data_3OYW # _entry.id 3OYW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OYW pdb_00003oyw 10.2210/pdb3oyw/pdb RCSB RCSB061745 ? ? WWPDB D_1000061745 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 3 0 2020-08-12 6 'Structure model' 3 1 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' struct_conn 14 4 'Structure model' struct_site 15 4 'Structure model' struct_site_gen 16 5 'Structure model' atom_site 17 5 'Structure model' chem_comp 18 5 'Structure model' pdbx_branch_scheme 19 5 'Structure model' pdbx_molecule_features 20 5 'Structure model' struct_conn 21 6 'Structure model' chem_comp_atom 22 6 'Structure model' chem_comp_bond 23 6 'Structure model' database_2 24 6 'Structure model' pdbx_entry_details 25 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_atom_site.label_comp_id' 11 4 'Structure model' '_atom_site.type_symbol' 12 4 'Structure model' '_chem_comp.formula' 13 4 'Structure model' '_chem_comp.formula_weight' 14 4 'Structure model' '_chem_comp.id' 15 4 'Structure model' '_chem_comp.mon_nstd_flag' 16 4 'Structure model' '_chem_comp.name' 17 4 'Structure model' '_chem_comp.type' 18 4 'Structure model' '_entity.pdbx_description' 19 4 'Structure model' '_entity.src_method' 20 4 'Structure model' '_entity.type' 21 5 'Structure model' '_atom_site.B_iso_or_equiv' 22 5 'Structure model' '_atom_site.Cartn_x' 23 5 'Structure model' '_atom_site.Cartn_y' 24 5 'Structure model' '_atom_site.Cartn_z' 25 5 'Structure model' '_atom_site.auth_asym_id' 26 5 'Structure model' '_chem_comp.pdbx_synonyms' 27 5 'Structure model' '_pdbx_branch_scheme.pdb_asym_id' 28 5 'Structure model' '_struct_conn.pdbx_dist_value' 29 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 6 'Structure model' '_database_2.pdbx_DOI' 32 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OYW _pdbx_database_status.recvd_initial_deposition_date 2010-09-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3OY8 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Blanchard, H.' 1 'Collins, P.M.' 2 # _citation.id primary _citation.title 'Galectin inhibitory disaccharides promote tumour immunity in a breast cancer model' _citation.journal_abbrev 'CANCER LETT.' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM ? _citation.country IE _citation.journal_id_ISSN 1872-7980 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20826047 _citation.pdbx_database_id_DOI 10.1016/j.canlet.2010.08.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stannard, K.A.' 1 ? primary 'Collins, P.M.' 2 ? primary 'Ito, K.' 3 ? primary 'Sullivan, E.M.' 4 ? primary 'Scott, S.A.' 5 ? primary 'Gabutero, E.' 6 ? primary 'Darren Grice, I.' 7 ? primary 'Low, P.' 8 ? primary 'Nilsson, U.J.' 9 ? primary 'Leffler, H.' 10 ? primary 'Blanchard, H.' 11 ? primary 'Ralph, S.J.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-1 14707.594 1 ? ? ? ? 2 polymer man Galectin-1 14767.713 1 ? ? ? ? 3 branched man 'beta-D-galactopyranose-(1-1)-1-thio-beta-D-galactopyranose' 358.362 2 ? ? ? ? 4 water nat water 18.015 66 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;Gal-1, Lectin galactoside-binding soluble 1, Beta-galactoside-binding lectin L-14-I, Lactose-binding lectin 1, S-Lac lectin 1, Galaptin, 14 kDa lectin, HPL, HBL, Putative MAPK-activating protein PM12, 14 kDa laminin-binding protein, HLBP14 ; 2 ;Gal-1, Lectin galactoside-binding soluble 1, Beta-galactoside-binding lectin L-14-I, Lactose-binding lectin 1, S-Lac lectin 1, Galaptin, 14 kDa lectin, HPL, HBL, Putative MAPK-activating protein PM12, 14 kDa laminin-binding protein, HLBP14 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;ACGLVASNLNLKPGE(CSO)LRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAV FPFQPGSVAEV(CSO)ITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIK(CME)VAFD ; ;ACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQ PGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD ; A ? 2 'polypeptide(L)' no yes ;ACGLVASNLNLKPGE(CSO)LRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAV FPFQPGSVAEV(CME)ITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIK(CME)VAFD ; ;ACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQ PGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD ; B ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 GLY n 1 4 LEU n 1 5 VAL n 1 6 ALA n 1 7 SER n 1 8 ASN n 1 9 LEU n 1 10 ASN n 1 11 LEU n 1 12 LYS n 1 13 PRO n 1 14 GLY n 1 15 GLU n 1 16 CSO n 1 17 LEU n 1 18 ARG n 1 19 VAL n 1 20 ARG n 1 21 GLY n 1 22 GLU n 1 23 VAL n 1 24 ALA n 1 25 PRO n 1 26 ASP n 1 27 ALA n 1 28 LYS n 1 29 SER n 1 30 PHE n 1 31 VAL n 1 32 LEU n 1 33 ASN n 1 34 LEU n 1 35 GLY n 1 36 LYS n 1 37 ASP n 1 38 SER n 1 39 ASN n 1 40 ASN n 1 41 LEU n 1 42 CYS n 1 43 LEU n 1 44 HIS n 1 45 PHE n 1 46 ASN n 1 47 PRO n 1 48 ARG n 1 49 PHE n 1 50 ASN n 1 51 ALA n 1 52 HIS n 1 53 GLY n 1 54 ASP n 1 55 ALA n 1 56 ASN n 1 57 THR n 1 58 ILE n 1 59 VAL n 1 60 CYS n 1 61 ASN n 1 62 SER n 1 63 LYS n 1 64 ASP n 1 65 GLY n 1 66 GLY n 1 67 ALA n 1 68 TRP n 1 69 GLY n 1 70 THR n 1 71 GLU n 1 72 GLN n 1 73 ARG n 1 74 GLU n 1 75 ALA n 1 76 VAL n 1 77 PHE n 1 78 PRO n 1 79 PHE n 1 80 GLN n 1 81 PRO n 1 82 GLY n 1 83 SER n 1 84 VAL n 1 85 ALA n 1 86 GLU n 1 87 VAL n 1 88 CSO n 1 89 ILE n 1 90 THR n 1 91 PHE n 1 92 ASP n 1 93 GLN n 1 94 ALA n 1 95 ASN n 1 96 LEU n 1 97 THR n 1 98 VAL n 1 99 LYS n 1 100 LEU n 1 101 PRO n 1 102 ASP n 1 103 GLY n 1 104 TYR n 1 105 GLU n 1 106 PHE n 1 107 LYS n 1 108 PHE n 1 