HEADER SIGNALING PROTEIN 01-OCT-10 3P27 TITLE CRYSTAL STRUCTURE OF S. CEREVISIAE HBS1 PROTEIN (GDP-BOUND FORM), A TITLE 2 TRANSLATIONAL GTPASE INVOLVED IN RNA QUALITY CONTROL PATHWAYS AND TITLE 3 INTERACTING WITH DOM34/PELOTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR 1 ALPHA-LIKE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: HBS1, YKR084C, YKR404; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GDP/GTP BINDING DOMAIN, BETA-BARREL, TRANSLATIONAL GTPASE, STRUCTURAL KEYWDS 2 GENOMICS, PARIS-SUD YEAST STRUCTURAL GENOMICS, YSG, SIGNALING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.VAN DEN ELZEN,J.HENRI,N.LAZAR,M.E.GAS,D.DURAND,F.LACROUTE, AUTHOR 2 M.NICAISE,H.VAN TILBEURGH,B.SRAPHIN,M.GRAILLE,PARIS-SUD YEAST AUTHOR 3 STRUCTURAL GENOMICS (YSG) REVDAT 3 14-MAR-12 3P27 1 TITLE VERSN REVDAT 2 15-DEC-10 3P27 1 JRNL REVDAT 1 17-NOV-10 3P27 0 JRNL AUTH A.M.VAN DEN ELZEN,J.HENRI,N.LAZAR,M.E.GAS,D.DURAND, JRNL AUTH 2 F.LACROUTE,M.NICAISE,H.VAN TILBEURGH,B.SERAPHIN,M.GRAILLE JRNL TITL DISSECTION OF DOM34-HBS1 REVEALS INDEPENDENT FUNCTIONS IN JRNL TITL 2 TWO RNA QUALITY CONTROL PATHWAYS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 1446 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 21102444 JRNL DOI 10.1038/NSMB.1963 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.220 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 45371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9805 - 7.3212 0.95 2641 112 0.1913 0.2271 REMARK 3 2 7.3212 - 5.8592 0.97 2673 137 0.2032 0.2883 REMARK 3 3 5.8592 - 5.1329 0.98 2712 145 0.1821 0.2411 REMARK 3 4 5.1329 - 4.6702 0.98 2694 135 0.1537 0.1947 REMARK 3 5 4.6702 - 4.3391 0.98 2695 143 0.1452 0.2223 REMARK 3 6 4.3391 - 4.0856 0.98 2655 160 0.1554 0.2242 REMARK 3 7 4.0856 - 3.8826 0.98 2672 169 0.1895 0.2249 REMARK 3 8 3.8826 - 3.7147 0.98 2681 167 0.1996 0.2472 REMARK 3 9 3.7147 - 3.5725 0.98 2688 137 0.2105 0.2812 REMARK 3 10 3.5725 - 3.4499 0.99 2727 145 0.2350 0.3112 REMARK 3 11 3.4499 - 3.3425 0.98 2704 132 0.2600 0.3154 REMARK 3 12 3.3425 - 3.2474 0.99 2698 151 0.2632 0.3399 REMARK 3 13 3.2474 - 3.1622 0.99 2717 146 0.2690 0.3591 REMARK 3 14 3.1622 - 3.0854 0.99 2736 146 0.2951 0.4119 REMARK 3 15 3.0854 - 3.0155 0.99 2726 138 0.3251 0.3400 REMARK 3 16 3.0155 - 2.9500 0.97 2646 143 0.3301 0.3542 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 21.82 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.91560 REMARK 3 B22 (A**2) : 0.91560 REMARK 3 B33 (A**2) : -1.83120 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 7112 REMARK 3 