data_3P1D # _entry.id 3P1D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3P1D pdb_00003p1d 10.2210/pdb3p1d/pdb RCSB RCSB061834 ? ? WWPDB D_1000061834 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3P1C . unspecified PDB 3P1E . unspecified PDB 3P1F . unspecified # _pdbx_database_status.entry_id 3P1D _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-09-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Picaud, S.' 2 'Feletar, I.' 3 'Fedorov, O.' 4 'Muniz, J.' 5 'von Delft, F.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Weigelt, J.' 9 'Bountra, C.' 10 'Knapp, S.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Histone recognition and large-scale structural analysis of the human bromodomain family.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 149 _citation.page_first 214 _citation.page_last 231 _citation.year 2012 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22464331 _citation.pdbx_database_id_DOI 10.1016/j.cell.2012.02.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Filippakopoulos, P.' 1 ? primary 'Picaud, S.' 2 ? primary 'Mangos, M.' 3 ? primary 'Keates, T.' 4 ? primary 'Lambert, J.P.' 5 ? primary 'Barsyte-Lovejoy, D.' 6 ? primary 'Felletar, I.' 7 ? primary 'Volkmer, R.' 8 ? primary 'Muller, S.' 9 ? primary 'Pawson, T.' 10 ? primary 'Gingras, A.C.' 11 ? primary 'Arrowsmith, C.H.' 12 ? primary 'Knapp, S.' 13 ? # _cell.entry_id 3P1D _cell.length_a 121.549 _cell.length_b 121.549 _cell.length_c 40.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3P1D _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CREB-binding protein' 14223.349 2 2.3.1.48 ? 'Bromo domain, UNP residues 1081-1197' ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 1 ? ? ? ? 3 non-polymer syn 1-methylpyrrolidin-2-one 99.131 2 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 water nat water 18.015 158 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW LMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSLG ; _entity_poly.pdbx_seq_one_letter_code_can ;SMRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW LMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSLG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ARG n 1 4 LYS n 1 5 LYS n 1 6 ILE n 1 7 PHE n 1 8 LYS n 1 9 PRO n 1 10 GLU n 1 11 GLU n 1 12 LEU n 1 13 ARG n 1 14 GLN n 1 15 ALA n 1 16 LEU n 1 17 MET n 1 18 PRO n 1 19 THR n 1 20 LEU n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 TYR n 1 25 ARG n 1 26 GLN n 1 27 ASP n 1 28 PRO n 1 29 GLU n 1 30 SER n 1 31 LEU n 1 32 PRO n 1 33 PHE n 1 34 ARG n 1 35 GLN n 1 36 PRO n 1 37 VAL n 1 38 ASP n 1 39 PRO n 1 40 GLN n 1 41 LEU n 1 42 LEU n 1 43 GLY n 1 44 ILE n 1 45 PRO n 1 46 ASP n 1 47 TYR n 1 48 PHE n 1 49 ASP n 1 50 ILE n 1 51 VAL n 1 52 LYS n 1 53 ASN n 1 54 PRO n 1 55 MET n 1 56 ASP n 1 57 LEU n 1 58 SER n 1 59 THR n 1 60 ILE n 1 61 LYS n 1 62 ARG n 1 63 LYS n 1 64 LEU n 1 65 ASP n 1 66 THR n 1 67 GLY n 1 68 GLN n 1 69 TYR n 1 70 GLN n 1 71 GLU n 1 72 PRO n 1 73 TRP n 1 74 GLN n 1 75 TYR n 1 76 VAL n 1 77 ASP n 1 78 ASP n 1 79 VAL n 1 80 TRP n 1 81 LEU n 1 82 MET n 1 83 PHE n 1 84 ASN n 1 85 ASN n 1 86 ALA n 1 87 TRP n 1 88 LEU n 1 89 TYR n 1 90 ASN n 1 91 ARG n 1 92 LYS n 1 93 THR n 1 94 SER n 1 95 ARG n 1 96 VAL n 1 97 TYR n 1 98 LYS n 1 99 PHE n 1 100 CYS n 1 101 SER n 1 102 LYS n 1 103 LEU n 1 104 ALA n 1 105 GLU n 1 106 VAL n 1 107 PHE n 1 108 GLU n 1 109 GLN n 1 110 GLU n 1 111 ILE n 1 112 ASP n 1 113 PRO n 1 114 VAL n 1 115 MET n 1 116 GLN n 1 117 SER n 1 118 LEU n 1 119 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CREBBP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CBP_HUMAN _struct_ref.pdbx_db_accession Q92793 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLM FNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSLG ; _struct_ref.pdbx_align_begin 1081 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3P1D A 3 ? 119 ? Q92793 1081 ? 1197 ? 1081 1197 2 1 3P1D B 3 ? 119 ? Q92793 1081 ? 1197 ? 1081 1197 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3P1D SER A 1 ? UNP Q92793 ? ? 'expression tag' 1079 1 1 3P1D MET A 2 ? UNP Q92793 ? ? 'expression tag' 1080 2 2 3P1D SER B 1 ? UNP Q92793 ? ? 'expression tag' 1079 3 2 3P1D MET B 2 ? UNP Q92793 ? ? 'expression tag' 1080 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MB3 non-polymer . 1-methylpyrrolidin-2-one ? 'C5 H9 N O' 99.131 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3P1D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.2M KSCN 20% PEG3350 5% EtGly, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2009-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.542 # _reflns.entry_id 3P1D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.76 _reflns.d_resolution_high 1.860 _reflns.number_obs 18613 _reflns.number_all 18632 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI 11.800 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.860 1.960 100.000 0.629 0.629 1.2 3.600 ? ? ? ? ? ? 1 1 1.960 2.080 100.000 0.395 0.395 2.0 3.700 ? ? ? ? ? ? 2 1 2.080 2.220 100.000 0.248 0.248 3.1 3.700 ? ? ? ? ? ? 3 1 2.220 2.400 100.000 0.168 0.168 4.6 3.700 ? ? ? ? ? ? 