109 PRO n 1 110 ASN n 1 111 ARG n 1 112 LEU n 1 113 ASN n 1 114 LEU n 1 115 GLU n 1 116 ALA n 1 117 ILE n 1 118 ASN n 1 119 TYR n 1 120 MET n 1 121 ALA n 1 122 ALA n 1 123 ASP n 1 124 GLY n 1 125 ASP n 1 126 PHE n 1 127 LYS n 1 128 ILE n 1 129 LYS n 1 130 CME n 1 131 VAL n 1 132 ALA n 1 133 PHE n 1 134 ASP n 2 1 ALA n 2 2 CYS n 2 3 GLY n 2 4 LEU n 2 5 VAL n 2 6 ALA n 2 7 SER n 2 8 ASN n 2 9 LEU n 2 10 ASN n 2 11 LEU n 2 12 LYS n 2 13 PRO n 2 14 GLY n 2 15 GLU n 2 16 CSO n 2 17 LEU n 2 18 ARG n 2 19 VAL n 2 20 ARG n 2 21 GLY n 2 22 GLU n 2 23 VAL n 2 24 ALA n 2 25 PRO n 2 26 ASP n 2 27 ALA n 2 28 LYS n 2 29 SER n 2 30 PHE n 2 31 VAL n 2 32 LEU n 2 33 ASN n 2 34 LEU n 2 35 GLY n 2 36 LYS n 2 37 ASP n 2 38 SER n 2 39 ASN n 2 40 ASN n 2 41 LEU n 2 42 CYS n 2 43 LEU n 2 44 HIS n 2 45 PHE n 2 46 ASN n 2 47 PRO n 2 48 ARG n 2 49 PHE n 2 50 ASN n 2 51 ALA n 2 52 HIS n 2 53 GLY n 2 54 ASP n 2 55 ALA n 2 56 ASN n 2 57 THR n 2 58 ILE n 2 59 VAL n 2 60 CYS n 2 61 ASN n 2 62 SER n 2 63 LYS n 2 64 ASP n 2 65 GLY n 2 66 GLY n 2 67 ALA n 2 68 TRP n 2 69 GLY n 2 70 THR n 2 71 GLU n 2 72 GLN n 2 73 ARG n 2 74 GLU n 2 75 ALA n 2 76 VAL n 2 77 PHE n 2 78 PRO n 2 79 PHE n 2 80 GLN n 2 81 PRO n 2 82 GLY n 2 83 SER n 2 84 VAL n 2 85 ALA n 2 86 GLU n 2 87 VAL n 2 88 CME n 2 89 ILE n 2 90 THR n 2 91 PHE n 2 92 ASP n 2 93 GLN n 2 94 ALA n 2 95 ASN n 2 96 LEU n 2 97 THR n 2 98 VAL n 2 99 LYS n 2 100 LEU n 2 101 PRO n 2 102 ASP n 2 103 GLY n 2 104 TYR n 2 105 GLU n 2 106 PHE n 2 107 LYS n 2 108 PHE n 2 109 PRO n 2 110 ASN n 2 111 ARG n 2 112 LEU n 2 113 ASN n 2 114 LEU n 2 115 GLU n 2 116 ALA n 2 117 ILE n 2 118 ASN n 2 119 TYR n 2 120 MET n 2 121 ALA n 2 122 ALA n 2 123 ASP n 2 124 GLY n 2 125 ASP n 2 126 PHE n 2 127 LYS n 2 128 ILE n 2 129 LYS n 2 130 CME n 2 131 VAL n 2 132 ALA n 2 133 PHE n 2 134 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? LGALS1 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? LGALS1 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'WURCS=2.0/1,2,1/[a2112h-1b_1-5]/1-1/a1-b1*S*' WURCS PDB2Glycan 1.1.0 2 3 '[][b-D-Galp1SH]{[(1+S)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 YIO _pdbx_entity_branch_link.atom_id_2 S1 _pdbx_entity_branch_link.leaving_atom_id_2 HS1 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CME 'L-peptide linking' n 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' ? 'C5 H11 N O3 S2' 197.276 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YIO 'D-saccharide, beta linking' . 1-thio-beta-D-galactopyranose '(2R,3R,4S,5R,6S)-2-(HYDROXYMETHYL)-6-SULFANYL-OXANE-3,4,5-TRIOL; 1-thio-beta-D-galactose; 1-thio-D-galactose; 1-thio-galactose' 'C6 H12 O5 S' 196.221 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal YIO 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp1SH # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 CSO 16 16 16 CSO CSO A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 TRP 68 68 68 TRP TRP A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 CSO 88 88 88 CSO CSO A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 TYR 119 119 119 TYR TYR A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 ASP 125 125 125 ASP ASP A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 CME 130 130 130 CME CME A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 ASP 134 134 134 ASP ASP A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 CYS 2 2 2 CYS CYS B . n B 2 3 GLY 3 3 3 GLY GLY B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 ALA 6 6 6 ALA ALA B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 ASN 8 8 8 ASN ASN B . n B 2 9 LEU 9 9 9 LEU LEU B . n B 2 10 ASN 10 10 10 ASN ASN B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 LYS 12 12 12 LYS LYS B . n B 2 13 PRO 13 13 13 PRO PRO B . n B 2 14 GLY 14 14 14 GLY GLY B . n B 2 15 GLU 15 15 15 GLU GLU B . n B 2 16 CSO 16 16 16 CSO CSO B . n B 2 17 LEU 17 17 17 LEU LEU B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 VAL 19 19 19 VAL VAL B . n B 2 20 ARG 20 20 20 ARG ARG B . n B 2 21 GLY 21 21 21 GLY GLY B . n B 2 22 GLU 22 22 22 GLU GLU B . n B 2 23 VAL 23 23 23 VAL VAL B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 PRO 25 25 25 PRO PRO B . n B 2 26 ASP 26 26 26 ASP ASP B . n B 2 27 ALA 27 27 27 ALA ALA B . n B 2 28 LYS 28 28 28 LYS LYS B . n B 2 29 SER 29 29 29 SER SER B . n B 2 30 PHE 30 30 30 PHE PHE B . n B 2 31 VAL 31 31 31 VAL VAL B . n B 2 32 LEU 32 32 32 LEU LEU B . n B 2 33 ASN 33 33 33 ASN ASN B . n B 2 34 LEU 34 34 34 LEU LEU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 LYS 36 36 36 LYS LYS B . n B 2 37 ASP 37 37 37 ASP ASP B . n B 2 38 SER 38 38 38 SER SER B . n B 2 39 ASN 39 39 39 ASN ASN B . n B 2 40 ASN 40 40 40 ASN ASN B . n B 2 41 LEU 41 41 41 LEU LEU B . n B 2 42 CYS 42 42 42 CYS CYS B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 HIS 44 44 44 HIS HIS B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ASN 46 46 46 ASN ASN B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 ARG 48 48 48 ARG ARG B . n B 2 49 PHE 49 49 49 PHE PHE B . n B 2 50 ASN 50 50 50 ASN ASN B . n B 2 51 ALA 51 51 51 ALA ALA B . n B 2 52 HIS 52 52 52 HIS HIS B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ASP 54 54 54 ASP ASP B . n B 2 55 ALA 55 55 55 ALA ALA B . n B 2 56 ASN 56 56 56 ASN ASN B . n B 2 57 THR 57 57 57 THR THR B . n B 2 58 ILE 58 58 58 ILE ILE B . n B 2 59 VAL 59 59 59 VAL VAL B . n B 2 60 CYS 60 60 60 CYS CYS B . n B 2 61 ASN 61 61 61 ASN ASN B . n B 2 62 SER 62 62 62 SER SER B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 ASP 64 64 64 ASP ASP B . n B 2 65 GLY 65 65 65 GLY GLY B . n B 2 66 GLY 66 66 66 GLY GLY B . n B 2 67 ALA 67 67 67 ALA ALA B . n B 2 68 TRP 68 68 68 TRP TRP B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 GLU 71 71 71 GLU GLU B . n B 2 72 GLN 72 72 72 GLN GLN B . n B 2 73 ARG 73 73 73 ARG ARG B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 ALA 75 75 75 ALA ALA B . n B 2 76 VAL 76 76 76 VAL VAL B . n B 2 77 PHE 77 77 77 PHE PHE B . n B 2 78 PRO 78 78 78 PRO PRO B . n B 2 79 PHE 79 79 79 PHE PHE B . n B 2 80 GLN 80 80 80 GLN GLN B . n B 2 81 PRO 81 81 81 PRO PRO B . n B 2 82 GLY 82 82 82 GLY GLY B . n B 2 83 SER 83 83 83 SER SER B . n B 2 84 VAL 84 84 84 VAL VAL B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 GLU 86 86 86 GLU GLU B . n B 2 87 VAL 87 87 87 VAL VAL B . n B 2 88 CME 88 88 88 CME CME B . n B 2 89 ILE 89 89 89 ILE ILE B . n B 2 90 THR 90 90 90 THR THR B . n B 2 91 PHE 91 91 91 PHE PHE B . n B 2 92 ASP 92 92 92 ASP ASP B . n B 2 93 GLN 93 93 93 GLN GLN B . n B 2 94 ALA 94 94 94 ALA ALA B . n B 2 95 ASN 95 95 95 ASN ASN B . n B 2 96 LEU 96 96 96 LEU LEU B . n B 2 97 THR 97 97 97 THR THR B . n B 2 98 VAL 98 98 98 VAL VAL B . n B 2 99 LYS 99 99 99 LYS LYS B . n B 2 100 LEU 100 100 100 LEU LEU B . n B 2 101 PRO 101 101 101 PRO PRO B . n B 2 102 ASP 102 102 102 ASP ASP B . n B 2 103 GLY 103 103 103 GLY GLY B . n B 2 104 TYR 104 104 104 TYR TYR B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 PHE 106 106 106 PHE PHE B . n B 2 107 LYS 107 107 107 LYS LYS B . n B 2 108 PHE 108 108 108 PHE PHE B . n B 2 109 PRO 109 109 109 PRO PRO B . n B 2 110 ASN 110 110 110 ASN ASN B . n B 2 111 ARG 111 111 111 ARG ARG B . n B 2 112 LEU 112 112 112 LEU LEU B . n B 2 113 ASN 113 113 113 ASN ASN B . n B 2 114 LEU 114 114 114 LEU LEU B . n B 2 115 GLU 115 115 115 GLU GLU B . n B 2 116 ALA 116 116 116 ALA ALA B . n B 2 117 ILE 117 117 117 ILE ILE B . n B 2 118 ASN 118 118 118 ASN ASN B . n B 2 119 TYR 119 119 119 TYR TYR B . n B 2 120 MET 120 120 120 MET MET B . n B 2 121 ALA 121 121 121 ALA ALA B . n B 2 122 ALA 122 122 122 ALA ALA B . n B 2 123 ASP 123 123 123 ASP ASP B . n B 2 124 GLY 124 124 124 GLY GLY B . n B 2 125 ASP 125 125 125 ASP ASP B . n B 2 126 PHE 126 126 126 PHE PHE B . n B 2 127 LYS 127 127 127 LYS LYS B . n B 2 128 ILE 128 128 128 ILE ILE B . n B 2 129 LYS 129 129 129 LYS LYS B . n B 2 130 CME 130 130 130 CME CME B . n B 2 131 VAL 131 131 131 VAL VAL B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 PHE 133 133 133 PHE PHE B . n B 2 134 ASP 134 134 134 ASP ASP B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 YIO 1 E YIO 1 A TDG 600 n C 3 GAL 2 E GAL 2 A TDG 600 n D 3 YIO 1 F YIO 1 B TDG 601 n D 3 GAL 2 F GAL 2 B TDG 601 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 135 135 HOH HOH A . E 4 HOH 2 136 136 HOH HOH A . E 4 HOH 3 137 137 HOH HOH A . E 4 HOH 4 138 138 HOH HOH A . E 4 HOH 5 139 139 HOH HOH A . E 4 HOH 6 140 140 HOH HOH A . E 4 HOH 7 141 141 HOH HOH A . E 4 HOH 8 142 142 HOH HOH A . E 4 HOH 9 143 143 HOH HOH A . E 4 HOH 10 144 144 HOH HOH A . E 4 HOH 11 145 145 HOH HOH A . E 4 HOH 12 146 146 HOH HOH A . E 4 HOH 13 147 147 HOH HOH A . E 4 HOH 14 148 148 HOH HOH A . E 4 HOH 15 149 149 HOH HOH A . E 4 HOH 16 150 150 HOH HOH A . E 4 HOH 17 151 151 HOH HOH A . E 4 HOH 18 152 152 HOH HOH A . E 4 HOH 19 153 153 HOH HOH A . E 4 HOH 20 154 154 HOH HOH A . E 4 HOH 21 155 155 HOH HOH A . E 4 HOH 22 156 156 HOH HOH A . E 4 HOH 23 159 159 HOH HOH A . E 4 HOH 24 160 160 HOH HOH A . E 4 HOH 25 162 162 HOH HOH A . E 4 HOH 26 163 163 HOH HOH A . E 4 HOH 27 164 164 HOH HOH A . E 4 HOH 28 165 165 HOH HOH A . F 4 HOH 1 135 135 HOH HOH B . F 4 HOH 2 136 136 HOH HOH B . F 4 HOH 3 137 137 HOH HOH B . F 4 HOH 4 138 138 HOH HOH B . F 4 HOH 5 139 139 HOH HOH B . F 4 HOH 6 140 140 HOH HOH B . F 4 HOH 7 141 141 HOH HOH B . F 4 HOH 8 142 142 HOH HOH B . F 4 HOH 9 143 143 HOH HOH B . F 4 HOH 10 144 144 HOH HOH B . F 4 HOH 11 145 145 HOH HOH B . F 4 HOH 12 146 146 HOH HOH B . F 4 HOH 13 147 147 HOH HOH B . F 4 HOH 14 148 148 HOH HOH B . F 4 HOH 15 149 149 HOH HOH B . F 4 HOH 16 150 150 HOH HOH B . F 4 HOH 17 151 151 HOH HOH B . F 4 HOH 18 152 152 HOH HOH B . F 4 HOH 19 153 153 HOH HOH B . F 4 HOH 20 154 154 HOH HOH B . F 4 HOH 21 155 155 HOH HOH B . F 4 HOH 22 156 156 HOH HOH B . F 4 HOH 23 157 157 HOH HOH B . F 4 HOH 24 158 158 HOH HOH B . F 4 HOH 25 160 160 HOH HOH B . F 4 HOH 26 161 161 HOH HOH B . F 4 HOH 27 162 162 HOH HOH B . F 4 HOH 28 163 163 HOH HOH B . F 4 HOH 29 164 164 HOH HOH B . F 4 HOH 30 165 165 HOH HOH B . F 4 HOH 31 166 166 HOH HOH B . F 4 HOH 32 167 167 HOH HOH B . F 4 HOH 33 168 168 HOH HOH B . F 4 HOH 34 169 169 HOH HOH B . F 4 HOH 35 170 170 HOH HOH B . F 4 HOH 36 171 171 HOH HOH B . F 4 HOH 37 172 161 HOH HOH B . F 4 HOH 38 173 173 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 REFMAC refinement 5.2.0019 ? 2 SAINT 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 # _cell.entry_id 3OYW _cell.length_a 44.368 _cell.length_b 58.367 _cell.length_c 111.793 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OYW _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3OYW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 49.