOH 144 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc64 metalc ? ? OA MG . MG ? ? ? 1_555 VA HOH . O ? ? B MG 134 B HOH 145 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc65 metalc ? ? OA MG . MG ? ? ? 1_555 VA HOH . O ? ? B MG 134 B HOH 146 1_555 ? ? ? ? ? ? ? 2.177 ? ? hydrog1 hydrog ? ? A GDP 1 N1 ? ? ? 1_555 A CCC 88 N3 ? ? A GDP 1 A CCC 88 1_555 ? ? ? ? ? ? 'GDP-CCC PAIR' ? ? ? hydrog2 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 87 O2 ? ? A G 2 A U 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 87 N3 ? ? A G 2 A U 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 3 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 3 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 3 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 85 N1 ? ? A U 4 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 85 N6 ? ? A U 4 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 84 N1 ? ? A C 5 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 84 O6 ? ? A C 5 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 84 N2 ? ? A C 5 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 83 N1 ? ? A U 6 A A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 83 N6 ? ? A U 6 A A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 82 N3 ? ? A G 7 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 82 O2 ? ? A G 7 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 82 N4 ? ? A G 7 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 B A 64 N3 ? ? A G 7 B A 64 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog18 hydrog ? ? A G 8 N2 ? ? ? 1_555 A A 81 N7 ? ? A G 8 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog19 hydrog ? ? A A 9 N7 ? ? ? 1_555 A G 80 N2 ? ? A A 9 A G 80 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog20 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 31 O2 ? ? A G 10 A C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog21 hydrog ? ? A G 10 O6 ? ? ? 1_555 A G 79 N2 ? ? A G 10 A G 79 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog22 hydrog ? ? A A 11 N3 ? ? ? 1_555 A G 73 N2 ? ? A A 11 A G 73 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog23 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 28 N3 ? ? A G 12 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 28 O2 ? ? A G 12 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 28 N4 ? ? A G 12 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 14 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 14 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 14 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 15 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 15 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 15 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 16 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 16 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 16 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 16 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 16 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 24 N3 ? ? A G 17 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 24 O2 ? ? A G 17 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 24 N4 ? ? A G 17 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 29 N1 ? ? ? 1_555 A C 74 N3 ? ? A G 29 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 29 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 29 O6 ? ? ? 1_555 A C 74 N4 ? ? A G 29 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 30 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 30 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 30 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 72 N1 ? ? A C 31 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 72 O6 ? ? A C 31 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 72 N2 ? ? A C 31 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 32 O6 ? ? ? 1_555 A A 71 N6 ? ? A G 32 A A 71 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog47 hydrog ? ? A A 34 N6 ? ? ? 1_555 A A 71 N3 ? ? A A 34 A A 71 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog48 hydrog ? ? A G 35 N1 ? ? ? 1_555 A C 70 N3 ? ? A G 35 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 35 N2 ? ? ? 1_555 A C 70 O2 ? ? A G 35 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 35 O6 ? ? ? 1_555 A C 70 N4 ? ? A G 35 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 36 N1 ? ? ? 1_555 A C 68 N3 ? ? A G 36 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 36 N2 ? ? ? 1_555 A C 68 O2 ? ? A G 36 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 36 O6 ? ? ? 1_555 A C 68 N4 ? ? A G 36 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A A 37 N1 ? ? ? 1_555 A U 67 N3 ? ? A A 37 A U 67 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog55 hydrog ? ? A G 38 N1 ? ? ? 1_555 A C 66 N3 ? ? A G 38 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 38 N2 ? ? ? 1_555 A C 66 O2 ? ? A G 38 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 38 O6 ? ? ? 1_555 A C 66 N4 ? ? A G 38 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 39 N3 ? ? ? 1_555 A A 64 N6 ? ? A C 39 A A 64 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog59 hydrog ? ? A C 39 N4 ? ? ? 1_555 A A 64 N7 ? ? A C 39 A A 64 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog60 hydrog ? ? A A 41 N6 ? ? ? 1_555 A G 62 N3 ? ? A A 41 A G 62 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog61 hydrog ? ? A A 41 N7 ? ? ? 1_555 A G 62 N2 ? ? A A 41 A G 62 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog62 hydrog ? ? A A 41 N3 ? ? ? 1_555 B G 84 N2 ? ? A A 41 B G 84 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog63 hydrog ? ? A G 42 N1 ? ? ? 1_555 A U 61 O2 ? ? A G 42 A U 61 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog64 hydrog ? ? A G 42 O6 ? ? ? 1_555 A U 61 N3 ? ? A G 42 A U 61 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog65 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 60 N1 ? ? A C 43 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 60 O6 ? ? A C 43 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 60 N2 ? ? A C 43 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A U 44 N3 ? ? ? 1_555 A A 59 N1 ? ? A U 44 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A U 44 O4 ? ? ? 1_555 A A 59 N6 ? ? A U 44 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 45 N3 ? ? ? 1_555 A G 58 N1 ? ? A C 45 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 45 N4 ? ? ? 1_555 A G 58 O6 ? ? A C 45 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 45 O2 ? ? ? 1_555 A G 58 N2 ? ? A C 45 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 46 N3 ? ? ? 1_555 A A 57 N1 ? ? A U 46 A A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A U 46 O4 ? ? ? 1_555 A A 57 N6 ? ? A U 46 A A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 47 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 47 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 47 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 47 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 47 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 47 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 54 N3 ? ? A G 49 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 54 O2 ? ? A G 49 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 54 N4 ? ? A G 49 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 50 N2 ? ? ? 1_555 A A 53 N7 ? ? A G 50 A A 53 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog85 hydrog ? ? A A 64 N3 ? ? ? 1_555 B G 7 N2 ? ? A A 64 B G 7 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog86 hydrog ? ? A U 69 O2 ? ? ? 