data_3P17 # _entry.id 3P17 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3P17 pdb_00003p17 10.2210/pdb3p17/pdb RCSB RCSB061828 ? ? WWPDB D_1000061828 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3F68 . unspecified PDB 1K22 . unspecified PDB 1K1O . unspecified PDB 3EQ0 . unspecified PDB 2ZQ1 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3P17 _pdbx_database_status.recvd_initial_deposition_date 2010-09-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Biela, A.' 1 'Heine, A.' 2 'Klebe, G.' 3 # _citation.id primary _citation.title 'Impact of ligand and protein desolvation on ligand binding to the S1 pocket of thrombin.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 418 _citation.page_first 350 _citation.page_last 366 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22366545 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2012.01.054 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Biela, A.' 1 ? primary 'Khayat, M.' 2 ? primary 'Tan, H.' 3 ? primary 'Kong, J.' 4 ? primary 'Heine, A.' 5 ? primary 'Hangauer, D.' 6 ? primary 'Klebe, G.' 7 ? # _cell.entry_id 3P17 _cell.length_a 70.000 _cell.length_b 71.400 _cell.length_c 72.500 _cell.angle_alpha 90.00 _cell.angle_beta 100.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3P17 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'thrombin light chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'thrombin heavy chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'Hirudin variant-2' 1534.554 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide' 352.430 1 ? ? ? ? 6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 8 water nat water 18.015 276 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'NGDFEEIPEE(TYS)L' NGDFEEIPEEYL I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASN n 3 2 GLY n 3 3 ASP n 3 4 PHE n 3 5 GLU n 3 6 GLU n 3 7 ILE n 3 8 PRO n 3 9 GLU n 3 10 GLU n 3 11 TYS n 3 12 LEU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name 'medicinal leech' _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'THE PEPTIDE IS SYNTHETIC FRAGMENT.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 3 UNP HIRV2_HIRME P09945 3 NGDFEEIPEEYL 60 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3P17 L 1 ? 36 ? P00734 328 ? 363 ? -5 17 2 2 3P17 H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 3P17 I 1 ? 12 ? P09945 60 ? 71 ? 553 564 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 99P peptide-like . 'D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide' ? 'C20 H24 N4 O2' 352.430 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3P17 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_percent_sol 51.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '15% PEG 8000, 20mM sodium phosphate, 175mM sodium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 107 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-22 _diffrn_detector.details 'Collimating mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bartels Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 3P17 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.43 _reflns.number_obs 63603 _reflns.number_all 63603 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.046 _reflns.pdbx_netI_over_sigmaI 19.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.43 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 95.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.393 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3046 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3P17 _refine.ls_number_reflns_obs 56991 _refine.ls_number_reflns_all 60012 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.43 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1401 _refine.ls_R_factor_all 0.1401 _refine.ls_R_factor_R_work 0.1318 _refine.ls_R_factor_R_free 0.1758 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 3021 _refine.ls_number_parameters 24456 _refine.ls_number_restraints 30696 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1H8D _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3P17 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 16 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 2654.42 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2326 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 276 _refine_hist.number_atoms_total 2649 _refine_hist.d_res_high 1.43 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0281 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.053 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.073 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.018 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.003 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.056 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.090 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3P17 _pdbx_refine.R_factor_all_no_cutoff 0.1401 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1289 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 48917 # _struct.entry_id 3P17 _struct.title 'Thrombin Inhibition by Pyridin Derivatives' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3P17 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;Serine Protease, Kringle, Disulfide Bonds, Blood Coagulation, Blood Clotting, Convertion of Fibrinogen to Fibrin, Cleavage on Pairs of Basic Residues, Thrombin Inhibitor, Glycosylation, HYDROLASE-HYDROLASE INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 HELX_P HELX_P10 10 PRO C 8 ? LEU C 12 ? PRO I 560 LEU I 564 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.097 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.070 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.048 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 D NAG . C1 ? ? H ASN 60 H NAG 600 1_555 ? ? ? ? ? ? ? 