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;4-8 microlitre drops consisting of equal volumes of protein solution (20 mM sodium potassium phosphate buffer, pH 7.0, and protein at concentration of 10 mg/mL) and reservoir solution (0.2 M ammonium sulphate, 25% w/v polyethylene glycol 4000, 0.1M sodium acetate trihydrate, pH 6.2), VAPOR DIFFUSION, HANGING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.pdbx_collection_date 2008-05-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'osmic mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type MACSCIENCE _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3OYW _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 55.9 _reflns.d_resolution_high 2.5 _reflns.number_obs 10154 _reflns.number_all 10154 _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.6 _reflns_shell.percent_possible_all 80.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3OYW _refine.ls_number_reflns_obs 9645 _refine.ls_number_reflns_all 10154 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 55.90 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 95.20 _refine.ls_R_factor_obs 0.17068 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16701 _refine.ls_R_factor_R_free 0.24492 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 480 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 27.616 _refine.aniso_B[1][1] 1.96 _refine.aniso_B[2][2] -2.60 _refine.aniso_B[3][3] 0.64 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.698 _refine.pdbx_overall_ESU_R_Free 0.302 _refine.overall_SU_ML 0.194 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.532 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2064 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 2176 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 55.90 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 2185 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.152 1.981 ? 2964 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 13.181 5.216 ? 278 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.865 25.140 ? 107 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.266 15.000 ? 329 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.692 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.072 0.200 ? 329 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 1679 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.223 0.200 ? 781 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.319 0.200 ? 1436 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 104 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.202 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.183 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.685 2.000 ? 1346 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.147 3.000 ? 2152 'X-RAY DIFFRACTION' ? r_scbond_it 4.671 4.000 ? 839 'X-RAY DIFFRACTION' ? r_scangle_it 7.358 6.000 ? 811 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.495 _refine_ls_shell.d_res_low 2.560 _refine_ls_shell.number_reflns_R_work 598 _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.percent_reflns_obs 80.52 _refine_ls_shell.R_factor_R_free 0.379 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 3OYW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3OYW _struct.title 'Crystal structure of human galectin-1 in complex with thiodigalactoside' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OYW _struct_keywords.pdbx_keywords 'CARBOHYDRATE BINDING PROTEIN' _struct_keywords.text 'Carbohydrate binding protein, Galectin, Lactobionic acid' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP LEG1_HUMAN P09382 1 ;ACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQ PGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD ; 2 ? 2 UNP LEG1_HUMAN P09382 2 ;ACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQ PGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD ; 2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OYW A 1 ? 134 ? P09382 2 ? 135 ? 1 134 2 2 3OYW B 1 ? 134 ? P09382 2 ? 135 ? 1 134 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 101 ? GLY A 103 ? PRO A 101 GLY A 103 5 ? 3 HELX_P HELX_P2 2 PRO B 101 ? GLY B 103 ? PRO B 101 GLY B 103 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 15 C ? ? ? 1_555 A CSO 16 N ? ? A GLU 15 A CSO 16 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A CSO 16 C ? ? ? 1_555 A LEU 17 N ? ? A CSO 16 A LEU 17 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A VAL 87 C ? ? ? 1_555 A CSO 88 N ? ? A VAL 87 A CSO 88 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A CSO 88 C ? ? ? 1_555 A ILE 89 N ? ? A CSO 88 A ILE 89 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A LYS 129 C ? ? ? 1_555 A CME 130 N ? ? A LYS 129 A CME 130 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A CME 130 C ? ? ? 1_555 A VAL 131 N ? ? A CME 130 A VAL 131 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? B GLU 15 C ? ? ? 1_555 B CSO 16 N ? ? B GLU 15 B CSO 16 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale8 covale both ? B CSO 16 C ? ? ? 1_555 B LEU 17 N ? ? B CSO 16 B LEU 17 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale9 covale both ? B VAL 87 C ? ? ? 1_555 B CME 88 N ? ? B VAL 87 B CME 88 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? B CME 88 C ? ? ? 1_555 B ILE 89 N ? ? B CME 88 B ILE 89 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale11 covale both ? B LYS 129 C ? ? ? 1_555 B CME 130 N ? ? B LYS 129 B CME 130 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale12 covale both ? B CME 130 C ? ? ? 