4 1 2.400 2.630 100.000 0.116 0.116 6.5 3.800 ? ? ? ? ? ? 5 1 2.630 2.940 100.000 0.079 0.079 9.5 3.800 ? ? ? ? ? ? 6 1 2.940 3.400 100.000 0.056 0.056 11.9 3.800 ? ? ? ? ? ? 7 1 3.400 4.160 100.000 0.036 0.036 18.1 3.900 ? ? ? ? ? ? 8 1 4.160 5.880 100.000 0.031 0.031 19.4 3.900 ? ? ? ? ? ? 9 1 5.880 19.758 97.400 0.027 0.027 17.3 3.800 ? ? ? ? ? ? 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3P1D _refine.ls_number_reflns_obs 17665 _refine.ls_number_reflns_all 18609 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.76 _refine.ls_d_res_high 1.86 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.16952 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16700 _refine.ls_R_factor_R_free 0.21819 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 942 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.500 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 28.168 _refine.aniso_B[1][1] -0.87 _refine.aniso_B[2][2] -0.87 _refine.aniso_B[3][3] 1.30 _refine.aniso_B[1][2] -0.43 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3DWY _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.147 _refine.pdbx_overall_ESU_R_Free 0.141 _refine.overall_SU_ML 0.096 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.933 _refine.overall_SU_R_Cruickshank_DPI 0.1476 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1859 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 2035 _refine_hist.d_res_high 1.86 _refine_hist.d_res_low 19.76 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1945 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1345 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.500 1.984 ? 2648 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.952 3.001 ? 3258 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.117 5.000 ? 227 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.004 24.130 ? 92 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.682 15.000 ? 320 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.364 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 283 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2121 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 393 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.456 3.000 ? 1163 'X-RAY DIFFRACTION' ? r_mcbond_other 1.126 3.000 ? 441 'X-RAY DIFFRACTION' ? r_mcangle_it 4.901 5.000 ? 1890 'X-RAY DIFFRACTION' ? r_scbond_it 7.334 8.000 ? 782 'X-RAY DIFFRACTION' ? r_scangle_it 8.686 11.000 ? 758 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.860 _refine_ls_shell.d_res_low 1.908 _refine_ls_shell.number_reflns_R_work 1267 _refine_ls_shell.R_factor_R_work 0.332 _refine_ls_shell.percent_reflns_obs 99.93 _refine_ls_shell.R_factor_R_free 0.381 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3P1D _struct.title 'Crystal structure of the bromodomain of human CREBBP in complex with N-Methyl-2-pyrrolidone (NMP)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3P1D _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Structural Genomics Consortium, SGC, CBP, CREBBP, CREB binding protein isoform a, KAT3A, RSTS, RST, bromodomain, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 8 ? ARG A 25 ? LYS A 1086 ARG A 1103 1 ? 18 HELX_P HELX_P2 2 SER A 30 ? ARG A 34 ? SER A 1108 ARG A 1112 5 ? 5 HELX_P HELX_P3 3 ASP A 38 ? GLY A 43 ? ASP A 1116 GLY A 1121 1 ? 6 HELX_P HELX_P4 4 ASP A 46 ? VAL A 51 ? ASP A 1124 VAL A 1129 1 ? 6 HELX_P HELX_P5 5 ASP A 56 ? THR A 66 ? ASP A 1134 THR A 1144 1 ? 11 HELX_P HELX_P6 6 GLU A 71 ? ASN A 90 ? GLU A 1149 ASN A 1168 1 ? 20 HELX_P HELX_P7 7 SER A 94 ? GLY A 119 ? SER A 1172 GLY A 1197 1 ? 26 HELX_P HELX_P8 8 LYS B 8 ? ARG B 25 ? LYS B 1086 ARG B 1103 1 ? 18 HELX_P HELX_P9 9 SER B 30 ? ARG B 34 ? SER B 1108 ARG B 1112 5 ? 5 HELX_P HELX_P10 10 ASP B 38 ? GLY B 43 ? ASP B 1116 GLY B 1121 1 ? 6 HELX_P HELX_P11 11 ASP B 46 ? VAL B 51 ? ASP B 1124 VAL B 1129 1 ? 6 HELX_P HELX_P12 12 ASP B 56 ? THR B 66 ? ASP B 1134 THR B 1144 1 ? 11 HELX_P HELX_P13 13 GLU B 71 ? ASN B 90 ? GLU B 1149 ASN B 1168 1 ? 20 HELX_P HELX_P14 14 SER B 94 ? LEU B 118 ? SER B 1172 LEU B 1196 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E K . K ? ? ? 1_555 H HOH . O ? ? B K 1 B HOH 170 1_555 ? ? ? ? ? ? ? 2.689 ? ? metalc2 metalc ? ? E K . K ? ? ? 1_555 B TRP 87 O ? ? B K 1 B TRP 1165 1_555 ? ? ? ? ? ? ? 2.737 ? ? metalc3 metalc ? ? E K . K ? ? ? 1_555 B LEU 88 O ? ? B K 1 B LEU 1166 1_555 ? ? ? ? ? ? ? 3.068 ? ? metalc4 metalc ? ? E K . K ? ? ? 1_555 B ASN 90 O ? ? B K 1 B ASN 1168 1_555 ? ? ? ? ? ? ? 2.703 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 27 A . ? ASP 1105 A PRO 28 A ? PRO 1106 A 1 15.97 2 ASP 27 B . ? ASP 1105 B PRO 28 B ? PRO 1106 B 1 9.95 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SCN 1 ? 3 'BINDING SITE FOR RESIDUE SCN A 1' AC2 Software A MB3 1198 ? 5 'BINDING SITE FOR RESIDUE MB3 A 1198' AC3 Software B K 1 ? 4 'BINDING SITE FOR RESIDUE K B 1' AC4 Software B MB3 2 ? 5 'BINDING SITE FOR RESIDUE MB3 B 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HOH G . ? HOH A 29 . ? 1_555 ? 2 AC1 3 LEU A 31 ? LEU A 1109 . ? 