HEADER TRANSFERASE 04-OCT-10 3P3A TITLE CRYSTAL STRUCTURE OF A PUTATIVE THIOSULFATE SULFURTRANSFERASE FROM TITLE 2 MYCOBACTERIUM THERMORESISTIBLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOSULFATE SULFURTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.8.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM THERMORESISTIBILE; SOURCE 3 ORGANISM_TAXID: 1797; SOURCE 4 STRAIN: ATCC 19527 / NCTC 10409; SOURCE 5 GENE: NODE_3859_LENGTH_3444_COV_7.617015_22; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421 KEYWDS SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 2 TUBERCULOSIS, PARATUBERCULOSIS, THERMOSTABLE, RHODANESE, THIOSULFATE KEYWDS 3 CYANIDE TRANSSULFURASE, THIOSULFATE THIOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 06-SEP-23 3P3A 1 SEQADV REVDAT 3 22-APR-15 3P3A 1 REMARK REVDAT 2 27-JUN-12 3P3A 1 JRNL VERSN REVDAT 1 13-OCT-10 3P3A 0 JRNL AUTH T.E.EDWARDS,R.LIAO,I.PHAN,P.J.MYLER,C.GRUNDNER JRNL TITL MYCOBACTERIUM THERMORESISTIBILE AS A SOURCE OF THERMOSTABLE JRNL TITL 2 ORTHOLOGS OF MYCOBACTERIUM TUBERCULOSIS PROTEINS. JRNL REF PROTEIN SCI. V. 21 1093 2012 JRNL REFN ISSN 0961-8368 JRNL PMID 22544630 JRNL DOI 10.1002/PRO.2084 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.BAUGH,I.PHAN,D.W.BEGLEY,M.C.CLIFTON,B.ARMOUR,D.M.DRANOW, REMARK 1 AUTH 2 B.M.TAYLOR,M.M.MURUTHI,J.ABENDROTH,J.W.FAIRMAN,D.FOX, REMARK 1 AUTH 3 S.H.DIETERICH,B.L.STAKER,A.S.GARDBERG,R.CHOI,S.N.HEWITT, REMARK 1 AUTH 4 A.J.NAPULI,J.MYERS,L.K.BARRETT,Y.ZHANG,M.FERRELL,E.MUNDT, REMARK 1 AUTH 5 K.THOMPKINS,N.TRAN,S.LYONS-ABBOTT,A.ABRAMOV,A.SEKAR, REMARK 1 AUTH 6 D.SERBZHINSKIY,D.LORIMER,G.W.BUCHKO,R.STACY,L.J.STEWART, REMARK 1 AUTH 7 T.E.EDWARDS,W.C.VAN VOORHIS,P.J.MYLER REMARK 1 TITL INCREASING THE STRUCTURAL COVERAGE OF TUBERCULOSIS DRUG REMARK 1 TITL 2 TARGETS. REMARK 1 REF TUBERCULOSIS (EDINB) V. 95 142 2015 REMARK 1 REFN ISSN 1472-9792 REMARK 1 PMID 25613812 REMARK 1 DOI 10.1016/J.TUBE.2014.12.003 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 40509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2831 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4531 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 441 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.26000 REMARK 3 B22 (A**2) : 2.72000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.177 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4704 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6448 ; 1.460 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 583 ; 5.578 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 228 ;30.995 ;23.026 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 692 ;14.354 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;16.315 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 689 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3730 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2881 ; 0.718 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4665 ; 1.303 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1823 ; 1.900 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1776 ; 3.137 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 61 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4698 51.4494 -2.3317 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0637 REMARK 3 T33: 