1_555 B VAL 131 N ? ? B CME 130 B VAL 131 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale13 covale one ? C YIO . S1 ? ? ? 1_555 C GAL . C1 ? ? E YIO 1 E GAL 2 1_555 ? ? ? ? ? ? ? 1.771 sing ? covale14 covale one ? D YIO . S1 ? ? ? 1_555 D GAL . C1 ? ? F YIO 1 F GAL 2 1_555 ? ? ? ? ? ? ? 1.766 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CSO A 16 ? . . . . CSO A 16 ? 1_555 . . . . . . . CYS 1 CSO Hydroxylation 'Named protein modification' 2 CSO A 88 ? . . . . CSO A 88 ? 1_555 . . . . . . . CYS 1 CSO Hydroxylation 'Named protein modification' 3 CME A 130 ? . . . . CME A 130 ? 1_555 . . . . . . . CYS 1 CME Beta-mercaptoethanol 'Named protein modification' 4 CSO B 16 ? . . . . CSO B 16 ? 1_555 . . . . . . . CYS 1 CSO Hydroxylation 'Named protein modification' 5 CME B 88 ? . . . . CME B 88 ? 1_555 . . . . . . . CYS 1 CME Beta-mercaptoethanol 'Named protein modification' 6 CME B 130 ? . . . . CME B 130 ? 1_555 . . . . . . . CYS 1 CME Beta-mercaptoethanol 'Named protein modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 12 ? C ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel B 10 11 ? anti-parallel B 11 12 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel C 8 9 ? anti-parallel C 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 67 ? TRP A 68 ? ALA A 67 TRP A 68 A 2 ASP A 54 ? ASP A 64 ? ASP A 54 ASP A 64 A 3 ASN A 40 ? ALA A 51 ? ASN A 40 ALA A 51 A 4 PHE A 30 ? ASP A 37 ? PHE A 30 ASP A 37 A 5 ILE A 117 ? GLY A 124 ? ILE A 117 GLY A 124 A 6 VAL A 5 ? LEU A 11 ? VAL A 5 LEU A 11 A 7 VAL B 5 ? LEU B 11 ? VAL B 5 LEU B 11 A 8 ILE B 117 ? GLY B 124 ? ILE B 117 GLY B 124 A 9 PHE B 30 ? ASP B 37 ? PHE B 30 ASP B 37 A 10 ASN B 40 ? ALA B 51 ? ASN B 40 ALA B 51 A 11 ASP B 54 ? ASP B 64 ? ASP B 54 ASP B 64 A 12 ALA B 67 ? TRP B 68 ? ALA B 67 TRP B 68 B 1 GLN A 72 ? ARG A 73 ? GLN A 72 ARG A 73 B 2 ASP A 54 ? ASP A 64 ? ASP A 54 ASP A 64 B 3 ASN A 40 ? ALA A 51 ? ASN A 40 ALA A 51 B 4 PHE A 30 ? ASP A 37 ? PHE A 30 ASP A 37 B 5 ILE A 117 ? GLY A 124 ? ILE A 117 GLY A 124 B 6 VAL A 5 ? LEU A 11 ? VAL A 5 LEU A 11 B 7 VAL B 5 ? LEU B 11 ? VAL B 5 LEU B 11 B 8 ILE B 117 ? GLY B 124 ? ILE B 117 GLY B 124 B 9 PHE B 30 ? ASP B 37 ? PHE B 30 ASP B 37 B 10 ASN B 40 ? ALA B 51 ? ASN B 40 ALA B 51 B 11 ASP B 54 ? ASP B 64 ? ASP B 54 ASP B 64 B 12 GLN B 72 ? ARG B 73 ? GLN B 72 ARG B 73 C 1 GLU A 105 ? PRO A 109 ? GLU A 105 PRO A 109 C 2 ASN A 95 ? LYS A 99 ? ASN A 95 LYS A 99 C 3 VAL A 84 ? PHE A 91 ? VAL A 84 PHE A 91 C 4 CSO A 16 ? VAL A 23 ? CSO A 16 VAL A 23 C 5 PHE A 126 ? PHE A 133 ? PHE A 126 PHE A 133 C 6 PHE B 126 ? PHE B 133 ? PHE B 126 PHE B 133 C 7 LEU B 17 ? VAL B 23 ? LEU B 17 VAL B 23 C 8 VAL B 84 ? PHE B 91 ? VAL B 84 PHE B 91 C 9 ASN B 95 ? LYS B 99 ? ASN B 95 LYS B 99 C 10 GLU B 105 ? PRO B 109 ? GLU B 105 PRO B 109 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 67 ? O ALA A 67 N ASP A 64 ? N ASP A 64 A 2 3 O THR A 57 ? O THR A 57 N ARG A 48 ? N ARG A 48 A 3 4 O PHE A 45 ? O PHE A 45 N LEU A 32 ? N LEU A 32 A 4 5 N VAL A 31 ? N VAL A 31 O ASP A 123 ? O ASP A 123 A 5 6 O MET A 120 ? O MET A 120 N ALA A 6 ? N ALA A 6 A 6 7 N SER A 7 ? N SER A 7 O VAL B 5 ? O VAL B 5 A 7 8 N ALA B 6 ? N ALA B 6 O MET B 120 ? O MET B 120 A 8 9 O ALA B 121 ? O ALA B 121 N ASN B 33 ? N ASN B 33 A 9 10 N LEU B 32 ? N LEU B 32 O PHE B 45 ? O PHE B 45 A 10 11 N ARG B 48 ? N ARG B 48 O THR B 57 ? O THR B 57 A 11 12 N ASP B 64 ? N ASP B 64 O ALA B 67 ? O ALA B 67 B 1 2 O GLN A 72 ? O GLN A 72 N CYS A 60 ? N CYS A 60 B 2 3 O THR A 57 ? O THR A 57 N ARG A 48 ? N ARG A 48 B 3 4 O PHE A 45 ? O PHE A 45 N LEU A 32 ? N LEU A 32 B 4 5 N VAL A 31 ? N VAL A 31 O ASP A 123 ? O ASP A 123 B 5 6 O MET A 120 ? O MET A 120 N ALA A 6 ? N ALA A 6 B 6 7 N SER A 7 ? N SER A 7 O VAL B 5 ? O VAL B 5 B 7 8 N ALA B 6 ? N ALA B 6 O MET B 120 ? O MET B 120 B 8 9 O ALA B 121 ? O ALA B 121 N ASN B 33 ? N ASN B 33 B 9 10 N LEU B 32 ? N LEU B 32 O PHE B 45 ? O PHE B 45 B 10 11 N ARG B 48 ? N ARG B 48 O THR B 57 ? O THR B 57 B 11 12 N CYS B 60 ? N CYS B 60 O GLN B 72 ? O GLN B 72 C 1 2 O PHE A 108 ? O PHE A 108 N LEU A 96 ? N LEU A 96 C 2 3 O THR A 97 ? O THR A 97 N THR A 90 ? N THR A 90 C 3 4 O ILE A 89 ? O ILE A 89 N LEU A 17 ? N LEU A 17 C 4 5 N ARG A 20 ? N ARG A 20 O LYS A 129 ? O LYS A 129 C 5 6 N LYS A 129 ? N LYS A 129 O PHE B 133 ? O PHE B 133 C 6 7 O ALA B 132 ? O ALA B 132 N ARG B 18 ? N ARG B 18 C 7 8 N LEU B 17 ? N LEU B 17 O ILE B 89 ? O ILE B 89 C 8 9 N CME B 88 ? N CME B 88 O LYS B 99 ? O LYS B 99 C 9 10 N LEU B 96 ? N LEU B 96 O PHE B 108 ? O PHE B 108 # _pdbx_entry_details.entry_id 3OYW _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 78 ? ? -88.10 38.75 2 1 ASN A 113 ? ? -104.19 73.30 3 1 ASP A 125 ? ? -91.44 51.41 4 1 CYS B 2 ? ? -150.49 -43.53 5 1 ASP B 26 ? ? -108.16 43.04 6 1 ASN B 50 ? ? -164.26 89.89 # _pdbx_molecule_features.prd_id PRD_900027 _pdbx_molecule_features.name thiodigalactoside _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with S-glycosidic bond between monosaccharides, and with reducing-end-to-reducing-end glycosidic bond' # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900027 C 2 PRD_900027 D # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CSO 16 A CSO 16 ? CYS S-HYDROXYCYSTEINE 2 A CSO 88 A CSO 88 ? CYS S-HYDROXYCYSTEINE 3 A CME 130 A CME 130 ? CYS 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' 4 B CSO 16 B CSO 16 ? CYS S-HYDROXYCYSTEINE 5 B CME 88 B CME 88 ? CYS 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' 