1_555 ? 3 AC1 3 ARG A 95 ? ARG A 1173 . ? 1_555 ? 4 AC2 5 HOH G . ? HOH A 13 . ? 1_555 ? 5 AC2 5 PRO A 32 ? PRO A 1110 . ? 1_555 ? 6 AC2 5 VAL A 37 ? VAL A 1115 . ? 1_555 ? 7 AC2 5 ASN A 90 ? ASN A 1168 . ? 1_555 ? 8 AC2 5 VAL A 96 ? VAL A 1174 . ? 1_555 ? 9 AC3 4 HOH H . ? HOH B 170 . ? 1_555 ? 10 AC3 4 TRP B 87 ? TRP B 1165 . ? 1_555 ? 11 AC3 4 LEU B 88 ? LEU B 1166 . ? 1_555 ? 12 AC3 4 ASN B 90 ? ASN B 1168 . ? 1_555 ? 13 AC4 5 HOH H . ? HOH B 76 . ? 1_555 ? 14 AC4 5 PHE B 33 ? PHE B 1111 . ? 1_555 ? 15 AC4 5 VAL B 37 ? VAL B 1115 . ? 1_555 ? 16 AC4 5 TYR B 47 ? TYR B 1125 . ? 1_555 ? 17 AC4 5 ASN B 90 ? ASN B 1168 . ? 1_555 ? # _atom_sites.entry_id 3P1D _atom_sites.fract_transf_matrix[1][1] 0.008227 _atom_sites.fract_transf_matrix[1][2] 0.004750 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009500 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024857 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1079 ? ? ? A . n A 1 2 MET 2 1080 ? ? ? A . n A 1 3 ARG 3 1081 ? ? ? A . n A 1 4 LYS 4 1082 ? ? ? A . n A 1 5 LYS 5 1083 1083 LYS LYS A . n A 1 6 ILE 6 1084 1084 ILE ILE A . n A 1 7 PHE 7 1085 1085 PHE PHE A . n A 1 8 LYS 8 1086 1086 LYS LYS A . n A 1 9 PRO 9 1087 1087 PRO PRO A . n A 1 10 GLU 10 1088 1088 GLU GLU A . n A 1 11 GLU 11 1089 1089 GLU GLU A . n A 1 12 LEU 12 1090 1090 LEU LEU A . n A 1 13 ARG 13 1091 1091 ARG ARG A . n A 1 14 GLN 14 1092 1092 GLN GLN A . n A 1 15 ALA 15 1093 1093 ALA ALA A . n A 1 16 LEU 16 1094 1094 LEU LEU A . n A 1 17 MET 17 1095 1095 MET MET A . n A 1 18 PRO 18 1096 1096 PRO PRO A . n A 1 19 THR 19 1097 1097 THR THR A . n A 1 20 LEU 20 1098 1098 LEU LEU A . n A 1 21 GLU 21 1099 1099 GLU GLU A . n A 1 22 ALA 22 1100 1100 ALA ALA A . n A 1 23 LEU 23 1101 1101 LEU LEU A . n A 1 24 TYR 24 1102 1102 TYR TYR A . n A 1 25 ARG 25 1103 1103 ARG ARG A . n A 1 26 GLN 26 1104 1104 GLN GLN A . n A 1 27 ASP 27 1105 1105 ASP ASP A . n A 1 28 PRO 28 1106 1106 PRO PRO A . n A 1 29 GLU 29 1107 1107 GLU GLU A . n A 1 30 SER 30 1108 1108 SER SER A . n A 1 31 LEU 31 1109 1109 LEU LEU A . n A 1 32 PRO 32 1110 1110 PRO PRO A . n A 1 33 PHE 33 1111 1111 PHE PHE A . n A 1 34 ARG 34 1112 1112 ARG ARG A . n A 1 35 GLN 35 1113 1113 GLN GLN A . n A 1 36 PRO 36 1114 1114 PRO PRO A . n A 1 37 VAL 37 1115 1115 VAL VAL A . n A 1 38 ASP 38 1116 1116 ASP ASP A . n A 1 39 PRO 39 1117 1117 PRO PRO A . n A 1 40 GLN 40 1118 1118 GLN GLN A . n A 1 41 LEU 41 1119 1119 LEU LEU A . n A 1 42 LEU 42 1120 1120 LEU LEU A . n A 1 43 GLY 43 1121 1121 GLY GLY A . n A 1 44 ILE 44 1122 1122 ILE ILE A . n A 1 45 PRO 45 1123 1123 PRO PRO A . n A 1 46 ASP 46 1124 1124 ASP ASP A . n A 1 47 TYR 47 1125 1125 TYR TYR A . n A 1 48 PHE 48 1126 1126 PHE PHE A . n A 1 49 ASP 49 1127 1127 ASP ASP A . n A 1 50 ILE 50 1128 1128 ILE ILE A . n A 1 51 VAL 51 1129 1129 VAL VAL A . n A 1 52 LYS 52 1130 1130 LYS LYS A . n A 1 53 ASN 53 1131 1131 ASN ASN A . n A 1 54 PRO 54 1132 1132 PRO PRO A . n A 1 55 MET 55 1133 1133 MET MET A . n A 1 56 ASP 56 1134 1134 ASP ASP A . n A 1 57 LEU 57 1135 1135 LEU LEU A . n A 1 58 SER 58 1136 1136 SER SER A . n A 1 59 THR 59 1137 1137 THR THR A . n A 1 60 ILE 60 1138 1138 ILE ILE A . n A 1 61 LYS 61 1139 1139 LYS LYS A . n A 1 62 ARG 62 1140 1140 ARG ARG A . n A 1 63 LYS 63 1141 1141 LYS LYS A . n A 1 64 LEU 64 1142 1142 LEU LEU A . n A 1 65 ASP 65 1143 1143 ASP ASP A . n A 1 66 THR 66 1144 1144 THR THR A . n A 1 67 GLY 67 1145 1145 GLY GLY A . n A 1 68 GLN 68 1146 1146 GLN GLN A . n A 1 69 TYR 69 1147 1147 TYR TYR A . n A 1 70 GLN 70 1148 1148 GLN GLN A . n A 1 71 GLU 71 1149 1149 GLU GLU A . n A 1 72 PRO 72 1150 1150 PRO PRO A . n A 1 73 TRP 73 1151 1151 TRP TRP A . n A 1 74 GLN 74 1152 1152 GLN GLN A . n A 1 75 TYR 75 1153 1153 TYR TYR A . n A 1 76 VAL 76 1154 1154 VAL VAL A . n A 1 77 ASP 77 1155 1155 ASP ASP A . n A 1 78 ASP 78 1156 1156 ASP ASP A . n A 1 79 VAL 79 1157 1157 VAL VAL A . n A 1 80 TRP 80 1158 1158 TRP TRP A . n A 1 81 LEU 81 1159 1159 LEU LEU A . n A 1 82 MET 82 1160 1160 MET MET A . n A 1 83 PHE 83 1161 1161 PHE PHE A . n A 1 84 ASN 84 1162 1162 ASN ASN A . n A 1 85 ASN 85 1163 1163 ASN ASN A . n A 1 86 ALA 86 1164 1164 ALA ALA A . n A 1 87 TRP 87 1165 1165 TRP TRP A . n A 1 88 LEU 88 1166 1166 LEU LEU A . n A 1 89 TYR 89 1167 1167 TYR TYR A . n A 1 90 ASN 90 1168 1168 ASN ASN A . n A 1 91 ARG 91 1169 1169 ARG ARG A . n A 1 92 LYS 92 1170 1170 LYS LYS A . n A 1 93 THR 93 1171 1171 THR THR A . n A 1 94 SER 94 1172 1172 SER SER A . n A 1 95 ARG 95 1173 1173 ARG ARG A . n A 1 96 VAL 96 1174 1174 VAL VAL A . n A 1 97 TYR 97 1175 1175 TYR TYR A . n A 1 98 LYS 98 1176 1176 LYS LYS A . n A 1 99 PHE 99 1177 1177 PHE PHE A . n A 1 100 CYS 100 1178 1178 CYS CYS A . n A 1 101 SER 101 1179 1179 SER SER A . n A 1 102 LYS 102 1180 1180 LYS LYS A . n A 1 103 LEU 103 1181 1181 LEU LEU A . n A 1 104 ALA 104 1182 1182 ALA ALA A . n A 1 105 GLU 105 1183 1183 GLU GLU A . n A 1 106 VAL 106 1184 1184 VAL VAL A . n A 1 107 PHE 107 1185 1185 PHE PHE A . n A 1 108 GLU 108 1186 1186 GLU GLU A . n A 1 109 GLN 109 1187 1187 GLN GLN A . n A 1 110 GLU 110 1188 1188 GLU