HEADER TRANSLATION 24-SEP-10 3OYY TITLE STRUCTURE OF PSEUDOMONAS AERUGINOSA ELONGATION FACTOR P COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR P; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: EF-P; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: EFP, PA2851; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ELONGATION FACTOR, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR J.CHOE,S.CHOI REVDAT 3 20-MAR-24 3OYY 1 REMARK REVDAT 2 25-DEC-19 3OYY 1 JRNL SEQADV REVDAT 1 09-MAR-11 3OYY 0 JRNL AUTH S.CHOI,J.CHOE JRNL TITL CRYSTAL STRUCTURE OF ELONGATION FACTOR P FROM PSEUDOMONAS JRNL TITL 2 AERUGINOSA AT 1.75 ANGSTROM RESOLUTION. JRNL REF PROTEINS V. 79 1688 2011 JRNL REFN ESSN 1097-0134 JRNL PMID 21365687 JRNL DOI 10.1002/PROT.22992 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 44114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2346 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3023 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2924 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.97000 REMARK 3 B22 (A**2) : 0.40000 REMARK 3 B33 (A**2) : 1.24000 REMARK 3 B12 (A**2) : 0.44000 REMARK 3 B13 (A**2) : 1.33000 REMARK 3 B23 (A**2) : 0.33000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.985 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2977 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4022 ; 1.764 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 6.226 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;36.307 ;25.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 538 ;14.828 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;16.129 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 460 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2222 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1400 ; 0.256 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2094 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 450 ; 0.243 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 89 ; 0.220 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 42 ; 0.394 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1852 ; 1.230 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2995 ; 2.181 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1125 ; 3.272 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1026 ; 5.447 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 186 REMARK 3 RESIDUE RANGE : B 1 B 186 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2911 39.6540 31.4568 REMARK 3 T TENSOR REMARK 3 T11: 0.0052 T22: 0.0336 REMARK 3 T33: 0.0460 T12: 0.0006 REMARK 3 T13: 0.0115 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.0063 L22: 0.2027 REMARK 3 L33: 0.1355 L12: 0.0190 REMARK 3 L13: 0.0274 L23: 0.0755 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0014 S13: 0.0012 REMARK 3 S21: -0.0106 S22: -0.0067 S23: 0.0193 REMARK 3 S31: -0.0124 S32: 0.0158 S33: 0.0128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OYY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-10; 31-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY; PAL/PLS REMARK 200 BEAMLINE : BL-17A; 4A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97865; 0.97904 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46460 