6 B CME 130 B CME 130 ? CYS 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CME N N N N 74 CME CA C N R 75 CME CB C N N 76 CME SG S N N 77 CME SD S N N 78 CME CE C N N 79 CME CZ C N N 80 CME OH O N N 81 CME C C N N 82 CME O O N N 83 CME OXT O N N 84 CME H H N N 85 CME H2 H N N 86 CME HA H N N 87 CME HB2 H N N 88 CME HB3 H N N 89 CME HE2 H N N 90 CME HE3 H N N 91 CME HZ2 H N N 92 CME HZ3 H N N 93 CME HH H N N 94 CME HXT H N N 95 CSO N N N N 96 CSO CA C N R 97 CSO CB C N N 98 CSO SG S N N 99 CSO C C N N 100 CSO O O N N 101 CSO OXT O N N 102 CSO OD O N N 103 CSO H H N N 104 CSO H2 H N N 105 CSO HA H N N 106 CSO HB2 H N N 107 CSO HB3 H N N 108 CSO HXT H N N 109 CSO HD H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GAL C1 C N R 125 GAL C2 C N R 126 GAL C3 C N S 127 GAL C4 C N R 128 GAL C5 C N R 129 GAL C6 C N N 130 GAL O1 O N N 131 GAL O2 O N N 132 GAL O3 O N N 133 GAL O4 O N N 134 GAL O5 O N N 135 GAL O6 O N N 136 GAL H1 H N N 137 GAL H2 H N N 138 GAL H3 H N N 139 GAL H4 H N N 140 GAL H5 H N N 141 GAL H61 H N N 142 GAL H62 H N N 143 GAL HO1 H N N 144 GAL HO2 H N N 145 GAL HO3 H N N 146 GAL HO4 H N N 147 GAL HO6 H N N 148 GLN N N N N 149 GLN CA C N S 150 GLN C C N N 151 GLN O O N N 152 GLN CB C N N 153 GLN CG C N N 154 GLN CD C N N 155 GLN OE1 O N N 156 GLN NE2 N N N 157 GLN OXT O N N 158 GLN H H N N 159 GLN H2 H N N 160 GLN HA H N N 161 GLN HB2 H N N 162 GLN HB3 H N N 163 GLN HG2 H N N 164 GLN HG3 H N N 165 GLN HE21 H N N 166 GLN HE22 H N N 167 GLN HXT H N N 168 GLU N N N N 169 GLU CA C N S 170 GLU C C N N 171 GLU O O N N 172 GLU CB C N N 173 GLU CG C N N 174 GLU CD C N N 175 GLU OE1 O N N 176 GLU OE2 O N N 177 GLU OXT O N N 178 GLU H H N N 179 GLU H2 H N N 180 GLU HA H N N 181 GLU HB2 H N N 182 GLU HB3 H N N 183 GLU HG2 H N N 184 GLU HG3 H N N 185 GLU HE2 H N N 186 GLU HXT H N N 187 GLY N N N N 188 GLY CA C N N 189 GLY C C N N 190 GLY O O N N 191 GLY OXT O N N 192 GLY H H N N 193 GLY H2 H N N 194 GLY HA2 H N N 195 GLY HA3 H N N 196 GLY HXT H N N 197 HIS N N N N 198 HIS CA C N S 199 HIS C C N N 200 HIS O O N N 201 HIS CB C N N 202 HIS CG C Y N 203 HIS ND1 N Y N 204 HIS CD2 C Y N 205 HIS CE1 C Y N 206 HIS NE2 N Y N 207 HIS OXT O N N 208 HIS H H N N 209 HIS H2 H N N 210 HIS HA H N N 211 HIS HB2 H N N 212 HIS HB3 H N N 213 HIS HD1 H N N 214 HIS HD2 H N N 215 HIS HE1 H N N 216 HIS HE2 H N N 217 HIS HXT H N N 218 HOH O O N N 219 HOH H1 H N N 220 HOH H2 H N N 221 ILE N N N N 222 ILE CA C N S 223 ILE C C N N 224 ILE O O N N 225 ILE CB C N S 226 ILE CG1 C N N 227 ILE CG2 C N N 228 ILE CD1 C N N 229 ILE OXT O N N 230 ILE H H N N 231 ILE H2 H N N 232 ILE HA H N N 233 ILE HB H N N 234 ILE HG12 H N N 235 ILE HG13 H N N 236 ILE HG21 H N N 237 ILE HG22 H N N 238 ILE HG23 H N N 239 ILE HD11 H N N 240 ILE HD12 H N N 241 ILE HD13 H N N 242 ILE HXT H N N 243 LEU N N N N 244 LEU CA C N S 245 LEU C C N N 246 LEU O O N N 247 LEU CB C N N 248 LEU CG C N N 249 LEU CD1 C N N 250 LEU CD2 C N N 251 LEU OXT O N N 252 LEU H H N N 253 LEU H2 H N N 254 LEU HA H N N 255 LEU HB2 H N N 256 LEU HB3 H N N 257 LEU HG H N N 258 LEU HD11 H N N 259 LEU HD12 H N N 260 LEU HD13 H N N 261 LEU HD21 H N N 262 LEU HD22 H N N 263 LEU HD23 H N N 264 LEU HXT H N N 265 LYS N N N N 266 LYS CA C N S 267 LYS C C N N 268 LYS O O N N 269 LYS CB C N N 270 LYS CG C N N 271 LYS CD C N N 272 LYS CE C N N 273 LYS NZ N N N 274 LYS OXT O N N 275 LYS H H N N 276 LYS H2 H N N 277 LYS HA H N N 278 LYS HB2 H N N 279 LYS HB3 H N N 280 LYS HG2 H N N 281 LYS HG3 H N N 282 LYS HD2 H N N 283 LYS HD3 H N N 284 LYS HE2 H N N 285 LYS HE3 H N N 286 LYS HZ1 H N N 287 LYS HZ2 H N N 288 LYS HZ3 H N N 289 LYS HXT H N N 290 MET N N N N 291 MET CA C N S 292 MET C C N N 293 MET O O N N 294 MET CB C N N 295 MET CG C N N 296 MET SD S N N 297 MET CE C N N 298 MET OXT O N N 299 MET H H N N 300 MET H2 H N N 301 MET HA H N N 302 MET HB2 H N N 303 MET HB3 H N N 304 MET HG2 H N N 305 MET HG3 H N N 306 MET HE1 H N N 307 MET HE2 H N N 308 MET HE3 H N N 309 MET HXT H N N 310 PHE N N N N 311 PHE CA C N S 312 PHE C C N N 313 PHE O O N N 314 PHE CB C N N 315 PHE CG C Y N 316 PHE CD1 C Y N 317 PHE CD2 C Y N 318 PHE CE1 C Y N 319 PHE CE2 C Y N 320 PHE CZ C Y N 321 PHE OXT O N N 322 PHE H H N N 323 PHE H2 H N N 324 PHE HA H N N 325 PHE HB2 H N N 326 PHE HB3 H N N 327 PHE HD1 H N N 328 PHE HD2 H N N 329 PHE HE1 H N N 330 PHE HE2 H N N 331 PHE HZ H N N 332 PHE HXT H N N 333 PRO N N N N 334 PRO CA C N S 335 PRO C C N N 336 PRO O O N N 337 PRO CB C N N 338 PRO CG C N N 339 PRO CD C N N 340 PRO OXT O N N 341 PRO H H N N 342 PRO HA H N N 343 PRO HB2 H N N 344 PRO HB3 H N N 345 PRO HG2 H N N 346 PRO HG3 H N N 347 PRO HD2 H N N 348 PRO HD3 H N N 349 PRO HXT H N N 350 SER N N N N 351 SER CA C N S 352 SER C C N N 353 SER O O N N 354 SER CB C N N 355 SER OG O N N 356 SER OXT O N N 357 SER H H N N 358 SER H2 H N N 359 SER HA H N N 360 SER HB2 H N N 361 SER HB3 H N N 362 SER HG H N N 363 SER HXT H N N 364 THR N N N N 365 THR CA C N S 366 THR C C N N 367 THR O O N N 368 THR CB C N R 369 THR OG1 O N N 370 THR CG2 C N N 371 THR OXT O N N 372 THR H H N N 373 THR H2 H N N 374 THR HA H N N 375 THR HB H N N 376 THR HG1 H N N 377 THR HG21 H N N 378 THR HG22 H N N 379 THR HG23 H N N 380 THR HXT H N N 381 TRP N N N N 382 TRP CA C N S 383 TRP C C N N 384 TRP O O N N 385 TRP CB C N N 386 TRP CG C Y N 387 TRP CD1 C Y N 388 TRP CD2 C Y N 389 TRP NE1 N Y N 390 TRP CE2 C Y N 391 TRP CE3 C Y N 392 TRP CZ2 C Y N 393 TRP CZ3 C Y N 394 