1_555 A C 70 N4 ? ? A U 69 A C 70 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog87 hydrog ? ? A G 84 N2 ? ? ? 1_555 B A 41 N3 ? ? A G 84 B A 41 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog88 hydrog ? ? B G 1 N1 ? ? ? 1_555 B CCC 88 N3 ? ? B G 1 B CCC 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B G 1 N2 ? ? ? 1_555 B CCC 88 O2 ? ? B G 1 B CCC 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B G 1 O6 ? ? ? 1_555 B CCC 88 N4 ? ? B G 1 B CCC 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 87 O2 ? ? B G 2 B U 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog92 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 87 N3 ? ? B G 2 B U 87 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog93 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 86 N1 ? ? B C 3 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 86 O6 ? ? B C 3 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 86 N2 ? ? B C 3 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B U 4 N3 ? ? ? 1_555 B A 85 N1 ? ? B U 4 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B U 4 O4 ? ? ? 1_555 B A 85 N6 ? ? B U 4 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 84 N1 ? ? B C 5 B G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 84 O6 ? ? B C 5 B G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 84 N2 ? ? B C 5 B G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 83 N1 ? ? B U 6 B A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 83 N6 ? ? B U 6 B A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 82 N3 ? ? B G 7 B C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 82 O2 ? ? B G 7 B C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 82 N4 ? ? B G 7 B C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B G 8 N2 ? ? ? 1_555 B A 81 N7 ? ? B G 8 B A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog107 hydrog ? ? B A 9 N7 ? ? ? 1_555 B G 80 N2 ? ? B A 9 B G 80 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog108 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 31 O2 ? ? B G 10 B C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog109 hydrog ? ? B G 10 O6 ? ? ? 1_555 B G 79 N2 ? ? B G 10 B G 79 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog110 hydrog ? ? B A 11 N3 ? ? ? 1_555 B G 73 N2 ? ? B A 11 B G 73 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog111 hydrog ? ? B G 12 N1 ? ? ? 1_555 B C 28 N3 ? ? B G 12 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 12 N2 ? ? ? 1_555 B C 28 O2 ? ? B G 12 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B G 12 O6 ? ? ? 1_555 B C 28 N4 ? ? B G 12 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B A 14 N1 ? ? ? 1_555 B U 27 N3 ? ? B A 14 B U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B A 14 N6 ? ? ? 1_555 B U 27 O4 ? ? B A 14 B U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B C 15 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B C 15 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 16 N3 ? ? ? 1_555 B G 25 N1 ? ? B C 16 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B C 16 N4 ? ? ? 1_555 B G 25 O6 ? ? B C 16 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 16 O2 ? ? ? 1_555 B G 25 N2 ? ? B C 16 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 24 N3 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 24 O2 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 24 N4 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 29 N1 ? ? ? 1_555 B C 74 N3 ? ? B G 29 B C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 29 N2 ? ? ? 1_555 B C 74 O2 ? ? B G 29 B C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 29 O6 ? ? ? 1_555 B C 74 N4 ? ? B G 29 B C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 73 N1 ? ? B C 30 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 73 O6 ? ? B C 30 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 73 N2 ? ? B C 30 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B C 31 N3 ? ? ? 1_555 B G 72 N1 ? ? B C 31 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 31 N4 ? ? ? 1_555 B G 72 O6 ? ? B C 31 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B C 31 O2 ? ? ? 1_555 B G 72 N2 ? ? B C 31 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B G 32 O6 ? ? ? 1_555 B A 71 N6 ? ? B G 32 B A 71 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog135 hydrog ? ? B A 34 N6 ? ? ? 1_555 B A 71 N3 ? ? B A 34 B A 71 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog136 hydrog ? ? B G 35 N1 ? ? ? 1_555 B C 70 N3 ? ? B G 35 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B G 35 N2 ? ? ? 1_555 B C 70 O2 ? ? B G 35 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B G 35 O6 ? ? ? 1_555 B C 70 N4 ? ? B G 35 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B G 36 N1 ? ? ? 1_555 B C 68 N3 ? ? B G 36 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B G 36 N2 ? ? ? 1_555 B C 68 O2 ? ? B G 36 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B G 36 O6 ? ? ? 1_555 B C 68 N4 ? ? B G 36 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B A 37 N1 ? ? ? 1_555 B U 67 N3 ? ? B A 37 B U 67 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog143 hydrog ? ? B G 38 N1 ? ? ? 1_555 B C 66 N3 ? ? B G 38 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B G 38 N2 ? ? ? 1_555 B C 66 O2 ? ? B G 38 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B G 38 O6 ? ? ? 1_555 B C 66 N4 ? ? B G 38 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B C 39 N3 ? ? ? 1_555 B A 64 N6 ? ? B C 39 B A 64 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog147 hydrog ? ? B C 39 N4 ? ? ? 1_555 B A 64 N7 ? ? B C 39 B A 64 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog148 hydrog ? ? B G 42 N1 ? ? ? 1_555 B U 61 O2 ? ? B G 42 B U 61 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog149 hydrog ? ? B G 42 O6 ? ? ? 1_555 B U 61 N3 ? ? B G 42 B U 61 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog150 hydrog ? ? B C 43 N3 ? ? ? 1_555 B G 60 N1 ? ? B C 43 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? B C 43 N4 ? ? ? 1_555 B G 60 O6 ? ? B C 43 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? B C 43 O2 ? ? ? 1_555 B G 60 N2 ? ? B C 43 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? B U 44 N3 ? ? ? 1_555 B A 59 N1 ? ? B U 44 B A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? B U 44 O4 ? ? ? 1_555 B A 59 N6 ? ? B U 44 B A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? B C 45 O2 ? ? ? 1_555 B G 58 N2 ? ? B C 45 B G 58 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog156 hydrog ? ? B U 46 N3 ? ? ? 1_555 B A 57 N1 ? ? B U 46 B A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? B U 46 O4 ? ? ? 1_555 B A 57 N6 ? ? B U 46 B A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? B G 47 N1 ? ? ? 1_555 B C 56 N3 ? ? B G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? B G 47 N2 ? ? ? 1_555 B C 56 O2 ? ? B G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? B G 47 O6 ? ? ? 1_555 B C 56 N4 ? ? B G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? B C 48 N3 ? ? ? 1_555 B G 55 N1 ? ? B C 48 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? B C 48 N4 ? ? ? 1_555 B G 55 O6 ? ? B C 48 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? B C 48 O2 ? ? ? 1_555 B G 55 N2 ? ? B C 48 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? B G 49 N1 ? ? ? 1_555 B C 54 N3 ? ? B G 49 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? B G 49 N2 ? ? ? 1_555 B C 54 O2 ? ? B G 49 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? B G 49 O6 ? ? ? 1_555 B C 54 N4 ? ? B G 49 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? B U 69 O2 ? ? ? 