HEADER IMMUNE SYSTEM 29-SEP-10 3P0Y TITLE ANTI-EGFR/HER3 FAB DL11 IN COMPLEX WITH DOMAIN III OF EGFR TITLE 2 EXTRACELLULAR REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN III, UNP RESIDUES 334-540; COMPND 5 SYNONYM: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-1, PROTO-ONCOGENE C- COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: FAB DL11 HEAVY CHAIN; COMPND 11 CHAIN: H; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: FAB DL11 LIGHT CHAIN; COMPND 15 CHAIN: L; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PW0579-3; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PW0579-3 KEYWDS BETA-SANDWICH, ANTIGENS EGFR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.EIGENBROT,S.SHIA REVDAT 3 29-JUL-20 3P0Y 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 21-MAR-12 3P0Y 1 JRNL REVDAT 1 26-OCT-11 3P0Y 0 JRNL AUTH G.SCHAEFER,L.HABER,L.M.CROCKER,S.SHIA,L.SHAO,D.DOWBENKO, JRNL AUTH 2 K.TOTPAL,A.WONG,C.V.LEE,S.STAWICKI,R.CLARK,C.FIELDS, JRNL AUTH 3 G.D.LEWIS PHILLIPS,R.A.PRELL,D.M.DANILENKO,Y.FRANKE, JRNL AUTH 4 J.P.STEPHAN,J.HWANG,Y.WU,J.BOSTROM,M.X.SLIWKOWSKI,G.FUH, JRNL AUTH 5 C.EIGENBROT JRNL TITL A TWO-IN-ONE ANTIBODY AGAINST HER3 AND EGFR HAS SUPERIOR JRNL TITL 2 INHIBITORY ACTIVITY COMPARED WITH MONOSPECIFIC ANTIBODIES. JRNL REF CANCER CELL V. 20 472 2011 JRNL REFN ISSN 1535-6108 JRNL PMID 22014573 JRNL DOI 10.1016/J.CCR.2011.09.003 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 73362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1507 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9534 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 189 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4747 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : -0.76000 REMARK 3 B33 (A**2) : 0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.433 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5067 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6906 ; 1.240 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 642 ; 6.227 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;32.510 ;24.428 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 818 ;11.926 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;17.155 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 791 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3775 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2184 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3448 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 543 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.152 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3260 ; 2.400 ; 2.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5128 ; 3.507 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2057 ; 3.636 ; 3.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1778 ; 5.426 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3P0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .9774 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : SI REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74875 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM PHOSPHATE/PEG3350/SODIUM REMARK 280 DEXTRAN SULFATE, PH 8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.96700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 100.33850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.96700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 100.33850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 49.42600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 659 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 504 REMARK 465 VAL A 505 REMARK 465 SER A 506 REMARK 465 ARG A 507 REMARK 465 GLY A 508 REMARK 465 ARG A 509 REMARK 465 GLU A 510 REMARK 465 CYS A 511 REMARK 465 VAL A 512 REMARK 465 ASP A 513 REMARK 465 LYS A 514 REMARK 465 GLY A 515 REMARK 465 ASN A 516 REMARK 465 SER A 517 REMARK 465 HIS A 518 REMARK 465 HIS A 519 REMARK 465 HIS A 520 REMARK 465 HIS A 521 REMARK 465 HIS A 522 REMARK 465 HIS A 523 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 389 C2 NAG C 1 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 447 -23.49 76.22 REMARK 500 ASN A 469 -156.52 -97.86 REMARK 500 SER H 127 81.65 52.05 REMARK 500 ALA L 30 -116.13 54.62 REMARK 500 ALA L 51 -35.11 70.52 REMARK 500 ASN L 152 -2.88 70.