1.428 sing N-Glycosylation covale2 covale both ? C TYS 11 C ? ? ? 1_555 C LEU 12 N ? ? I TYS 563 I LEU 564 1_555 ? ? ? ? ? ? ? 1.331 sing ? metalc1 metalc ? ? B LYS 174 O ? ? ? 1_555 G NA . NA ? ? H LYS 169 H NA 1701 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc2 metalc ? ? B THR 177 O ? ? ? 1_555 G NA . NA ? ? H THR 172 H NA 1701 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc3 metalc ? ? B ARG 233 O ? A ? 1_555 H NA . NA ? ? H ARG 221 H NA 1702 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc4 metalc ? ? B LYS 236 O ? ? ? 1_555 H NA . NA ? ? H LYS 224 H NA 1702 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc5 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? H HOH 257 H NA 1702 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc6 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? H HOH 281 H NA 1702 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc7 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? H HOH 294 H NA 1702 1_555 ? ? ? ? ? ? ? 2.900 ? ? metalc8 metalc ? ? J HOH . O ? ? ? 1_555 G NA . NA ? ? H HOH 297 H NA 1701 1_555 ? ? ? ? ? ? ? 2.880 ? ? metalc9 metalc ? ? J HOH . O ? ? ? 1_555 G NA . NA ? ? H HOH 330 H NA 1701 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc10 metalc ? ? J HOH . O ? ? ? 1_555 H NA . NA ? ? H HOH 435 H NA 1702 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc11 metalc ? ? J HOH . O ? ? ? 1_555 G NA . NA ? ? H HOH 437 H NA 1701 1_555 ? ? ? ? ? ? ? 2.355 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 A 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 B 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 B 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 B 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 B 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 B 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 B 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 B 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 A 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 A 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 A 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 A 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 A 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 B 1 2 N LEU B 18 ? N LEU H 33 O LEU B 27 ? O LEU H 41 B 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B 3 4 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 B 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 B 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 B 6 7 O ARG B 62 ? O ARG H 67 N MET B 17 ? N MET H 32 C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # _database_PDB_matrix.entry_id 3P17 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3P17 _atom_sites.fract_transf_matrix[1][1] 0.014286 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002596 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014006 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014019 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 -5 ? ? ? L . n A 1 2 PHE 2 -4 ? ? ? L . n A 1 3 GLY 3 -3 ? ? ? L . n A 1 4 SER 4 -2 ? ? ? L . n A 1 5 GLY 5 -1 ? ? ? L . n A 1 6 GLU 6 0 ? ? ? L . n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 15 ? ? ? L . n A 1 35 GLY 35 16 ? ? ? L . n A 1 36 ARG 36 17 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 ? ? ? H . n B 2 149 THR 149 149 ? ? ? H . n B 2 150 ALA 150 149 ? ? ? H A n B 2 151 ASN 151 149 ? ? ? H B n B 2 152 VAL 152 149 ? ? ? H C n B 2 153 GLY 153 149 ? ? ? H D n B 2 154 LYS 154 149 ? ? ? H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 ASN 1 553 ? ? ? I . n C 3 2 GLY 2 554 ? ? ? I . n C 3 3 ASP 3 555 555 ASP ASP I . n C 3 4 PHE 4 556 556 PHE PHE I . n C 3 5 GLU 5 557 557 GLU GLU I . n C 3 6 GLU 6 558 558 GLU GLU I . n C 3 7 ILE 7 559 559 ILE ILE I . n C 3 8 PRO 8 560 560 PRO PRO I . n C 3 9 GLU 9 561 561 GLU GLU I . n C 3 10 GLU 10 562 562 GLU GLU I . n C 3 11 TYS 11 563 563 TYS TYS I . n C 3 12 LEU 12 564 564 LEU LEU I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 600 600 NAG NAG H . E 5 99P 1 1001 1001 99P 99P H . F 6 PO4 1 1601 1601 PO4 PO4 H . G 7 NA 1 1701 1701 NA NA H . H 7 NA 1 1702 1702 NA NA H . I 8 HOH 1 18 18 HOH HOH L . I 8 HOH 2 19 19 HOH HOH L . I 8 HOH 3 20 20 HOH HOH L . I 8 HOH 4 24 24 HOH HOH L . I 8 HOH 5 30 30 HOH HOH L . I 8 HOH 6 42 42 HOH HOH L . I 8 HOH 7 46 46 HOH HOH L . I 8 HOH 8 57 57 HOH HOH L . I 8 HOH 9 62 62 HOH HOH L . I 8 HOH 10 69 69 HOH HOH L . I 8 HOH 11 71 71 HOH HOH L . I 8 HOH 12 73 73 HOH HOH L . I 8 HOH 13 95 95 HOH HOH L . I 8 HOH 14 111 111 HOH HOH L . I 8 HOH 15 122 122 HOH HOH L . I 8 HOH 16 133 133 HOH HOH L . I 8 HOH 17 147 147 HOH HOH L . I 8 HOH 18 148 148 HOH HOH L . I 8 HOH 19 156 156 HOH HOH L . I 8 HOH 20 157 157 HOH HOH L . I 8 HOH 21 165 165 HOH HOH L . I 8 HOH 22 166 166 HOH HOH L . I 8 HOH 23 171 171 HOH HOH L . I 8 HOH 24 187 187 HOH HOH L . I 8 HOH 25 191 191 HOH HOH L . I 8 HOH 26 197 197 HOH HOH L . I 8 HOH 27 201 201 HOH HOH L . I 8 HOH 28 206 206 HOH HOH L . I 8 HOH 29 211 211 HOH HOH L . I 8 HOH 30 228 228 HOH HOH L . I 8 HOH 31 241 241 HOH HOH L . I 8 HOH 32 248 248 HOH HOH L . I 8 HOH 33 252 252 HOH