1_555 B C 70 N4 ? ? B U 69 B C 70 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GLY 89 ? 9 'BINDING SITE FOR RESIDUE GLY A 89' AC2 Software B GLY 89 ? 9 'BINDING SITE FOR RESIDUE GLY B 89' AC3 Software A MN 101 ? 3 'BINDING SITE FOR RESIDUE MN A 101' AC4 Software A MN 102 ? 7 'BINDING SITE FOR RESIDUE MN A 102' AC5 Software A MN 103 ? 2 'BINDING SITE FOR RESIDUE MN A 103' AC6 Software A MN 104 ? 3 'BINDING SITE FOR RESIDUE MN A 104' AC7 Software A MN 105 ? 3 'BINDING SITE FOR RESIDUE MN A 105' AC8 Software A MN 106 ? 1 'BINDING SITE FOR RESIDUE MN A 106' AC9 Software A MN 108 ? 1 'BINDING SITE FOR RESIDUE MN A 108' BC1 Software A MN 109 ? 2 'BINDING SITE FOR RESIDUE MN A 109' BC2 Software A MN 110 ? 1 'BINDING SITE FOR RESIDUE MN A 110' BC3 Software A MN 111 ? 1 'BINDING SITE FOR RESIDUE MN A 111' BC4 Software A MN 112 ? 2 'BINDING SITE FOR RESIDUE MN A 112' BC5 Software A MN 113 ? 2 'BINDING SITE FOR RESIDUE MN A 113' BC6 Software A MN 114 ? 1 'BINDING SITE FOR RESIDUE MN A 114' BC7 Software A MN 115 ? 1 'BINDING SITE FOR RESIDUE MN A 115' BC8 Software A MN 117 ? 1 'BINDING SITE FOR RESIDUE MN A 117' BC9 Software B MN 118 ? 1 'BINDING SITE FOR RESIDUE MN B 118' CC1 Software B MN 119 ? 1 'BINDING SITE FOR RESIDUE MN B 119' CC2 Software B MN 120 ? 3 'BINDING SITE FOR RESIDUE MN B 120' CC3 Software B MN 121 ? 2 'BINDING SITE FOR RESIDUE MN B 121' CC4 Software B MN 122 ? 3 'BINDING SITE FOR RESIDUE MN B 122' CC5 Software B MN 123 ? 1 'BINDING SITE FOR RESIDUE MN B 123' CC6 Software B MN 124 ? 1 'BINDING SITE FOR RESIDUE MN B 124' CC7 Software B MN 125 ? 2 'BINDING SITE FOR RESIDUE MN B 125' CC8 Software B MN 126 ? 1 'BINDING SITE FOR RESIDUE MN B 126' CC9 Software B MN 127 ? 3 'BINDING SITE FOR RESIDUE MN B 127' DC1 Software B MN 128 ? 2 'BINDING SITE FOR RESIDUE MN B 128' DC2 Software B MN 129 ? 6 'BINDING SITE FOR RESIDUE MN B 129' DC3 Software B MN 130 ? 1 'BINDING SITE FOR RESIDUE MN B 130' DC4 Software A MG 133 ? 6 'BINDING SITE FOR RESIDUE MG A 133' DC5 Software B MG 134 ? 6 'BINDING SITE FOR RESIDUE MG B 134' DC6 Software A MG 135 ? 6 'BINDING SITE FOR RESIDUE MG A 135' DC7 Software B MG 136 ? 1 'BINDING SITE FOR RESIDUE MG B 136' DC8 Software B MG 141 ? 1 'BINDING SITE FOR RESIDUE MG B 141' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 G A 32 ? G A 32 . ? 1_555 ? 2 AC1 9 A A 34 ? A A 34 . ? 1_555 ? 3 AC1 9 G A 35 ? G A 35 . ? 1_555 ? 4 AC1 9 G A 36 ? G A 36 . ? 1_555 ? 5 AC1 9 C A 68 ? C A 68 . ? 1_555 ? 6 AC1 9 U A 69 ? U A 69 . ? 1_555 ? 7 AC1 9 A A 71 ? A A 71 . ? 1_555 ? 8 AC1 9 MN I . ? MN A 102 . ? 1_555 ? 9 AC1 9 HOH UA . ? HOH A 160 . ? 1_555 ? 10 AC2 9 G B 32 ? G B 32 . ? 1_555 ? 11 AC2 9 A B 34 ? A B 34 . ? 1_555 ? 12 AC2 9 G B 35 ? G B 35 . ? 1_555 ? 13 AC2 9 G B 36 ? G B 36 . ? 1_555 ? 14 AC2 9 C B 68 ? C B 68 . ? 1_555 ? 15 AC2 9 U B 69 ? U B 69 . ? 1_555 ? 16 AC2 9 A B 71 ? A B 71 . ? 1_555 ? 17 AC2 9 MN MA . ? MN B 129 . ? 1_555 ? 18 AC2 9 HOH VA . ? HOH B 150 . ? 1_555 ? 19 AC3 3 A A 34 ? A A 34 . ? 1_555 ? 20 AC3 3 G A 35 ? G A 35 . ? 1_555 ? 21 AC3 3 HOH UA . ? HOH A 161 . ? 1_555 ? 22 AC4 7 G A 32 ? G A 32 . ? 1_555 ? 23 AC4 7 A A 33 ? A A 33 . ? 1_555 ? 24 AC4 7 C A 66 ? C A 66 . ? 1_555 ? 25 AC4 7 GLY C . ? GLY A 89 . ? 1_555 ? 26 AC4 7 HOH UA . ? HOH A 158 . ? 1_555 ? 27 AC4 7 HOH UA . ? HOH A 159 . ? 1_555 ? 28 AC4 7 HOH UA . ? HOH A 160 . ? 1_555 ? 29 AC5 2 A A 22 ? A A 22 . ? 1_555 ? 30 AC5 2 A A 75 ? A A 75 . ? 1_555 ? 31 AC6 3 C A 74 ? C A 74 . ? 1_555 ? 32 AC6 3 A A 75 ? A A 75 . ? 1_555 ? 33 AC6 3 A A 76 ? A A 76 . ? 1_555 ? 34 AC7 3 U A 69 ? U A 69 . ? 1_555 ? 35 AC7 3 C A 70 ? C A 70 . ? 1_555 ? 36 AC7 3 A A 71 ? A A 71 . ? 1_555 ? 37 AC8 1 A A 33 ? A A 33 . ? 1_555 ? 38 AC9 1 GDP A 1 ? GDP A 1 . ? 1_555 ? 39 BC1 2 G A 8 ? G A 8 . ? 1_555 ? 40 BC1 2 G A 80 ? G A 80 . ? 1_555 ? 41 BC2 1 A A 78 ? A A 78 . ? 1_555 ? 42 BC3 1 G A 10 ? G A 10 . ? 1_555 ? 43 BC4 2 G A 17 ? G A 17 . ? 1_555 ? 44 BC4 2 U A 19 ? U A 19 . ? 1_555 ? 45 BC5 2 U A 20 ? U A 20 . ? 1_555 ? 46 BC5 2 A A 21 ? A A 21 . ? 1_555 ? 47 BC6 1 G A 73 ? G A 73 . ? 1_555 ? 48 BC7 1 G A 62 ? G A 62 . ? 1_555 ? 49 BC8 1 G A 50 ? G A 50 . ? 1_555 ? 50 BC9 1 G B 1 ? G B 1 . ? 1_555 ? 51 CC1 1 G B 10 ? G B 10 . ? 1_555 ? 52 CC2 3 C B 74 ? C B 74 . ? 1_555 ? 53 CC2 3 A B 75 ? A B 75 . ? 1_555 ? 54 CC2 3 A B 76 ? A B 76 . ? 1_555 ? 55 CC3 2 A B 78 ? A B 78 . ? 1_555 ? 56 CC3 2 G B 79 ? G B 79 . ? 1_555 ? 57 CC4 3 A B 34 ? A B 34 . ? 1_555 ? 58 CC4 3 G B 35 ? G B 35 . ? 1_555 ? 59 CC4 3 HOH VA . ? HOH B 151 . ? 1_555 ? 60 CC5 1 G B 62 ? G B 62 . ? 1_555 ? 61 CC6 1 A B 21 ? A B 21 . ? 1_555 ? 62 CC7 2 U B 18 ? U B 18 . ? 1_555 ? 63 CC7 2 U B 20 ? U B 20 . ? 1_555 ? 64 CC8 1 U B 23 ? U B 23 . ? 1_555 ? 65 CC9 3 U B 69 ? U B 69 . ? 1_555 ? 66 CC9 3 C B 70 ? C B 70 . ? 1_555 ? 67 CC9 3 A B 71 ? A B 71 . ? 1_555 ? 68 DC1 2 A B 14 ? A B 14 . ? 1_555 ? 69 DC1 2 A B 75 ? A B 75 . ? 1_555 ? 70 DC2 6 G B 32 ? G B 32 . ? 1_555 ? 71 DC2 6 A B 33 ? A B 33 . ? 1_555 ? 72 DC2 6 C B 66 ? C B 66 . ? 1_555 ? 73 DC2 6 GLY AA . ? GLY B 89 . ? 1_555 ? 74 DC2 6 HOH VA . ? HOH B 149 . ? 1_555 ? 75 DC2 6 HOH VA . ? HOH B 150 . ? 1_555 ? 76 DC3 1 G B 50 ? G B 50 . ? 1_555 ? 77 DC4 6 HOH UA . ? HOH A 143 . ? 1_555 ? 78 DC4 6 HOH UA . ? HOH A 144 . ? 1_555 ? 79 DC4 6 HOH UA . ? HOH A 145 . ? 1_555 ? 80 DC4 6 HOH UA . ? HOH A 146 . ? 1_555 ? 81 DC4 6 HOH UA . ? HOH A 147 . ? 1_555 ? 82 DC4 6 HOH UA . ? HOH A 148 . ? 1_555 ? 83 DC5 6 HOH UA . ? HOH A 149 . ? 1_555 ? 84 DC5 6 HOH VA . ? HOH B 142 . ? 1_555 ? 85 DC5 6 HOH VA . ? HOH B 143 . ? 1_555 ? 86 DC5 6 HOH VA . ? HOH B 144 . ? 1_555 ? 87 DC5 6 HOH VA . ? HOH B 145 . ? 1_555 ? 88 DC5 6 HOH VA . ? HOH B 146 . ? 1_555 ? 89 DC6 6 A A 21 ? A A 21 . ? 1_555 ? 90 DC6 6 HOH UA . ? HOH A 150 . ? 1_555 ? 91 DC6 6 HOH UA . ? HOH A 151 . ? 1_555 ? 92 DC6 6 HOH UA . ? HOH A 152 . ? 1_555 ? 93 DC6 6 HOH UA . ? HOH A 153 . ? 1_555 ? 94 DC6 6 HOH UA . ? HOH A 154 . ? 1_555 ? 95 DC7 1 A B 52 ? A B 52 . ? 1_555 ? 96 DC8 1 A B 37 ? A B 37 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OXE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OXE _atom_sites.fract_transf_matrix[1][1] 0.011946 _atom_sites.fract_transf_matrix[1][2] 0.006897 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013794 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005026 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG MN N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GDP 1 1 1 GDP GDP A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 U 4 4 4 U U A . n A 1 5 C 5 5 5 C C A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 G 8 8 8 G G A . n A 1 9 A 9 9 9 A A A . n A 1 10 G 10 10 10 G G A . n A 1 11 A 11 11 11 A A A . n A 1 12 G 12 12 12 G G A . n A 1 13 A 13 13 13 A A A . n A 1 14 A 14 14 14 A A A . n A 1 15 C 15 15 15 C C A . n A 1 16 C 16 16 16 C C A . n A 1 17 G 17 17 17 G G A . n A 1 18 U 18 18 18 U U A . n A 1 19 U 19 19 19 U U A . n A 1 20 U 20 20 20 U U A . n A 1 21 A 21 21 21 A A A . n A 1 22 A 22 22 22 A A A . n A 1 23 U 23 23 23 U U A . n A 1 24 C 24 24 24 C C A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 U 27 27 27 U U A . n A 1 28 C 28 28 28 C C A . n A 1 29 G 29 29 29 G G A . n A 1 30 C 30 30 30 C C A . n A 1 31 C 31 31 31 C C A . n A 1 32 G 32 32 32 G G A . n A 1 33 A 33 33 33 A A A . n A 1 34 A 34 34 34 A A A . n A 1 35 G 35 35 35 G G A . n A 1 36 G 36 36 36 G G A . n A 1 37 A 37 37 37 A A A . n A 1 38 G 38 38 38 G G A . n A 1 39 C 39 39 39 C C A . n A 1 40 A 40 40 40 A A A . n A 1 41 A 41 41 41 A A A . n A 1 42 G 42 42 42 G G A . n A 1 43 C 43 43 43 C C A . n A 1 44 U 44 44 44 U U A . n A 1 45 C 45 45 45 C C A . n A 1 46 U 46 46 46 U U A . n A 1 47 G 47 47 47 G G A . n A 1 48 C 48 48 48 C C A . n A 1 49 G 49 49 49 G G A . n A 1 