ANGLE : 1.358 9618 REMARK 3 CHIRALITY : 0.089 1097 REMARK 3 PLANARITY : 0.005 1217 REMARK 3 DIHEDRAL : 19.421 2637 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 139:204 OR RESSEQ REMARK 3 231:254 OR RESSEQ 259:268 OR RESSEQ 270: REMARK 3 280 OR RESSEQ 287:410 OR RESSEQ 418:456 OR REMARK 3 RESSEQ 462:611 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 139:204 OR RESSEQ REMARK 3 231:254 OR RESSEQ 259:268 OR RESSEQ 270: REMARK 3 280 OR RESSEQ 287:410 OR RESSEQ 418:456 OR REMARK 3 RESSEQ 462:611 ) REMARK 3 ATOM PAIRS NUMBER : 3340 REMARK 3 RMSD : 0.043 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3P27 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-10. REMARK 100 THE RCSB ID CODE IS RCSB061863. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CHANNEL CUT CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 19.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM MOPS, 12% PEG 4000, 20% GLYCEROL, REMARK 280 500MM KCL, PH 7.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.98200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.98200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 94.09950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.98200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.98200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.09950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.98200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.98200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 94.09950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.98200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.98200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.09950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 135 REMARK 465 GLU A 136 REMARK 465 LYS A 137 REMARK 465 THR A 138 REMARK 465 GLU A 205 REMARK 465 SER A 206 REMARK 465 GLU A 207 REMARK 465 THR A 208 REMARK 465 MSE A 209 REMARK 465 GLY A 210 REMARK 465 LYS A 211 REMARK 465 SER A 212 REMARK 465 SER A 213 REMARK 465 PHE A 214 REMARK 465 LYS A 215 REMARK 465 PHE A 216 REMARK 465 ALA A 217 REMARK 465 ASN A 224 REMARK 465 GLU A 225 REMARK 465 GLU A 226 REMARK 465 ARG A 227 REMARK 465 GLU A 228 REMARK 465 ARG A 229 REMARK 465 GLY A 230 REMARK 465 HIS A 255 REMARK 465 ARG A 256 REMARK 465 ASP A 257 REMARK 465 PHE A 258 REMARK 465 ASN A 281 REMARK 465 ALA A 282 REMARK 465 PHE A 283 REMARK 465 GLU A 284 REMARK 465 SER A 285 REMARK 465 GLY A 286 REMARK 465 LYS A 413 REMARK 465 THR A 414 REMARK 465 SER A 415 REMARK 465 ASN A 416 REMARK 465 ASP A 417 REMARK 465 GLY A 457 REMARK 