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3P0V RELATED DB: PDB REMARK 900 FAB DL11 ALONE REMARK 900 RELATED ID: 3P11 RELATED DB: PDB REMARK 900 FAB DL11 WITH HER3 DBREF 3P0Y A 310 514 UNP P00533 EGFR_HUMAN 334 538 DBREF 3P0Y L 1 214 PDB 3P0Y 3P0Y 1 214 DBREF 3P0Y H 1 220 PDB 3P0Y 3P0Y 1 220 SEQADV 3P0Y GLY A 515 UNP P00533 EXPRESSION TAG SEQADV 3P0Y ASN A 516 UNP P00533 EXPRESSION TAG SEQADV 3P0Y SER A 517 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 518 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 519 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 520 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 521 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 522 UNP P00533 EXPRESSION TAG SEQADV 3P0Y HIS A 523 UNP P00533 EXPRESSION TAG SEQRES 1 A 214 ARG LYS VAL CYS ASN GLY ILE GLY ILE GLY GLU PHE LYS SEQRES 2 A 214 ASP SER LEU SER ILE ASN ALA THR ASN ILE LYS HIS PHE SEQRES 3 A 214 LYS ASN CYS THR SER ILE SER GLY ASP LEU HIS ILE LEU SEQRES 4 A 214 PRO VAL ALA PHE ARG GLY ASP SER PHE THR HIS THR PRO SEQRES 5 A 214 PRO LEU ASP PRO GLN GLU LEU ASP ILE LEU LYS THR VAL SEQRES 6 A 214 LYS GLU ILE THR GLY PHE LEU LEU ILE GLN ALA TRP PRO SEQRES 7 A 214 GLU ASN ARG THR ASP LEU HIS ALA PHE GLU ASN LEU GLU SEQRES 8 A 214 ILE ILE ARG GLY ARG THR LYS GLN HIS GLY GLN PHE SER SEQRES 9 A 214 LEU ALA VAL VAL SER LEU ASN ILE THR SER LEU GLY LEU SEQRES 10 A 214 ARG SER LEU LYS GLU ILE SER ASP GLY ASP VAL ILE ILE SEQRES 11 A 214 SER GLY ASN LYS ASN LEU CYS TYR ALA ASN THR ILE ASN SEQRES 12 A 214 TRP LYS LYS LEU PHE GLY THR SER GLY GLN LYS THR LYS SEQRES 13 A 214 ILE ILE SER ASN ARG GLY GLU ASN SER CYS LYS ALA THR SEQRES 14 A 214 GLY GLN VAL CYS HIS ALA LEU CYS SER PRO GLU GLY CYS SEQRES 15 A 214 TRP GLY PRO GLU PRO ARG ASP CYS VAL SER CYS ARG ASN SEQRES 16 A 214 VAL SER ARG GLY ARG GLU CYS VAL ASP LYS GLY ASN SER SEQRES 17 A 214 HIS HIS HIS HIS HIS HIS SEQRES 1 H 228 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 228 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 228 PHE THR LEU SER GLY ASP TRP ILE HIS TRP VAL ARG GLN SEQRES 4 H 228 ALA PRO GLY LYS GLY LEU GLU TRP LEU GLY GLU ILE SER SEQRES 5 H 228 ALA ALA GLY GLY TYR THR ASP TYR ALA ASP SER VAL LYS SEQRES 6 H 228 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 H 228 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 228 ALA VAL TYR TYR CYS ALA ARG GLU SER ARG VAL SER PHE SEQRES 9 H 228 GLU ALA ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 228 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 228 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 228 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 228 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 228 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 228 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 228 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 228 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 228 LYS SER CYS ASP LYS THR HIS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN ASP LEU ALA THR ASP VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 L 214 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 L 214 GLU PRO GLU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS MODRES 3P0Y ASN A 389 ASN GLYCOSYLATION SITE MODRES 3P0Y ASN A 328 ASN GLYCOSYLATION SITE MODRES 3P0Y ASN A 420 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET FUL C 3 10 HET NAG D 1 14 HET NAG D 2 14 HET GOL H 401 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN FUL 6-DEOXY-BETA-L-GALACTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 NAG 6(C8 H15 N O6) FORMUL 5 FUL C6 H12 O5 FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *650(H2 O) HELIX 1 1 ILE A 318 LYS A 322 5 5 HELIX 2 2 ASN A 331 LYS A 336 5 6 HELIX 3 3 LEU A 348 GLY A 354 1 7 HELIX 4 4 ASP A 364 VAL A 374 5 11 HELIX 5 5 LEU A 393 GLU A 397 5 5 HELIX 6 6 LYS A 407 GLY A 410 5 4 HELIX 7 7 TYR A 447 ILE A 451 5 5 HELIX 8 8 ASN A 452 PHE A 457 1 