HOH L . I 8 HOH 34 257 257 HOH HOH L . I 8 HOH 35 261 261 HOH HOH L . I 8 HOH 36 262 262 HOH HOH L . I 8 HOH 37 265 265 HOH HOH L . I 8 HOH 38 365 365 HOH HOH L . J 8 HOH 1 1 1 HOH HOH H . J 8 HOH 2 2 2 HOH HOH H . J 8 HOH 3 4 4 HOH HOH H . J 8 HOH 4 6 6 HOH HOH H . J 8 HOH 5 7 7 HOH HOH H . J 8 HOH 6 8 8 HOH HOH H . J 8 HOH 7 10 10 HOH HOH H . J 8 HOH 8 11 11 HOH HOH H . J 8 HOH 9 12 12 HOH HOH H . J 8 HOH 10 13 13 HOH HOH H . J 8 HOH 11 14 14 HOH HOH H . J 8 HOH 12 15 15 HOH HOH H . J 8 HOH 13 218 218 HOH HOH H . J 8 HOH 14 248 248 HOH HOH H . J 8 HOH 15 249 249 HOH HOH H . J 8 HOH 16 250 250 HOH HOH H . J 8 HOH 17 251 251 HOH HOH H . J 8 HOH 18 252 252 HOH HOH H . J 8 HOH 19 253 253 HOH HOH H . J 8 HOH 20 254 254 HOH HOH H . J 8 HOH 21 255 255 HOH HOH H . J 8 HOH 22 256 256 HOH HOH H . J 8 HOH 23 257 257 HOH HOH H . J 8 HOH 24 258 258 HOH HOH H . J 8 HOH 25 259 259 HOH HOH H . J 8 HOH 26 260 260 HOH HOH H . J 8 HOH 27 261 261 HOH HOH H . J 8 HOH 28 262 262 HOH HOH H . J 8 HOH 29 263 263 HOH HOH H . J 8 HOH 30 264 264 HOH HOH H . J 8 HOH 31 265 265 HOH HOH H . J 8 HOH 32 266 266 HOH HOH H . J 8 HOH 33 267 267 HOH HOH H . J 8 HOH 34 268 268 HOH HOH H . J 8 HOH 35 269 269 HOH HOH H . J 8 HOH 36 270 270 HOH HOH H . J 8 HOH 37 271 271 HOH HOH H . J 8 HOH 38 272 272 HOH HOH H . J 8 HOH 39 273 273 HOH HOH H . J 8 HOH 40 274 274 HOH HOH H . J 8 HOH 41 275 275 HOH HOH H . J 8 HOH 42 276 276 HOH HOH H . J 8 HOH 43 277 277 HOH HOH H . J 8 HOH 44 278 278 HOH HOH H . J 8 HOH 45 279 279 HOH HOH H . J 8 HOH 46 280 280 HOH HOH H . J 8 HOH 47 281 281 HOH HOH H . J 8 HOH 48 282 282 HOH HOH H . J 8 HOH 49 283 283 HOH HOH H . J 8 HOH 50 284 284 HOH HOH H . J 8 HOH 51 285 285 HOH HOH H . J 8 HOH 52 286 286 HOH HOH H . J 8 HOH 53 287 287 HOH HOH H . J 8 HOH 54 288 288 HOH HOH H . J 8 HOH 55 289 289 HOH HOH H . J 8 HOH 56 290 290 HOH HOH H . J 8 HOH 57 291 291 HOH HOH H . J 8 HOH 58 292 292 HOH HOH H . J 8 HOH 59 293 293 HOH HOH H . J 8 HOH 60 294 294 HOH HOH H . J 8 HOH 61 295 295 HOH HOH H . J 8 HOH 62 296 296 HOH HOH H . J 8 HOH 63 297 297 HOH HOH H . J 8 HOH 64 298 298 HOH HOH H . J 8 HOH 65 299 299 HOH HOH H . J 8 HOH 66 300 300 HOH HOH H . J 8 HOH 67 301 301 HOH HOH H . J 8 HOH 68 302 302 HOH HOH H . J 8 HOH 69 303 303 HOH HOH H . J 8 HOH 70 304 304 HOH HOH H . J 8 HOH 71 305 305 HOH HOH H . J 8 HOH 72 306 306 HOH HOH H . J 8 HOH 73 307 307 HOH HOH H . J 8 HOH 74 308 308 HOH HOH H . J 8 HOH 75 309 309 HOH HOH H . J 8 HOH 76 310 310 HOH HOH H . J 8 HOH 77 311 311 HOH HOH H . J 8 HOH 78 312 312 HOH HOH H . J 8 HOH 79 313 313 HOH HOH H . J 8 HOH 80 314 314 HOH HOH H . J 8 HOH 81 315 315 HOH HOH H . J 8 HOH 82 316 316 HOH HOH H . J 8 HOH 83 317 317 HOH HOH H . J 8 HOH 84 318 318 HOH HOH H . J 8 HOH 85 319 319 HOH HOH H . J 8 HOH 86 320 320 HOH HOH H . J 8 HOH 87 321 321 HOH HOH H . J 8 HOH 88 322 322 HOH HOH H . J 8 HOH 89 323 323 HOH HOH H . J 8 HOH 90 324 324 HOH HOH H . J 8 HOH 91 325 325 HOH HOH H . J 8 HOH 92 326 326 HOH HOH H . J 8 HOH 93 327 327 HOH HOH H . J 8 HOH 94 328 328 HOH HOH H . J 8 HOH 95 329 329 HOH HOH H . J 8 HOH 96 330 330 HOH HOH H . J 8 HOH 97 331 331 HOH HOH H . J 8 HOH 98 332 332 HOH HOH H . J 8 HOH 99 333 333 HOH HOH H . J 8 HOH 100 334 334 HOH HOH H . J 8 HOH 101 335 335 HOH HOH H . J 8 HOH 102 336 336 HOH HOH H . J 8 HOH 103 337 337 HOH HOH H . J 8 HOH 104 338 338 HOH HOH H . J 8 HOH 105 339 339 HOH HOH H . J 8 HOH 106 340 340 HOH HOH H . J 8 HOH 107 341 341 HOH HOH H . J 8 HOH 108 342 342 HOH HOH H . J 8 HOH 109 343 343 HOH HOH H . J 8 HOH 110 344 344 HOH HOH H . J 8 HOH 111 345 345 HOH HOH H . J 8 HOH 112 346 346 HOH HOH H . J 8 HOH 113 347 347 HOH HOH H . J 8 HOH 114 348 348 HOH HOH H . J 8 HOH 115 349 349 HOH HOH H . J 8 HOH 116 350 350 HOH HOH H . J 8 HOH 117 351 351 HOH HOH H . J 8 HOH 118 352 352 HOH HOH H . J 8 HOH 119 353 353 HOH HOH H . J 8 HOH 120 354 354 HOH HOH H . J 8 HOH 121 355 355 HOH HOH H . J 8 HOH 122 356 356 HOH HOH H . J 8 HOH 123 357 357 HOH HOH H . J 8 HOH 124 358 358 HOH HOH H . J 8 HOH 125 359 359 HOH HOH H . J 8 HOH 126 360 360 HOH HOH H . J 8 HOH 127 361 361 HOH HOH H . J 8 HOH 128 362 362 HOH HOH H . J 8 HOH 129 363 363 HOH HOH H . J 8 HOH 130 364 364 HOH HOH H . J 8 HOH 131 365 149 HOH HOH H . J 8 HOH 132 366 366 HOH HOH H . J 8 HOH 133 367 367 HOH HOH H . J 8 HOH 134 368 368 HOH HOH H . J 8 HOH 135 369 369 HOH HOH H . J 8 HOH 136 370 370 HOH HOH H . J 8 HOH 137 371 371 HOH HOH H . J 8 HOH 138 372 372 HOH HOH H . J 8 HOH 139 373 373 HOH HOH H . J 8 HOH 140 374 374 HOH HOH H . J 8 HOH 141 375 375 HOH HOH H . J 8 HOH 142 376 376 HOH HOH H . J 8 HOH 143 377 377 HOH HOH H . J 8 HOH 144 378 378 HOH HOH H . J 8 HOH 145 379 379 HOH HOH H . J 8 HOH 146 380 380 HOH HOH H . J 8 HOH 147 381 381 HOH HOH H . J 8 HOH 148 382 382 HOH HOH H . J 8 HOH 149 383 383 HOH HOH H . J 8 HOH 150 384 384 HOH HOH H . J 8 HOH 151 385 385 HOH HOH H . J 8 HOH 152 386 386 HOH HOH H . J 8 HOH 153 387 387 HOH HOH H . J 8 HOH 154 388 388 HOH HOH H . J 8 HOH 155 389 389 HOH HOH H . J 8 HOH 156 390 390 HOH HOH H . J 8 HOH 157 391 391 HOH HOH H . J 8 HOH 158 392 392 HOH HOH H . J 8 HOH 159 393 393 HOH HOH H . J 8 HOH 160 394 394 HOH HOH H . J 8 HOH 161 395 395 HOH HOH H . J 8 HOH 162 396 396 HOH HOH H . J 8 HOH 163 397 397 HOH HOH H . J 8 HOH 164 398 398 HOH HOH H . J 8 HOH 165 399 399 HOH HOH H . J 8 HOH 166 400 400 HOH HOH H . J 8 HOH 167 401 401 HOH HOH H . J 8 HOH 168 402 402 HOH HOH H . J 8 HOH 169 403 403 HOH HOH H . J 8 HOH 170 404 404 HOH HOH H . J 8 HOH 