465 GLN A 458 REMARK 465 SER A 459 REMARK 465 THR A 460 REMARK 465 ASN A 461 REMARK 465 HIS A 612 REMARK 465 HIS A 613 REMARK 465 HIS A 614 REMARK 465 HIS A 615 REMARK 465 HIS A 616 REMARK 465 HIS A 617 REMARK 465 ASP B 135 REMARK 465 GLU B 136 REMARK 465 LYS B 137 REMARK 465 THR B 138 REMARK 465 GLU B 205 REMARK 465 SER B 206 REMARK 465 GLU B 207 REMARK 465 THR B 208 REMARK 465 MSE B 209 REMARK 465 GLY B 210 REMARK 465 LYS B 211 REMARK 465 SER B 212 REMARK 465 SER B 213 REMARK 465 PHE B 214 REMARK 465 LYS B 215 REMARK 465 PHE B 216 REMARK 465 ASN B 281 REMARK 465 ALA B 282 REMARK 465 PHE B 283 REMARK 465 GLU B 284 REMARK 465 SER B 285 REMARK 465 GLY B 286 REMARK 465 SER B 411 REMARK 465 LYS B 412 REMARK 465 LYS B 413 REMARK 465 THR B 414 REMARK 465 SER B 415 REMARK 465 ASN B 416 REMARK 465 ASP B 417 REMARK 465 GLN B 458 REMARK 465 SER B 459 REMARK 465 THR B 460 REMARK 465 ASN B 461 REMARK 465 HIS B 612 REMARK 465 HIS B 613 REMARK 465 HIS B 614 REMARK 465 HIS B 615 REMARK 465 HIS B 616 REMARK 465 HIS B 617 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 483 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO B 483 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 318 20.33 -144.36 REMARK 500 ASP A 319 60.78 39.42 REMARK 500 TRP A 320 43.25 36.87 REMARK 500 TYR A 360 -71.79 -141.50 REMARK 500 SER A 389 -31.16 -38.28 REMARK 500 ILE A 395 121.19 -29.13 REMARK 500 SER A 427 143.11 -173.54 REMARK 500 GLN A 455 -83.02 -65.19 REMARK 500 LYS A 480 30.94 76.96 REMARK 500 PHE A 513 -152.47 -95.18 REMARK 500 SER A 543 145.32 169.70 REMARK 500 ASP A 546 -93.72 -71.83 REMARK 500 ASN A 549 11.54 -141.68 REMARK 500 SER A 552 132.71 -37.10 REMARK 500 SER B 163 -32.47 -38.80 REMARK 500 ARG B 229 132.65 -39.01 REMARK 500 VAL B 231 -76.63 -32.78 REMARK 500 ASN B 317 20.32 -74.19 REMARK 500 VAL B 318 20.57 -145.25 REMARK 500 ASP B 319 62.11 39.27 REMARK 500 TRP B 320 43.49 35.99 REMARK 500 TYR B 360 -72.95 -141.18 REMARK 500 SER B 389 -31.65 -35.70 REMARK 500 ASN B 392 9.59 -68.60 REMARK 500 ILE B 395 120.66 -29.80 REMARK 500 SER B 427 143.45 -172.19 REMARK 500 GLN B 455 -82.87 -65.64 REMARK 500 GLN B 456 -3.30 53.75 REMARK 500 LYS B 480 31.81 75.98 REMARK 500 PHE B 513 -151.47 -94.83 REMARK 500 SER B 543 144.99 168.46 REMARK 500 ASP B 546 -94.14 -71.25 REMARK 500 ASN B 549 12.34 -142.10 REMARK 500 SER B 552 133.31 -37.