HEADER RNA 21-SEP-10 3OXE TITLE CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, MN2+ SOAKED COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOMAIN II OF GLYCINE RIBOSWITCH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DOMAIN II OF GLYCINE RIBOSWITCH; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: IN VITRO TRANSCRIPTION; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: IN VITRO TRANSCRIPTION KEYWDS GENE EXPRESSION REGULATOR, GLYCINE RIBOSWITCH, RNA EXPDTA X-RAY DIFFRACTION AUTHOR L.HUANG,A.SERGANOV,D.J.PATEL REVDAT 2 06-SEP-23 3OXE 1 REMARK SEQADV LINK REVDAT 1 29-DEC-10 3OXE 0 JRNL AUTH L.HUANG,A.SERGANOV,D.J.PATEL JRNL TITL STRUCTURAL INSIGHTS INTO LIGAND RECOGNITION BY A SENSING JRNL TITL 2 DOMAIN OF THE COOPERATIVE GLYCINE RIBOSWITCH. JRNL REF MOL.CELL V. 40 774 2010 JRNL REFN ISSN 1097-2765 JRNL PMID 21145485 JRNL DOI 10.1016/J.MOLCEL.2010.11.026 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 947 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1230 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.3710 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.4200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 3807 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 32 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.824 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.304 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.236 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.505 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4294 ; 0.005 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6712 ; 1.011 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 877 ; 0.047 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1876 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8 ; 0.094 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8 ; 0.158 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4286 ; 0.524 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 6704 ; 0.910 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1090 -46.3140 10.6560 REMARK 3 T TENSOR REMARK 3 T11: 0.0804 T22: 0.6142 REMARK 3 T33: 0.3816 T12: -0.0022 REMARK 3 T13: -0.0313 T23: -0.1389 REMARK 3 L TENSOR REMARK 3 L11: 2.7396 L22: 0.0734 REMARK 3 L33: 0.2528 L12: 0.3840 REMARK 3 L13: -0.6534 L23: -0.1248 REMARK 3 S TENSOR REMARK 3 S11: -0.1303 S12: 0.5962 S13: -0.5317 REMARK 3 S21: -0.0271 S22: 0.0274 S23: -0.0307 REMARK 3 S31: 0.0093 S32: -0.0914 S33: 0.1030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3250 -26.0320 22.7600 REMARK 3 T TENSOR REMARK 3 T11: 0.3086 T22: 0.4073 REMARK 3 T33: 0.2919 T12: 0.0137 REMARK 3 T13: 0.0075 T23: 0.0503 REMARK 3 L TENSOR REMARK 3 L11: 0.6799 L22: 0.1130 REMARK 3 L33: 0.4866 L12: 0.0416 REMARK 3 L13: -0.4299 L23: -0.0562 REMARK 3 S TENSOR REMARK 3 S11: 0.0917 S12: 0.0595 S13: 0.1531 REMARK 3 S21: -0.0073 S22: 0.0494 S23: 0.0859 REMARK 3 S31: -0.2454 S32: -0.1274 S33: -0.1411 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061691. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5000 REMARK 200 MONOCHROMATOR : SI MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.899 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.56400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 3OWI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M NA-CACODYLATE, PH 5.1, 0.2 M REMARK 280 KCL, 8 % (W/V) PEG8000 AND 80 MM MAGNESIUM ACETATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.63867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.31933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.31933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 132.63867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -250.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT GLY B 89 O HOH B 150 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 38 C3' - C2' - C1' ANGL. DEV. = -5.9 DEGREES REMARK 500 G A 38 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 C A 39 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 A A 65 C3' - O3' - P ANGL. DEV. = 7.9 DEGREES REMARK 500 A B 65 C3' - O3' - P ANGL. DEV. = 7.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE ORIGINAL MG AND MN CHAIN IDS HAVE BEEN CHANGED TO THE CLOSEST REMARK 600 POLYMER CHAIN. 100 HAS BEEN ADDED TO THE ORIGINAL RESIDUE NUMBER. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 109 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 8 O6 REMARK 620 2 G A 80 O6 78.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 112 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 17 OP2 REMARK 620 2 U A 19 OP2 95.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 135 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 21 OP2 REMARK 620 2 HOH A 150 O 87.3 REMARK 620 3 HOH A 151 O 92.0 179.3 REMARK 620 4 HOH A 152 O 89.8 90.1 89.9 REMARK 620 5 HOH A 153 O 177.6 90.4 90.3 90.7 REMARK 620 6 HOH A 154 O 89.2 89.6 90.3 179.0 90.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 103 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 22 OP1 REMARK 620 2 A A 75 OP2 176.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 102 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 32 O2' REMARK 620 2 A A 33 OP2 81.1 REMARK 620 3 C A 66 OP2 164.0 85.7 REMARK 620 4 HOH A 158 O 99.4 168.9 95.4 REMARK 620 5 HOH A 159 O 97.0 108.3 78.6 82.8 REMARK 620 6 HOH A 160 O 103.4 85.0 84.2 84.1 157.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 34 OP1 REMARK 620 2 G A 35 OP2 77.8 REMARK 620 3 HOH A 161 O 71.1 76.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 105 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 70 OP2 REMARK 620 2 A A 71 OP2 79.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 104 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 75 OP1 REMARK 620 2 A A 76 OP2 78.