171 405 405 HOH HOH H . J 8 HOH 172 406 406 HOH HOH H . J 8 HOH 173 407 407 HOH HOH H . J 8 HOH 174 408 408 HOH HOH H . J 8 HOH 175 409 409 HOH HOH H . J 8 HOH 176 410 410 HOH HOH H . J 8 HOH 177 411 411 HOH HOH H . J 8 HOH 178 412 412 HOH HOH H . J 8 HOH 179 413 413 HOH HOH H . J 8 HOH 180 414 414 HOH HOH H . J 8 HOH 181 415 415 HOH HOH H . J 8 HOH 182 416 416 HOH HOH H . J 8 HOH 183 417 417 HOH HOH H . J 8 HOH 184 418 418 HOH HOH H . J 8 HOH 185 419 419 HOH HOH H . J 8 HOH 186 420 420 HOH HOH H . J 8 HOH 187 421 421 HOH HOH H . J 8 HOH 188 422 422 HOH HOH H . J 8 HOH 189 423 423 HOH HOH H . J 8 HOH 190 424 424 HOH HOH H . J 8 HOH 191 425 425 HOH HOH H . J 8 HOH 192 426 426 HOH HOH H . J 8 HOH 193 427 427 HOH HOH H . J 8 HOH 194 428 428 HOH HOH H . J 8 HOH 195 429 429 HOH HOH H . J 8 HOH 196 430 430 HOH HOH H . J 8 HOH 197 431 431 HOH HOH H . J 8 HOH 198 432 432 HOH HOH H . J 8 HOH 199 433 433 HOH HOH H . J 8 HOH 200 434 434 HOH HOH H . J 8 HOH 201 435 435 HOH HOH H . J 8 HOH 202 436 436 HOH HOH H . J 8 HOH 203 437 437 HOH HOH H . J 8 HOH 204 438 438 HOH HOH H . J 8 HOH 205 439 439 HOH HOH H . J 8 HOH 206 440 440 HOH HOH H . J 8 HOH 207 441 441 HOH HOH H . J 8 HOH 208 442 442 HOH HOH H . J 8 HOH 209 443 443 HOH HOH H . J 8 HOH 210 444 444 HOH HOH H . J 8 HOH 211 445 445 HOH HOH H . J 8 HOH 212 446 446 HOH HOH H . J 8 HOH 213 447 447 HOH HOH H . J 8 HOH 214 448 448 HOH HOH H . J 8 HOH 215 449 449 HOH HOH H . J 8 HOH 216 450 450 HOH HOH H . J 8 HOH 217 451 451 HOH HOH H . J 8 HOH 218 452 452 HOH HOH H . J 8 HOH 219 453 453 HOH HOH H . J 8 HOH 220 454 454 HOH HOH H . J 8 HOH 221 455 455 HOH HOH H . J 8 HOH 222 456 456 HOH HOH H . J 8 HOH 223 457 457 HOH HOH H . J 8 HOH 224 458 458 HOH HOH H . J 8 HOH 225 459 459 HOH HOH H . J 8 HOH 226 460 460 HOH HOH H . J 8 HOH 227 461 461 HOH HOH H . J 8 HOH 228 462 462 HOH HOH H . J 8 HOH 229 463 463 HOH HOH H . J 8 HOH 230 464 464 HOH HOH H . K 8 HOH 1 126 126 HOH HOH I . K 8 HOH 2 128 128 HOH HOH I . K 8 HOH 3 155 155 HOH HOH I . K 8 HOH 4 198 198 HOH HOH I . K 8 HOH 5 203 203 HOH HOH I . K 8 HOH 6 253 253 HOH HOH I . K 8 HOH 7 268 268 HOH HOH I . K 8 HOH 8 274 274 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_001112 _pdbx_molecule_features.name 'D-PHENYLALANYL-N-(PYRIDIN-3-YLMETHYL)-L-PROLINAMIDE' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001112 _pdbx_molecule.asym_id E # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 53 H ASN 60 G ASN 'GLYCOSYLATION SITE' 2 C TYS 11 I TYS 563 ? TYR O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3300 ? 1 MORE -14 ? 1 'SSA (A^2)' 12860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 H ARG 75 ? B ARG 70 2 1 H ARG 75 ? B ARG 70 3 1 H HOH 283 ? J HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? B THR 177 ? H THR 172 ? 1_555 81.8 ? 2 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 297 ? 1_555 67.7 ? 3 O ? B THR 177 ? H THR 172 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 297 ? 1_555 75.4 ? 4 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 330 ? 1_555 88.5 ? 5 O ? B THR 177 ? H THR 172 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 330 ? 1_555 170.3 ? 6 O ? J HOH . ? H HOH 297 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 330 ? 1_555 100.4 ? 7 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 437 ? 1_555 174.4 ? 8 O ? B THR 177 ? H THR 172 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 437 ? 1_555 96.8 ? 9 O ? J HOH . ? H HOH 297 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 437 ? 1_555 106.7 ? 10 O ? J HOH . ? H HOH 330 ? 1_555 NA ? G NA . ? H NA 1701 ? 1_555 O ? J HOH . ? H HOH 437 ? 1_555 92.8 ? 11 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 94.0 ? 12 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 257 ? 1_555 158.2 ? 13 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 257 ? 1_555 70.9 ? 14 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 281 ? 1_555 105.7 ? 15 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 281 ? 1_555 157.9 ? 16 O ? J HOH . ? H HOH 257 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 281 ? 1_555 87.4 ? 17 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 294 ? 1_555 87.4 ? 18 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 294 ? 1_555 89.0 ? 19 O ? J HOH . ? H HOH 257 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 294 ? 1_555 77.0 ? 20 O ? J HOH . ? H HOH 281 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 294 ? 1_555 82.1 ? 21 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 435 ? 1_555 99.0 ? 22 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 435 ? 1_555 83.7 ? 23 O ? J HOH . ? H HOH 257 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 435 ? 1_555 94.9 ? 24 O ? J HOH . ? H HOH 281 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 435 ? 1_555 102.6 ? 25 O ? J HOH . ? H HOH 294 ? 1_555 NA ? H NA . ? H NA 1702 ? 1_555 O ? J HOH . ? H HOH 435 ? 1_555 170.