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 663 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 663 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3P26 RELATED DB: PDB DBREF 3P27 A 135 611 UNP P32769 HBS1_YEAST 135 611 DBREF 3P27 B 135 611 UNP P32769 HBS1_YEAST 135 611 SEQADV 3P27 HIS A 612 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS A 613 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS A 614 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS A 615 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS A 616 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS A 617 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 612 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 613 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 614 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 615 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 616 UNP P32769 EXPRESSION TAG SEQADV 3P27 HIS B 617 UNP P32769 EXPRESSION TAG SEQRES 1 A 483 ASP GLU LYS THR VAL GLN ARG TYR TYR LYS THR THR VAL SEQRES 2 A 483 PRO THR LYS PRO LYS LYS PRO HIS ASP ILE SER ALA PHE SEQRES 3 A 483 VAL LYS SER ALA LEU PRO HIS LEU SER PHE VAL VAL LEU SEQRES 4 A 483 GLY HIS VAL ASP ALA GLY LYS SER THR LEU MSE GLY ARG SEQRES 5 A 483 LEU LEU TYR ASP LEU ASN ILE VAL ASN GLN SER GLN LEU SEQRES 6 A 483 ARG LYS LEU GLN ARG GLU SER GLU THR MSE GLY LYS SER SEQRES 7 A 483 SER PHE LYS PHE ALA TRP ILE MSE ASP GLN THR ASN GLU SEQRES 8 A 483 GLU ARG GLU ARG GLY VAL THR VAL SER ILE CYS THR SER SEQRES 9 A 483 HIS PHE SER THR HIS ARG ALA ASN PHE THR ILE VAL ASP SEQRES 10 A 483 ALA PRO GLY HIS ARG ASP PHE VAL PRO ASN ALA ILE MSE SEQRES 11 A 483 GLY ILE SER GLN ALA ASP MSE ALA ILE LEU CYS VAL ASP SEQRES 12 A 483 CYS SER THR ASN ALA PHE GLU SER GLY PHE ASP LEU ASP SEQRES 13 A 483 GLY GLN THR LYS GLU HIS MSE LEU LEU ALA SER SER LEU SEQRES 14 A 483 GLY ILE HIS ASN LEU ILE ILE ALA MSE ASN LYS MSE ASP SEQRES 15 A 483 ASN VAL ASP TRP SER GLN GLN ARG PHE GLU GLU ILE LYS SEQRES 16 A 483 SER LYS LEU LEU PRO TYR LEU VAL ASP ILE GLY PHE PHE SEQRES 17 A 483 GLU ASP ASN ILE ASN TRP VAL PRO ILE SER GLY PHE SER SEQRES 18 A 483 GLY GLU GLY VAL TYR LYS ILE GLU TYR THR ASP GLU VAL SEQRES 19 A 483 ARG GLN TRP TYR ASN GLY PRO ASN LEU MSE SER THR LEU SEQRES 20 A 483 GLU ASN ALA ALA PHE LYS ILE SER LYS GLU ASN GLU GLY SEQRES 21 A 483 ILE ASN LYS ASP ASP PRO PHE LEU PHE SER VAL LEU GLU SEQRES 22 A 483 ILE ILE PRO SER LYS LYS THR SER ASN ASP LEU ALA LEU SEQRES 23 A 483 VAL SER GLY LYS LEU GLU SER GLY SER ILE GLN PRO GLY SEQRES 24 A 483 GLU SER LEU THR ILE TYR PRO SER GLU GLN SER CYS ILE SEQRES 25 A 483 VAL ASP LYS ILE GLN VAL GLY SER GLN GLN GLY GLN SER SEQRES 26 A 483 THR ASN HIS GLU GLU THR ASP VAL ALA ILE LYS GLY ASP SEQRES 27 A 483 PHE VAL THR LEU