0.0910 T12: 0.0269 REMARK 3 T13: 0.0150 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.7078 L22: 0.1336 REMARK 3 L33: 2.0064 L12: -0.2373 REMARK 3 L13: -0.7422 L23: 0.0087 REMARK 3 S TENSOR REMARK 3 S11: 0.0767 S12: 0.0140 S13: 0.0967 REMARK 3 S21: -0.0127 S22: 0.0313 S23: -0.0247 REMARK 3 S31: -0.0588 S32: -0.0648 S33: -0.1079 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 62 A 165 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2864 41.2097 4.2166 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.0904 REMARK 3 T33: 0.0807 T12: 0.0039 REMARK 3 T13: 0.0182 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.8104 L22: 0.4303 REMARK 3 L33: 0.1212 L12: -0.3996 REMARK 3 L13: 0.0538 L23: -0.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: -0.1030 S13: -0.0266 REMARK 3 S21: -0.0338 S22: 0.0244 S23: -0.0192 REMARK 3 S31: -0.0204 S32: -0.0298 S33: -0.0692 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 166 A 261 REMARK 3 ORIGIN FOR THE GROUP (A): 61.8990 42.8045 -1.6704 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.0900 REMARK 3 T33: 0.0823 T12: -0.0065 REMARK 3 T13: -0.0093 T23: 0.0379 REMARK 3 L TENSOR REMARK 3 L11: 0.6585 L22: 0.6356 REMARK 3 L33: 0.8583 L12: -0.5683 REMARK 3 L13: 0.5221 L23: -0.6950 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: 0.0273 S13: 0.0233 REMARK 3 S21: 0.0323 S22: -0.0541 S23: -0.0291 REMARK 3 S31: -0.0523 S32: 0.0959 S33: 0.0840 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 262 A 296 REMARK 3 ORIGIN FOR THE GROUP (A): 65.8407 34.4482 2.7342 REMARK 3 T TENSOR REMARK 3 T11: 0.0598 T22: 0.1034 REMARK 3 T33: 0.0843 T12: 0.0161 REMARK 3 T13: 0.0073 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 0.2183 L22: 0.7389 REMARK 3 L33: 0.8649 L12: -0.2998 REMARK 3 L13: 0.3401 L23: -0.6352 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.0324 S13: -0.0231 REMARK 3 S21: -0.0468 S22: -0.1245 S23: 0.0266 REMARK 3 S31: 0.0820 S32: 0.0742 S33: 0.1057 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 63 REMARK 3 ORIGIN FOR THE GROUP (A): 84.8634 28.6285 41.1623 REMARK 3 T TENSOR REMARK 3 T11: 0.0628 T22: 0.0654 REMARK 3 T33: 0.0571 T12: 0.0196 REMARK 3 T13: -0.0092 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.6595 L22: 0.5547 REMARK 3 L33: 1.3456 L12: 0.3913 REMARK 3 L13: 0.0285 L23: -0.3825 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: -0.0487 S13: 0.0735 REMARK 3 S21: -0.0258 S22: 0.0109 S23: 0.0417 REMARK 3 S31: 0.0416 S32: 0.0445 S33: -0.0263 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 64 B 143 REMARK 3 ORIGIN FOR THE GROUP (A): 84.1715 29.6196 32.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.0728 REMARK 3 T33: 0.0798 T12: 0.0131 REMARK 3 T13: -0.0016 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.5347 L22: 0.0589 REMARK 3 L33: 1.0138 L12: -0.0606 REMARK 3 L13: 0.2050 L23: 0.0871 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: 0.0916 S13: 0.0614 REMARK 3 S21: 0.0518 S22: 0.0160 S23: 0.0182 REMARK 3 S31: 0.0146 S32: 0.0331 S33: 0.0215 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 144 B 216 REMARK 3 ORIGIN FOR THE GROUP (A): 66.4393 23.9446 26.5780 REMARK 3 T TENSOR REMARK 3 T11: 0.0292 T22: 0.0990 REMARK 3 T33: 0.0738 T12: -0.0210 REMARK 3 T13: 0.0037 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 