TRP CH2 C Y N 395 TRP OXT O N N 396 TRP H H N N 397 TRP H2 H N N 398 TRP HA H N N 399 TRP HB2 H N N 400 TRP HB3 H N N 401 TRP HD1 H N N 402 TRP HE1 H N N 403 TRP HE3 H N N 404 TRP HZ2 H N N 405 TRP HZ3 H N N 406 TRP HH2 H N N 407 TRP HXT H N N 408 TYR N N N N 409 TYR CA C N S 410 TYR C C N N 411 TYR O O N N 412 TYR CB C N N 413 TYR CG C Y N 414 TYR CD1 C Y N 415 TYR CD2 C Y N 416 TYR CE1 C Y N 417 TYR CE2 C Y N 418 TYR CZ C Y N 419 TYR OH O N N 420 TYR OXT O N N 421 TYR H H N N 422 TYR H2 H N N 423 TYR HA H N N 424 TYR HB2 H N N 425 TYR HB3 H N N 426 TYR HD1 H N N 427 TYR HD2 H N N 428 TYR HE1 H N N 429 TYR HE2 H N N 430 TYR HH H N N 431 TYR HXT H N N 432 VAL N N N N 433 VAL CA C N S 434 VAL C C N N 435 VAL O O N N 436 VAL CB C N N 437 VAL CG1 C N N 438 VAL CG2 C N N 439 VAL OXT O N N 440 VAL H H N N 441 VAL H2 H N N 442 VAL HA H N N 443 VAL HB H N N 444 VAL HG11 H N N 445 VAL HG12 H N N 446 VAL HG13 H N N 447 VAL HG21 H N N 448 VAL HG22 H N N 449 VAL HG23 H N N 450 VAL HXT H N N 451 YIO C1 C N S 452 YIO C2 C N R 453 YIO C3 C N S 454 YIO C4 C N R 455 YIO C5 C N R 456 YIO C6 C N N 457 YIO O2 O N N 458 YIO O3 O N N 459 YIO O4 O N N 460 YIO O5 O N N 461 YIO O6 O N N 462 YIO S1 S N N 463 YIO H1 H N N 464 YIO H2 H N N 465 YIO H3 H N N 466 YIO HO2 H N N 467 YIO H4 H N N 468 YIO HO3 H N N 469 YIO H5 H N N 470 YIO HO4 H N N 471 YIO H61 H N N 472 YIO H62 H N N 473 YIO HO6 H N N 474 YIO HS1 H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CME N CA sing N N 70 CME N H sing N N 71 CME N H2 sing N N 72 CME CA CB sing N N 73 CME CA C sing N N 74 CME CA HA sing N N 75 CME CB SG sing N N 76 CME CB HB2 sing N N 77 CME CB HB3 sing N N 78 CME SG SD sing N N 79 CME SD CE sing N N 80 CME CE CZ sing N N 81 CME CE HE2 sing N N 82 CME CE HE3 sing N N 83 CME CZ OH sing N N 84 CME CZ HZ2 sing N N 85 CME CZ HZ3 sing N N 86 CME OH HH sing N N 87 CME C O doub N N 88 CME C OXT sing N N 89 CME OXT HXT sing N N 90 CSO N CA sing N N 91 CSO N H sing N N 92 CSO N H2 sing N N 93 CSO CA CB sing N N 94 CSO CA C sing N N 95 CSO CA HA sing N N 96 CSO CB SG sing N N 97 CSO CB HB2 sing N N 98 CSO CB HB3 sing N N 99 CSO SG OD sing N N 100 CSO C O doub N N 101 CSO C OXT sing N N 102 CSO OXT HXT sing N N 103 CSO OD HD sing N N 104 CYS N CA sing N N 105 CYS N H sing N N 106 CYS N H2 sing N N 107 CYS CA C sing N N 108 CYS CA CB sing N N 109 CYS CA HA sing N N 110 CYS C O doub N N 111 CYS C OXT sing N N 112 CYS CB SG sing N N 113 CYS CB HB2 sing N N 114 CYS CB HB3 sing N N 115 CYS SG HG sing N N 116 CYS OXT HXT sing N N 117 GAL C1 C2 sing N N 118 GAL C1 O1 sing N N 119 GAL C1 O5 sing N N 120 GAL C1 H1 sing N N 121 GAL C2 C3 sing N N 122 GAL C2 O2 sing N N 123 GAL C2 H2 sing N N 124 GAL C3 C4 sing N N 125 GAL C3 O3 sing N N 126 GAL C3 H3 sing N N 127 GAL C4 C5 sing N N 128 GAL C4 O4 sing N N 129 GAL C4 H4 sing N N 130 GAL C5 C6 sing N N 131 GAL C5 O5 sing N N 132 GAL C5 H5 sing N N 133 GAL C6 O6 sing N N 134 GAL C6 H61 sing N N 135 GAL C6 H62 sing N N 136 GAL O1 HO1 sing N N 137 GAL O2 HO2 sing N N 138 GAL O3 HO3 sing N N 139 GAL O4 HO4 sing N N 140 GAL O6 HO6 sing N N 141 GLN N CA sing N N 142 GLN N H sing N N 143 GLN N H2 sing N N 144 GLN CA C sing N N 145 GLN CA CB sing N N 146 GLN CA HA sing N N 147 GLN C O doub N N 148 GLN C OXT sing N N 149 GLN CB CG sing N N 150 GLN CB HB2 sing N N 151 GLN CB HB3 sing N N 152 GLN CG CD sing N N 153 GLN CG HG2 sing N N 154 GLN CG HG3 sing N N 155 GLN CD OE1 doub N N 156 GLN CD NE2 sing N N 157 GLN NE2 HE21 sing N N 158 GLN NE2 HE22 sing N N 159 GLN OXT HXT sing N N 160 GLU N CA sing N N 161 GLU N H sing N N 162 GLU N H2 sing N N 163 GLU CA C sing N N 164 GLU CA CB sing N N 165 GLU CA HA sing N N 166 GLU C O doub N N 167 GLU C OXT sing N N 168 GLU CB CG sing N N 169 GLU CB HB2 sing N N 170 GLU CB HB3 sing N N 171 GLU CG CD sing N N 172 GLU CG HG2 sing N N 173 GLU CG HG3 sing N N 174 GLU CD OE1 doub N N 175 GLU CD OE2 sing N N 176 GLU OE2 HE2 sing N N 177 GLU OXT HXT sing N N 178 GLY N CA sing N N 179 GLY N H sing N N 180 GLY N H2 sing N N 181 GLY CA C sing N N 182 GLY CA HA2 sing N N 183 GLY CA HA3 sing N N 184 GLY C O doub N N 185 GLY C OXT sing N N 186 GLY OXT HXT sing N N 187 HIS N CA sing N N 188 HIS N H sing N N 189 HIS N H2 sing N N 190 HIS CA C sing N N 191 HIS CA CB sing N N 192 HIS CA HA sing N N 193 HIS C O doub N N 194 HIS C OXT sing N N 195 HIS CB CG sing N N 196 HIS CB HB2 sing N N 197 HIS CB HB3 sing N N 198 HIS CG ND1 sing Y N 199 HIS CG CD2 doub Y N 200 HIS ND1 CE1 doub Y N 201 HIS ND1 HD1 sing N N 202 HIS CD2 NE2 sing Y N 203 HIS CD2 HD2 sing N N 204 HIS CE1 NE2 sing Y N 205 HIS CE1 HE1 sing N N 206 HIS NE2 HE2 sing N N 207 HIS OXT HXT sing N N 208 HOH O H1 sing N N 209 HOH O H2 sing N N 210 ILE N CA sing N N 211 ILE N H sing N N 212 ILE N H2 sing N N 213 ILE CA C sing N N 214 ILE CA CB sing N N 215 ILE CA HA sing N N 216 ILE C O doub N N 217 ILE C OXT sing N N 218 ILE CB CG1 sing N N 219 ILE CB CG2 sing N N 220 ILE CB HB sing N N 221 ILE CG1 CD1 sing N N 222 ILE CG1 HG12 sing N N 223 ILE CG1 HG13 sing N N 224 ILE CG2 HG21 sing N N 225 ILE CG2 HG22 sing N N 226 ILE CG2 HG23 sing N N 227 ILE CD1 HD11 sing N N 228 ILE CD1 HD12 sing N N 229 ILE CD1 HD13 sing N N 230 ILE OXT HXT sing N N 231 LEU N CA sing N N 232 LEU N H sing N N 233 LEU N H2 sing N N 234 LEU CA C sing N N 235 LEU CA CB sing N N 236 LEU CA HA sing N N 237 LEU C O doub N N 238 LEU C OXT sing N N 239 LEU CB CG sing N N 240 LEU CB HB2 sing N N 241 