LYS LEU ARG LYS ALA TYR PRO GLU ASP SEQRES 28 A 483 ILE GLN ASN GLY ASP LEU ALA ALA SER VAL ASP TYR SER SEQRES 29 A 483 SER ILE HIS SER ALA GLN CYS PHE VAL LEU GLU LEU THR SEQRES 30 A 483 THR PHE ASP MSE ASN ARG PRO LEU LEU PRO GLY THR PRO SEQRES 31 A 483 PHE ILE LEU PHE ILE GLY VAL LYS GLU GLN PRO ALA ARG SEQRES 32 A 483 ILE LYS ARG LEU ILE SER PHE ILE ASP LYS GLY ASN THR SEQRES 33 A 483 ALA SER LYS LYS LYS ILE ARG HIS LEU GLY SER LYS GLN SEQRES 34 A 483 ARG ALA PHE VAL GLU ILE GLU LEU ILE GLU VAL LYS ARG SEQRES 35 A 483 TRP ILE PRO LEU LEU THR ALA HIS GLU ASN ASP ARG LEU SEQRES 36 A 483 GLY ARG VAL VAL LEU ARG LYS ASP GLY ARG THR ILE ALA SEQRES 37 A 483 ALA GLY LYS ILE SER GLU ILE THR GLN HIS HIS HIS HIS SEQRES 38 A 483 HIS HIS SEQRES 1 B 483 ASP GLU LYS THR VAL GLN ARG TYR TYR LYS THR THR VAL SEQRES 2 B 483 PRO THR LYS PRO LYS LYS PRO HIS ASP ILE SER ALA PHE SEQRES 3 B 483 VAL LYS SER ALA LEU PRO HIS LEU SER PHE VAL VAL LEU SEQRES 4 B 483 GLY HIS VAL ASP ALA GLY LYS SER THR LEU MSE GLY ARG SEQRES 5 B 483 LEU LEU TYR ASP LEU ASN ILE VAL ASN GLN SER GLN LEU SEQRES 6 B 483 ARG LYS LEU GLN ARG GLU SER GLU THR MSE GLY LYS SER SEQRES 7 B 483 SER PHE LYS PHE ALA TRP ILE MSE ASP GLN THR ASN GLU SEQRES 8 B 483 GLU ARG GLU ARG GLY VAL THR VAL SER ILE CYS THR SER SEQRES 9 B 483 HIS PHE SER THR HIS ARG ALA ASN PHE THR ILE VAL ASP SEQRES 10 B 483 ALA PRO GLY HIS ARG ASP PHE VAL PRO ASN ALA ILE MSE SEQRES 11 B 483 GLY ILE SER GLN ALA ASP MSE ALA ILE LEU CYS VAL ASP SEQRES 12 B 483 CYS SER THR ASN ALA PHE GLU SER GLY PHE ASP LEU ASP SEQRES 13 B 483 GLY GLN THR LYS GLU HIS MSE LEU LEU ALA SER SER LEU SEQRES 14 B 483 GLY ILE HIS ASN LEU ILE ILE ALA MSE ASN LYS MSE ASP SEQRES 15 B 483 ASN VAL ASP TRP SER GLN GLN ARG PHE GLU GLU ILE LYS SEQRES 16 B 483 SER LYS LEU LEU PRO TYR LEU VAL ASP ILE GLY PHE PHE SEQRES 17 B 483 GLU ASP ASN ILE ASN TRP VAL PRO ILE SER GLY PHE SER SEQRES 18 B 483 GLY GLU GLY VAL TYR LYS ILE GLU TYR THR ASP GLU VAL SEQRES 19 B 483 ARG GLN TRP TYR ASN GLY PRO ASN LEU MSE SER THR LEU SEQRES 20 B 483 GLU ASN ALA ALA PHE LYS ILE SER LYS GLU ASN GLU GLY SEQRES 21 B 483 ILE ASN LYS ASP ASP PRO PHE LEU PHE SER VAL LEU GLU SEQRES 22 B 483 ILE ILE PRO SER LYS LYS THR SER ASN ASP LEU ALA LEU SEQRES 23 B 483 VAL SER GLY LYS LEU GLU SER GLY SER ILE GLN PRO GLY SEQRES 24 B 483 GLU SER LEU THR ILE TYR PRO SER GLU GLN SER CYS ILE SEQRES 25 B 483 VAL ASP LYS ILE GLN VAL GLY SER GLN GLN GLY GLN SER SEQRES 26 B 483 THR ASN HIS GLU GLU THR ASP VAL ALA ILE LYS GLY ASP SEQRES 27 B 483 PHE VAL THR LEU LYS LEU ARG LYS ALA TYR PRO GLU