3.7497 L22: 0.0679 REMARK 3 L33: 0.7615 L12: -0.4589 REMARK 3 L13: 0.8201 L23: -0.1545 REMARK 3 S TENSOR REMARK 3 S11: 0.1463 S12: -0.2580 S13: -0.0256 REMARK 3 S21: -0.0341 S22: 0.0180 S23: 0.0014 REMARK 3 S31: 0.1012 S32: -0.1539 S33: -0.1643 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 217 B 296 REMARK 3 ORIGIN FOR THE GROUP (A): 64.0131 21.9979 33.0811 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.1790 REMARK 3 T33: 0.0771 T12: -0.0143 REMARK 3 T13: -0.0102 T23: 0.0510 REMARK 3 L TENSOR REMARK 3 L11: 1.5093 L22: 0.0232 REMARK 3 L33: 0.9805 L12: -0.1601 REMARK 3 L13: 1.2048 L23: -0.1280 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: -0.2832 S13: -0.0406 REMARK 3 S21: -0.0268 S22: 0.0074 S23: 0.0011 REMARK 3 S31: 0.0830 S32: -0.2535 S33: -0.0843 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3P3A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061901. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40671 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 3HZU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 48.2 MG/ML MYTHA.01241.A.A1 PEAK2 REMARK 280 PS00652 AGAINST EMERALD BIOSYSTEMS WIZARD III SCREEN CONDITION REMARK 280 13 B1 8% PEG 4000, 0.1 M NAOAC PH 4.6, WITH 20% ETHYLENE GLYCOL REMARK 280 AS CRYO-PROTECTANT, CRYSTAL TRACKING ID 216651B1, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.11000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.41000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.68500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.41000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.11000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.68500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 HIS A 190 REMARK 465 MET A 191 REMARK 465 PRO A 192 REMARK 465 ASP A 193 REMARK 465 TYR A 194 REMARK 465 GLY A 297 REMARK 465 THR A 298 REMARK 465 SER A 299 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 SER B 3 REMARK 465 THR B 189 REMARK 465 HIS B 190 REMARK 465 MET B 191 REMARK 465 PRO B 192 REMARK 465 ASP B 193 REMARK 465 TYR B 194 REMARK 465 PRO B 195 REMARK 465 GLY B 297 REMARK 465 THR B 298 REMARK 465 SER B 299 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 PRO A 195 CG CD REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 ARG B 144 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 188 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 196 CG CD OE1 OE2 REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 ASP B 239 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 207 -9.14 83.52 REMARK 500 CYS A 246 -133.63 -144.17 REMARK 500 CYS A 246 -127.61 -148.51 REMARK 500 SER A 274 -161.37 61.00 REMARK 500 ARG B 144 133.96 -36.19 REMARK 500 THR B 207 -16.57 84.74 REMARK 500 CYS B 246 -126.46 -144.26 REMARK 500 CYS B 246 -129.13 -142.16 REMARK 500 SER B 274 -158.21 62.