GLU A . n A 1 111 ILE 111 1189 1189 ILE ILE A . n A 1 112 ASP 112 1190 1190 ASP ASP A . n A 1 113 PRO 113 1191 1191 PRO PRO A . n A 1 114 VAL 114 1192 1192 VAL VAL A . n A 1 115 MET 115 1193 1193 MET MET A . n A 1 116 GLN 116 1194 1194 GLN GLN A . n A 1 117 SER 117 1195 1195 SER SER A . n A 1 118 LEU 118 1196 1196 LEU LEU A . n A 1 119 GLY 119 1197 1197 GLY GLY A . n B 1 1 SER 1 1079 ? ? ? B . n B 1 2 MET 2 1080 ? ? ? B . n B 1 3 ARG 3 1081 ? ? ? B . n B 1 4 LYS 4 1082 ? ? ? B . n B 1 5 LYS 5 1083 1083 LYS LYS B . n B 1 6 ILE 6 1084 1084 ILE ILE B . n B 1 7 PHE 7 1085 1085 PHE PHE B . n B 1 8 LYS 8 1086 1086 LYS LYS B . n B 1 9 PRO 9 1087 1087 PRO PRO B . n B 1 10 GLU 10 1088 1088 GLU GLU B . n B 1 11 GLU 11 1089 1089 GLU GLU B . n B 1 12 LEU 12 1090 1090 LEU LEU B . n B 1 13 ARG 13 1091 1091 ARG ARG B . n B 1 14 GLN 14 1092 1092 GLN GLN B . n B 1 15 ALA 15 1093 1093 ALA ALA B . n B 1 16 LEU 16 1094 1094 LEU LEU B . n B 1 17 MET 17 1095 1095 MET MET B . n B 1 18 PRO 18 1096 1096 PRO PRO B . n B 1 19 THR 19 1097 1097 THR THR B . n B 1 20 LEU 20 1098 1098 LEU LEU B . n B 1 21 GLU 21 1099 1099 GLU GLU B . n B 1 22 ALA 22 1100 1100 ALA ALA B . n B 1 23 LEU 23 1101 1101 LEU LEU B . n B 1 24 TYR 24 1102 1102 TYR TYR B . n B 1 25 ARG 25 1103 1103 ARG ARG B . n B 1 26 GLN 26 1104 1104 GLN GLN B . n B 1 27 ASP 27 1105 1105 ASP ASP B . n B 1 28 PRO 28 1106 1106 PRO PRO B . n B 1 29 GLU 29 1107 1107 GLU GLU B . n B 1 30 SER 30 1108 1108 SER SER B . n B 1 31 LEU 31 1109 1109 LEU LEU B . n B 1 32 PRO 32 1110 1110 PRO PRO B . n B 1 33 PHE 33 1111 1111 PHE PHE B . n B 1 34 ARG 34 1112 1112 ARG ARG B . n B 1 35 GLN 35 1113 1113 GLN GLN B . n B 1 36 PRO 36 1114 1114 PRO PRO B . n B 1 37 VAL 37 1115 1115 VAL VAL B . n B 1 38 ASP 38 1116 1116 ASP ASP B . n B 1 39 PRO 39 1117 1117 PRO PRO B . n B 1 40 GLN 40 1118 1118 GLN GLN B . n B 1 41 LEU 41 1119 1119 LEU LEU B . n B 1 42 LEU 42 1120 1120 LEU LEU B . n B 1 43 GLY 43 1121 1121 GLY GLY B . n B 1 44 ILE 44 1122 1122 ILE ILE B . n B 1 45 PRO 45 1123 1123 PRO PRO B . n B 1 46 ASP 46 1124 1124 ASP ASP B . n B 1 47 TYR 47 1125 1125 TYR TYR B . n B 1 48 PHE 48 1126 1126 PHE PHE B . n B 1 49 ASP 49 1127 1127 ASP ASP B . n B 1 50 ILE 50 1128 1128 ILE ILE B . n B 1 51 VAL 51 1129 1129 VAL VAL B . n B 1 52 LYS 52 1130 1130 LYS LYS B . n B 1 53 ASN 53 1131 1131 ASN ASN B . n B 1 54 PRO 54 1132 1132 PRO PRO B . n B 1 55 MET 55 1133 1133 MET MET B . n B 1 56 ASP 56 1134 1134 ASP ASP B . n B 1 57 LEU 57 1135 1135 LEU LEU B . n B 1 58 SER 58 1136 1136 SER SER B . n B 1 59 THR 59 1137 1137 THR THR B . n B 1 60 ILE 60 1138 1138 ILE ILE B . n B 1 61 LYS 61 1139 1139 LYS LYS B . n B 1 62 ARG 62 1140 1140 ARG ARG B . n B 1 63 LYS 63 1141 1141 LYS LYS B . n B 1 64 LEU 64 1142 1142 LEU LEU B . n B 1 65 ASP 65 1143 1143 ASP ASP B . n B 1 66 THR 66 1144 1144 THR THR B . n B 1 67 GLY 67 1145 1145 GLY GLY B . n B 1 68 GLN 68 1146 1146 GLN GLN B . n B 1 69 TYR 69 1147 1147 TYR TYR B . n B 1 70 GLN 70 1148 1148 GLN GLN B . n B 1 71 GLU 71 1149 1149 GLU GLU B . n B 1 72 PRO 72 1150 1150 PRO PRO B . n B 1 73 TRP 73 1151 1151 TRP TRP B . n B 1 74 GLN 74 1152 1152 GLN GLN B . n B 1 75 TYR 75 1153 1153 TYR TYR B . n B 1 76 VAL 76 1154 1154 VAL VAL B . n B 1 77 ASP 77 1155 1155 ASP ASP B . n B 1 78 ASP 78 1156 1156 ASP ASP B . n B 1 79 VAL 79 1157 1157 VAL VAL B . n B 1 80 TRP 80 1158 1158 TRP TRP B . n B 1 81 LEU 81 1159 1159 LEU LEU B . n B 1 82 MET 82 1160 1160 MET MET B . n B 1 83 PHE 83 1161 1161 PHE PHE B . n B 1 84 ASN 84 1162 1162 ASN ASN B . n B 1 85 ASN 85 1163 1163 ASN ASN B . n B 1 86 ALA 86 1164 1164 ALA ALA B . n B 1 87 TRP 87 1165 1165 TRP TRP B . n B 1 88 LEU 88 1166 1166 LEU LEU B . n B 1 89 TYR 89 1167 1167 TYR TYR B . n B 1 90 ASN 90 1168 1168 ASN ASN B . n B 1 91 ARG 91 1169 1169 ARG ARG B . n B 1 92 LYS 92 1170 1170 LYS LYS B . n B 1 93 THR 93 1171 1171 THR THR B . n B 1 94 SER 94 1172 1172 SER SER B . n B 1 95 ARG 95 1173 1173 ARG ARG B . n B 1 96 VAL 96 1174 1174 VAL VAL B . n B 1 97 TYR 97 1175 1175 TYR TYR B . n B 1 98 LYS 98 1176 1176 LYS LYS B . n B 1 99 PHE 99 1177 1177 PHE PHE B . n B 1 100 CYS 100 1178 1178 CYS CYS B . n B 1 101 SER 101 1179 1179 SER SER B . n B 1 102 LYS 102 1180 1180 LYS LYS B . n B 1 103 LEU 103 1181 1181 LEU LEU B . n B 1 104 ALA 104 1182 1182 ALA ALA B . n B 1 105 GLU 105 1183 1183 GLU GLU B . n B 1 106 VAL 106 1184 1184 VAL VAL B . n B 1 107 PHE 107 1185 1185 PHE PHE B . n B 1 108 GLU 108 1186 1186 GLU GLU B . n B 1 109 GLN 109 1187 1187 GLN GLN B . n B 1 110 GLU 110 1188 1188 GLU GLU B . n B 1 111 ILE 111 1189 1189 ILE ILE B . n B 1 112 ASP 112 1190 1190 ASP ASP B . n B 1 113 PRO 113 1191 1191 PRO PRO B . n B 1 114 VAL 114 1192 1192 VAL VAL B . n B 1 115 MET 115 1193 1193 MET MET B . n B 1 116 GLN 116 1194 1194 GLN GLN B . n B 1 117 SER 117 1195 1195 SER SER B . n B 1 118 LEU 118 1196 1196 LEU LEU B . n B 1 119 GLY 119 1197 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN 1 1 1 SCN SCN A . D 3 MB3 1 1198 1 MB3 MB3 A . E 4 K 1 1 1 K K B . F 3 MB3 1 2 2 MB3 MB3 B . G 5 HOH 1 2 2 HOH HOH A . G 5 HOH 2 4 4 HOH HOH A . G 5 HOH 3 7 7 