ASP SEQRES 28 B 483 ILE GLN ASN GLY ASP LEU ALA ALA SER VAL ASP TYR SER SEQRES 29 B 483 SER ILE HIS SER ALA GLN CYS PHE VAL LEU GLU LEU THR SEQRES 30 B 483 THR PHE ASP MSE ASN ARG PRO LEU LEU PRO GLY THR PRO SEQRES 31 B 483 PHE ILE LEU PHE ILE GLY VAL LYS GLU GLN PRO ALA ARG SEQRES 32 B 483 ILE LYS ARG LEU ILE SER PHE ILE ASP LYS GLY ASN THR SEQRES 33 B 483 ALA SER LYS LYS LYS ILE ARG HIS LEU GLY SER LYS GLN SEQRES 34 B 483 ARG ALA PHE VAL GLU ILE GLU LEU ILE GLU VAL LYS ARG SEQRES 35 B 483 TRP ILE PRO LEU LEU THR ALA HIS GLU ASN ASP ARG LEU SEQRES 36 B 483 GLY ARG VAL VAL LEU ARG LYS ASP GLY ARG THR ILE ALA SEQRES 37 B 483 ALA GLY LYS ILE SER GLU ILE THR GLN HIS HIS HIS HIS SEQRES 38 B 483 HIS HIS MODRES 3P27 MSE A 184 MET SELENOMETHIONINE MODRES 3P27 MSE A 220 MET SELENOMETHIONINE MODRES 3P27 MSE A 264 MET SELENOMETHIONINE MODRES 3P27 MSE A 271 MET SELENOMETHIONINE MODRES 3P27 MSE A 297 MET SELENOMETHIONINE MODRES 3P27 MSE A 312 MET SELENOMETHIONINE MODRES 3P27 MSE A 315 MET SELENOMETHIONINE MODRES 3P27 MSE A 378 MET SELENOMETHIONINE MODRES 3P27 MSE A 515 MET SELENOMETHIONINE MODRES 3P27 MSE B 184 MET SELENOMETHIONINE MODRES 3P27 MSE B 220 MET SELENOMETHIONINE MODRES 3P27 MSE B 264 MET SELENOMETHIONINE MODRES 3P27 MSE B 271 MET SELENOMETHIONINE MODRES 3P27 MSE B 297 MET SELENOMETHIONINE MODRES 3P27 MSE B 312 MET SELENOMETHIONINE MODRES 3P27 MSE B 315 MET SELENOMETHIONINE MODRES 3P27 MSE B 378 MET SELENOMETHIONINE MODRES 3P27 MSE B 515 MET SELENOMETHIONINE HET MSE A 184 8 HET MSE A 220 8 HET MSE A 264 8 HET MSE A 271 8 HET MSE A 297 8 HET MSE A 312 8 HET MSE A 315 8 HET MSE A 378 8 HET MSE A 515 8 HET MSE B 184 8 HET MSE B 220 8 HET MSE B 264 8 HET MSE B 271 8 HET MSE B 297 8 HET MSE B 312 8 HET MSE B 315 8 HET MSE B 378 8 HET MSE B 515 8 HET GDP A 663 28 HET GDP B 663 28 HETNAM MSE SELENOMETHIONINE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 5 HOH *64(H2 O) HELIX 1 1 ASP A 156 ALA A 164 1 9 HELIX 2 2 GLY A 179 LEU A 191 1 13 HELIX 3 3 SER A 197 GLN A 203 1 7 HELIX 4 4 TRP A 218 THR A 223 1 6 HELIX 5 5 VAL A 259 ALA A 269 1 11 HELIX 6 6 ASP A 290 LEU A 303 1 14 HELIX 7 7 LYS A 314 ASP A 319 5 6 HELIX 8 8 SER A 321 GLY A 340 1 20 HELIX 9 9 PHE A 342 ASP A 344 5 3 HELIX 10 10 THR A 365 GLN A 370 1 6 HELIX 11 11 ASN A 376 ASN A 392 1 17 HELIX 12 12 TYR A 482 ILE A 486 5 5 HELIX 13 13 ASP B 156 ALA B 164 1 9 HELIX 14 14 GLY B 179 LEU B 191 1 13 HELIX 15 15 ASN B 195 GLN B 203 1 9 HELIX 16 16 ALA B 217 THR B 223 1 7 HELIX 17 17 PHE B 258 ALA B 269 1 12 HELIX 18 18 ASP B 290 LEU B 303 1 14 HELIX 19 19 LYS B 314 