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-02 2 'Structure model' 1 1 2012-06-20 3 'Structure model' 1 2 2012-12-12 4 'Structure model' 1 3 2013-03-13 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2023-11-01 7 'Structure model' 1 6 2023-12-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Other 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' 10 6 'Structure model' 'Structure summary' 11 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp 2 5 'Structure model' entity 3 5 'Structure model' pdbx_chem_comp_identifier 4 5 'Structure model' pdbx_entity_nonpoly 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' pdbx_struct_special_symmetry 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site 9 5 'Structure model' struct_site_gen 10 6 'Structure model' chem_comp 11 6 'Structure model' chem_comp_atom 12 6 'Structure model' chem_comp_bond 13 6 'Structure model' database_2 14 6 'Structure model' pdbx_initial_refinement_model 15 7 'Structure model' chem_comp_atom 16 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_nonpoly.name' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_PDB_ins_code' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_PDB_ins_code' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.value' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 5 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 19 5 'Structure model' '_struct_conn.pdbx_role' 20 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 6 'Structure model' '_chem_comp.pdbx_synonyms' 35 6 'Structure model' '_database_2.pdbx_DOI' 36 6 'Structure model' '_database_2.pdbx_database_accession' 37 7 'Structure model' '_chem_comp_atom.atom_id' 38 7 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 SHELXL-97 refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 H _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 60 _pdbx_validate_rmsd_bond.PDB_ins_code_1 F _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 H _pdbx_validate_rmsd_bond.auth_comp_id_2 ASN _pdbx_validate_rmsd_bond.auth_seq_id_2 60 _pdbx_validate_rmsd_bond.PDB_ins_code_2 G _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.193 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation -0.143 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB L ASP 1 A ? CG L ASP 1 A ? OD2 L ASP 1 A ? 111.43 118.30 -6.87 0.90 N 2 1 NE L ARG 4 ? ? CZ L ARG 4 ? ? NH1 L ARG 4 ? ? 123.48 120.30 3.18 0.50 N 3 1 CD H ARG 35 ? B NE H ARG 35 ? B CZ H ARG 35 ? B 156.91 123.60 33.31 1.40 N 4 1 NE H ARG 35 ? B CZ H ARG 35 ? B NH1 H ARG 35 ? B 124.73 120.30 4.43 0.50 N 5 1 CD H ARG 50 ? ? NE H ARG 50 ? ? CZ H ARG 50 ? ? 132.24 123.60 8.64 1.40 N 6 1 NE H ARG 93 ? ? CZ H ARG 93 ? ? NH2 H ARG 93 ? ? 117.17 120.30 -3.13 0.50 N 7 1 CA H CYS 182 ? ? CB H CYS 182 ? ? SG H CYS 182 ? ? 120.97 114.20 6.77 1.10 N 8 1 NE H ARG 221 A ? CZ H ARG 221 A ? NH1 H ARG 221 A ? 123.47 120.30 3.17 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -128.62 -89.44 2 1 TYR H 60 A ? -156.23 81.82 3 1 ASN H 60 G ? -157.97 81.72 4 1 HIS H 71 ? ? -132.70 -63.10 5 1 ILE H 79 ? ? -127.89 -61.28 6 1 SER H 195 ? ? -33.20 132.38 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id H _pdbx_validate_planes.auth_seq_id 75 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.096 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 H _pdbx_validate_polymer_linkage.auth_comp_id_1 LYS _pdbx_validate_polymer_linkage.auth_seq_id_1 60 _pdbx_validate_polymer_linkage.PDB_ins_code_1 F _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 H _pdbx_validate_polymer_linkage.auth_comp_id_2 ASN _pdbx_validate_polymer_linkage.auth_seq_id_2 60 _pdbx_validate_polymer_linkage.PDB_ins_code_2 G _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 H SER 36 A OG ? B SER 22 OG 2 1 Y 1 H ASP 186 A CG ? B ASP 193 CG 3 1 Y 1 H ASP 186 A OD1 ? B ASP 193 OD1 4 1 Y 1 H ASP 186 A OD2 ? B ASP 193 OD2 5 1 Y 1 H LYS 236 ? CG ? B LYS 248 CG 6 1 Y 1 H LYS 236 ? CD ? B LYS 248 CD 7 1 Y 1 H LYS 236 ? CE ? B LYS 248 CE 8 1 Y 1 H LYS 236 ? NZ ? B LYS 248 NZ 9 1 Y 1 H GLN 239 ? CG ? B GLN 251 CG 10 1 Y 1 H GLN 239 ? CD ? B GLN 251 CD 11 1 Y 1 H GLN 239 ? OE1 ? B GLN 251 OE1 12 1 Y 1 H GLN 239 ? NE2 ? B GLN 251 NE2 13 1 Y 1 I GLU 558 ? CG ? C GLU 6 CG 14 1 Y 1 I GLU 558 ? CD ? C GLU 6 CD 15 1 Y 1 I GLU 558 ? OE1 ? C GLU 6 OE1 16 1 Y 1 I GLU 558 ? OE2 ? C GLU 6 OE2 17 1 Y 1 I GLU 561 ? CG ? C GLU 9 CG 18 1 Y 1 I GLU 561 ? CD ? C GLU 9 CD 19 1 Y 1 I GLU 561 ? OE1 ? C GLU 9 OE1 20 1 Y 1 I GLU 561 ? OE2 ? C GLU 9 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR -5 ? A THR 1 2 1 Y 1 L PHE -4 ? A PHE 2 3 1 Y 1 L GLY -3 ? A GLY 3 4 1 Y 1 L SER -2 ? A SER 4 5 1 Y 1 L GLY -1 ? A GLY 5 6 1 Y 1 L GLU 0 ? A GLU 6 7 1 Y 1 L ASP 15 ? A ASP 34 8 1 Y 1 L GLY 16 ? A GLY 35 9 1 Y 1 L ARG 17 ? A ARG 36 10 1 Y 1 H TRP 148 ? B TRP 148 11 1 Y 1 H THR 149 ? B THR 149 12 1 Y 1 H ALA 149 A B ALA 150 13 1 Y 1 H ASN 149 B B ASN 151 14 1 Y 1 H VAL 149 C B VAL 152 15 1 Y 1 H GLY 149 D B GLY 153 16 1 Y 1 H LYS 149 E B LYS 154 17 1 Y 1 H GLU 247 ? B GLU 259 18 1 Y 1 I ASN 553 ? C ASN 1 19 1 Y 1 I GLY 554 ? C GLY 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 99P N4 N N N 1 99P C3 C N R 2 99P C5 C N N 3 99P O7 O N N 4 99P C2 C N N 5 99P C1 C Y N 6 99P C8 C Y N 7 99P C12 C Y N 8 99P C9 C Y N 9 99P C11 C Y N 10 99P C10 C Y N 11 99P N6 N N N 12 99P C13 C N S 13 99P C14 C N N 14 99P O15 O N N 15 99P C19 C N N 16 99P C20 C N N 17 99P C21 C N N 18 99P N16 N N N 19 99P C17 C N N 20 99P C18 C Y N 21 99P C22 C Y N 22 99P N23 N Y N 23 99P C24 C Y N 24 99P C25 C Y N 25 99P C26 C Y N 26 99P H4 H N N 27 99P H5 H N N 28 99P H3 H N N 29 99P H1 H N N 30 99P H2 H N N 31 99P H7 H N N 32 99P H11 H N N 33 99P H8 H N N 34 99P H10 H N N 35 99P H9 H N N 36 99P H12 H N N 37 99P H16 H N N 38 99P H17 H N N 39 99P H18 H N N 40 99P H19 H N N 41 99P H20 H N N 42 99P H21 H N N 43 99P H13 H N N 44 99P H14 H N N 45 99P H15 H N N 46 99P H22 H N N 47 99P H23 H N N 48 99P H24 H N N 49 99P H25 H N N 50 ALA N N N N 51 ALA CA C N S 52 ALA C C N N 53 ALA O O N N 54 ALA CB C N