50 G 50 50 50 G G A . n A 1 51 A 51 51 51 A A A . n A 1 52 A 52 52 52 A A A . n A 1 53 A 53 53 53 A A A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 C 56 56 56 C C A . n A 1 57 A 57 57 57 A A A . n A 1 58 G 58 58 58 G G A . n A 1 59 A 59 59 59 A A A . n A 1 60 G 60 60 60 G G A . n A 1 61 U 61 61 61 U U A . n A 1 62 G 62 62 62 G G A . n A 1 63 A 63 63 63 A A A . n A 1 64 A 64 64 64 A A A . n A 1 65 A 65 65 65 A A A . n A 1 66 C 66 66 66 C C A . n A 1 67 U 67 67 67 U U A . n A 1 68 C 68 68 68 C C A . n A 1 69 U 69 69 69 U U A . n A 1 70 C 70 70 70 C C A . n A 1 71 A 71 71 71 A A A . n A 1 72 G 72 72 72 G G A . n A 1 73 G 73 73 73 G G A . n A 1 74 C 74 74 74 C C A . n A 1 75 A 75 75 75 A A A . n A 1 76 A 76 76 76 A A A . n A 1 77 A 77 77 77 A A A . n A 1 78 A 78 78 78 A A A . n A 1 79 G 79 79 79 G G A . n A 1 80 G 80 80 80 G G A . n A 1 81 A 81 81 81 A A A . n A 1 82 C 82 82 82 C C A . n A 1 83 A 83 83 83 A A A . n A 1 84 G 84 84 84 G G A . n A 1 85 A 85 85 85 A A A . n A 1 86 G 86 86 86 G G A . n A 1 87 U 87 87 87 U U A . n A 1 88 CCC 88 88 88 CCC CCC A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 C 3 3 3 C C B . n B 2 4 U 4 4 4 U U B . n B 2 5 C 5 5 5 C C B . n B 2 6 U 6 6 6 U U B . n B 2 7 G 7 7 7 G G B . n B 2 8 G 8 8 8 G G B . n B 2 9 A 9 9 9 A A B . n B 2 10 G 10 10 10 G G B . n B 2 11 A 11 11 11 A A B . n B 2 12 G 12 12 12 G G B . n B 2 13 A 13 13 13 A A B . n B 2 14 A 14 14 14 A A B . n B 2 15 C 15 15 15 C C B . n B 2 16 C 16 16 16 C C B . n B 2 17 G 17 17 17 G G B . n B 2 18 U 18 18 18 U U B . n B 2 19 U 19 19 19 U U B . n B 2 20 U 20 20 20 U U B . n B 2 21 A 21 21 21 A A B . n B 2 22 A 22 22 22 A A B . n B 2 23 U 23 23 23 U U B . n B 2 24 C 24 24 24 C C B . n B 2 25 G 25 25 25 G G B . n B 2 26 G 26 26 26 G G B . n B 2 27 U 27 27 27 U U B . n B 2 28 C 28 28 28 C C B . n B 2 29 G 29 29 29 G G B . n B 2 30 C 30 30 30 C C B . n B 2 31 C 31 31 31 C C B . n B 2 32 G 32 32 32 G G B . n B 2 33 A 33 33 33 A A B . n B 2 34 A 34 34 34 A A B . n B 2 35 G 35 35 35 G G B . n B 2 36 G 36 36 36 G G B . n B 2 37 A 37 37 37 A A B . n B 2 38 G 38 38 38 G G B . n B 2 39 C 39 39 39 C C B . n B 2 40 A 40 40 40 A A B . n B 2 41 A 41 41 41 A A B . n B 2 42 G 42 42 42 G G B . n B 2 43 C 43 43 43 C C B . n B 2 44 U 44 44 44 U U B . n B 2 45 C 45 45 45 C C B . n B 2 46 U 46 46 46 U U B . n B 2 47 G 47 47 47 G G B . n B 2 48 C 48 48 48 C C B . n B 2 49 G 49 49 49 G G B . n B 2 50 G 50 50 50 G G B . n B 2 51 A 51 51 51 A A B . n B 2 52 A 52 52 52 A A B . n B 2 53 A 53 53 53 A A B . n B 2 54 C 54 54 54 C C B . n B 2 55 G 55 55 55 G G B . n B 2 56 C 56 56 56 C C B . n B 2 57 A 57 57 57 A A B . n B 2 58 G 58 58 58 G G B . n B 2 59 A 59 59 59 A A B . n B 2 60 G 60 60 60 G G B . n B 2 61 U 61 61 61 U U B . n B 2 62 G 62 62 62 G G B . n B 2 63 A 63 63 63 A A B . n B 2 64 A 64 64 64 A A B . n B 2 65 A 65 65 65 A A B . n B 2 66 C 66 66 66 C C B . n B 2 67 U 67 67 67 U U B . n B 2 68 C 68 68 68 C C B . n B 2 69 U 69 69 69 U U B . n B 2 70 C 70 70 70 C C B . n B 2 71 A 71 71 71 A A B . n B 2 72 G 72 72 72 G G B . n B 2 73 G 73 73 73 G G B . n B 2 74 C 74 74 74 C C B . n B 2 75 A 75 75 75 A A B . n B 2 76 A 76 76 76 A A B . n B 2 77 A 77 77 77 A A B . n B 2 78 A 78 78 78 A A B . n B 2 79 G 79 79 79 G G B . n B 2 80 G 80 80 80 G G B . n B 2 81 A 81 81 81 A A B . n B 2 82 C 82 82 82 C C B . n B 2 83 A 83 83 83 A A B . n B 2 84 G 84 84 84 G G B . n B 2 85 A 85 85 85 A A B . n B 2 86 G 86 86 86 G G B . n B 2 87 U 87 87 87 U U B . n B 2 88 CCC 88 88 88 CCC CCC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GLY 1 89 89 GLY GLY A . D 4 MN 1 109 109 MN MN A . E 4 MN 1 110 110 MN MN A . F 4 MN 1 111 111 MN MN A . G 4 MN 1 101 101 MN MN A . H 4 MN 1 112 112 MN MN A . I 4 MN 1 102 102 MN MN A . J 4 MN 1 113 113 MN MN A . K 4 MN 1 103 103 MN MN A . L 4 MN 1 114 114 MN MN A . M 4 MN 1 104 104 MN MN A . N 4 MN 1 115 115 MN MN A . O 4 MN 1 105 105 MN MN A . P 4 MN 1 116 116 MN MN A . Q 4 MN 1 106 106 MN MN A . R 4 MN 1 117 117 MN MN A . S 4 MN 1 107 107 MN MN A . T 4 MN 1 131 131 MN MN A . U 4 MN 1 108 108 MN MN A . V 4 MN 1 132 132 MN MN A . W 5 MG 1 133 133 MG MG A . X 5 MG 1 135 135 MG MG A . Y 5 MG 1 137 137 MG MG A . Z 5 MG 1 142 142 MG MG A . AA 3 GLY 1 89 89 GLY GLY B . BA 4 MN 1 118 118 MN MN B . CA 4 MN 1 119 119 MN MN B . DA 4 MN 1 120 120 MN MN B . EA 4 MN 1 121 121 MN MN B . FA 4 MN 1 122 122 MN MN B . GA 4 MN 1 123 123 MN MN B . HA 4 MN 1 124 124 MN MN B . IA 4 MN 1 125 125 MN MN B . JA 4 MN 1 126 126 MN MN B . KA 4 MN 1 127 127 MN MN B . LA 4 MN 1 128 128 MN MN B . MA 4 MN 1 129 129 MN MN B . NA 4 MN 1 130 130 MN MN B . OA 5 MG 1 134 134 MG MG B . PA 5 MG 1 136 136 MG MG B . QA 5 MG 1 138 138 MG MG B . RA 5 MG 1 139 139 MG MG B . SA 5 MG 1 140 140 MG MG B . TA 5 MG 1 141 141 MG MG B . UA 6 HOH 1 143 143 HOH HOH A . UA 6 HOH 2 144 144 HOH HOH A . UA 6 HOH 3 145 145 HOH HOH A . UA 6 HOH 4 146 146 HOH HOH A . UA 6 HOH 5 147 147 HOH HOH A . UA 6 HOH 6 148 148 HOH HOH A . UA 6 HOH 7 149 149 HOH HOH A . UA 6 HOH 8 150 150 HOH HOH A . UA 6 HOH 9 151 151 HOH HOH A . UA 6 HOH 10 152 152 HOH HOH A . UA 6 HOH 11 153 153 HOH HOH A . UA 6 HOH 12 154 154 HOH HOH A . UA 6 HOH 13 155 155 HOH HOH A . UA 6 HOH 14 156 156 HOH HOH A . UA 6 HOH 15 157 157 HOH HOH A . UA 6 HOH 16 158 158 HOH HOH A . UA 6 HOH 17 159 159 HOH HOH A . UA 6 HOH 18 160 160 HOH HOH A . UA 6 HOH 19 161 161 HOH HOH A . UA 6 HOH 20 162 162 HOH HOH A . UA 6 HOH 21 163 163 HOH HOH A . UA 6 HOH 22 164 164 HOH HOH A . VA 6 HOH 1 142 142 HOH HOH B . VA 6 HOH 2 143 143 HOH HOH B . VA 6 HOH 3 144 144 HOH HOH B . VA 6 HOH 4 145 145 HOH HOH B . VA 6 HOH 5 146 146 HOH HOH B . VA 6 HOH 6 147 147 HOH HOH B . VA 6 HOH 7 148 148 HOH HOH B . VA 6 HOH 8 149 149 HOH HOH B . VA 6 HOH 9 150 150 HOH HOH B . VA 6 HOH 10 151 151 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GDP 1 A GDP 1 ? G "GUANOSINE-5'-DIPHOSPHATE" 2 A CCC 88 A CCC 88 ? C ? 3 B CCC 88 B CCC 88 ? C ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,UA 2 1 B,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,VA 3 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 8560 ? 3 MORE -250 ? 3 'SSA (A^2)' 26640 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 8 ? A G 8 ? 1_555 MN ? D MN . ? A MN 109 ? 1_555 O6 ? A G 80 ? A G 80 ? 1_555 78.8 ? 2 OP2 ? A G 17 ? A G 17 ? 1_555 MN ? H MN . ? A MN 112 ? 1_555 OP2 ? A U 19 ? A U 19 ? 1_555 95.7 ? 3 OP2 ? A A 21 ? A A 21 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 150 ? 1_555 87.3 ? 4 OP2 ? A A 21 ? A A 21 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 151 ? 1_555 92.0 ? 5 O ? UA HOH . ? A HOH 150 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 151 ? 1_555 179.3 ? 6 OP2 ? A A 21 ? A A 21 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 152 ? 1_555 89.8 ? 7 O ? UA HOH . ? A HOH 150 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 152 ? 1_555 90.1 ? 8 O ? UA HOH . ? A HOH 151 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 152 ? 1_555 89.9 ? 9 OP2 ? A A 21 ? A A 21 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 153 ? 1_555 177.6 ? 10 O ? UA HOH . ? A HOH 150 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 153 ? 1_555 90.4 ? 11 O ? UA HOH . ? A HOH 151 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 153 ? 1_555 90.3 ? 12 O ? UA HOH . ? A HOH 152 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 153 ? 1_555 90.7 ? 13 OP2 ? A A 21 ? A A 21 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 154 ? 1_555 89.2 ? 14 O ? UA HOH . ? A HOH 150 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 154 ? 1_555 89.6 ? 15 O ? UA HOH . ? A HOH 151 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 154 ? 1_555 90.3 ? 