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 133 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 143 O REMARK 620 2 HOH A 144 O 178.9 REMARK 620 3 HOH A 145 O 89.7 89.5 REMARK 620 4 HOH A 146 O 89.4 91.2 89.8 REMARK 620 5 HOH A 147 O 89.6 89.7 89.6 178.8 REMARK 620 6 HOH A 148 O 89.7 91.2 178.9 91.1 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 134 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 149 O REMARK 620 2 HOH B 142 O 90.2 REMARK 620 3 HOH B 143 O 89.0 178.8 REMARK 620 4 HOH B 144 O 178.9 89.4 91.4 REMARK 620 5 HOH B 145 O 89.6 89.8 89.3 89.3 REMARK 620 6 HOH B 146 O 89.3 89.6 91.3 91.7 178.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 125 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U B 18 OP2 REMARK 620 2 U B 20 OP2 84.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 129 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 32 O2' REMARK 620 2 A B 33 OP2 74.7 REMARK 620 3 C B 66 OP2 152.8 84.8 REMARK 620 4 HOH B 149 O 88.8 82.9 70.9 REMARK 620 5 HOH B 150 O 92.5 94.1 106.7 176.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 122 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A B 34 OP1 REMARK 620 2 G B 35 OP2 69.5 REMARK 620 3 HOH B 151 O 77.1 77.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 127 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C B 70 OP2 REMARK 620 2 A B 71 OP2 73.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 120 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C B 74 OP1 REMARK 620 2 A B 75 OP1 79.9 REMARK 620 3 A B 76 OP2 160.4 83.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLY A 89 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLY B 89 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 115 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 121 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 122 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 124 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 127 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 136 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 141 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OWI RELATED DB: PDB REMARK 900 SAME RNA SOAKED IN MN2+ DBREF1 3OXE A 3 86 GB CP001485 DBREF2 3OXE A CP001485.1 2123554 2123637 DBREF1 3OXE B 3 86 GB CP001485 DBREF2 3OXE B CP001485.1 2123554 2123637 SEQADV 3OXE GDP A 1 GB CP001485. INSERTION SEQADV 3OXE G A 2 GB CP001485. INSERTION SEQADV 3OXE G A 50 GB CP001485. C 23601 CONFLICT SEQADV 3OXE A A 52 GB CP001485. U 23603 CONFLICT SEQADV 3OXE C A 54 GB CP001485. U 23605 CONFLICT SEQADV 3OXE U A 87 GB CP001485. INSERTION SEQADV 3OXE CCC A 88 GB CP001485. INSERTION SEQADV 3OXE G B 1 GB CP001485. INSERTION SEQADV 3OXE G B 2 GB CP001485. INSERTION SEQADV 3OXE G B 50 GB CP001485. C 23601 CONFLICT SEQADV 3OXE A B 52 GB CP001485. U 23603 CONFLICT SEQADV 3OXE C B 54 GB CP001485. U 23605 CONFLICT SEQADV 3OXE U B 87 GB CP001485. INSERTION SEQADV 3OXE CCC B 88 GB CP001485. INSERTION SEQRES 1 A 88 GDP G C U C U G G A G A G A SEQRES 2 A 88 A C C G U U U A A U C G G SEQRES 3 A 88 U C G C C G A A G G A G C SEQRES 4 A 88 A A G C U C U G C G G A A SEQRES 5 A 88 A C G C A G A G U G A A A SEQRES 6 A 88 C U C U C A G G C A A A A