HOH HOH A . G 5 HOH 4 9 9 HOH HOH A . G 5 HOH 5 10 10 HOH HOH A . G 5 HOH 6 12 12 HOH HOH A . G 5 HOH 7 13 13 HOH HOH A . G 5 HOH 8 14 14 HOH HOH A . G 5 HOH 9 15 15 HOH HOH A . G 5 HOH 10 16 16 HOH HOH A . G 5 HOH 11 17 17 HOH HOH A . G 5 HOH 12 18 18 HOH HOH A . G 5 HOH 13 19 19 HOH HOH A . G 5 HOH 14 20 20 HOH HOH A . G 5 HOH 15 22 22 HOH HOH A . G 5 HOH 16 23 23 HOH HOH A . G 5 HOH 17 26 26 HOH HOH A . G 5 HOH 18 28 28 HOH HOH A . G 5 HOH 19 29 29 HOH HOH A . G 5 HOH 20 30 30 HOH HOH A . G 5 HOH 21 31 31 HOH HOH A . G 5 HOH 22 33 33 HOH HOH A . G 5 HOH 23 34 34 HOH HOH A . G 5 HOH 24 35 35 HOH HOH A . G 5 HOH 25 37 37 HOH HOH A . G 5 HOH 26 38 38 HOH HOH A . G 5 HOH 27 40 40 HOH HOH A . G 5 HOH 28 41 41 HOH HOH A . G 5 HOH 29 43 43 HOH HOH A . G 5 HOH 30 46 46 HOH HOH A . G 5 HOH 31 47 47 HOH HOH A . G 5 HOH 32 48 48 HOH HOH A . G 5 HOH 33 49 49 HOH HOH A . G 5 HOH 34 50 50 HOH HOH A . G 5 HOH 35 51 51 HOH HOH A . G 5 HOH 36 52 52 HOH HOH A . G 5 HOH 37 55 55 HOH HOH A . G 5 HOH 38 58 58 HOH HOH A . G 5 HOH 39 59 59 HOH HOH A . G 5 HOH 40 61 61 HOH HOH A . G 5 HOH 41 62 62 HOH HOH A . G 5 HOH 42 67 67 HOH HOH A . G 5 HOH 43 68 68 HOH HOH A . G 5 HOH 44 70 70 HOH HOH A . G 5 HOH 45 71 71 HOH HOH A . G 5 HOH 46 72 72 HOH HOH A . G 5 HOH 47 73 73 HOH HOH A . G 5 HOH 48 74 74 HOH HOH A . G 5 HOH 49 78 78 HOH HOH A . G 5 HOH 50 79 79 HOH HOH A . G 5 HOH 51 83 83 HOH HOH A . G 5 HOH 52 85 85 HOH HOH A . G 5 HOH 53 88 88 HOH HOH A . G 5 HOH 54 89 89 HOH HOH A . G 5 HOH 55 90 90 HOH HOH A . G 5 HOH 56 92 92 HOH HOH A . G 5 HOH 57 93 93 HOH HOH A . G 5 HOH 58 94 94 HOH HOH A . G 5 HOH 59 96 96 HOH HOH A . G 5 HOH 60 99 99 HOH HOH A . G 5 HOH 61 102 102 HOH HOH A . G 5 HOH 62 103 103 HOH HOH A . G 5 HOH 63 104 104 HOH HOH A . G 5 HOH 64 105 105 HOH HOH A . G 5 HOH 65 106 106 HOH HOH A . G 5 HOH 66 107 107 HOH HOH A . G 5 HOH 67 108 108 HOH HOH A . G 5 HOH 68 110 110 HOH HOH A . G 5 HOH 69 111 111 HOH HOH A . G 5 HOH 70 112 112 HOH HOH A . G 5 HOH 71 115 115 HOH HOH A . G 5 HOH 72 116 116 HOH HOH A . G 5 HOH 73 117 117 HOH HOH A . G 5 HOH 74 118 118 HOH HOH A . G 5 HOH 75 121 121 HOH HOH A . G 5 HOH 76 122 122 HOH HOH A . G 5 HOH 77 123 123 HOH HOH A . G 5 HOH 78 124 124 HOH HOH A . G 5 HOH 79 127 127 HOH HOH A . G 5 HOH 80 128 128 HOH HOH A . G 5 HOH 81 133 133 HOH HOH A . G 5 HOH 82 134 134 HOH HOH A . G 5 HOH 83 136 136 HOH HOH A . G 5 HOH 84 138 138 HOH HOH A . G 5 HOH 85 140 140 HOH HOH A . G 5 HOH 86 143 143 HOH HOH A . G 5 HOH 87 145 145 HOH HOH A . G 5 HOH 88 147 147 HOH HOH A . G 5 HOH 89 148 148 HOH HOH A . G 5 HOH 90 149 149 HOH HOH A . G 5 HOH 91 150 150 HOH HOH A . G 5 HOH 92 151 151 HOH HOH A . G 5 HOH 93 152 152 HOH HOH A . G 5 HOH 94 153 153 HOH HOH A . G 5 HOH 95 154 154 HOH HOH A . G 5 HOH 96 155 155 HOH HOH A . G 5 HOH 97 156 156 HOH HOH A . G 5 HOH 98 158 158 HOH HOH A . G 5 HOH 99 159 159 HOH HOH A . G 5 HOH 100 160 160 HOH HOH A . G 5 HOH 101 168 168 HOH HOH A . G 5 HOH 102 1199 1 HOH HOH A . H 5 HOH 1 11 11 HOH HOH B . H 5 HOH 2 21 21 HOH HOH B . H 5 HOH 3 27 27 HOH HOH B . H 5 HOH 4 32 32 HOH HOH B . H 5 HOH 5 36 36 HOH HOH B . H 5 HOH 6 39 39 HOH HOH B . H 5 HOH 7 42 42 HOH HOH B . H 5 HOH 8 45 45 HOH HOH B . H 5 HOH 9 53 53 HOH HOH B . H 5 HOH 10 54 54 HOH HOH B . H 5 HOH 11 56 56 HOH HOH B . H 5 HOH 12 57 57 HOH HOH B . H 5 HOH 13 60 60 HOH HOH B . H 5 HOH 14 63 63 HOH HOH B . H 5 HOH 15 64 64 HOH HOH B . H 5 HOH 16 65 65 HOH HOH B . H 5 HOH 17 66 66 HOH HOH B . H 5 HOH 18 69 69 HOH HOH B . H 5 HOH 19 75 75 HOH HOH B . H 5 HOH 20 76 76 HOH HOH B . H 5 HOH 21 77 77 HOH HOH B . H 5 HOH 22 80 80 HOH HOH B . H 5 HOH 23 82 82 HOH HOH B . H 5 HOH 24 84 84 HOH HOH B . H 5 HOH 25 86 86 HOH HOH B . H 5 HOH 26 87 87 HOH HOH B . H 5 HOH 27 91 91 HOH HOH B . H 5 HOH 28 95 95 HOH HOH B . H 5 HOH 29 97 97 HOH HOH B . H 5 HOH 30 98 98 HOH HOH B . H 5 HOH 31 101 101 HOH HOH B . H 5 HOH 32 109 109 HOH HOH B . H 5 HOH 33 113 113 HOH HOH B . H 5 HOH 34 114 114 HOH HOH B . H 5 HOH 35 120 120 HOH HOH B . H 5 HOH 36 125 125 HOH HOH B . H 5 HOH 37 129 129 HOH HOH B . H 5 HOH 38 130 130 HOH HOH B . H 5 HOH 39 131 131 HOH HOH B . H 5 HOH 40 132 132 HOH HOH B . H 5 HOH 41 135 135 HOH HOH B . H 5 HOH 42 137 137 HOH HOH B . H 5 HOH 43 139 139 HOH HOH B . H 5 HOH 44 141 141 HOH HOH B . H 5 HOH 45 144 144 HOH HOH B . H 5 HOH 46 146 146 HOH HOH B . H 5 HOH 47 157 157 HOH HOH B . H 5 HOH 48 161 161 HOH HOH B . H 5 HOH 49 162 162 HOH HOH B . H 5 HOH 50 163 163 HOH HOH B . H 5 HOH 51 164 164 HOH HOH B . H 5 HOH 52 165 165 HOH HOH B . H 5 HOH 53 166 166 HOH HOH B . H 5 HOH 54 167 167 HOH HOH B . H 5 HOH 55 169 169 HOH HOH B . H 5 HOH 56 170 170 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? B HOH 170 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B TRP 87 ? B TRP 1165 ? 1_555 90.5 ? 2 O ? H HOH . ? B HOH 170 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B LEU 88 ? B LEU 1166 ? 1_555 70.5 ? 3 O ? B TRP 87 ? B TRP 1165 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B LEU 88 ? B LEU 1166 ? 1_555 72.7 ? 4 O ? H HOH . ? B HOH 170 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B ASN 90 ? B ASN 1168 ? 