N 55 ALA OXT O N N 56 ALA H H N N 57 ALA H2 H N N 58 ALA HA H N N 59 ALA HB1 H N N 60 ALA HB2 H N N 61 ALA HB3 H N N 62 ALA HXT H N N 63 ARG N N N N 64 ARG CA C N S 65 ARG C C N N 66 ARG O O N N 67 ARG CB C N N 68 ARG CG C N N 69 ARG CD C N N 70 ARG NE N N N 71 ARG CZ C N N 72 ARG NH1 N N N 73 ARG NH2 N N N 74 ARG OXT O N N 75 ARG H H N N 76 ARG H2 H N N 77 ARG HA H N N 78 ARG HB2 H N N 79 ARG HB3 H N N 80 ARG HG2 H N N 81 ARG HG3 H N N 82 ARG HD2 H N N 83 ARG HD3 H N N 84 ARG HE H N N 85 ARG HH11 H N N 86 ARG HH12 H N N 87 ARG HH21 H N N 88 ARG HH22 H N N 89 ARG HXT H N N 90 ASN N N N N 91 ASN CA C N S 92 ASN C C N N 93 ASN O O N N 94 ASN CB C N N 95 ASN CG C N N 96 ASN OD1 O N N 97 ASN ND2 N N N 98 ASN OXT O N N 99 ASN H H N N 100 ASN H2 H N N 101 ASN HA H N N 102 ASN HB2 H N N 103 ASN HB3 H N N 104 ASN HD21 H N N 105 ASN HD22 H N N 106 ASN HXT H N N 107 ASP N N N N 108 ASP CA C N S 109 ASP C C N N 110 ASP O O N N 111 ASP CB C N N 112 ASP CG C N N 113 ASP OD1 O N N 114 ASP OD2 O N N 115 ASP OXT O N N 116 ASP H H N N 117 ASP H2 H N N 118 ASP HA H N N 119 ASP HB2 H N N 120 ASP HB3 H N N 121 ASP HD2 H N N 122 ASP HXT H N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 GLN N N N N 138 GLN CA C N S 139 GLN C C N N 140 GLN O O N N 141 GLN CB C N N 142 GLN CG C N N 143 GLN CD C N N 144 GLN OE1 O N N 145 GLN NE2 N N N 146 GLN OXT O N N 147 GLN H H N N 148 GLN H2 H N N 149 GLN HA H N N 150 GLN HB2 H N N 151 GLN HB3 H N N 152 GLN HG2 H N N 153 GLN HG3 H N N 154 GLN HE21 H N N 155 GLN HE22 H N N 156 GLN HXT H N N 157 GLU N N N N 158 GLU CA C N S 159 GLU C C N N 160 GLU O O N N 161 GLU CB C N N 162 GLU CG C N N 163 GLU CD C N N 164 GLU OE1 O N N 165 GLU OE2 O N N 166 GLU OXT O N N 167 GLU H H N N 168 GLU H2 H N N 169 GLU HA H N N 170 GLU HB2 H N N 171 GLU HB3 H N N 172 GLU HG2 H N N 173 GLU HG3 H N N 174 GLU HE2 H N N 175 GLU HXT H N N 176 GLY N N N N 177 GLY CA C N N 178 GLY C C N N 179 GLY O O N N 180 GLY OXT O N N 181 GLY H H N N 182 GLY H2 H N N 183 GLY HA2 H N N 184 GLY HA3 H N N 185 GLY HXT H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 NA NA NA N N 300 NAG C1 C N R 301 NAG C2 C N R 302 NAG C3 C N R 303 NAG C4 C N S 304 NAG C5 C N R 305 NAG C6 C N N 306 NAG C7 C N N 307 NAG C8 C N N 308 NAG N2 N N N 309 NAG O1 O N N 310 NAG O3 O N N 311 NAG O4 O N N 312 NAG O5 O N N 313 NAG O6 O N N 314 NAG O7 O N N 315 NAG H1 H N N 316 NAG H2 H N N 317 NAG H3 H N N 318 NAG H4 H N N 319 NAG H5 H N N 320 NAG H61 H N N 321 NAG H62 H N N 322 NAG H81 H N N 323 NAG H82 H N N 324 NAG H83 H N N 325 NAG HN2 H N N 326 NAG HO1 H N N 327 NAG HO3 H N N 328 NAG HO4 H N N 329 NAG HO6 H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PO4 P P N N 354 PO4 O1 O N N 355 PO4 O2 O N N 356 PO4 O3 O N N 357 PO4 O4 O N N 358 PRO N N N N 359 PRO CA C N S 360 PRO C C N N 361 PRO O O N N 362 PRO CB C N N 363 PRO CG C N N 364 PRO CD C N N 365 PRO OXT O N N 366 PRO H H N N 367 PRO HA H N N 368 PRO HB2 H N N 369 PRO HB3 H N N 370 PRO HG2 H N N 371 PRO HG3 H N N 372 PRO HD2 H N N 373 PRO HD3 H N N 374 PRO HXT H N N 375 SER N N N N 376 SER CA C N S 377 SER C C N N 378 SER O O N N 379 SER CB C N N 380 SER OG O N N 381 SER OXT O N N 382 SER H H N N 383 SER H2 H N N 384 SER HA H N N 385 SER HB2 H N N 386 SER HB3 H N N 387 SER HG H N N 388 SER HXT H N N 389 THR N N N N 390 THR CA C N S 391 THR C C N N 392 THR O O N N 393 THR CB C N R 394 THR OG1 O N N 395 THR CG2 C N N 396 THR OXT O N N 397 THR H H N N 398 THR H2 H N N 399 THR HA H N N 400 THR HB H N N 401 THR HG1 H N N 402 THR HG21 H N N 403 THR HG22 H N N 404 THR HG23 H N N 405 THR HXT H N N 406 TRP N N N N 407 TRP CA C N S 408 TRP C C N N 409 TRP O O N N 410 TRP CB C N N 411 TRP CG C Y N 412 TRP CD1 C Y N 413 TRP CD2 C Y N 414 TRP NE1 N Y N 415 TRP CE2 C Y N 416 TRP CE3 C Y N 417 TRP CZ2 C Y N 418 TRP CZ3 C Y N 419 TRP CH2 C Y N 420 TRP OXT O N N 421 TRP H H N N 422 TRP H2 H N N 423 TRP HA H N N 424 TRP HB2 H N N 425 TRP HB3 H N N 426 TRP HD1 H N N 427 TRP HE1 H N N 428 TRP HE3 H N N 429 TRP HZ2 H N N 430 TRP HZ3 H N N 431 TRP HH2 H N N 432 TRP HXT H N N 433 TYR N N N N 434 TYR CA C N S 435 TYR C C N N 436 TYR O O N N 437 TYR CB C N N 438 TYR CG C Y N 439 TYR CD1 C Y N 440 TYR CD2 C Y N 441 TYR CE1 C Y N 442 TYR CE2 C Y N 443 TYR CZ C Y N 444 TYR OH O N N 445 TYR OXT O N N 446 TYR H H N N 447 TYR H2 H N N 448 TYR HA H N N 449 TYR HB2 H N N 450 TYR HB3 H N N 451 TYR HD1 H N N 452 TYR HD2 H N N 453 TYR HE1 H N N 454 TYR HE2 H N N 455 TYR HH H N N 456 TYR HXT H N N 457 TYS N N N N 458 TYS CA C N S 459 TYS CB C N N 460 TYS CG C Y N 461 TYS CD1 C Y N 462 TYS CD2 C Y N 463 TYS CE1 C Y N 464 TYS CE2 C Y N 465 TYS CZ C Y N 466 TYS OH O N N 467 TYS S S N N 468 TYS O1 O N N 469 TYS O2 O N N 470 TYS O3 O N N 471 TYS C C N N 472 TYS O O N N 473 TYS OXT O N N 474 TYS H H N N 475 TYS H2 H N N 476 TYS HA H N N 477 TYS HB2 H N N 478 TYS HB3 H N N 479 TYS HD1 H N N 480 TYS HD2 H N N 481 TYS HE1 H N N 482 TYS HE2 H N N 483 TYS HO3 H N N 484 TYS HXT H N N 485 VAL N N N N 486 VAL CA C N S 487 VAL C C N N 488 VAL O O N N 489 VAL CB C N N 490 VAL CG1 C N N 491 VAL CG2 C N N 492 VAL OXT O N N 493 VAL H H N N 494 VAL H2 H N N 495 VAL HA H N N 496 VAL HB H N N 497 VAL HG11 H N N 498 VAL HG12 H N N 499 VAL HG13 H N N 500 VAL HG21 H N N 501 VAL HG22 H N N 502 VAL HG23 H N N 503 VAL HXT H N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 99P O15 C14 doub N N 1 99P C19 C20 sing N N 2 99P C19 C13 sing N N 3 99P C17 N16 sing N N 4 99P C17 C18 sing N N 5 99P C20 C21 sing N N 6 99P