SEQRES 7 A 88 G G A C A G A G U CCC SEQRES 1 B 88 G G C U C U G G A G A G A SEQRES 2 B 88 A C C G U U U A A U C G G SEQRES 3 B 88 U C G C C G A A G G A G C SEQRES 4 B 88 A A G C U C U G C G G A A SEQRES 5 B 88 A C G C A G A G U G A A A SEQRES 6 B 88 C U C U C A G G C A A A A SEQRES 7 B 88 G G A C A G A G U CCC MODRES 3OXE GDP A 1 G GUANOSINE-5'-DIPHOSPHATE MODRES 3OXE CCC A 88 C MODRES 3OXE CCC B 88 C HET GDP A 1 28 HET CCC A 88 23 HET CCC B 88 23 HET GLY A 89 5 HET MN A 109 1 HET MN A 110 1 HET MN A 111 1 HET MN A 101 1 HET MN A 112 1 HET MN A 102 1 HET MN A 113 1 HET MN A 103 1 HET MN A 114 1 HET MN A 104 1 HET MN A 115 1 HET MN A 105 1 HET MN A 116 1 HET MN A 106 1 HET MN A 117 1 HET MN A 107 1 HET MN A 131 1 HET MN A 108 1 HET MN A 132 1 HET MG A 133 1 HET MG A 135 1 HET MG A 137 1 HET MG A 142 1 HET GLY B 89 5 HET MN B 118 1 HET MN B 119 1 HET MN B 120 1 HET MN B 121 1 HET MN B 122 1 HET MN B 123 1 HET MN B 124 1 HET MN B 125 1 HET MN B 126 1 HET MN B 127 1 HET MN B 128 1 HET MN B 129 1 HET MN B 130 1 HET MG B 134 1 HET MG B 136 1 HET MG B 138 1 HET MG B 139 1 HET MG B 140 1 HET MG B 141 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETNAM GLY GLYCINE HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION FORMUL 1 GDP C10 H15 N5 O11 P2 FORMUL 1 CCC 2(C9 H13 N3 O10 P2) FORMUL 3 GLY 2(C2 H5 N O2) FORMUL 4 MN 32(MN 2+) FORMUL 23 MG 10(MG 2+) FORMUL 47 HOH *32(H2 O) LINK O3' GDP A 1 P G A 2 1555 1555 1.60 LINK O3' U A 87 P CCC A 88 1555 1555 1.60 LINK O3' U B 87 P CCC B 88 1555 1555 1.61 LINK N7 GDP A 1 MN MN A 108 1555 1555 2.60 LINK O6 G A 8 MN MN A 109 1555 1555 2.31 LINK OP2 G A 10 MN MN A 111 1555 1555 2.47 LINK OP2 G A 17 MN MN A 112 1555 1555 2.48 LINK OP2 U A 19 MN MN A 112 1555 1555 2.38 LINK OP2 U A 20 MN MN A 113 1555 1555 2.44 LINK OP2 A A 21 MG MG A 135 1555 1555 2.16 LINK OP1 A A 22 MN MN A 103 1555 1555 2.64 LINK O2' G A 32 MN MN A 102 1555 1555 2.27 LINK OP2 A A 33 MN MN A 102 1555 1555 1.96 LINK OP1 A A 34 MN MN A 101 1555 1555 2.34 LINK OP2 G A 35 MN MN A 101 1555 1555 2.28 LINK N7 G A 50 MN MN A 117 1555 1555 2.40 LINK N7 G A 62 MN MN A 115 1555 1555 2.35 LINK OP2 C A 66 MN MN A 102 1555 1555 2.20 LINK OP2 C A 70 MN MN A 105 1555 1555 2.51 LINK OP2 A A 71 MN MN A 105 1555 1555 2.41 LINK N7 G A 73 MN MN A 114 1555 1555 2.71 LINK OP2 A A 75 MN MN A 103 1555 1555 2.40 LINK OP1 A A 75 MN MN A 104 1555 1555 2.08 LINK OP2 A A 76 MN MN A 104 1555 1555 2.46 LINK OP2 A A 78 MN MN A 110 1555 1555 2.23 LINK O6 G A 80 MN MN A 109 1555 1555 2.78 LINK MN MN A 101 O HOH A 161 1555 1555 2.35 LINK MN MN A 102 O HOH A 158 1555 1555 2.25 LINK MN MN A 102 O HOH A 159 1555 1555 1.82 LINK MN MN A 102 O HOH A 160 1555 1555 1.85 LINK MG MG A 133 O HOH A 143 1555 1555 2.18 LINK MG MG A 133 O HOH A 144 1555 1555 2.18 LINK MG MG A 133 O HOH A 145 1555 1555 2.18 LINK MG MG A 133 O HOH A 146 1555 1555 2.18 LINK MG MG A 133 O HOH A 147 1555 1555 2.18 LINK MG MG A 133 O HOH A 148 1555 1555 2.18 LINK MG MG A 135 O HOH A 150 1555 1555 2.17 LINK MG MG A 