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HZU RELATED DB: PDB REMARK 900 SAME PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 RELATED ID: MYTHA.01241.A RELATED DB: TARGETDB DBREF 3P3A A 1 299 PDB 3P3A 3P3A 1 299 DBREF 3P3A B 1 299 PDB 3P3A 3P3A 1 299 SEQADV 3P3A MET A -20 PDB 3P3A EXPRESSION TAG SEQADV 3P3A ALA A -19 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -18 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -17 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -16 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -15 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -14 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS A -13 PDB 3P3A EXPRESSION TAG SEQADV 3P3A MET A -12 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY A -11 PDB 3P3A EXPRESSION TAG SEQADV 3P3A THR A -10 PDB 3P3A EXPRESSION TAG SEQADV 3P3A LEU A -9 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLU A -8 PDB 3P3A EXPRESSION TAG SEQADV 3P3A ALA A -7 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLN A -6 PDB 3P3A EXPRESSION TAG SEQADV 3P3A THR A -5 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLN A -4 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY A -3 PDB 3P3A EXPRESSION TAG SEQADV 3P3A PRO A -2 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY A -1 PDB 3P3A EXPRESSION TAG SEQADV 3P3A SER A 0 PDB 3P3A EXPRESSION TAG SEQADV 3P3A MET B -20 PDB 3P3A EXPRESSION TAG SEQADV 3P3A ALA B -19 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -18 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -17 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -16 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -15 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -14 PDB 3P3A EXPRESSION TAG SEQADV 3P3A HIS B -13 PDB 3P3A EXPRESSION TAG SEQADV 3P3A MET B -12 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY B -11 PDB 3P3A EXPRESSION TAG SEQADV 3P3A THR B -10 PDB 3P3A EXPRESSION TAG SEQADV 3P3A LEU B -9 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLU B -8 PDB 3P3A EXPRESSION TAG SEQADV 3P3A ALA B -7 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLN B -6 PDB 3P3A EXPRESSION TAG SEQADV 3P3A THR B -5 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLN B -4 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY B -3 PDB 3P3A EXPRESSION TAG SEQADV 3P3A PRO B -2 PDB 3P3A EXPRESSION TAG SEQADV 3P3A GLY B -1 PDB 3P3A EXPRESSION TAG SEQADV 3P3A SER B 0 PDB 3P3A EXPRESSION TAG SEQRES 1 A 320 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 320 ALA GLN THR GLN GLY PRO GLY SER MET VAL SER LEU PRO SEQRES 3 A 320 ALA ASP PRO SER PRO GLU LEU LYS GLN TYR ALA HIS PRO SEQRES 4 A 320 GLU ARG LEU VAL THR ALA ASP TRP LEU ALA SER ASN LEU SEQRES 5 A 320 GLY ARG PRO GLY LEU VAL ILE VAL GLU SER ASP GLU ASP SEQRES 6 A 320 VAL LEU LEU TYR ASP THR GLY HIS ILE PRO GLY ALA VAL SEQRES 7 A 320 LYS ILE ASP TRP HIS THR ASP LEU ASN ASP PRO ALA VAL SEQRES 8 A 320 ARG ASP TYR ILE ASN GLY GLU GLN PHE ALA ALA LEU MET SEQRES 9 A 320 ASP ARG LYS GLY VAL THR ARG ASP ASP THR VAL VAL ILE SEQRES 10 A 320 TYR GLY ASP LYS SER ASN TRP TRP ALA ALA TYR ALA MET SEQRES 11 A 320 TRP VAL PHE HIS LEU PHE GLY HIS PRO ASP VAL ARG LEU SEQRES 12 A 320 LEU ASP GLY GLY ARG ASP LEU TRP VAL SER THR GLY ARG SEQRES 13 A 320 ASP THR THR LEU GLU VAL PRO THR ARG GLN THR SER GLY SEQRES 14 A 320 TYR PRO VAL VAL GLU ARG ASN ASP ALA PRO ILE ARG ALA SEQRES 15 A 320 PHE LYS ASP ASP VAL LEU ARG VAL LEU GLY LYS GLU PRO SEQRES 16 A 320 LEU ILE ASP VAL ARG SER PRO GLN GLU TYR THR GLY GLU SEQRES 17 A 320 ARG THR HIS MET PRO ASP TYR PRO GLU GLU GLY ALA LEU SEQRES 18 A 320 ARG GLY GLY HIS ILE PRO THR ALA VAL SER VAL PRO TRP SEQRES 19 A 320 SER LYS ALA ALA TYR ASP ASP GLY ARG PHE ARG ALA ARG