LEU CB HB3 sing N N 242 LEU CG CD1 sing N N 243 LEU CG CD2 sing N N 244 LEU CG HG sing N N 245 LEU CD1 HD11 sing N N 246 LEU CD1 HD12 sing N N 247 LEU CD1 HD13 sing N N 248 LEU CD2 HD21 sing N N 249 LEU CD2 HD22 sing N N 250 LEU CD2 HD23 sing N N 251 LEU OXT HXT sing N N 252 LYS N CA sing N N 253 LYS N H sing N N 254 LYS N H2 sing N N 255 LYS CA C sing N N 256 LYS CA CB sing N N 257 LYS CA HA sing N N 258 LYS C O doub N N 259 LYS C OXT sing N N 260 LYS CB CG sing N N 261 LYS CB HB2 sing N N 262 LYS CB HB3 sing N N 263 LYS CG CD sing N N 264 LYS CG HG2 sing N N 265 LYS CG HG3 sing N N 266 LYS CD CE sing N N 267 LYS CD HD2 sing N N 268 LYS CD HD3 sing N N 269 LYS CE NZ sing N N 270 LYS CE HE2 sing N N 271 LYS CE HE3 sing N N 272 LYS NZ HZ1 sing N N 273 LYS NZ HZ2 sing N N 274 LYS NZ HZ3 sing N N 275 LYS OXT HXT sing N N 276 MET N CA sing N N 277 MET N H sing N N 278 MET N H2 sing N N 279 MET CA C sing N N 280 MET CA CB sing N N 281 MET CA HA sing N N 282 MET C O doub N N 283 MET C OXT sing N N 284 MET CB CG sing N N 285 MET CB HB2 sing N N 286 MET CB HB3 sing N N 287 MET CG SD sing N N 288 MET CG HG2 sing N N 289 MET CG HG3 sing N N 290 MET SD CE sing N N 291 MET CE HE1 sing N N 292 MET CE HE2 sing N N 293 MET CE HE3 sing N N 294 MET OXT HXT sing N N 295 PHE N CA sing N N 296 PHE N H sing N N 297 PHE N H2 sing N N 298 PHE CA C sing N N 299 PHE CA CB sing N N 300 PHE CA HA sing N N 301 PHE C O doub N N 302 PHE C OXT sing N N 303 PHE CB CG sing N N 304 PHE CB HB2 sing N N 305 PHE CB HB3 sing N N 306 PHE CG CD1 doub Y N 307 PHE CG CD2 sing Y N 308 PHE CD1 CE1 sing Y N 309 PHE CD1 HD1 sing N N 310 PHE CD2 CE2 doub Y N 311 PHE CD2 HD2 sing N N 312 PHE CE1 CZ doub Y N 313 PHE CE1 HE1 sing N N 314 PHE CE2 CZ sing Y N 315 PHE CE2 HE2 sing N N 316 PHE CZ HZ sing N N 317 PHE OXT HXT sing N N 318 PRO N CA sing N N 319 PRO N CD sing N N 320 PRO N H sing N N 321 PRO CA C sing N N 322 PRO CA CB sing N N 323 PRO CA HA sing N N 324 PRO C O doub N N 325 PRO C OXT sing N N 326 PRO CB CG sing N N 327 PRO CB HB2 sing N N 328 PRO CB HB3 sing N N 329 PRO CG CD sing N N 330 PRO CG HG2 sing N N 331 PRO CG HG3 sing N N 332 PRO CD HD2 sing N N 333 PRO CD HD3 sing N N 334 PRO OXT HXT sing N N 335 SER N CA sing N N 336 SER N H sing N N 337 SER N H2 sing N N 338 SER CA C sing N N 339 SER CA CB sing N N 340 SER CA HA sing N N 341 SER C O doub N N 342 SER C OXT sing N N 343 SER CB OG sing N N 344 SER CB HB2 sing N N 345 SER CB HB3 sing N N 346 SER OG HG sing N N 347 SER OXT HXT sing N N 348 THR N CA sing N N 349 THR N H sing N N 350 THR N H2 sing N N 351 THR CA C sing N N 352 THR CA CB sing N N 353 THR CA HA sing N N 354 THR C O doub N N 355 THR C OXT sing N N 356 THR CB OG1 sing N N 357 THR CB CG2 sing N N 358 THR CB HB sing N N 359 THR OG1 HG1 sing N N 360 THR CG2 HG21 sing N N 361 THR CG2 HG22 sing N N 362 THR CG2 HG23 sing N N 363 THR OXT HXT sing N N 364 TRP N CA sing N N 365 TRP N H sing N N 366 TRP N H2 sing N N 367 TRP CA C sing N N 368 TRP CA CB sing N N 369 TRP CA HA sing N N 370 TRP C O doub N N 371 TRP C OXT sing N N 372 TRP CB CG sing N N 373 TRP CB HB2 sing N N 374 TRP CB HB3 sing N N 375 TRP CG CD1 doub Y N 376 TRP CG CD2 sing Y N 377 TRP CD1 NE1 sing Y N 378 TRP CD1 HD1 sing N N 379 TRP CD2 CE2 doub Y N 380 TRP CD2 CE3 sing Y N 381 TRP NE1 CE2 sing Y N 382 TRP NE1 HE1 sing N N 383 TRP CE2 CZ2 sing Y N 384 TRP CE3 CZ3 doub Y N 385 TRP CE3 HE3 sing N N 386 TRP CZ2 CH2 doub Y N 387 TRP CZ2 HZ2 sing N N 388 TRP CZ3 CH2 sing Y N 389 TRP CZ3 HZ3 sing N N 390 TRP CH2 HH2 sing N N 391 TRP OXT HXT sing N N 392 TYR N CA sing N N 393 TYR N H sing N N 394 TYR N H2 sing N N 395 TYR CA C sing N N 396 TYR CA CB sing N N 397 TYR CA HA sing N N 398 TYR C O doub N N 399 TYR C OXT sing N N 400 TYR CB CG sing N N 401 TYR CB HB2 sing N N 402 TYR CB HB3 sing N N 403 TYR CG CD1 doub Y N 404 TYR CG CD2 sing Y N 405 TYR CD1 CE1 sing Y N 406 TYR CD1 HD1 sing N N 407 TYR CD2 CE2 doub Y N 408 TYR CD2 HD2 sing N N 409 TYR CE1 CZ doub Y N 410 TYR CE1 HE1 sing N N 411 TYR CE2 CZ sing Y N 412 TYR CE2 HE2 sing N N 413 TYR CZ OH sing N N 414 TYR OH HH sing N N 415 TYR OXT HXT sing N N 416 VAL N CA sing N N 417 VAL N H sing N N 418 VAL N H2 sing N N 419 VAL CA C sing N N 420 VAL CA CB sing N N 421 VAL CA HA sing N N 422 VAL C O doub N N 423 VAL C OXT sing N N 424 VAL CB CG1 sing N N 425 VAL CB CG2 sing N N 426 VAL CB HB sing N N 427 VAL CG1 HG11 sing N N 428 VAL CG1 HG12 sing N N 429 VAL CG1 HG13 sing N N 430 VAL CG2 HG21 sing N N 431 VAL CG2 HG22 sing N N 432 VAL CG2 HG23 sing N N 433 VAL OXT HXT sing N N 434 YIO C1 C2 sing N N 435 YIO C1 O5 sing N N 436 YIO C1 S1 sing N N 437 YIO C2 C3 sing N N 438 YIO C2 O2 sing N N 439 YIO C3 C4 sing N N 440 YIO C3 O3 sing N N 441 YIO C4 C5 sing N N 442 YIO C4 O4 sing N N 443 YIO C5 C6 sing N N 444 YIO C5 O5 sing N N 445 YIO C6 O6 sing N N 446 YIO C1 H1 sing N N 447 YIO C2 H2 sing N N 448 YIO C3 H3 sing N N 449 YIO O2 HO2 sing N N 450 YIO C4 H4 sing N N 451 YIO O3 HO3 sing N N 452 YIO C5 H5 sing N N 453 YIO O4 HO4 sing N N 454 YIO C6 H61 sing N N 455 YIO C6 H62 sing N N 456 YIO S1 HS1 sing N N 457 YIO O6 HO6 sing N N 458 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 YIO 1 n 3 GAL 2 n # _atom_sites.entry_id 3OYW _atom_sites.fract_transf_matrix[1][1] 0.022539 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017133 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008945 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_