C14 N16 sing N N 7 99P C14 C13 sing N N 8 99P C21 N6 sing N N 9 99P C13 N6 sing N N 10 99P C18 C26 doub Y N 11 99P C18 C22 sing Y N 12 99P C26 C25 sing Y N 13 99P N6 C5 sing N N 14 99P C22 N23 doub Y N 15 99P C25 C24 doub Y N 16 99P C5 O7 doub N N 17 99P C5 C3 sing N N 18 99P N23 C24 sing Y N 19 99P N4 C3 sing N N 20 99P C3 C2 sing N N 21 99P C8 C9 doub Y N 22 99P C8 C1 sing Y N 23 99P C9 C10 sing Y N 24 99P C2 C1 sing N N 25 99P C1 C12 doub Y N 26 99P C10 C11 doub Y N 27 99P C12 C11 sing Y N 28 99P C2 H1 sing N N 29 99P C2 H2 sing N N 30 99P C3 H3 sing N N 31 99P N4 H4 sing N N 32 99P N4 H5 sing N N 33 99P C8 H7 sing N N 34 99P C9 H8 sing N N 35 99P C10 H9 sing N N 36 99P C11 H10 sing N N 37 99P C12 H11 sing N N 38 99P C13 H12 sing N N 39 99P N16 H13 sing N N 40 99P C17 H14 sing N N 41 99P C17 H15 sing N N 42 99P C19 H16 sing N N 43 99P C19 H17 sing N N 44 99P C20 H18 sing N N 45 99P C20 H19 sing N N 46 99P C21 H20 sing N N 47 99P C21 H21 sing N N 48 99P C22 H22 sing N N 49 99P C24 H23 sing N N 50 99P C25 H24 sing N N 51 99P C26 H25 sing N N 52 ALA N CA sing N N 53 ALA N H sing N N 54 ALA N H2 sing N N 55 ALA CA C sing N N 56 ALA CA CB sing N N 57 ALA CA HA sing N N 58 ALA C O doub N N 59 ALA C OXT sing N N 60 ALA CB HB1 sing N N 61 ALA CB HB2 sing N N 62 ALA CB HB3 sing N N 63 ALA OXT HXT sing N N 64 ARG N CA sing N N 65 ARG N H sing N N 66 ARG N H2 sing N N 67 ARG CA C sing N N 68 ARG CA CB sing N N 69 ARG CA HA sing N N 70 ARG C O doub N N 71 ARG C OXT sing N N 72 ARG CB CG sing N N 73 ARG CB HB2 sing N N 74 ARG CB HB3 sing N N 75 ARG CG CD sing N N 76 ARG CG HG2 sing N N 77 ARG CG HG3 sing N N 78 ARG CD NE sing N N 79 ARG CD HD2 sing N N 80 ARG CD HD3 sing N N 81 ARG NE CZ sing N N 82 ARG NE HE sing N N 83 ARG CZ NH1 sing N N 84 ARG CZ NH2 doub N N 85 ARG NH1 HH11 sing N N 86 ARG NH1 HH12 sing N N 87 ARG NH2 HH21 sing N N 88 ARG NH2 HH22 sing N N 89 ARG OXT HXT sing N N 90 ASN N CA sing N N 91 ASN N H sing N N 92 ASN N H2 sing N N 93 ASN CA C sing N N 94 ASN CA CB sing N N 95 ASN CA HA sing N N 96 ASN C O doub N N 97 ASN C OXT sing N N 98 ASN CB CG sing N N 99 ASN CB HB2 sing N N 100 ASN CB HB3 sing N N 101 ASN CG OD1 doub N N 102 ASN CG ND2 sing N N 103 ASN ND2 HD21 sing N N 104 ASN ND2 HD22 sing N N 105 ASN OXT HXT sing N N 106 ASP N CA sing N N 107 ASP N H sing N N 108 ASP N H2 sing N N 109 ASP CA C sing N N 110 ASP CA CB sing N N 111 ASP CA HA sing N N 112 ASP C O doub N N 113 ASP C OXT sing N N 114 ASP CB CG sing N N 115 ASP CB HB2 sing N N 116 ASP CB HB3 sing N N 117 ASP CG OD1 doub N N 118 ASP CG OD2 sing N N 119 ASP OD2 HD2 sing N N 120 ASP OXT HXT sing N N 121 CYS N CA sing N N 122 CYS N H sing N N 123 CYS N H2 sing N N 124 CYS CA C sing N N 125 CYS CA CB sing N N 126 CYS CA HA sing N N 127 CYS C O doub N N 128 CYS C OXT sing N N 129 CYS CB SG sing N N 130 CYS CB HB2 sing N N 131 CYS CB HB3 sing N N 132 CYS SG HG sing N N 133 CYS OXT HXT sing N N 134 GLN N CA sing N N 135 GLN N H sing N N 136 GLN N H2 sing N N 137 GLN CA C sing N N 138 GLN CA CB sing N N 139 GLN CA HA sing N N 140 GLN C O doub N N 141 GLN C OXT sing N N 142 GLN CB CG sing N N 143 GLN CB HB2 sing N N 144 GLN CB HB3 sing N N 145 GLN CG CD sing N N 146 GLN CG HG2 sing N N 147 GLN CG HG3 sing N N 148 GLN CD OE1 doub N N 149 GLN CD NE2 sing N N 150 GLN NE2 HE21 sing N N 151 GLN NE2 HE22 sing N N 152 GLN OXT HXT sing N N 153 GLU N CA sing N N 154 GLU N H sing N N 155 GLU N H2 sing N N 156 GLU CA C sing N N 157 GLU CA CB sing N N 158 GLU CA HA sing N N 159 GLU C O doub N N 160 GLU C OXT sing N N 161 GLU CB CG sing N N 162 GLU CB HB2 sing N N 163 GLU CB HB3 sing N N 164 GLU CG CD sing N N 165 GLU CG HG2 sing N N 166 GLU CG HG3 sing N N 167 GLU CD OE1 doub N N 168 GLU CD OE2 sing N N 169 GLU OE2 HE2 sing N N 170 GLU OXT HXT sing N N 171 GLY N CA sing N N 172 GLY N H sing N N 173 GLY N H2 sing N N 174 GLY CA C sing N N 175 GLY CA HA2 sing N N 176 GLY CA HA3 sing N N 177 GLY C O doub N N 178 GLY C OXT sing N N 179 GLY OXT HXT sing N N 180 HIS N CA sing N N 181 HIS N H sing N N 182 HIS N H2 sing N N 183 HIS CA C sing N N 184 HIS CA CB sing N N 185 HIS CA HA sing N N 186 HIS C O doub N N 187 HIS C OXT sing N N 188 HIS CB CG sing N N 189 HIS CB HB2 sing N N 190 HIS CB HB3 sing N N 191 HIS CG ND1 sing Y N 192 HIS CG CD2 doub Y N 193 HIS ND1 CE1 doub Y N 194 HIS ND1 HD1 sing N N 195 HIS CD2 NE2 sing Y N 196 HIS CD2 HD2 sing N N 197 HIS CE1 NE2 sing Y N 198 HIS CE1 HE1 sing N N 199 HIS NE2 HE2 sing N N 200 HIS OXT HXT sing N N 201 HOH O H1 sing N N 202 HOH O H2 sing N N 203 ILE N CA sing N N 204 ILE N H sing N N 205 ILE N H2 sing N N 206 ILE CA C sing N N 207 ILE CA CB sing N N 208 ILE CA HA sing N N 209 ILE C O doub N N 210 ILE C OXT sing N N 211 ILE CB CG1 sing N N 212 ILE CB CG2 sing N N 213 ILE CB HB sing N N 214 ILE CG1 CD1 sing N N 215 ILE CG1 HG12 sing N N 216 ILE CG1 HG13 sing N N 217 ILE CG2 HG21 sing N N 218 ILE CG2 HG22 sing N N 219 ILE CG2 HG23 sing N N 220 ILE CD1 HD11 sing N N 221 ILE CD1 HD12 sing N N 222 ILE CD1 HD13 sing N N 223 ILE OXT HXT sing N N 224 LEU N CA sing N N 225 LEU N H sing N N 226 LEU N H2 sing N N 227 LEU CA C sing N N 228 LEU CA CB sing N N 229 LEU CA HA sing N N 230 LEU C O doub N N 231 LEU C OXT sing N N 232 LEU CB CG sing N N 233 LEU CB HB2 sing N N 234 LEU CB HB3 sing N N 235 LEU CG CD1 sing N N 236 LEU CG CD2 sing N N 237 LEU CG HG sing N N 238 LEU CD1 HD11 sing N N 239 LEU CD1 HD12 sing N N 240 LEU CD1 HD13 sing N N 241 LEU CD2 HD21 sing N N 242 LEU CD2 HD22 sing