135 O HOH A 151 1555 1555 2.17 LINK MG MG A 135 O HOH A 152 1555 1555 2.17 LINK MG MG A 135 O HOH A 153 1555 1555 2.17 LINK MG MG A 135 O HOH A 154 1555 1555 2.17 LINK O HOH A 149 MG MG B 134 1555 1555 2.18 LINK OP2 G B 10 MN MN B 119 1555 1555 2.30 LINK OP2 U B 18 MN MN B 125 1555 1555 2.39 LINK OP2 U B 20 MN MN B 125 1555 1555 2.44 LINK OP2 A B 21 MN MN B 124 1555 1555 2.73 LINK OP1 U B 23 MN MN B 126 1555 1555 2.37 LINK O2' G B 32 MN MN B 129 1555 1555 2.33 LINK OP2 A B 33 MN MN B 129 1555 1555 2.25 LINK OP1 A B 34 MN MN B 122 1555 1555 2.40 LINK OP2 G B 35 MN MN B 122 1555 1555 2.54 LINK OP2 A B 52 MG MG B 136 1555 1555 2.14 LINK N7 G B 62 MN MN B 123 1555 1555 2.30 LINK OP2 C B 66 MN MN B 129 1555 1555 2.18 LINK OP2 C B 70 MN MN B 127 1555 1555 2.25 LINK OP2 A B 71 MN MN B 127 1555 1555 2.19 LINK OP1 C B 74 MN MN B 120 1555 1555 2.01 LINK OP1 A B 75 MN MN B 120 1555 1555 2.35 LINK OP2 A B 75 MN MN B 128 1555 1555 2.40 LINK OP2 A B 76 MN MN B 120 1555 1555 2.16 LINK MN MN B 122 O HOH B 151 1555 1555 2.41 LINK MN MN B 129 O HOH B 149 1555 1555 2.10 LINK MN MN B 129 O HOH B 150 1555 1555 2.10 LINK MG MG B 134 O HOH B 142 1555 1555 2.18 LINK MG MG B 134 O HOH B 143 1555 1555 2.18 LINK MG MG B 134 O HOH B 144 1555 1555 2.18 LINK MG MG B 134 O HOH B 145 1555 1555 2.18 LINK MG MG B 134 O HOH B 146 1555 1555 2.18 SITE 1 AC1 9 G A 32 A A 34 G A 35 G A 36 SITE 2 AC1 9 C A 68 U A 69 A A 71 MN A 102 SITE 3 AC1 9 HOH A 160 SITE 1 AC2 9 G B 32 A B 34 G B 35 G B 36 SITE 2 AC2 9 C B 68 U B 69 A B 71 MN B 129 SITE 3 AC2 9 HOH B 150 SITE 1 AC3 3 A A 34 G A 35 HOH A 161 SITE 1 AC4 7 G A 32 A A 33 C A 66 GLY A 89 SITE 2 AC4 7 HOH A 158 HOH A 159 HOH A 160 SITE 1 AC5 2 A A 22 A A 75 SITE 1 AC6 3 C A 74 A A 75 A A 76 SITE 1 AC7 3 U A 69 C A 70 A A 71 SITE 1 AC8 1 A A 33 SITE 1 AC9 1 GDP A 1 SITE 1 BC1 2 G A 8 G A 80 SITE 1 BC2 1 A A 78 SITE 1 BC3 1 G A 10 SITE 1 BC4 2 G A 17 U A 19 SITE 1 BC5 2 U A 20 A A 21 SITE 1 BC6 1 G A 73 SITE 1 BC7 1 G A 62 SITE 1 BC8 1 G A 50 SITE 1 BC9 1 G B 1 SITE 1 CC1 1 G B 10 SITE 1 CC2 3 C B 74 A B 75 A B 76 SITE 1 CC3 2 A B 78 G B 79 SITE 1 CC4 3 A B 34 G B 35 HOH B 151 SITE 1 CC5 1 G B 62 SITE 1 CC6 1 A B 21 SITE 1 CC7 2 U B 18 U B 20 SITE 1 CC8 1 U B 23 SITE 1 CC9 3 U B 69 C B 70 A B 71 SITE 1 DC1 2 A B 14 A B 75 SITE 1 DC2 6 G B 32 A B 33 C B 66 GLY B 89 SITE 2 DC2 6 HOH B 149 HOH B 150 SITE 1 DC3 1 G B 50 SITE 1 DC4 6 HOH A 143 HOH A 144 HOH A 145 HOH A 146 SITE 2 DC4 6 HOH A 147 HOH A 148 SITE 1 DC5 6 HOH A 149 HOH B 142 HOH B 143 HOH B 144 SITE 2 DC5 6 HOH B 145 HOH B 146 SITE 1 DC6 6 A A 21 HOH A 150 HOH A 151 HOH A 152 SITE 2 DC6 6 HOH A 153 HOH A 154 SITE 1 DC7 1 A B 52 SITE 1 DC8 1 A B 37 CRYST1 83.708 83.708 198.958 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011946 0.006897 0.000000 0.00000 SCALE2 0.000000 0.013794 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005026 0.00000 HETATM 1 PB GDP A 1 -9.800 -36.839 -3.639 1.00120.01 P ANISOU 1 PB GDP A 1 11106 21441 13051 -233 -622 -486 P HETATM 2 O1B GDP A 1 -10.681 -35.971 -4.510 1.00121.19 O ANISOU 2 O1B GDP A 1 11092 21920 13035 -228 -647 -259 O HETATM 3 O2B GDP A 1 -9.504 -38.159 -4.314 1.00120.90 O ANISOU 3 O2B GDP A 1 11117 21734 13088 -328 -597 -813 O HETATM 4 O3B GDP A 1 -10.515 -37.060 -2.212 1.00118.51 O ANISOU 4 O3B GDP A 1 11097 20863 13068 -182 -612 -506 O HETATM 5 O3A GDP A 1 -8.432 -36.066 -3.275 1.00118.39 O ANISOU 5 O3A GDP A 1 11007 21049 12926 -182 -627 -342 O HETATM 6 PA GDP A 1 -7.185 -36.859 -2.631 1.00116.66 P ANISOU 6 PA GDP A 1 10919 20567 12839 -192 -604 -544 P HETATM 7 O1A GDP A 1 -7.674 -37.725 -1.493 1.00115.51 O ANISOU 7 O1A GDP A 1 10906 20117 12867 -183 -584 -703 O HETATM 8 O2A GDP A 1 -6.119 -35.898 -2.154 1.00115.83 O ANISOU 8 O2A GDP A 1 10922 20274 12814 -133 -612 -357 O HETATM 9 O5' GDP A 1 -6.648 -37.787 -3.839 1.00116.76 O ANISOU 9 O5' GDP A 1 10767 20896 12700 -286 -590 -783 O HETATM 10 C5' GDP A 1 -5.350 -38.343 -3.802 1.00114.71 C ANISOU 10 C5' GDP A 1 10548 20542 12494 -308 -570 -935 C HETATM 11 C4' GDP A 1 -4.815 -38.628 -5.205 1.00115.03 C ANISOU 11 C4' GDP A 1 10396 20973 12339 -387 -564 -1050 C HETATM 12 O4' GDP A 1 -5.678 -38.155 -6.219 1.00116.02 O ANISOU 12 O4' GDP A 1 10342 21482 12257 -416 -586 -944 O HETATM 13 C3' GDP A 1 -3.508 -37.900 -5.467 1.00114.15 C ANISOU 13 C3' GDP A 1 10301 20877 12193 -364 -579 -912 C HETATM 14 O3' GDP A 1 -2.384 -38.631 -5.033 1.00112.80 O ANISOU 14 O3' GDP A 1 10219 20492 12147 -375 -551 -1092 O HETATM 15 C2' GDP A 1 -3.455 -37.623 -6.963 1.00115.70 C ANISOU 15 C2' GDP A 1 10273 21552 12137 -424 -592 -882 C HETATM 16 O2' GDP A 1 -3.015 -38.758 -7.676 1.00116.59 O ANISOU 16 O2' GDP A 1 10270 21849 12180 -518 -558 -1195 O HETATM 17 C1' GDP A 1 -4.950 -37.415 -7.192 1.00116.15 C ANISOU 17 C1' GDP A 1 10240 21783 12108 -428 -607 -798 C HETATM 18 N9 GDP A 1 -5.266 -35.968 -7.104 1.00115.12 N ANISOU 18 N9 GDP A 1 10122 21657 11962 -349 -642 -423 N HETATM 19 C8 GDP A 1 -6.181 -35.387 -6.260 1.00113.90 C ANISOU 19 C8 GDP A 1 10069 21283 11926 -280 -651 -248 C HETATM 20 N7 GDP A 1 -6.185 -34.052 -6.469 1.00113.78 N ANISOU 20 N7 GDP A 1 10017 21331 11884 -221 -671 84 N HETATM 21 C5 GDP A 1 -5.285 -33.764 -7.435 1.00114.65 C ANISOU 21 C5 GDP A 1 10004 21705 11852 -250 -680 139 C HETATM 22 C6 GDP A 1 -4.896 -32.565 -8.024 1.00115.16 C ANISOU 22 C6 GDP A 1 9976 21930 11848 -214 -696 444 C HETATM 23 O6 GDP A 1 -5.412 -31.507 -7.669 1.00114.90 O ANISOU 23 O6 GDP A 1 9965 21789 11903 -142 -700 727 O HETATM 24 N1 GDP A 1 -3.931 -32.568 -9.013 1.00116.03 N ANISOU 24 N1 GDP A 1 9959 22322 11804 -260 -703 429 N HETATM 25 C2 GDP A 1 -3.357 -33.761 -9.412 1.00116.28 C ANISOU 25 C2 GDP A 1 9958 22470 11754 -345 -690 97 C HETATM 26 N2 GDP A 1 -2.427 -33.768 -10.361 1.00117.05 N ANISOU 26 N2 GDP A 1 9928 22844 11699 -392 -694 72 N HETATM 27 N3 GDP A 1 -3.748 -34.948 -8.820 1.00115.78 N ANISOU 27 N3 GDP A 1 9984 22230 11780 -379 -667 -209 N HETATM 28 C4 GDP A 1 -4.698 -34.956 -7.846 1.00115.21 C ANISOU 28 C4 GDP A 1 10035 21883 11855 -332 -664 -183 C