16 O ? UA HOH . ? A HOH 152 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 154 ? 1_555 179.0 ? 17 O ? UA HOH . ? A HOH 153 ? 1_555 MG ? X MG . ? A MG 135 ? 1_555 O ? UA HOH . ? A HOH 154 ? 1_555 90.2 ? 18 OP1 ? A A 22 ? A A 22 ? 1_555 MN ? K MN . ? A MN 103 ? 1_555 OP2 ? A A 75 ? A A 75 ? 1_555 176.0 ? 19 "O2'" ? A G 32 ? A G 32 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 OP2 ? A A 33 ? A A 33 ? 1_555 81.1 ? 20 "O2'" ? A G 32 ? A G 32 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 OP2 ? A C 66 ? A C 66 ? 1_555 164.0 ? 21 OP2 ? A A 33 ? A A 33 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 OP2 ? A C 66 ? A C 66 ? 1_555 85.7 ? 22 "O2'" ? A G 32 ? A G 32 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 158 ? 1_555 99.4 ? 23 OP2 ? A A 33 ? A A 33 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 158 ? 1_555 168.9 ? 24 OP2 ? A C 66 ? A C 66 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 158 ? 1_555 95.4 ? 25 "O2'" ? A G 32 ? A G 32 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 159 ? 1_555 97.0 ? 26 OP2 ? A A 33 ? A A 33 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 159 ? 1_555 108.3 ? 27 OP2 ? A C 66 ? A C 66 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 159 ? 1_555 78.6 ? 28 O ? UA HOH . ? A HOH 158 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 159 ? 1_555 82.8 ? 29 "O2'" ? A G 32 ? A G 32 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 160 ? 1_555 103.4 ? 30 OP2 ? A A 33 ? A A 33 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 160 ? 1_555 85.0 ? 31 OP2 ? A C 66 ? A C 66 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 160 ? 1_555 84.2 ? 32 O ? UA HOH . ? A HOH 158 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 160 ? 1_555 84.1 ? 33 O ? UA HOH . ? A HOH 159 ? 1_555 MN ? I MN . ? A MN 102 ? 1_555 O ? UA HOH . ? A HOH 160 ? 1_555 157.2 ? 34 OP1 ? A A 34 ? A A 34 ? 1_555 MN ? G MN . ? A MN 101 ? 1_555 OP2 ? A G 35 ? A G 35 ? 1_555 77.8 ? 35 OP1 ? A A 34 ? A A 34 ? 1_555 MN ? G MN . ? A MN 101 ? 1_555 O ? UA HOH . ? A HOH 161 ? 1_555 71.1 ? 36 OP2 ? A G 35 ? A G 35 ? 1_555 MN ? G MN . ? A MN 101 ? 1_555 O ? UA HOH . ? A HOH 161 ? 1_555 76.0 ? 37 OP2 ? A C 70 ? A C 70 ? 1_555 MN ? O MN . ? A MN 105 ? 1_555 OP2 ? A A 71 ? A A 71 ? 1_555 79.1 ? 38 OP1 ? A A 75 ? A A 75 ? 1_555 MN ? M MN . ? A MN 104 ? 1_555 OP2 ? A A 76 ? A A 76 ? 1_555 78.9 ? 39 O ? UA HOH . ? A HOH 143 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 144 ? 1_555 178.9 ? 40 O ? UA HOH . ? A HOH 143 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 145 ? 1_555 89.7 ? 41 O ? UA HOH . ? A HOH 144 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 145 ? 1_555 89.5 ? 42 O ? UA HOH . ? A HOH 143 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 146 ? 1_555 89.4 ? 43 O ? UA HOH . ? A HOH 144 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 146 ? 1_555 91.2 ? 44 O ? UA HOH . ? A HOH 145 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 146 ? 1_555 89.8 ? 45 O ? UA HOH . ? A HOH 143 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 147 ? 1_555 89.6 ? 46 O ? UA HOH . ? A HOH 144 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 147 ? 1_555 89.7 ? 47 O ? UA HOH . ? A HOH 145 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 147 ? 1_555 89.6 ? 48 O ? UA HOH . ? A HOH 146 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 147 ? 1_555 178.8 ? 49 O ? UA HOH . ? A HOH 143 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 148 ? 1_555 89.7 ? 50 O ? UA HOH . ? A HOH 144 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 148 ? 1_555 91.2 ? 51 O ? UA HOH . ? A HOH 145 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 148 ? 1_555 178.9 ? 52 O ? UA HOH . ? A HOH 146 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 148 ? 1_555 91.1 ? 53 O ? UA HOH . ? A HOH 147 ? 1_555 MG ? W MG . ? A MG 133 ? 1_555 O ? UA HOH . ? A HOH 148 ? 1_555 89.5 ? 54 O ? UA HOH . ? A HOH 149 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 142 ? 1_555 90.2 ? 55 O ? UA HOH . ? A HOH 149 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 143 ? 1_555 89.0 ? 56 O ? VA HOH . ? B HOH 142 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 143 ? 1_555 178.8 ? 57 O ? UA HOH . ? A HOH 149 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 144 ? 1_555 178.9 ? 58 O ? VA HOH . ? B HOH 142 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 144 ? 1_555 89.4 ? 59 O ? VA HOH . ? B HOH 143 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 144 ? 1_555 91.4 ? 60 O ? UA HOH . ? A HOH 149 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 145 ? 1_555 89.6 ? 61 O ? VA HOH . ? B HOH 142 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 145 ? 1_555 89.8 ? 62 O ? VA HOH . ? B HOH 143 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 145 ? 1_555 89.3 ? 63 O ? VA HOH . ? B HOH 144 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 145 ? 1_555 89.3 ? 64 O ? UA HOH . ? A HOH 149 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 146 ? 1_555 89.3 ? 65 O ? VA HOH . ? B HOH 142 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 146 ? 1_555 89.6 ? 66 O ? VA HOH . ? B HOH 143 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 146 ? 1_555 91.3 ? 67 O ? VA HOH . ? B HOH 144 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 146 ? 1_555 91.7 ? 68 O ? VA HOH . ? B HOH 145 ? 1_555 MG ? OA MG . ? B MG 134 ? 1_555 O ? VA HOH . ? B HOH 146 ? 1_555 178.8 ? 69 OP2 ? B U 18 ? B U 18 ? 1_555 MN ? IA MN . ? B MN 125 ? 1_555 OP2 ? B U 20 ? B U 20 ? 1_555 84.1 ? 70 "O2'" ? B G 32 ? B G 32 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 OP2 ? B A 33 ? B A 33 ? 1_555 74.7 ? 71 "O2'" ? B G 32 ? B G 32 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 OP2 ? B C 66 ? B C 66 ? 1_555 152.8 ? 72 OP2 ? B A 33 ? B A 33 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 OP2 ? B C 66 ? B C 66 ? 1_555 84.8 ? 73 "O2'" ? B G 32 ? B G 32 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 149 ? 1_555 88.8 ? 74 OP2 ? B A 33 ? B A 33 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 149 ? 1_555 82.9 ? 75 OP2 ? B C 66 ? B C 66 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 149 ? 1_555 70.9 ? 76 "O2'" ? B G 32 ? B G 32 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 150 ? 1_555 92.5 ? 77 OP2 ? B A 33 ? B A 33 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 150 ? 1_555 94.1 ? 78 OP2 ? B C 66 ? B C 66 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 150 ? 1_555 106.7 ? 79 O ? VA HOH . ? B HOH 149 ? 1_555 MN ? MA MN . ? B MN 129 ? 1_555 O ? VA HOH . ? B HOH 150 ? 1_555 176.3 ? 80 OP1 ? B A 34 ? B A 34 ? 1_555 MN ? FA MN . ? B MN 122 ? 1_555 OP2 ? B G 35 ? B G 35 ? 1_555 69.5 ? 81 OP1 ? B A 34 ? B A 34 ? 1_555 MN ? FA MN . ? B MN 122 ? 1_555 O ? VA HOH . ? B HOH 151 ? 1_555 77.1 ? 82 OP2 ? B G 35 ? B G 35 ? 1_555 MN ? FA MN . ? B MN 122 ? 1_555 O ? VA HOH . ? B HOH 151 ? 1_555 77.2 ? 83 OP2 ? B C 70 ? B C 70 ? 1_555 MN ? KA MN . ? B MN 127 ? 1_555 OP2 ? B A 71 ? B A 71 ? 1_555 73.4 ? 84 OP1 ? B C 74 ? B C 74 ? 1_555 MN ? DA MN . ? B MN 120 ? 1_555 OP1 ? B A 75 ? B A 75 ? 1_555 79.9 ? 85 OP1 ? B C 74 ? B C 74 ? 1_555 MN ? DA MN . ? B MN 120 ? 1_555 OP2 ? B A 76 ? B A 76 ? 1_555 160.4 ? 86 OP1 ? B A 75 ? B A 75 ? 1_555 MN ? DA MN . ? B MN 120 ? 1_555 OP2 ? B A 76 ? B A 76 ? 1_555 83.