N N 243 LEU CD2 HD23 sing N N 244 LEU OXT HXT sing N N 245 LYS N CA sing N N 246 LYS N H sing N N 247 LYS N H2 sing N N 248 LYS CA C sing N N 249 LYS CA CB sing N N 250 LYS CA HA sing N N 251 LYS C O doub N N 252 LYS C OXT sing N N 253 LYS CB CG sing N N 254 LYS CB HB2 sing N N 255 LYS CB HB3 sing N N 256 LYS CG CD sing N N 257 LYS CG HG2 sing N N 258 LYS CG HG3 sing N N 259 LYS CD CE sing N N 260 LYS CD HD2 sing N N 261 LYS CD HD3 sing N N 262 LYS CE NZ sing N N 263 LYS CE HE2 sing N N 264 LYS CE HE3 sing N N 265 LYS NZ HZ1 sing N N 266 LYS NZ HZ2 sing N N 267 LYS NZ HZ3 sing N N 268 LYS OXT HXT sing N N 269 MET N CA sing N N 270 MET N H sing N N 271 MET N H2 sing N N 272 MET CA C sing N N 273 MET CA CB sing N N 274 MET CA HA sing N N 275 MET C O doub N N 276 MET C OXT sing N N 277 MET CB CG sing N N 278 MET CB HB2 sing N N 279 MET CB HB3 sing N N 280 MET CG SD sing N N 281 MET CG HG2 sing N N 282 MET CG HG3 sing N N 283 MET SD CE sing N N 284 MET CE HE1 sing N N 285 MET CE HE2 sing N N 286 MET CE HE3 sing N N 287 MET OXT HXT sing N N 288 NAG C1 C2 sing N N 289 NAG C1 O1 sing N N 290 NAG C1 O5 sing N N 291 NAG C1 H1 sing N N 292 NAG C2 C3 sing N N 293 NAG C2 N2 sing N N 294 NAG C2 H2 sing N N 295 NAG C3 C4 sing N N 296 NAG C3 O3 sing N N 297 NAG C3 H3 sing N N 298 NAG C4 C5 sing N N 299 NAG C4 O4 sing N N 300 NAG C4 H4 sing N N 301 NAG C5 C6 sing N N 302 NAG C5 O5 sing N N 303 NAG C5 H5 sing N N 304 NAG C6 O6 sing N N 305 NAG C6 H61 sing N N 306 NAG C6 H62 sing N N 307 NAG C7 C8 sing N N 308 NAG C7 N2 sing N N 309 NAG C7 O7 doub N N 310 NAG C8 H81 sing N N 311 NAG C8 H82 sing N N 312 NAG C8 H83 sing N N 313 NAG N2 HN2 sing N N 314 NAG O1 HO1 sing N N 315 NAG O3 HO3 sing N N 316 NAG O4 HO4 sing N N 317 NAG O6 HO6 sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PO4 P O1 doub N N 342 PO4 P O2 sing N N 343 PO4 P O3 sing N N 344 PO4 P O4 sing N N 345 PRO N CA sing N N 346 PRO N CD sing N N 347 PRO N H sing N N 348 PRO CA C sing N N 349 PRO CA CB sing N N 350 PRO CA HA sing N N 351 PRO C O doub N N 352 PRO C OXT sing N N 353 PRO CB CG sing N N 354 PRO CB HB2 sing N N 355 PRO CB HB3 sing N N 356 PRO CG CD sing N N 357 PRO CG HG2 sing N N 358 PRO CG HG3 sing N N 359 PRO CD HD2 sing N N 360 PRO CD HD3 sing N N 361 PRO OXT HXT sing N N 362 SER N CA sing N N 363 SER N H sing N N 364 SER N H2 sing N N 365 SER CA C sing N N 366 SER CA CB sing N N 367 SER CA HA sing N N 368 SER C O doub N N 369 SER C OXT sing N N 370 SER CB OG sing N N 371 SER CB HB2 sing N N 372 SER CB HB3 sing N N 373 SER OG HG sing N N 374 SER OXT HXT sing N N 375 THR N CA sing N N 376 THR N H sing N N 377 THR N H2 sing N N 378 THR CA C sing N N 379 THR CA CB sing N N 380 THR CA HA sing N N 381 THR C O doub N N 382 THR C OXT sing N N 383 THR CB OG1 sing N N 384 THR CB CG2 sing N N 385 THR CB HB sing N N 386 THR OG1 HG1 sing N N 387 THR CG2 HG21 sing N N 388 THR CG2 HG22 sing N N 389 THR CG2 HG23 sing N N 390 THR OXT HXT sing N N 391 TRP N CA sing N N 392 TRP N H sing N N 393 TRP N H2 sing N N 394 TRP CA C sing N N 395 TRP CA CB sing N N 396 TRP CA HA sing N N 397 TRP C O doub N N 398 TRP C OXT sing N N 399 TRP CB CG sing N N 400 TRP CB HB2 sing N N 401 TRP CB HB3 sing N N 402 TRP CG CD1 doub Y N 403 TRP CG CD2 sing Y N 404 TRP CD1 NE1 sing Y N 405 TRP CD1 HD1 sing N N 406 TRP CD2 CE2 doub Y N 407 TRP CD2 CE3 sing Y N 408 TRP NE1 CE2 sing Y N 409 TRP NE1 HE1 sing N N 410 TRP CE2 CZ2 sing Y N 411 TRP CE3 CZ3 doub Y N 412 TRP CE3 HE3 sing N N 413 TRP CZ2 CH2 doub Y N 414 TRP CZ2 HZ2 sing N N 415 TRP CZ3 CH2 sing Y N 416 TRP CZ3 HZ3 sing N N 417 TRP CH2 HH2 sing N N 418 TRP OXT HXT sing N N 419 TYR N CA sing N N 420 TYR N H sing N N 421 TYR N H2 sing N N 422 TYR CA C sing N N 423 TYR CA CB sing N N 424 TYR CA HA sing N N 425 TYR C O doub N N 426 TYR C OXT sing N N 427 TYR CB CG sing N N 428 TYR CB HB2 sing N N 429 TYR CB HB3 sing N N 430 TYR CG CD1 doub Y N 431 TYR CG CD2 sing Y N 432 TYR CD1 CE1 sing Y N 433 TYR CD1 HD1 sing N N 434 TYR CD2 CE2 doub Y N 435 TYR CD2 HD2 sing N N 436 TYR CE1 CZ doub Y N 437 TYR CE1 HE1 sing N N 438 TYR CE2 CZ sing Y N 439 TYR CE2 HE2 sing N N 440 TYR CZ OH sing N N 441 TYR OH HH sing N N 442 TYR OXT HXT sing N N 443 TYS N CA sing N N 444 TYS N H sing N N 445 TYS N H2 sing N N 446 TYS CA CB sing N N 447 TYS CA C sing N N 448 TYS CA HA sing N N 449 TYS CB CG sing N N 450 TYS CB HB2 sing N N 451 TYS CB HB3 sing N N 452 TYS CG CD1 doub Y N 453 TYS CG CD2 sing Y N 454 TYS CD1 CE1 sing Y N 455 TYS CD1 HD1 sing N N 456 TYS CD2 CE2 doub Y N 457 TYS CD2 HD2 sing N N 458 TYS CE1 CZ doub Y N 459 TYS CE1 HE1 sing N N 460 TYS CE2 CZ sing Y N 461 TYS CE2 HE2 sing N N 462 TYS CZ OH sing N N 463 TYS OH S sing N N 464 TYS S O1 doub N N 465 TYS S O2 doub N N 466 TYS S O3 sing N N 467 TYS O3 HO3 sing N N 468 TYS C O doub N N 469 TYS C OXT sing N N 470 TYS OXT HXT sing N N 471 VAL N CA sing N N 472 VAL N H sing N N 473 VAL N H2 sing N N 474 VAL CA C sing N N 475 VAL CA CB sing N N 476 VAL CA HA sing N N 477 VAL C O doub N N 478 VAL C OXT sing N N 479 VAL CB CG1 sing N N 480 VAL CB CG2 sing N N 481 VAL CB HB sing N N 482 VAL CG1 HG11 sing N N 483 VAL CG1 HG12 sing N N 484 VAL CG1 HG13 sing N N 485 VAL CG2 HG21 sing N N 486 VAL CG2 HG22 sing N N 487 VAL CG2 HG23 sing N N 488 VAL OXT HXT sing N N 489 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide' 99P 6 'PHOSPHATE ION' PO4 7 'SODIUM ION' NA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1H8D _pdbx_initial_refinement_model.details ? #