6 HELIX 9 9 GLY A 471 THR A 478 1 8 HELIX 10 10 GLU A 495 CYS A 499 5 5 HELIX 11 11 ARG H 83 THR H 87 5 5 HELIX 12 12 SER H 156 ALA H 158 5 3 HELIX 13 13 SER H 187 LEU H 189 5 3 HELIX 14 14 LYS H 201 ASN H 204 5 4 HELIX 15 15 GLN L 79 PHE L 83 5 5 HELIX 16 16 SER L 121 LYS L 126 1 6 HELIX 17 17 LYS L 183 LYS L 188 1 6 SHEET 1 A 5 VAL A 312 ASN A 314 0 SHEET 2 A 5 SER A 340 SER A 342 1 O SER A 342 N CYS A 313 SHEET 3 A 5 GLU A 376 ILE A 377 1 O GLU A 376 N ILE A 341 SHEET 4 A 5 ILE A 401 ILE A 402 1 O ILE A 401 N ILE A 377 SHEET 5 A 5 GLU A 431 ILE A 432 1 O GLU A 431 N ILE A 402 SHEET 1 B 5 LEU A 345 ILE A 347 0 SHEET 2 B 5 LEU A 381 ILE A 383 1 O LEU A 382 N LEU A 345 SHEET 3 B 5 PHE A 412 VAL A 417 1 O ALA A 415 N ILE A 383 SHEET 4 B 5 ASP A 436 SER A 440 1 O ILE A 438 N LEU A 414 SHEET 5 B 5 THR A 464 ILE A 467 1 O LYS A 465 N ILE A 439 SHEET 1 C 4 GLN H 3 SER H 7 0 SHEET 2 C 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 C 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 C 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 D 6 LEU H 11 VAL H 12 0 SHEET 2 D 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 D 6 ALA H 88 GLU H 95 -1 N TYR H 90 O THR H 107 SHEET 4 D 6 TRP H 33 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 D 6 LEU H 45 SER H 52 -1 O LEU H 48 N TRP H 36 SHEET 6 D 6 TYR H 56 TYR H 59 -1 O ASP H 58 N GLU H 50 SHEET 1 E 4 LEU H 11 VAL H 12 0 SHEET 2 E 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 E 4 ALA H 88 GLU H 95 -1 N TYR H 90 O THR H 107 SHEET 4 E 4 MET H 100D TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 F 4 SER H 120 LEU H 124 0 SHEET 2 F 4 THR H 135 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 F 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 F 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 G 4 SER H 120 LEU H 124 0 SHEET 2 G 4 THR H 135 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 G 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 G 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 H 3 THR H 151 TRP H 154 0 SHEET 2 H 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 H 3 THR H 205 LYS H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 I 4 MET L 4 SER L 7 0 SHEET 2 I 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 I 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 I 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 J 6 SER L 10 SER L 14 0 SHEET 2 J 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 J 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 J 6 VAL L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 J 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 J 6 PHE L 53 LEU L 54 -1 O PHE L 53 N TYR L 49 SHEET 1 K 4 SER L 114 PHE L 118 0 SHEET 2 K 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 K 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 K 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 L 4 ALA L 153 LEU L 154 0 SHEET 2 L 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 L 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 L 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 313 CYS A 338 1555 1555 2.00 SSBOND 2 CYS A 446 CYS A 475 1555 1555 2.06 SSBOND 3 CYS A 482 CYS A 491 1555 1555 2.07 SSBOND 4 CYS A 486 CYS A 499 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 6 CYS H 140 CYS H 196 1555 1555 2.05 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.08 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN A 328 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 389 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 420 C1 NAG D 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O3 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUL C 3 1555 1555 1.42 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.46 CISPEP 1 PHE H 146 PRO H 147 0 -5.70 CISPEP 2 GLU H 148 PRO H 149 0 -2.88 CISPEP 3 SER L 7 PRO L 8 0 -4.39 CISPEP 4 GLU L 92 PRO L 93 0 -8.76 CISPEP 5 GLU L 94 PRO L 95 0 2.62 CISPEP 6 TYR L 140 PRO L 141 0 2.83 CRYST1 81.934 200.677 49.426 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004983 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020232 0.00000