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 3 'Structure model' '_struct_ref_seq_dif.details' 40 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -5.1090 -46.3140 10.6560 0.0804 0.6142 0.3816 -0.0022 -0.0313 -0.1389 2.7396 0.0734 0.2528 0.3840 -0.6534 -0.1248 -0.1303 0.5962 -0.5317 -0.0271 0.0274 -0.0307 0.0093 -0.0914 0.1030 'X-RAY DIFFRACTION' 2 ? refined -5.3250 -26.0320 22.7600 0.3086 0.4073 0.2919 0.0137 0.0075 0.0503 0.6799 0.1130 0.4866 0.0416 -0.4299 -0.0562 0.0917 0.0595 0.1531 -0.0073 0.0494 0.0859 -0.2454 -0.1274 -0.1411 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -10 ? ? A 9999 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B -10 ? ? B 9999 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 REFMAC refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 REFMAC phasing . ? 5 # _pdbx_entry_details.entry_id 3OXE _pdbx_entry_details.nonpolymer_details 'THE ORIGINAL MG AND MN CHAIN IDS HAVE BEEN CHANGED TO THE CLOSEST POLYMER CHAIN. 100 HAS BEEN ADDED TO THE ORIGINAL RESIDUE NUMBER.' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OXT _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 89 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 150 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A G 38 ? ? "C2'" A G 38 ? ? "C1'" A G 38 ? ? 95.42 101.30 -5.88 0.70 N 2 1 "C3'" A G 38 ? ? "O3'" A G 38 ? ? P A C 39 ? ? 127.53 119.70 7.83 1.20 Y 3 1 "O4'" A C 39 ? ? "C1'" A C 39 ? ? N1 A C 39 ? ? 112.77 108.50 4.27 0.70 N 4 1 "C3'" A A 65 ? ? "O3'" A A 65 ? ? P A C 66 ? ? 127.59 119.70 7.89 1.20 Y 5 1 "C3'" B A 65 ? ? "O3'" B A 65 ? ? P B C 66 ? ? 127.39 119.70 7.69 1.20 Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 GDP PB P N N 148 GDP O1B O N N 149 GDP O2B O N N 150 GDP O3B O N N 151 GDP O3A O N N 152 GDP PA P N N 153 GDP O1A O N N 154 GDP O2A O N N 155 GDP "O5'" O N N 156 GDP "C5'" C N N 157 GDP "C4'" C N R 158 GDP "O4'" O N N 159 GDP "C3'" C N S 160 GDP "O3'" O N N 161 GDP "C2'" C N R 162 GDP "O2'" O N N 163 GDP "C1'" C N R 164 GDP N9 N Y N 165 GDP C8 C Y N 166 GDP N7 N Y N 167 GDP C5 C Y N 168 GDP C6 C N N 169 GDP O6 O N N 170 GDP N1 N N N 171 GDP C2 C N N 172 GDP N2 N N N 173 GDP N3 N N N 174 GDP C4 C Y N 175 GDP HOB2 H N N 176 GDP HOB3 H N N 177 GDP HOA2 H N N 178 GDP "H5'" H N N 179 GDP "H5''" H N N 180 GDP "H4'" H N N 181 GDP "H3'" H N N 182 GDP "HO3'" H N N 183 GDP "H2'" H N N 184 GDP "HO2'" H N N 185 GDP "H1'" H N N 186 GDP H8 H N N 187 GDP HN1 H N N 188 GDP HN21 H N N 189 GDP HN22 H N N 190 GLY N N N N 191 GLY CA C N N 192 GLY C C N N 193 GLY O O N N 194 GLY OXT O N N 195 GLY H H N N 196 GLY H2 H N N 197 GLY HA2 H N N 198 GLY HA3 H N N 199 GLY HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 MG MG MG N N 204 MN MN MN N N 205 U OP3 O N N 206 U P P N N 207 U OP1 O N N 208 U OP2 O N N 209 U "O5'" O N N 210 U "C5'" C N N 211 U "C4'" C N R 212 U "O4'" O N N 213 U "C3'" C N S 214 U "O3'" O N N 215 U "C2'" C N R 216 U "O2'" O N N 217 U "C1'" C N R 218 U N1 N N N 219 U C2 C N N 220 U O2 O N N 221 U N3 N N N 222 U C4 C N N 223 U O4 O N N 224 U C5 C N N 225 U C6 C N N 226 U HOP3 H N N 227 U HOP2 H N N 228 U "H5'" H N N 229 U "H5''" H N N 230 U "H4'" H N N 231 U "H3'" H N N 232 U "HO3'" H N N 233 U "H2'" H N N 234 U "HO2'" H N N 235 U "H1'" H N N 236 U H3 H N N 237 U H5 H N N 238 U H6 H N N 239 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 GDP PB O1B doub N N 155 GDP PB O2B sing N N 156 GDP PB O3B sing N N 157 GDP PB O3A sing N N 158 GDP O2B HOB2 sing N N 159 GDP O3B HOB3 sing N N 160 GDP O3A PA sing N N 161 GDP PA O1A doub N N 162 GDP PA O2A sing N N 163 GDP PA "O5'" sing N N 164 GDP O2A HOA2 sing N N 165 GDP "O5'" "C5'" sing N N 166 GDP "C5'" "C4'" sing N N 167 GDP "C5'" "H5'" sing N N 168 GDP "C5'" "H5''" sing N N 169 GDP "C4'" "O4'" sing N N 170 GDP "C4'" "C3'" sing N N 171 GDP "C4'" "H4'" sing N N 172 GDP "O4'" "C1'" sing N N 173 GDP "C3'" "O3'" sing N N 174 GDP "C3'" "C2'" sing N N 175 GDP "C3'" "H3'" sing N N 176 GDP "O3'" "HO3'" sing N N 177 GDP "C2'" "O2'" sing N N 178 GDP "C2'" "C1'" sing N N 179 GDP "C2'" "H2'" sing N N 180 GDP "O2'" "HO2'" sing N N 181 GDP "C1'" N9 sing N N 182 GDP "C1'" "H1'" sing N N 183 GDP N9 C8 sing Y N 184 GDP N9 C4 sing Y N 185 GDP C8 N7 doub Y N 186 GDP C8 H8 sing N N 187 GDP N7 C5 sing Y N 188 GDP C5 C6 sing N N 189 GDP C5 C4 doub Y N 190 GDP C6 O6 doub N N 191 GDP C6 N1 sing N N 192 GDP N1 C2 sing N N 193 GDP N1 HN1 sing N N 194 GDP C2 N2 sing N N 195 GDP C2 N3 doub N N 196 GDP N2 HN21 sing N N 197 GDP N2 HN22 sing N N 198 GDP N3 C4 sing N N 199 GLY N CA sing N N 200 GLY N H sing N N 201 GLY N H2 sing N N 202 GLY CA C sing N N 203 GLY CA HA2 sing N N 204 GLY CA HA3 sing N N 205 GLY C O doub N N 206 GLY C OXT sing N N 207 GLY OXT HXT sing N N 208 HOH O H1 sing N N 209 HOH O H2 sing N N 210 U OP3 P sing N N 211 U OP3 HOP3 sing N N 212 U P OP1 doub N N 213 U P OP2 sing N N 214 U P "O5'" sing N N 215 U OP2 HOP2 sing N N 216 U "O5'" "C5'" sing N N 217 U "C5'" "C4'" sing N N 218 U "C5'" "H5'" sing N N 219 U "C5'" "H5''" sing N N 220 U "C4'" "O4'" sing N N 221 U "C4'" "C3'" sing N N 222 U "C4'" "H4'" sing N N 223 U "O4'" "C1'" sing N N 224 U "C3'" "O3'" sing N N 225 U "C3'" "C2'" sing N N 226 U "C3'" "H3'" sing N N 227 U "O3'" "HO3'" sing N N 228 U "C2'" "O2'" sing N N 229 U "C2'" "C1'" sing N N 230 U "C2'" "H2'" sing N N 231 U "O2'" "HO2'" sing N N 232 U "C1'" N1 sing N N 233 U "C1'" "H1'" sing N N 234 U N1 C2 sing N N 235 U N1 C6 sing N N 236 U C2 O2 doub N N 237 U C2 N3 sing N N 238 U N3 C4 sing N N 239 U N3 H3 sing N N 240 U C4 O4 doub N N 241 U C4 C5 sing N N 242 U C5 C6 doub N N 243 U C5 H5 sing N N 244 U C6 H6 sing N N 245 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3OXE 'double helix' 3OXE 'a-form double helix' 3OXE 'hairpin loop' 3OXE tetraloop 3OXE 'bulge loop' 3OXE 'mismatched base pair' 3OXE 'internal loop' 3OXE 'quadruple helix' 3OXE 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GDP 1 1_555 A CCC 88 1_555 -0.976 0.163 -0.135 -3.548 -1.854 -0.055 1 A_GDP1:CCC88_A A 1 ? A 88 ? ? 1 1 A G 2 1_555 A U 87 1_555 -1.738 -0.298 0.002 7.790 -14.022 -3.304 2 A_G2:U87_A A 2 ? A 87 ? 28 1 1 A C 3 1_555 A G 86 1_555 -0.250 0.024 -0.547 18.190 -22.989 3.682 3 A_C3:G86_A A 3 ? A 86 ? 19 1 1 A U 4 1_555 A A 85 1_555 -0.159 0.061 -0.152 6.639 -9.473 7.192 4 A_U4:A85_A A 4 ? A 85 ? 20 1 1 A C 5 1_555 A G 84 1_555 0.214 0.024 -0.557 8.125 -10.697 5.472 5 A_C5:G84_A A 5 ? A 84 ? 19 1 1 A U 6 1_555 A A 83 1_555 0.222 -0.049 -0.247 5.952 -10.588 14.609 6 A_U6:A83_A A 6 ? A 83 ? 20 1 1 A G 7 1_555 A C 82 1_555 0.132 -0.101 -0.212 -3.321 -6.690 1.809 7 A_G7:C82_A A 7 ? A 82 ? 19 1 1 A G 8 1_555 A A 81 1_555 7.076 -4.980 0.494 13.223 -1.978 -8.921 8 A_G8:A81_A A 8 ? A 81 ? ? 10 1 A A 9 1_555 A G 80 1_555 -7.218 -5.028 0.845 -18.540 -17.181 -21.243 9 A_A9:G80_A A 9 ? A 80 ? ? ? 1 A G 10 1_555 A G 79 1_555 -5.313 1.340 1.317 -2.674 -11.777 -35.953 10 A_G10:G79_A A 10 ? A 79 ? ? ? 1 A C 24 1_555 A G 17 1_555 -0.229 0.097 -0.131 8.100 -17.448 4.077 11 A_C24:G17_A A 24 ? A 17 ? 19 1 1 A G 25 1_555 A C 16 1_555 -0.283 -0.091 -0.140 1.471 -14.636 4.518 12 A_G25:C16_A A 25 ? A 16 ? 19 1 1 A G 26 1_555 A C 15 1_555 -0.958 -0.371 -0.204 -15.759 -23.985 1.668 13 A_G26:C15_A A 26 ? A 15 ? 19 1 1 A U 27 1_555 A A 14 1_555 0.407 -0.101 0.029 -8.481 -16.112 2.984 14 A_U27:A14_A A 27 ? A 14 ? 20 1 1 A C 28 1_555 A G 12 1_555 0.033 -0.177 -0.210 3.287 -13.649 0.049 15 A_C28:G12_A A 28 ? A 12 ? 19 1 1 A G 29 1_555 A C 74 1_555 -0.146 -0.185 -0.211 -1.958 -11.312 -2.096 16 A_G29:C74_A A 29 ? A 74 ? 19 1 1 A C 30 1_555 A G 73 1_555 -0.164 0.130 -0.025 7.345 -20.783 6.857 17 A_C30:G73_A A 30 ? A 73 ? 19 1 1 A C 31 1_555 A G 72 1_555 0.387 -0.137 0.289 -8.479 -4.175 0.735 18 A_C31:G72_A A 31 ? A 72 ? 19 1 1 A G 32 1_555 A A 71 1_555 2.792 -5.901 0.344 2.008 -8.938 119.430 19 A_G32:A71_A A 32 ? A 71 ? ? 3 1 A C 68 1_555 A G 36 1_555 0.414 -0.098 0.353 -12.461 -5.705 -1.178 20 A_C68:G36_A A 68 ? A 36 ? 19 1 1 A A 37 1_555 A U 67 1_555 -0.347 0.106 0.108 3.058 -27.563 18.979 21 A_A37:U67_A A 37 ? A 67 ? ? 