ASP B 319 5 6 HELIX 20 20 SER B 321 GLY B 340 1 20 HELIX 21 21 PHE B 342 ASP B 344 5 3 HELIX 22 22 THR B 365 GLN B 370 1 6 HELIX 23 23 ASN B 376 ASN B 392 1 17 HELIX 24 24 TYR B 482 ILE B 486 5 5 SHEET 1 A 6 CYS A 236 SER A 241 0 SHEET 2 A 6 ASN A 246 ASP A 251 -1 O ASP A 251 N CYS A 236 SHEET 3 A 6 HIS A 167 GLY A 174 1 N PHE A 170 O VAL A 250 SHEET 4 A 6 MSE A 271 ASP A 277 1 O ILE A 273 N VAL A 171 SHEET 5 A 6 LEU A 308 ASN A 313 1 O ASN A 313 N VAL A 276 SHEET 6 A 6 ILE A 346 PRO A 350 1 O ASN A 347 N ILE A 310 SHEET 1 B 8 GLU A 464 THR A 465 0 SHEET 2 B 8 GLN A 443 GLN A 451 -1 N ILE A 450 O THR A 465 SHEET 3 B 8 PHE A 473 ARG A 479 -1 O ARG A 479 N ILE A 446 SHEET 4 B 8 ALA A 419 SER A 427 -1 N VAL A 421 O LEU A 476 SHEET 5 B 8 LEU A 402 ILE A 409 -1 N LEU A 406 O SER A 422 SHEET 6 B 8 LEU A 491 ALA A 493 -1 O ALA A 492 N PHE A 403 SHEET 7 B 8 SER A 435 TYR A 439 -1 N THR A 437 O ALA A 493 SHEET 8 B 8 GLN A 443 GLN A 451 -1 O CYS A 445 N LEU A 436 SHEET 1 C 2 SER A 429 ILE A 430 0 SHEET 2 C 2 ALA A 468 ILE A 469 -1 O ALA A 468 N ILE A 430 SHEET 1 D 2 HIS A 501 SER A 502 0 SHEET 2 D 2 PRO A 579 LEU A 580 -1 O LEU A 580 N HIS A 501 SHEET 1 E 7 CYS A 505 THR A 512 0 SHEET 2 E 7 ARG A 564 LEU A 571 -1 O ALA A 565 N LEU A 510 SHEET 3 E 7 LYS A 532 PHE A 544 -1 N LYS A 539 O GLU A 568 SHEET 4 E 7 PRO A 524 ILE A 529 -1 N LEU A 527 O GLN A 534 SHEET 5 E 7 ARG A 591 LYS A 596 -1 O ARG A 595 N ILE A 526 SHEET 6 E 7 ARG A 599 ILE A 609 -1 O ALA A 602 N LEU A 594 SHEET 7 E 7 CYS A 505 THR A 512 -1 N THR A 511 O ALA A 603 SHEET 1 F 6 CYS B 236 SER B 241 0 SHEET 2 F 6 ASN B 246 ASP B 251 -1 O ASP B 251 N CYS B 236 SHEET 3 F 6 HIS B 167 GLY B 174 1 N PHE B 170 O VAL B 250 SHEET 4 F 6 MSE B 271 ASP B 277 1 O ILE B 273 N VAL B 171 SHEET 5 F 6 LEU B 308 ASN B 313 1 O ASN B 313 N VAL B 276 SHEET 6 F 6 ILE B 346 PRO B 350 1 O ASN B 347 N ILE B 310 SHEET 1 G 8 GLU B 464 THR B 465 0 SHEET 2 G 8 GLN B 443 GLN B 451 -1 N ILE B 450 O THR B 465 SHEET 3 G 8 PHE B 473 ARG B 479 -1 O ARG B 479 N ILE B 446 SHEET 4 G 8 ALA B 419 SER B 427 -1 N VAL B 421 O LEU B 476 SHEET 5 G 8 LEU B 402 ILE B 409 -1 N LEU B 406 O SER B 422 SHEET 6 G 8 LEU B 491 ALA B 493 -1 O ALA B 492 N PHE B 403 SHEET 7 G 8 SER B 435 TYR B 439 -1 N TYR B 439 O LEU B 491 SHEET 8 G 8 GLN B 443 GLN B 451 -1 O CYS B 445 N LEU B 436 SHEET 1 H 2 SER B 429 ILE B 430 0 SHEET 2 H 2 ALA B 468 ILE B 469 -1 O ALA B 468 N ILE B 430 SHEET 1 I 2 HIS B 501 SER B 502 0 SHEET 2 I 2 PRO B 579 LEU B 580 -1 O LEU B 580 N HIS B 501 SHEET 1 J 7 CYS B 505 THR B 512 0 SHEET 2 J 7 ARG B 564 LEU B 