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.35M KPHOSPHATE, 0.15M NAPHOSPHATE, REMARK 280 0.2M NAACETATE PH 4.5, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 147 REMARK 465 LYS A 148 REMARK 465 LYS A 187 REMARK 465 ALA A 188 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 LYS B 187 REMARK 465 ALA B 188 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB THR B 152 O HOH B 543 1.60 REMARK 500 CG MET B 150 O HOH B 529 1.61 REMARK 500 SD MET B 150 O HOH B 529 1.87 REMARK 500 CB THR B 129 O HOH B 454 1.91 REMARK 500 O HOH B 247 O HOH B 345 1.93 REMARK 500 O HOH B 194 O HOH B 473 1.94 REMARK 500 O HOH B 377 O HOH B 582 1.99 REMARK 500 N MET B 1 O HOH B 594 1.99 REMARK 500 O ALA B 76 O LEU B 79 2.00 REMARK 500 O HOH B 277 O HOH B 589 2.01 REMARK 500 O HOH B 285 O HOH B 374 2.02 REMARK 500 O HOH A 299 O HOH A 510 2.03 REMARK 500 O HOH B 275 O HOH B 296 2.04 REMARK 500 CE MET B 150 O HOH B 529 2.08 REMARK 500 O HOH B 288 O HOH B 374 2.09 REMARK 500 O HOH A 339 O HOH B 220 2.09 REMARK 500 N MET B 1 O HOH B 560 2.09 REMARK 500 O HOH B 508 O HOH B 592 2.11 REMARK 500 O HOH B 519 O HOH B 551 2.13 REMARK 500 O HOH B 245 O HOH B 505 2.17 REMARK 500 O HOH A 364 O HOH B 582 2.17 REMARK 500 O HOH B 340 O HOH B 579 2.17 REMARK 500 O HOH B 435 O HOH B 564 2.19 REMARK 500 O HOH B 206 O HOH B 327 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 297 O HOH B 266 1665 1.70 REMARK 500 O HOH A 189 O HOH B 542 1666 1.75 REMARK 500 NH2 ARG B 185 O HOH A 297 1445 2.00 REMARK 500 O HOH A 585 O HOH A 586 1545 2.17 REMARK 500 O HOH A 584 O HOH B 198 1655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 65 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 73 -65.06 -105.10 REMARK 500 THR A 145 24.21 -162.65 REMARK 500 LYS A 183 -39.55 -131.94 REMARK 500 ASN B 16 15.98 59.28 REMARK 500 SER B 30 -86.70 -78.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 189 DBREF 3OYY A 1 188 UNP Q9HZZ2 EFP_PSEAE 1 188 DBREF 3OYY B 1 188 UNP Q9HZZ2 EFP_PSEAE 1 188 SEQADV 3OYY MET A -2 UNP Q9HZZ2 EXPRESSION TAG SEQADV 3OYY ALA A -1 UNP Q9HZZ2 EXPRESSION TAG SEQADV 3OYY SER A 0 UNP Q9HZZ2 EXPRESSION TAG SEQADV 3OYY MET B -2 UNP Q9HZZ2 EXPRESSION TAG SEQADV 3OYY ALA B -1 UNP Q9HZZ2 EXPRESSION TAG SEQADV 3OYY SER B 0 UNP Q9HZZ2 EXPRESSION TAG SEQRES 1 A 191 MET ALA SER MET LYS THR ALA GLN GLU PHE ARG ALA GLY SEQRES 2 A 191 GLN VAL ALA ASN ILE ASN GLY ALA PRO TRP VAL ILE GLN SEQRES 3 A 191 LYS ALA GLU PHE ASN LYS SER GLY ARG ASN ALA ALA VAL SEQRES 4 A 191 VAL LYS MET LYS LEU LYS ASN LEU LEU THR GLY ALA GLY SEQRES 5 A 191 THR GLU THR VAL PHE LYS ALA ASP ASP LYS LEU GLU PRO SEQRES 6 A 191 ILE ILE LEU ASP ARG LYS GLU VAL THR TYR SER TYR PHE SEQRES 7 A 191 ALA ASP PRO LEU TYR VAL PHE MET ASP SER GLU PHE ASN SEQRES 8 A 191 GLN TYR GLU ILE GLU LYS ASP ASP LEU GLU GLY VAL LEU SEQRES 9 A 191 THR PHE ILE GLU ASP GLY MET THR ASP ILE CYS GLU ALA SEQRES 10 A 191 VAL PHE TYR ASN ASP LYS VAL ILE SER VAL GLU LEU PRO SEQRES 11 A 191 THR THR ILE VAL ARG GLN ILE ALA TYR THR GLU PRO ALA SEQRES 12 A 191 VAL ARG GLY ASP THR SER GLY LYS VAL MET LYS THR ALA SEQRES 13 A 191 ARG LEU ASN ASN GLY ALA GLU LEU GLN VAL SER ALA PHE SEQRES 14 A 191 CYS GLU ILE GLY ASP SER ILE GLU ILE ASP THR ARG THR SEQRES 15 A 191 GLY GLU TYR LYS SER ARG VAL LYS