1 1 A G 38 1_555 A C 66 1_555 -0.232 -0.176 0.298 -9.564 -6.045 -3.717 22 A_G38:C66_A A 38 ? A 66 ? 19 1 1 A C 39 1_555 A A 64 1_555 3.188 -0.670 0.059 18.318 -4.616 -85.234 23 A_C39:A64_A A 39 ? A 64 ? 25 4 1 A A 41 1_555 A G 62 1_555 -6.752 -4.223 0.279 9.440 -7.584 -3.607 24 A_A41:G62_A A 41 ? A 62 ? 11 10 1 A G 42 1_555 A U 61 1_555 -2.455 -0.321 0.319 16.550 -5.271 6.481 25 A_G42:U61_A A 42 ? A 61 ? 28 1 1 A C 43 1_555 A G 60 1_555 0.053 -0.227 -0.024 15.748 -12.982 -3.295 26 A_C43:G60_A A 43 ? A 60 ? 19 1 1 A U 44 1_555 A A 59 1_555 -0.269 -0.264 0.099 5.256 -8.586 -2.841 27 A_U44:A59_A A 44 ? A 59 ? 20 1 1 A C 45 1_555 A G 58 1_555 0.736 -0.399 0.076 2.459 -15.474 -3.916 28 A_C45:G58_A A 45 ? A 58 ? 19 1 1 A U 46 1_555 A A 57 1_555 0.107 -0.213 0.212 -1.639 -11.409 4.340 29 A_U46:A57_A A 46 ? A 57 ? 20 1 1 A G 47 1_555 A C 56 1_555 -0.409 -0.077 -0.363 -9.522 -16.435 5.496 30 A_G47:C56_A A 47 ? A 56 ? 19 1 1 A C 48 1_555 A G 55 1_555 0.302 -0.132 -0.400 3.548 -15.500 6.167 31 A_C48:G55_A A 48 ? A 55 ? 19 1 1 A G 49 1_555 A C 54 1_555 -0.200 -0.047 -0.079 2.231 -5.823 5.104 32 A_G49:C54_A A 49 ? A 54 ? 19 1 1 A G 50 1_555 A A 53 1_555 7.519 -5.386 1.131 14.675 -13.624 -13.437 33 A_G50:A53_A A 50 ? A 53 ? ? ? 1 B G 1 1_555 B CCC 88 1_555 -0.476 -0.163 -0.302 -9.940 -2.150 -3.352 34 B_G1:CCC88_B B 1 ? B 88 ? 19 1 1 B G 2 1_555 B U 87 1_555 -2.731 -0.459 0.303 8.390 -9.622 10.526 35 B_G2:U87_B B 2 ? B 87 ? 28 1 1 B C 3 1_555 B G 86 1_555 -0.373 -0.157 -0.101 14.421 -16.986 -1.494 36 B_C3:G86_B B 3 ? B 86 ? 19 1 1 B U 4 1_555 B A 85 1_555 -0.181 -0.115 0.000 5.699 -11.273 1.873 37 B_U4:A85_B B 4 ? B 85 ? 20 1 1 B C 5 1_555 B G 84 1_555 0.365 -0.002 -0.268 4.720 -11.412 3.692 38 B_C5:G84_B B 5 ? B 84 ? 19 1 1 B U 6 1_555 B A 83 1_555 0.094 -0.075 -0.163 3.187 -15.322 14.309 39 B_U6:A83_B B 6 ? B 83 ? 20 1 1 B G 7 1_555 B C 82 1_555 -0.178 -0.190 -0.167 -4.580 -8.916 0.980 40 B_G7:C82_B B 7 ? B 82 ? 19 1 1 B G 8 1_555 B A 81 1_555 7.126 -5.023 0.487 8.223 -6.969 -13.041 41 B_G8:A81_B B 8 ? B 81 ? ? 10 1 B A 9 1_555 B G 80 1_555 -7.098 -5.112 1.291 -18.906 -11.923 -16.106 42 B_A9:G80_B B 9 ? B 80 ? ? ? 1 B G 10 1_555 B G 79 1_555 -5.481 1.412 0.806 -1.136 -8.174 -23.664 43 B_G10:G79_B B 10 ? B 79 ? ? ? 1 B C 24 1_555 B G 17 1_555 -0.361 0.068 -0.042 9.315 -15.416 5.217 44 B_C24:G17_B B 24 ? B 17 ? 19 1 1 B G 25 1_555 B C 16 1_555 -0.487 -0.127 -0.240 -0.520 -15.572 1.702 45 B_G25:C16_B B 25 ? B 16 ? 19 1 1 B G 26 1_555 B C 15 1_555 -0.448 -0.161 0.079 -10.784 -20.632 5.013 46 B_G26:C15_B B 26 ? B 15 ? 19 1 1 B U 27 1_555 B A 14 1_555 -0.065 -0.104 0.077 -8.343 -16.390 -2.607 47 B_U27:A14_B B 27 ? B 14 ? 20 1 1 B C 28 1_555 B G 12 1_555 0.512 -0.203 -0.194 -2.477 -9.775 4.013 48 B_C28:G12_B B 28 ? B 12 ? 19 1 1 B G 29 1_555 B C 74 1_555 -0.219 -0.239 -0.234 -4.163 -11.782 -2.631 49 B_G29:C74_B B 29 ? B 74 ? 19 1 1 B C 30 1_555 B G 73 1_555 0.301 -0.216 -0.187 8.728 -22.739 2.898 50 B_C30:G73_B B 30 ? B 73 ? 19 1 1 B C 31 1_555 B G 72 1_555 0.198 -0.122 0.258 -8.427 -9.033 -0.102 51 B_C31:G72_B B 31 ? B 72 ? 19 1 1 B G 32 1_555 B A 71 1_555 2.622 -6.040 0.513 5.599 -5.878 119.271 52 B_G32:A71_B B 32 ? B 71 ? ? 3 1 B G 35 1_555 B C 70 1_555 -0.442 -0.333 -0.331 -2.142 5.950 -3.724 53 B_G35:C70_B B 35 ? B 70 ? 19 1 1 B G 36 1_555 B C 68 1_555 -0.259 -0.025 0.435 14.622 -9.622 1.688 54 B_G36:C68_B B 36 ? B 68 ? 19 1 1 B A 37 1_555 B U 67 1_555 0.116 0.363 0.254 4.010 -29.743 25.249 55 B_A37:U67_B B 37 ? B 67 ? ? 1 1 B G 38 1_555 B C 66 1_555 0.236 -0.194 0.170 -16.039 -11.526 -1.408 56 B_G38:C66_B B 38 ? B 66 ? 19 1 1 B C 39 1_555 B A 64 1_555 2.923 -0.225 0.262 15.899 -0.106 -90.960 57 B_C39:A64_B B 39 ? B 64 ? 25 4 1 B G 42 1_555 B U 61 1_555 -2.853 -0.790 -0.174 9.889 -2.454 -2.429 58 B_G42:U61_B B 42 ? B 61 ? 28 1 1 B C 43 1_555 B G 60 1_555 0.331 -0.175 -0.275 10.454 -13.032 0.835 59 B_C43:G60_B B 43 ? B 60 ? 19 1 1 B U 44 1_555 B A 59 1_555 0.270 -0.056 -0.308 5.184 -8.092 -3.808 60 B_U44:A59_B B 44 ? B 59 ? 20 1 1 B C 45 1_555 B G 58 1_555 0.286 0.450 0.369 1.108 -13.833 9.742 61 B_C45:G58_B B 45 ? B 58 ? ? 1 1 B U 46 1_555 B A 57 1_555 -0.158 0.013 0.268 0.503 -10.757 4.563 62 B_U46:A57_B B 46 ? B 57 ? 20 1 1 B G 47 1_555 B C 56 1_555 -0.060 0.195 -0.027 -4.639 -10.227 7.506 63 B_G47:C56_B B 47 ? B 56 ? 19 1 1 B C 48 1_555 B G 55 1_555 0.117 -0.110 0.160 3.129 -7.772 2.466 64 B_C48:G55_B B 48 ? B 55 ? 19 1 1 B G 49 1_555 B C 54 1_555 0.078 -0.227 -0.475 2.619 0.415 -0.094 65 B_G49:C54_B B 49 ? B 54 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GDP 1 1_555 A CCC 88 1_555 A G 2 1_555 A U 87 1_555 -0.031 -2.140 3.047 -7.479 2.255 32.409 -4.075 -1.081 2.833 3.969 13.162 33.313 1 AA_GDP1G2:U87CCC88_AA A 1 ? A 88 ? A 2 ? A 87 ? 1 A G 2 1_555 A U 87 1_555 A C 3 1_555 A G 86 1_555 -0.611 -1.947 3.035 -0.628 3.088 29.399 -4.404 1.077 2.833 6.064 1.232 29.564 2 AA_G2C3:G86U87_AA A 2 ? A 87 ? A 3 ? A 86 ? 1 A C 3 1_555 A G 86 1_555 A U 4 1_555 A A 85 1_555 -0.465 -1.612 3.563 -7.877 14.312 31.899 -4.714 -0.390 2.661 24.163 13.298 35.742 3 AA_C3U4:A85G86_AA A 3 ? A 86 ? A 4 ? A 85 ? 1 A U 4 1_555 A A 85 1_555 A C 5 1_555 A G 84 1_555 -0.246 -1.566 3.146 1.271 10.854 30.308 -4.535 0.644 2.442 19.962 -2.338 32.175 4 AA_U4C5:G84A85_AA A 4 ? A 85 ? A 5 ? A 84 ? 1 A C 5 1_555 A G 84 1_555 A U 6 1_555 A A 83 1_555 0.907 -1.482 3.342 -1.834 12.166 30.602 -4.548 -1.892 2.528 21.969 3.312 32.927 5 AA_C5U6:A83G84_AA A 5 ? A 84 ? A 6 ? A 83 ? 1 A U 6 1_555 A A 83 1_555 A G 7 1_555 A C 82 1_555 -1.077 -1.508 3.503 1.552 10.718 31.973 -4.329 2.107 2.812 18.797 -2.721 33.712 6 AA_U6G7:C82A83_AA A 6 ? A 83 ? A 7 ? A 82 ? 1 A G 7 1_555 A C 82 1_555 A G 8 1_555 A A 81 1_555 -0.925 -0.884 2.885 -1.382 9.487 58.049 -1.326 0.881 2.742 9.704 1.413 58.767 7 AA_G7G8:A81C82_AA A 7 ? A 82 ? A 8 ? A 81 ? 1 A G 8 1_555 A A 81 1_555 A A 9 1_555 A G 80 1_555 -0.905 -0.025 5.567 -0.979 14.492 -27.684 -4.660 -2.000 4.937 -27.980 -1.890 -31.197 8 AA_G8A9:G80A81_AA A 8 ? A 81 ? A 9 ? A 80 ? 1 A A 9 1_555 A G 80 1_555 A G 10 1_555 A G 79 1_555 -1.009 -1.072 3.117 0.283 -2.986 46.541 -1.114 1.298 3.170 -3.775 -0.358 46.632 9 AA_A9G10:G79G80_AA A 9 ? A 80 ? A 10 ? A 79 ? 1 A C 24 1_555 A G 17 1_555 A G 25 1_555 A C 16 1_555 -0.476 -1.656 3.440 -5.759 13.662 31.004 -4.881 -0.067 2.554 23.919 10.083 34.287 10 AA_C24G25:C16G17_AA A 24 ? A 17 ? A 25 ? A 16 ? 1 A G 25 1_555 A C 16 1_555 A G 26 1_555 A C 15 1_555 0.373 -2.123 3.534 -0.415 13.734 27.870 -6.445 -0.772 2.257 26.568 0.802 31.013 11 AA_G25G26:C15C16_AA A 25 ? A 16 ? A 26 ? A 15 ? 1 A G 26 1_555 A C 15 1_555 A U 27 1_555 A A 14 1_555 0.391 -1.645 3.068 3.266 3.793 39.607 -2.812 -0.226 2.926 5.570 -4.797 39.909 12 AA_G26U27:A14C15_AA A 26 ? A 15 ? A 27 ? A 14 ? 1 A U 27 1_555 A A 14 1_555 A C 28 1_555 A G 12 1_555 -0.583 -1.550 2.980 5.130 5.683 11.025 -11.153 6.573 1.574 25.876 -23.356 13.416 13 AA_U27C28:G12A14_AA A 27 ? A 14 ? A 28 ? A 12 ? 1 A C 28 1_555 A G 12 1_555 A G 29 1_555 A C 74 1_555 0.815 -2.310 3.468 -1.552 13.319 32.446 -5.684 -1.570 2.329 22.666 2.642 35.039 14 AA_C28G29:C74G12_AA A 28 ? A 12 ? A 29 ? A 74 ? 1 A G 29 1_555 A C 74 1_555 A C 30 1_555 A G 73 1_555 1.519 -2.195 2.908 2.320 5.796 28.923 -5.335 -2.562 2.541 11.436 -4.579 29.575 15 AA_G29C30:G73C74_AA A 29 ? A 74 ? A 30 ? A 73 ? 1 A C 30 1_555 A G 73 1_555 A C 31 1_555 A G 72 1_555 -0.668 -1.958 3.627 -3.468 6.402 36.217 -4.017 0.555 3.293 10.173 5.511 36.918 16 AA_C30C31:G72G73_AA A 30 ? A 73 ? A 31 ? A 72 ? 1 A C 31 1_555 A G 72 1_555 A G 32 1_555 A A 71 1_555 -0.328 -2.914 0.556 -170.784 8.143 107.445 -1.467 -0.018 0.560 4.113 86.263 174.666 17 AA_C31G32:A71G72_AA A 31 ? A 72 ? A 32 ? A 71 ? 