1_555 165.2 ? 5 O ? B TRP 87 ? B TRP 1165 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B ASN 90 ? B ASN 1168 ? 1_555 78.4 ? 6 O ? B LEU 88 ? B LEU 1166 ? 1_555 K ? E K . ? B K 1 ? 1_555 O ? B ASN 90 ? B ASN 1168 ? 1_555 96.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.value' 13 5 'Structure model' '_struct_conn.pdbx_dist_value' 14 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 26 5 'Structure model' '_struct_ref_seq_dif.details' 27 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 28 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 29 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.860 _diffrn_reflns.pdbx_d_res_low 19.758 _diffrn_reflns.pdbx_number_obs 18613 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.067 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 9.10 _diffrn_reflns.pdbx_redundancy 3.70 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 69380 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.88 19.76 ? ? 0.027 0.027 ? 3.80 97.40 1 4.16 5.88 ? ? 0.031 0.031 ? 3.90 100.00 1 3.40 4.16 ? ? 0.036 0.036 ? 3.90 100.00 1 2.94 3.40 ? ? 0.056 0.056 ? 3.80 100.00 1 2.63 2.94 ? ? 0.079 0.079 ? 3.80 100.00 1 2.40 2.63 ? ? 0.116 0.116 ? 3.80 100.00 1 2.22 2.40 ? ? 0.168 0.168 ? 3.70 100.00 1 2.08 2.22 ? ? 0.248 0.248 ? 3.70 100.00 1 1.96 2.08 ? ? 0.395 0.395 ? 3.70 100.00 1 1.86 1.96 ? ? 0.629 0.629 ? 3.60 100.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -21.1553 16.1885 -4.4579 0.0825 0.0504 0.0795 0.0020 0.0083 0.0032 0.4338 0.8452 0.3781 -0.2314 0.1312 0.0642 -0.0002 0.0114 -0.0677 0.0133 0.0175 0.0700 0.0830 0.0580 -0.0173 'X-RAY DIFFRACTION' 2 ? refined -26.7699 19.6040 -5.8538 0.0708 0.0657 0.0805 -0.0075 -0.0020 -0.0012 0.2482 1.1492 0.6736 -0.1911 -0.0185 0.3817 -0.0117 0.0402 -0.0679 0.0501 0.0057 0.1493 0.0214 -0.0506 0.0061 'X-RAY DIFFRACTION' 3 ? refined -34.0438 10.0806 -16.4556 0.0721 0.0286 0.2096 0.0023 -0.1189 -0.0815 3.1872 28.1382 15.7353 5.0177 -9.3342 1.9093 0.1149 -0.0033 0.0789 -0.6228 -0.0153 1.0601 -0.2844 -0.1738 -0.0996 'X-RAY DIFFRACTION' 4 ? refined -11.8816 -10.0033 -1.6455 0.0970 0.0608 0.0927 -0.0218 -0.0250 0.0256 0.1205 3.1856 1.1128 -0.7385 0.0089 -0.5404 -0.0633 0.0240 0.0054 0.1021 -0.0709 -0.2737 -0.0918 0.1131 0.1343 'X-RAY DIFFRACTION' 5 ? refined -6.0246 -5.1667 7.4643 0.5392 0.2400 0.3083 0.2217 -0.5210 -0.0644 15.6640 9.6962 13.0387 -3.1633 5.3600 -1.6743 -1.0764 -1.5986 0.3950 1.3624 0.4713 -1.7208 0.7703 1.3764 0.6051 'X-RAY DIFFRACTION' 6 ? refined -19.7908 -5.4669 -2.7443 0.1311 0.0093 0.0910 0.0042 -0.0249 0.0026 0.2778 2.1823 1.9728 -0.0676 0.2656 0.1926 -0.0831 0.0352 0.1212 0.0610 -0.0336 0.1424 -0.2097 -0.0635 0.1167 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1083 ? ? A 1139 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 1140 ? ? A 1187 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 1188 ? ? A 1197 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 1085 ? ? B 1138 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 1139 ? ? B 1146 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 1147 ? ? B 1196 ? ? ? ? # _pdbx_phasing_MR.entry_id 3P1D _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 33.350 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 19.760 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 19.760 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.9 2008/10/21 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.1.4 'Thu Nov 13 10:53:32 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 1169 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 103 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 1122 ? ? -117.06 76.88 2 1 ILE B 1084 ? ? -151.35 52.85 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1083 ? CG ? A LYS 5 CG 2 1 Y 1 A LYS 1083 ? CD ? A LYS 5 CD 3 1 Y 1 A LYS 1083 ? CE ? A LYS 5 CE 4 1 Y 1 A LYS 1083 ? NZ ? A LYS 5 NZ 5 1 Y 1 A ILE 1084 ? CG1 ? A ILE 6 CG1 6 1 Y 1 A ILE 1084 ? CG2 ? A ILE 6 CG2 7 1 Y 1 A ILE 1084 ? CD1 ? A ILE 6 CD1 8 1 Y 1 A GLN 1092 ? CD ? A GLN 14 CD 9 1 Y 1 A GLN 1092 ? OE1 ? A GLN 14 OE1 10 1 Y 1 A GLN 1092 ? NE2 ? A GLN 14 NE2 11 1 Y 1 A GLN 1118 ? CD ? A GLN 40 CD 12 1 Y 1 A GLN 1118 ? OE1 ? A GLN 40 OE1 13 1 Y 1 A GLN 1118 ? NE2 ? A GLN 40 NE2 14 1 Y 1 A GLU 1149 ? CG ? A GLU 71 CG 15 1 Y 1 A GLU 1149 ? CD ? A GLU 71 CD 16 1 Y 1 A GLU 1149 ? OE1 ? A GLU 71 OE1 17 1 Y 1 A GLU 1149 ? OE2 ? A GLU 71 OE2 18 1 Y 1 A GLN 1187 ? CD ? A GLN 109 CD 19 1 Y 1 A GLN 1187 ? OE1 ? A GLN 109 OE1 20 1 Y 1 A GLN 1187 ? NE2 ? A GLN 109 NE2 21 1 Y 1 A GLN 1194 ? CG ? A GLN 116 CG 22 1 Y 1 A GLN 1194 ? CD ? A GLN 116 CD 23 1 Y 1 A GLN 1194 ? OE1 ? A GLN 116 OE1 24 1 Y 1 A GLN 1194 ? NE2 ? A GLN 116 NE2 25 1 Y 1 B LYS 1083 ? CG ? B LYS 5 CG 26 1 Y 1 B LYS 1083 ? CD ? B LYS 5 CD 27 1 Y 1 B LYS 1083 ? CE ? B LYS 5 CE 28 1 Y 1 B LYS 1083 ? NZ ? B LYS 5 NZ 29 1 Y 1 B ILE 1084 ? CG1 ? B ILE 6 CG1 30 1 Y 1 B ILE 1084 ? CG2 ? B ILE 6 CG2 31 1 Y 1 B ILE 1084 ? CD1 ? B ILE 6 CD1 32 1 Y 1 B LYS 1086 ? CG ? B LYS 8 CG 33 1 Y 1 B LYS 1086 ? CD ? B LYS 8 CD 34 1 Y 1 B LYS 1086 ? CE ? B LYS 8 CE 35 1 Y 1 B LYS 1086 ? NZ ? B LYS 8 NZ 36 1 Y 1 B GLU 1088 ? CG ? B GLU 10 CG 37 1 Y 1 B GLU 1088 ? CD ? B GLU 10 CD 38 1 Y 1 B GLU 1088 ? OE1 ? B GLU 10 OE1 39 1 Y 1 B GLU 1088 ? OE2 ? B GLU 10 OE2 40 1 Y 1 B GLU 1089 ? CG ? B GLU 11 CG 41 1 Y 1 B GLU 1089 ? CD ? B GLU 11 CD 42 1 Y 1 B GLU 1089 ? OE1 ? B GLU 11 OE1 43 1 Y 1 B GLU 1089 ? OE2 ? B GLU 11 OE2 44 1 Y 1 B ARG 1091 ? CD ? B ARG 13 CD 45 1 Y 1 B ARG 1091 ? NE ? B ARG 13 NE 46 1 Y 1 B ARG 1091 ? CZ ? B ARG 13 CZ 47 1 Y 1 B ARG 1091 ? NH1 ? B ARG 13 NH1 48 1 Y 1 B ARG 1091 ? NH2 ? B ARG 13 NH2 49 1 Y 1 B GLN 1118 ? CG ? B GLN 40 CG 50 1 Y 1 B GLN 1118 ? CD ? B GLN 40 CD 51 1 Y 1 B GLN 1118 ? OE1 ? B GLN 40 OE1 52 1 Y 1 B GLN 1118 ? NE2 ? B GLN 40 NE2 53 1 Y 1 B LYS 1130 ? CE ? B LYS 52 CE 54 1 Y 1 B LYS 1130 ? NZ ? B LYS 52 NZ 55 1 Y 1 B GLN 1148 ? CD ? B GLN 70 CD 56 1 Y 1 B GLN 1148 ? OE1 ? B GLN 70 OE1 57 1 Y 1 B GLN 1148 ? NE2 ? B GLN 70 NE2 58 1 Y 1 B GLU 1149 ? CG ? B GLU 71 CG 59 1 Y 1 B GLU 1149 ? CD ? B GLU 71 CD 60 1 Y 1 B GLU 1149 ? OE1 ? B GLU 71 OE1 61 1 Y 1 B GLU 1149 ? OE2 ? B GLU 71 OE2 62 1 Y 1 B GLN 1187 ? CD ? B GLN 109 CD 63 1 Y 1 B GLN 1187 ? OE1 ? B GLN 109 OE1 64 1 Y 1 B GLN 1187 ? NE2 ? B GLN 109 NE2 65 1 Y 1 B GLN 1194 ? CG ? B GLN 116 CG 66 1 Y 1 B GLN 1194 ? CD ? B GLN 116 CD 67 1 Y 1 B GLN 1194 ? OE1 ? B GLN 116 OE1 68 1 Y 1 B GLN 1194 ? NE2 ? B GLN 116 NE2 69 1 Y 1 B SER 1195 ? OG ? B SER 117 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1079 ? A SER 1 2 1 Y 1 A MET 1080 ? A MET 2 3 1 Y 1 A ARG 1081 ? A ARG 3 4 1 Y 1 A LYS 1082 ? A LYS 4 5 1 Y 1 B SER 1079 ? B SER 1 6 1 Y 1 B MET 1080 ? B MET 2 7 1 Y 1 B ARG 1081 ? B ARG 3 8 1 Y 1 B LYS 1082 ? B LYS 4 9 1 Y 1 B GLY 1197 ? B GLY 119 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 K K K N N 162 LEU N N N N 163 LEU CA C N S 164 LEU C C N N 165 LEU O O N N 166 LEU CB C N N 167 LEU CG C N N 168 LEU CD1 C N N 169 LEU CD2 C N N 170 LEU OXT O N N 171 LEU H H N N 172 LEU H2 H N N 173 LEU HA H N N 174 LEU HB2 H N N 175 LEU HB3 H N N 176 LEU HG H N N 177 LEU HD11 H N N 178 LEU HD12 H N N 179 LEU HD13 H N N 180 LEU HD21 H N N 181 LEU HD22 H N N 182 LEU HD23 H N N 183 LEU HXT H N N 184 LYS N N N N 185 LYS CA C N S 186 LYS C C N N 187 LYS O O N N 188 LYS CB C N N 189 LYS CG C N N 190 LYS CD C N N 191 LYS CE C N N 192 LYS NZ N N N 193 LYS OXT O N N 194 LYS H H N N 195 LYS H2 H N N 196 LYS HA H N N 197 LYS HB2 H N N 198 LYS HB3 H N N 199 LYS HG2 H N N 200 LYS HG3 H N N 201 LYS HD2 H N N 202 LYS HD3 H N N 203 LYS HE2 H N N 204 LYS HE3 H N N 205 LYS HZ1 H N N 206 LYS HZ2 H N N 207 LYS HZ3 H N N 208 LYS HXT H N N 209 MB3 CAA C N N 210 MB3 OAB O N N 211 MB3 CAC C N N 212 MB3 CAD C N N 213 MB3 CAE C N N 214 MB3 CAF C N N 215 MB3 NAG N N N 216 MB3 HAA H N N 217 MB3 HAAA H N N 218 MB3 HAAB H N N 219 MB3 HAC H N N 220 MB3 HACA H N N 221 MB3 HAD H N N 222 MB3 HADA H N N 223 MB3 HAE H N N 224 MB3 HAEA H N N 225 MET N N N N 226 MET CA C N S 227 MET C C N N 228 MET O O N N 229 MET CB C N N 230 MET CG C N N 231 MET SD S N N 232 MET CE C N N 233 MET OXT O N N 234 MET H H N N 235 MET H2 H N N 236 MET HA H N N 237 MET HB2 H N N 238 MET HB3 H N N 239 MET HG2 H N N 240 MET HG3 H N N 241 MET HE1 H N N 242 MET HE2 H N N 243 MET HE3 H N N 244 MET HXT H N N 245 PHE N N N N 246 PHE CA C N S 247 PHE C C N N 248 PHE O O N N 249 PHE CB C N N 250 PHE CG C Y N 251 PHE CD1 C Y N 252 PHE CD2 C Y N 253 PHE CE1 C Y N 254 PHE CE2 C Y N 255 PHE CZ C Y N 256 PHE OXT O N N 257 PHE H H N N 258 PHE H2 H N N 259 PHE HA H N N 260 PHE HB2 H N N 261 PHE HB3 H N N 262 PHE HD1 H N N 263 PHE HD2 H N N 264 PHE HE1 H N N 265 PHE HE2 H N N 266 PHE HZ H N N 267 PHE HXT H N N 268 PRO N N N N 269 PRO CA C N S 270 PRO C C N N 271 PRO O O N N 272 PRO CB C N N 273 PRO CG C N N 274 PRO CD C N N 275 PRO OXT O N N 276 PRO H H N N 277 PRO HA H N N 278 PRO HB2 H N N 279 PRO HB3 H N N 280 PRO HG2 H N N 281 PRO HG3 H N N 282 PRO HD2 H N N 283 PRO HD3 H N N 284 PRO HXT H N N 285 SCN S S N N 286 SCN C C N N 287 SCN N N N N 288 SER N N N N 289 SER CA C N S 290 SER C C N N 291 SER O O N N 292 SER CB C N N 293 SER OG O N N 294 SER OXT O N N 295 SER H H N N 296 SER H2 H N N 297 SER HA H N N 298 SER HB2 H N N 299 SER HB3 H N N 300 SER HG H N N 301 SER HXT H N N 302 THR N N N N 303 THR CA C N S 304 THR C C N N 305 THR O O N N 306 THR CB C N R 307 THR OG1 O N N 308 THR CG2 C N N 309 THR OXT O N N 310 THR H H N N 311 THR H2 H N N 312 THR HA H N N 313 THR HB H N N 314 THR HG1 H N N 315 THR HG21 H N N 316 THR HG22 H N N 317 THR HG23 H N N 318 THR HXT H N N 319 TRP N N N N 320 TRP CA C N S 321 TRP C C N N 322 TRP O O N N 323 TRP CB C N N 324 TRP CG C Y N 325 TRP CD1 C Y N 326 TRP CD2 C Y N 327 TRP NE1 N Y N 328 TRP CE2 C Y N 329 TRP CE3 C Y N 330 TRP CZ2 C Y N 331 TRP CZ3 C Y N 332 TRP CH2 C Y N 333 TRP OXT O N N 334 TRP H H N N 335 TRP H2 H N N 336 TRP HA H N N 337 TRP HB2 H N N 338 TRP HB3 H N N 339 TRP HD1 H N N 340 TRP HE1 H N N 341 TRP HE3 H N N 342 TRP HZ2 H N N 343 TRP HZ3 H N N 344 TRP HH2 H N N 345 TRP HXT H N N 346 TYR N N N N 347 TYR CA C N S 348 TYR C C N N 349 TYR O O N N 350 TYR CB C N N 351 