ALA SEQRES 1 B 191 MET ALA SER MET LYS THR ALA GLN GLU PHE ARG ALA GLY SEQRES 2 B 191 GLN VAL ALA ASN ILE ASN GLY ALA PRO TRP VAL ILE GLN SEQRES 3 B 191 LYS ALA GLU PHE ASN LYS SER GLY ARG ASN ALA ALA VAL SEQRES 4 B 191 VAL LYS MET LYS LEU LYS ASN LEU LEU THR GLY ALA GLY SEQRES 5 B 191 THR GLU THR VAL PHE LYS ALA ASP ASP LYS LEU GLU PRO SEQRES 6 B 191 ILE ILE LEU ASP ARG LYS GLU VAL THR TYR SER TYR PHE SEQRES 7 B 191 ALA ASP PRO LEU TYR VAL PHE MET ASP SER GLU PHE ASN SEQRES 8 B 191 GLN TYR GLU ILE GLU LYS ASP ASP LEU GLU GLY VAL LEU SEQRES 9 B 191 THR PHE ILE GLU ASP GLY MET THR ASP ILE CYS GLU ALA SEQRES 10 B 191 VAL PHE TYR ASN ASP LYS VAL ILE SER VAL GLU LEU PRO SEQRES 11 B 191 THR THR ILE VAL ARG GLN ILE ALA TYR THR GLU PRO ALA SEQRES 12 B 191 VAL ARG GLY ASP THR SER GLY LYS VAL MET LYS THR ALA SEQRES 13 B 191 ARG LEU ASN ASN GLY ALA GLU LEU GLN VAL SER ALA PHE SEQRES 14 B 191 CYS GLU ILE GLY ASP SER ILE GLU ILE ASP THR ARG THR SEQRES 15 B 191 GLY GLU TYR LYS SER ARG VAL LYS ALA HET PO4 B 189 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *492(H2 O) HELIX 1 1 GLN A 5 PHE A 7 5 3 HELIX 2 2 GLU A 93 LEU A 97 5 5 HELIX 3 3 VAL A 100 ILE A 104 5 5 HELIX 4 4 GLN B 5 PHE B 7 5 3 HELIX 5 5 GLU B 93 LEU B 97 5 5 SHEET 1 A 6 LYS A 2 THR A 3 0 SHEET 2 A 6 LYS A 59 PRO A 62 -1 O LEU A 60 N LYS A 2 SHEET 3 A 6 VAL A 12 ILE A 15 -1 N ASN A 14 O GLU A 61 SHEET 4 A 6 ALA A 18 ASN A 28 -1 O TRP A 20 N ALA A 13 SHEET 5 A 6 VAL A 36 ASN A 43 -1 O LYS A 42 N VAL A 21 SHEET 6 A 6 GLY A 49 LYS A 55 -1 O PHE A 54 N VAL A 37 SHEET 1 B 5 GLN A 89 ILE A 92 0 SHEET 2 B 5 TYR A 80 ASP A 84 -1 N TYR A 80 O ILE A 92 SHEET 3 B 5 ASP A 66 PHE A 75 -1 N SER A 73 O VAL A 81 SHEET 4 B 5 CYS A 112 TYR A 117 -1 O PHE A 116 N ASP A 66 SHEET 5 B 5 LYS A 120 GLU A 125 -1 O ILE A 122 N VAL A 115 SHEET 1 C 5 GLU A 160 SER A 164 0 SHEET 2 C 5 MET A 150 LEU A 155 -1 N LYS A 151 O VAL A 163 SHEET 3 C 5 THR A 129 THR A 137 -1 N TYR A 136 O ARG A 154 SHEET 4 C 5 SER A 172 ASP A 176 -1 O ILE A 175 N ILE A 130 SHEET 5 C 5 GLU A 181 ARG A 185 -1 O SER A 184 N GLU A 174 SHEET 1 D 6 LYS B 2 THR B 3 0 SHEET 2 D 6 LYS B 59 PRO B 62 -1 O LEU B 60 N LYS B 2 SHEET 3 D 6 VAL B 12 ILE B 15 -1 N ASN B 14 O GLU B 61 SHEET 4 D 6 ALA B 18 ASN B 28 -1 O TRP B 20 N ALA B 13 SHEET 5 D 6 VAL B 36 ASN B 43 -1 O LYS B 40 N GLN B 23 SHEET 6 D 6 GLY B 49 LYS B 55 -1 O THR B 52 N MET B 39 SHEET 1 E 5 GLN B 89 ILE B 92 0 SHEET 2 E 5 TYR B 80 MET B 83 -1 N TYR B 80 O ILE B 92 SHEET 3 E 5 ASP B 66 PHE B 75 -1 N SER B 73 O VAL B 81 SHEET 4 E 5 CYS B 112 TYR B 117 -1 O PHE B 116 N ASP B 66 SHEET 5 E 5 LYS B 120 GLU B 125 -1 O ILE B 122 N VAL B 115 SHEET 1 F 5 GLU B 160 SER B 164 0 SHEET 2 F 5 MET B 150 LEU B 155 -1 N LYS B 151 O VAL B 163 SHEET 3 F 5 THR B 129 TYR B 136 -1 N TYR B 136 O ARG B 154 SHEET 4 F 5 SER B 172 ASP B 176 -1 O ILE B 173 N ARG B 132 SHEET 5 F 5 GLU B 181 ARG B 185 -1 O SER B 184 N GLU B 174 CISPEP 1 ASP A 77 PRO A 78 0 4.70 CISPEP 2 ASP B 77 PRO B 78 0 3.88 SITE 1 AC1 5 GLY B 10 VAL B 21 ILE B 22 ARG B 67 SITE 2 AC1 5 HOH B 300 CRYST1 38.852 51.986 67.581 90.19 99.52 104.57 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025739 0.006690 0.004636 0.00000 SCALE2 0.000000 0.019875 0.000936 0.00000 SCALE3 0.000000 0.000000 0.015020 0.00000