571 -1 O ILE B 569 N PHE B 506 SHEET 3 J 7 LYS B 532 PHE B 544 -1 N LYS B 539 O GLU B 568 SHEET 4 J 7 PRO B 524 ILE B 529 -1 N LEU B 527 O GLN B 534 SHEET 5 J 7 ARG B 591 LYS B 596 -1 O ARG B 595 N ILE B 526 SHEET 6 J 7 ARG B 599 ILE B 609 -1 O ALA B 602 N LEU B 594 SHEET 7 J 7 CYS B 505 THR B 512 -1 N THR B 511 O ALA B 603 LINK C LEU A 183 N MSE A 184 1555 1555 1.33 LINK C MSE A 184 N GLY A 185 1555 1555 1.33 LINK C ILE A 219 N MSE A 220 1555 1555 1.33 LINK C MSE A 220 N ASP A 221 1555 1555 1.33 LINK C ILE A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N GLY A 265 1555 1555 1.33 LINK C ASP A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N ALA A 272 1555 1555 1.32 LINK C HIS A 296 N MSE A 297 1555 1555 1.32 LINK C MSE A 297 N LEU A 298 1555 1555 1.33 LINK C ALA A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N ASN A 313 1555 1555 1.32 LINK C LYS A 314 N MSE A 315 1555 1555 1.33 LINK C MSE A 315 N ASP A 316 1555 1555 1.31 LINK C LEU A 377 N MSE A 378 1555 1555 1.32 LINK C MSE A 378 N SER A 379 1555 1555 1.32 LINK C ASP A 514 N MSE A 515 1555 1555 1.32 LINK C MSE A 515 N ASN A 516 1555 1555 1.33 LINK C LEU B 183 N MSE B 184 1555 1555 1.33 LINK C MSE B 184 N GLY B 185 1555 1555 1.33 LINK C ILE B 219 N MSE B 220 1555 1555 1.33 LINK C MSE B 220 N ASP B 221 1555 1555 1.33 LINK C ILE B 263 N MSE B 264 1555 1555 1.33 LINK C MSE B 264 N GLY B 265 1555 1555 1.33 LINK C ASP B 270 N MSE B 271 1555 1555 1.32 LINK C MSE B 271 N ALA B 272 1555 1555 1.33 LINK C HIS B 296 N MSE B 297 1555 1555 1.32 LINK C MSE B 297 N LEU B 298 1555 1555 1.33 LINK C ALA B 311 N MSE B 312 1555 1555 1.33 LINK C MSE B 312 N ASN B 313 1555 1555 1.32 LINK C LYS B 314 N MSE B 315 1555 1555 1.32 LINK C MSE B 315 N ASP B 316 1555 1555 1.32 LINK C LEU B 377 N MSE B 378 1555 1555 1.33 LINK C MSE B 378 N SER B 379 1555 1555 1.33 LINK C ASP B 514 N MSE B 515 1555 1555 1.33 LINK C MSE B 515 N ASN B 516 1555 1555 1.34 CISPEP 1 TYR A 439 PRO A 440 0 9.76 CISPEP 2 TYR B 439 PRO B 440 0 9.31 SITE 1 AC1 15 HIS A 175 VAL A 176 ASP A 177 ALA A 178 SITE 2 AC1 15 GLY A 179 LYS A 180 SER A 181 THR A 182 SITE 3 AC1 15 ASN A 313 LYS A 314 ASP A 316 ASN A 317 SITE 4 AC1 15 SER A 352 GLY A 353 PHE A 354 SITE 1 AC2 15 HIS B 175 VAL B 176 ASP B 177 ALA B 178 SITE 2 AC2 15 GLY B 179 LYS B 180 SER B 181 THR B 182 SITE 3 AC2 15 ASN B 313 LYS B 314 ASP B 316 ASN B 317 SITE 4 AC2 15 SER B 352 GLY B 353 PHE B 354 CRYST1 109.964 109.964 188.199 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009094 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005314 0.00000