TYR CG C Y N 352 TYR CD1 C Y N 353 TYR CD2 C Y N 354 TYR CE1 C Y N 355 TYR CE2 C Y N 356 TYR CZ C Y N 357 TYR OH O N N 358 TYR OXT O N N 359 TYR H H N N 360 TYR H2 H N N 361 TYR HA H N N 362 TYR HB2 H N N 363 TYR HB3 H N N 364 TYR HD1 H N N 365 TYR HD2 H N N 366 TYR HE1 H N N 367 TYR HE2 H N N 368 TYR HH H N N 369 TYR HXT H N N 370 VAL N N N N 371 VAL CA C N S 372 VAL C C N N 373 VAL O O N N 374 VAL CB C N N 375 VAL CG1 C N N 376 VAL CG2 C N N 377 VAL OXT O N N 378 VAL H H N N 379 VAL H2 H N N 380 VAL HA H N N 381 VAL HB H N N 382 VAL HG11 H N N 383 VAL HG12 H N N 384 VAL HG13 H N N 385 VAL HG21 H N N 386 VAL HG22 H N N 387 VAL HG23 H N N 388 VAL HXT H N N 389 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MB3 CAA NAG sing N N 197 MB3 CAA HAA sing N N 198 MB3 CAA HAAA sing N N 199 MB3 CAA HAAB sing N N 200 MB3 CAF OAB doub N N 201 MB3 CAE CAC sing N N 202 MB3 CAC CAD sing N N 203 MB3 CAC HAC sing N N 204 MB3 CAC HACA sing N N 205 MB3 CAF CAD sing N N 206 MB3 CAD HAD sing N N 207 MB3 CAD HADA sing N N 208 MB3 NAG CAE sing N N 209 MB3 CAE HAE sing N N 210 MB3 CAE HAEA sing N N 211 MB3 NAG CAF sing N N 212 MET N CA sing N N 213 MET N H sing N N 214 MET N H2 sing N N 215 MET CA C sing N N 216 MET CA CB sing N N 217 MET CA HA sing N N 218 MET C O doub N N 219 MET C OXT sing N N 220 MET CB CG sing N N 221 MET CB HB2 sing N N 222 MET CB HB3 sing N N 223 MET CG SD sing N N 224 MET CG HG2 sing N N 225 MET CG HG3 sing N N 226 MET SD CE sing N N 227 MET CE HE1 sing N N 228 MET CE HE2 sing N N 229 MET CE HE3 sing N N 230 MET OXT HXT sing N N 231 PHE N CA sing N N 232 PHE N H sing N N 233 PHE N H2 sing N N 234 PHE CA C sing N N 235 PHE CA CB sing N N 236 PHE CA HA sing N N 237 PHE C O doub N N 238 PHE C OXT sing N N 239 PHE CB CG sing N N 240 PHE CB HB2 sing N N 241 PHE CB HB3 sing N N 242 PHE CG CD1 doub Y N 243 PHE CG CD2 sing Y N 244 PHE CD1 CE1 sing Y N 245 PHE CD1 HD1 sing N N 246 PHE CD2 CE2 doub Y N 247 PHE CD2 HD2 sing N N 248 PHE CE1 CZ doub Y N 249 PHE CE1 HE1 sing N N 250 PHE CE2 CZ sing Y N 251 PHE CE2 HE2 sing N N 252 PHE CZ HZ sing N N 253 PHE OXT HXT sing N N 254 PRO N CA sing N N 255 PRO N CD sing N N 256 PRO N H sing N N 257 PRO CA C sing N N 258 PRO CA CB sing N N 259 PRO CA HA sing N N 260 PRO C O doub N N 261 PRO C OXT sing N N 262 PRO CB CG sing N N 263 PRO CB HB2 sing N N 264 PRO CB HB3 sing N N 265 PRO CG CD sing N N 266 PRO CG HG2 sing N N 267 PRO CG HG3 sing N N 268 PRO CD HD2 sing N N 269 PRO CD HD3 sing N N 270 PRO OXT HXT sing N N 271 SCN S C sing N N 272 SCN C N trip N N 273 SER N CA sing N N 274 SER N H sing N N 275 SER N H2 sing N N 276 SER CA C sing N N 277 SER CA CB sing N N 278 SER CA HA sing N N 279 SER C O doub N N 280 SER C OXT sing N N 281 SER CB OG sing N N 282 SER CB HB2 sing N N 283 SER CB HB3 sing N N 284 SER OG HG sing N N 285 SER OXT HXT sing N N 286 THR N CA sing N N 287 THR N H sing N N 288 THR N H2 sing N N 289 THR CA C sing N N 290 THR CA CB sing N N 291 THR CA HA sing N N 292 THR C O doub N N 293 THR C OXT sing N N 294 THR CB OG1 sing N N 295 THR CB CG2 sing N N 296 THR CB HB sing N N 297 THR OG1 HG1 sing N N 298 THR CG2 HG21 sing N N 299 THR CG2 HG22 sing N N 300 THR CG2 HG23 sing N N 301 THR OXT HXT sing N N 302 TRP N CA sing N N 303 TRP N H sing N N 304 TRP N H2 sing N N 305 TRP CA C sing N N 306 TRP CA CB sing N N 307 TRP CA HA sing N N 308 TRP C O doub N N 309 TRP C OXT sing N N 310 TRP CB CG sing N N 311 TRP CB HB2 sing N N 312 TRP CB HB3 sing N N 313 TRP CG CD1 doub Y N 314 TRP CG CD2 sing Y N 315 TRP CD1 NE1 sing Y N 316 TRP CD1 HD1 sing N N 317 TRP CD2 CE2 doub Y N 318 TRP CD2 CE3 sing Y N 319 TRP NE1 CE2 sing Y N 320 TRP NE1 HE1 sing N N 321 TRP CE2 CZ2 sing Y N 322 TRP CE3 CZ3 doub Y N 323 TRP CE3 HE3 sing N N 324 TRP CZ2 CH2 doub Y N 325 TRP CZ2 HZ2 sing N N 326 TRP CZ3 CH2 sing Y N 327 TRP CZ3 HZ3 sing N N 328 TRP CH2 HH2 sing N N 329 TRP OXT HXT sing N N 330 TYR N CA sing N N 331 TYR N H sing N N 332 TYR N H2 sing N N 333 TYR CA C sing N N 334 TYR CA CB sing N N 335 TYR CA HA sing N N 336 TYR C O doub N N 337 TYR C OXT sing N N 338 TYR CB CG sing N N 339 TYR CB HB2 sing N N 340 TYR CB HB3 sing N N 341 TYR CG CD1 doub Y N 342 TYR CG CD2 sing Y N 343 TYR CD1 CE1 sing Y N 344 TYR CD1 HD1 sing N N 345 TYR CD2 CE2 doub Y N 346 TYR CD2 HD2 sing N N 347 TYR CE1 CZ doub Y N 348 TYR CE1 HE1 sing N N 349 TYR CE2 CZ sing Y N 350 TYR CE2 HE2 sing N N 351 TYR CZ OH sing N N 352 TYR OH HH sing N N 353 TYR OXT HXT sing N N 354 VAL N CA sing N N 355 VAL N H sing N N 356 VAL N H2 sing N N 357 VAL CA C sing N N 358 VAL CA CB sing N N 359 VAL CA HA sing N N 360 VAL C O doub N N 361 VAL C OXT sing N N 362 VAL CB CG1 sing N N 363 VAL CB CG2 sing N N 364 VAL CB HB sing N N 365 VAL CG1 HG11 sing N N 366 VAL CG1 HG12 sing N N 367 VAL CG1 HG13 sing N N 368 VAL CG2 HG21 sing N N 369 VAL CG2 HG22 sing N N 370 VAL CG2 HG23 sing N N 371 VAL OXT HXT sing N N 372 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 1-methylpyrrolidin-2-one MB3 4 'POTASSIUM ION' K 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DWY _pdbx_initial_refinement_model.details ? #