1 A G 32 1_555 A A 71 1_555 A C 68 1_555 A G 36 1_555 -2.324 0.570 -6.484 -11.680 2.187 -154.609 -0.278 -1.114 -6.538 -1.121 -5.985 -154.748 18 AA_G32C68:G36A71_AA A 32 ? A 71 ? A 68 ? A 36 ? 1 A A 37 1_555 A U 67 1_555 A G 38 1_555 A C 66 1_555 -1.309 -1.582 3.418 -3.509 7.329 38.530 -3.236 1.519 3.179 10.959 5.246 39.345 19 AA_A37G38:C66U67_AA A 37 ? A 67 ? A 38 ? A 66 ? 1 A G 38 1_555 A C 66 1_555 A C 39 1_555 A A 64 1_555 -2.657 -1.438 2.950 3.919 3.707 59.327 -1.610 2.845 2.700 3.737 -3.950 59.549 20 AA_G38C39:A64C66_AA A 38 ? A 66 ? A 39 ? A 64 ? 1 A A 41 1_555 A G 62 1_555 A G 42 1_555 A U 61 1_555 0.467 -0.579 3.310 -9.426 8.763 50.279 -1.246 -1.162 3.049 10.124 10.890 51.796 21 AA_A41G42:U61G62_AA A 41 ? A 62 ? A 42 ? A 61 ? 1 A G 42 1_555 A U 61 1_555 A C 43 1_555 A G 60 1_555 -0.395 -0.998 3.305 -0.590 4.989 45.926 -1.696 0.453 3.190 6.372 0.753 46.186 22 AA_G42C43:G60U61_AA A 42 ? A 61 ? A 43 ? A 60 ? 1 A C 43 1_555 A G 60 1_555 A U 44 1_555 A A 59 1_555 -0.113 -2.216 3.396 -3.363 8.830 29.607 -5.743 -0.399 2.639 16.750 6.380 31.047 23 AA_C43U44:A59G60_AA A 43 ? A 60 ? A 44 ? A 59 ? 1 A U 44 1_555 A A 59 1_555 A C 45 1_555 A G 58 1_555 -0.334 -1.619 3.298 -1.689 5.651 38.291 -3.117 0.301 3.049 8.552 2.557 38.726 24 AA_U44C45:G58A59_AA A 44 ? A 59 ? A 45 ? A 58 ? 1 A C 45 1_555 A G 58 1_555 A U 46 1_555 A A 57 1_555 -0.242 -1.628 3.233 -2.433 7.439 29.039 -4.561 0.002 2.751 14.505 4.744 30.053 25 AA_C45U46:A57G58_AA A 45 ? A 58 ? A 46 ? A 57 ? 1 A U 46 1_555 A A 57 1_555 A G 47 1_555 A C 56 1_555 -0.258 -1.316 3.205 1.022 16.446 29.785 -4.581 0.587 2.191 29.339 -1.823 33.949 26 AA_U46G47:C56A57_AA A 46 ? A 57 ? A 47 ? A 56 ? 1 A G 47 1_555 A C 56 1_555 A C 48 1_555 A G 55 1_555 0.217 -1.126 2.930 0.519 6.807 32.522 -2.953 -0.305 2.650 11.989 -0.914 33.212 27 AA_G47C48:G55C56_AA A 47 ? A 56 ? A 48 ? A 55 ? 1 A C 48 1_555 A G 55 1_555 A G 49 1_555 A C 54 1_555 0.374 -1.668 3.282 -0.922 14.334 27.775 -5.512 -0.851 2.167 27.642 1.778 31.204 28 AA_C48G49:C54G55_AA A 48 ? A 55 ? A 49 ? A 54 ? 1 A G 49 1_555 A C 54 1_555 A G 50 1_555 A A 53 1_555 -1.653 -0.929 3.008 -1.382 12.952 50.601 -1.828 1.798 2.750 14.872 1.587 52.143 29 AA_G49G50:A53C54_AA A 49 ? A 54 ? A 50 ? A 53 ? 1 B G 1 1_555 B CCC 88 1_555 B G 2 1_555 B U 87 1_555 0.702 -2.139 2.718 -5.985 3.572 23.679 -5.833 -3.029 2.137 8.471 14.196 24.670 30 BB_G1G2:U87CCC88_BB B 1 ? B 88 ? B 2 ? B 87 ? 1 B G 2 1_555 B U 87 1_555 B C 3 1_555 B G 86 1_555 -0.788 -1.359 3.149 -0.260 3.968 38.662 -2.498 1.154 3.006 5.975 0.391 38.858 31 BB_G2C3:G86U87_BB B 2 ? B 87 ? B 3 ? B 86 ? 1 B C 3 1_555 B G 86 1_555 B U 4 1_555 B A 85 1_555 -0.148 -1.761 3.425 -4.145 8.561 32.991 -4.310 -0.389 2.889 14.700 7.117 34.298 32 BB_C3U4:A85G86_BB B 3 ? B 86 ? B 4 ? B 85 ? 1 B U 4 1_555 B A 85 1_555 B C 5 1_555 B G 84 1_555 -0.248 -1.595 3.230 0.128 9.477 33.120 -4.059 0.438 2.685 16.216 -0.219 34.413 33 BB_U4C5:G84A85_BB B 4 ? B 85 ? B 5 ? B 84 ? 1 B C 5 1_555 B G 84 1_555 B U 6 1_555 B A 83 1_555 0.850 -1.510 3.186 0.017 13.931 28.957 -4.927 -1.535 2.242 26.043 -0.032 32.069 34 BB_C5U6:A83G84_BB B 5 ? B 84 ? B 6 ? B 83 ? 1 B U 6 1_555 B A 83 1_555 B G 7 1_555 B C 82 1_555 -1.018 -1.484 3.407 0.148 11.122 31.268 -4.412 1.809 2.729 19.865 -0.264 33.141 35 BB_U6G7:C82A83_BB B 6 ? B 83 ? B 7 ? B 82 ? 1 B G 7 1_555 B C 82 1_555 B G 8 1_555 B A 81 1_555 -1.076 -0.897 3.058 -1.017 7.663 60.675 -1.219 1.014 2.952 7.552 1.003 61.119 36 BB_G7G8:A81C82_BB B 7 ? B 82 ? B 8 ? B 81 ? 1 B G 8 1_555 B A 81 1_555 B A 9 1_555 B G 80 1_555 -0.223 -0.118 5.611 -2.447 9.913 -28.690 -3.194 -1.270 5.319 -19.251 -4.752 -30.416 37 BB_G8A9:G80A81_BB B 8 ? B 81 ? B 9 ? B 80 ? 1 B A 9 1_555 B G 80 1_555 B G 10 1_555 B G 79 1_555 -0.709 -0.965 3.066 1.509 3.965 43.982 -1.625 1.073 2.947 5.280 -2.009 44.176 38 BB_A9G10:G79G80_BB B 9 ? B 80 ? B 10 ? B 79 ? 1 B C 24 1_555 B G 17 1_555 B G 25 1_555 B C 16 1_555 -0.605 -1.701 3.519 -2.592 11.885 31.213 -4.906 0.626 2.747 21.111 4.605 33.445 39 BB_C24G25:C16G17_BB B 24 ? B 17 ? B 25 ? B 16 ? 1 B G 25 1_555 B C 16 1_555 B G 26 1_555 B C 15 1_555 0.717 -2.098 3.379 -0.388 9.597 28.474 -5.887 -1.458 2.543 18.845 0.762 30.019 40 BB_G25G26:C15C16_BB B 25 ? B 16 ? B 26 ? B 15 ? 1 B G 26 1_555 B C 15 1_555 B U 27 1_555 B A 14 1_555 -1.050 -1.438 3.037 -2.555 6.665 36.434 -3.064 1.342 2.805 10.536 4.039 37.103 41 BB_G26U27:A14C15_BB B 26 ? B 15 ? B 27 ? B 14 ? 1 B U 27 1_555 B A 14 1_555 B C 28 1_555 B G 12 1_555 -0.350 -1.062 3.056 2.872 3.918 26.820 -3.142 1.394 2.823 8.360 -6.127 27.248 42 BB_U27C28:G12A14_BB B 27 ? B 14 ? B 28 ? B 12 ? 1 B C 28 1_555 B G 12 1_555 B G 29 1_555 B C 74 1_555 0.678 -1.447 3.256 0.784 13.913 33.963 -4.054 -0.981 2.506 22.670 -1.278 36.632 43 BB_C28G29:C74G12_BB B 28 ? B 12 ? B 29 ? B 74 ? 1 B G 29 1_555 B C 74 1_555 B C 30 1_555 B G 73 1_555 1.265 -2.218 2.893 3.099 5.064 29.829 -5.090 -1.885 2.605 9.716 -5.947 30.401 44 BB_G29C30:G73C74_BB B 29 ? B 74 ? B 30 ? B 73 ? 1 B C 30 1_555 B G 73 1_555 B C 31 1_555 B G 72 1_555 -0.367 -1.986 3.606 -2.070 8.460 34.537 -4.526 0.289 3.066 13.975 3.419 35.586 45 BB_C30C31:G72G73_BB B 30 ? B 73 ? B 31 ? B 72 ? 1 B C 31 1_555 B G 72 1_555 B G 32 1_555 B A 71 1_555 -0.367 -3.021 0.505 -169.053 8.704 97.715 -1.523 -0.008 0.519 4.420 85.844 172.951 46 BB_C31G32:A71G72_BB B 31 ? B 72 ? B 32 ? B 71 ? 1 B G 32 1_555 B A 71 1_555 B G 35 1_555 B C 70 1_555 -2.581 -2.656 -5.728 101.441 -141.351 120.810 -2.442 0.492 -4.660 -70.994 -50.949 177.030 47 BB_G32G35:C70A71_BB B 32 ? B 71 ? B 35 ? B 70 ? 1 B G 35 1_555 B C 70 1_555 B G 36 1_555 B C 68 1_555 2.729 -1.828 2.888 -10.358 6.033 48.494 -2.506 -3.818 2.073 7.217 12.392 49.866 48 BB_G35G36:C68C70_BB B 35 ? B 70 ? B 36 ? B 68 ? 1 B G 36 1_555 B C 68 1_555 B A 37 1_555 B U 67 1_555 1.178 -1.335 3.434 3.595 7.349 36.494 -3.080 -1.350 3.212 11.557 -5.653 37.369 49 BB_G36A37:U67C68_BB B 36 ? B 68 ? B 37 ? B 67 ? 1 B A 37 1_555 B U 67 1_555 B G 38 1_555 B C 66 1_555 -1.373 -1.575 3.646 -1.361 9.737 37.861 -3.604 1.878 3.205 14.706 2.056 39.071 50 BB_A37G38:C66U67_BB B 37 ? B 67 ? B 38 ? B 66 ? 1 B G 38 1_555 B C 66 1_555 B C 39 1_555 B A 64 1_555 -2.945 -1.449 2.879 2.442 4.400 53.169 -1.848 3.409 2.632 4.903 -2.722 53.389 51 BB_G38C39:A64C66_BB B 38 ? B 66 ? B 39 ? B 64 ? 1 B G 42 1_555 B U 61 1_555 B C 43 1_555 B G 60 1_555 0.088 -1.453 3.358 -3.157 12.136 45.105 -2.817 -0.367 2.885 15.470 4.025 46.727 52 BB_G42C43:G60U61_BB B 42 ? B 61 ? B 43 ? B 60 ? 1 B C 43 1_555 B G 60 1_555 B U 44 1_555 B A 59 1_555 -0.471 -1.805 3.241 -0.024 13.366 32.720 -4.740 0.774 2.348 22.587 0.040 35.275 53 BB_C43U44:A59G60_BB B 43 ? B 60 ? B 44 ? B 59 ? 1 B U 44 1_555 B A 59 1_555 B C 45 1_555 B G 58 1_555 0.999 -1.681 3.221 0.005 9.845 30.883 -4.593 -1.790 2.578 17.925 -0.009 32.377 54 BB_U44C45:G58A59_BB B 44 ? B 59 ? B 45 ? B 58 ? 1 B C 45 1_555 B G 58 1_555 B U 46 1_555 B A 57 1_555 -0.297 -1.809 3.005 -0.725 7.432 30.333 -4.569 0.435 2.508 13.940 1.359 31.218 55 BB_C45U46:A57G58_BB B 45 ? B 58 ? B 46 ? B 57 ? 1 B U 46 1_555 B A 57 1_555 B G 47 1_555 B C 56 1_555 0.112 -1.570 3.121 1.333 10.300 31.176 -4.337 0.003 2.492 18.532 -2.398 32.820 56 BB_U46G47:C56A57_BB B 46 ? B 57 ? B 47 ? B 56 ? 1 B G 47 1_555 B C 56 1_555 B C 48 1_555 B G 55 1_555 -0.658 -1.792 3.026 -4.095 3.206 31.569 -3.781 0.520 2.895 5.843 7.463 31.984 57 BB_G47C48:G55C56_BB B 47 ? B 56 ? B 48 ? B 55 ? 1 B C 48 1_555 B G 55 1_555 B G 49 1_555 B C 54 1_555 -0.115 -1.612 3.235 2.567 9.737 30.474 -4.522 0.631 2.593 17.920 -4.725 32.058 58 BB_C48G49:C54G55_BB B 48 ? B 55 ? B 49 ? B 54 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCINE GLY 4 'MANGANESE (II) ION' MN 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3OWI _pdbx_initial_refinement_model.details 'PDB ENTRY 3OWI' #