SEQRES 20 A 320 ALA GLU LEU GLU GLU ILE TYR GLY PHE VAL LYS PRO ASP SEQRES 21 A 320 ASP LYS PRO ILE VAL TYR CYS ARG ILE GLY GLU ARG SER SEQRES 22 A 320 SER HIS THR TRP PHE VAL LEU THR TYR LEU LEU GLY HIS SEQRES 23 A 320 PRO ASN VAL ARG ASN TYR ASP GLY SER TRP THR GLU TRP SEQRES 24 A 320 GLY ASN ALA VAL ARG VAL PRO ILE VAL VAL GLY PRO GLU SEQRES 25 A 320 PRO GLY GLU ALA PRO GLY THR SER SEQRES 1 B 320 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 320 ALA GLN THR GLN GLY PRO GLY SER MET VAL SER LEU PRO SEQRES 3 B 320 ALA ASP PRO SER PRO GLU LEU LYS GLN TYR ALA HIS PRO SEQRES 4 B 320 GLU ARG LEU VAL THR ALA ASP TRP LEU ALA SER ASN LEU SEQRES 5 B 320 GLY ARG PRO GLY LEU VAL ILE VAL GLU SER ASP GLU ASP SEQRES 6 B 320 VAL LEU LEU TYR ASP THR GLY HIS ILE PRO GLY ALA VAL SEQRES 7 B 320 LYS ILE ASP TRP HIS THR ASP LEU ASN ASP PRO ALA VAL SEQRES 8 B 320 ARG ASP TYR ILE ASN GLY GLU GLN PHE ALA ALA LEU MET SEQRES 9 B 320 ASP ARG LYS GLY VAL THR ARG ASP ASP THR VAL VAL ILE SEQRES 10 B 320 TYR GLY ASP LYS SER ASN TRP TRP ALA ALA TYR ALA MET SEQRES 11 B 320 TRP VAL PHE HIS LEU PHE GLY HIS PRO ASP VAL ARG LEU SEQRES 12 B 320 LEU ASP GLY GLY ARG ASP LEU TRP VAL SER THR GLY ARG SEQRES 13 B 320 ASP THR THR LEU GLU VAL PRO THR ARG GLN THR SER GLY SEQRES 14 B 320 TYR PRO VAL VAL GLU ARG ASN ASP ALA PRO ILE ARG ALA SEQRES 15 B 320 PHE LYS ASP ASP VAL LEU ARG VAL LEU GLY LYS GLU PRO SEQRES 16 B 320 LEU ILE ASP VAL ARG SER PRO GLN GLU TYR THR GLY GLU SEQRES 17 B 320 ARG THR HIS MET PRO ASP TYR PRO GLU GLU GLY ALA LEU SEQRES 18 B 320 ARG GLY GLY HIS ILE PRO THR ALA VAL SER VAL PRO TRP SEQRES 19 B 320 SER LYS ALA ALA TYR ASP ASP GLY ARG PHE ARG ALA ARG SEQRES 20 B 320 ALA GLU LEU GLU GLU ILE TYR GLY PHE VAL LYS PRO ASP SEQRES 21 B 320 ASP LYS PRO ILE VAL TYR CYS ARG ILE GLY GLU ARG SER SEQRES 22 B 320 SER HIS THR TRP PHE VAL LEU THR TYR LEU LEU GLY HIS SEQRES 23 B 320 PRO ASN VAL ARG ASN TYR ASP GLY SER TRP THR GLU TRP SEQRES 24 B 320 GLY ASN ALA VAL ARG VAL PRO ILE VAL VAL GLY PRO GLU SEQRES 25 B 320 PRO GLY GLU ALA PRO GLY THR SER FORMUL 3 HOH *441(H2 O) HELIX 1 1 SER A 9 LYS A 13 5 5 HELIX 2 2 HIS A 17 GLU A 19 5 3 HELIX 3 3 THR A 23 LEU A 31 1 9 HELIX 4 4 LEU A 47 GLY A 51 5 5 HELIX 5 5 ASP A 60 ASN A 66 1 7 HELIX 6 6 ASN A 75 GLY A 87 1 13 HELIX 7 7 GLY A 98 PHE A 115 1 18 HELIX 8 8 GLY A 125 THR A 133 1 9 HELIX 9 9 PHE A 162 LEU A 170 1 9 HELIX 10 10 SER A 180 THR A 185 1 6 HELIX 11 11 PRO A 212 ALA A 217 5 6 HELIX 12 12 ALA A 225 GLY A 234 1 10 HELIX 13 13 ILE A 248 ARG A 251 5 4 HELIX 14 14 SER A 252 LEU A 262 1 11 HELIX 15 15 GLY A 273 GLY A 279 1 7 HELIX 16 16 SER B 9 LYS B 13 5 5 HELIX 17 17 HIS B 17 GLU B 19 5 3 HELIX 18 18 THR B 23 LEU B 31 1 9 HELIX 19 19 LEU B 46 GLY B 51 5 6 HELIX 20 20 ASP B 60 ASN B 66 1 7 HELIX 21 21 ASN B 75 GLY B 87 1 13 HELIX 22 22 ASP B 99 SER B 101 5 3 HELIX 23 23 ASN B 102 PHE B 115 1 14 HELIX 24 24 GLY B 125 THR B 133 1 9 HELIX 25 25 PHE B 162 LEU B 170 1 9 HELIX 26 26 SER B 180 GLY B 186 1 7 HELIX 27 27 PRO B 212 ALA B 217 5 6 HELIX 28 28 ALA B 225 TYR B 233 1 9 HELIX 29 29 GLY B 249 LEU B 262 1 14 HELIX 30 30 GLY B 273 GLY B 279 1 7 SHEET 1 A 5 LEU A 21 VAL A 22 0 SHEET 2 A 5 VAL A 120 LEU A 123 1 O LEU A 122 N VAL A 22 SHEET 3 A 5 THR A 93 TYR A 97 1 N ILE A 96 O ARG A 121 SHEET 4 A 5 LEU A 36 GLU A 40 1 N VAL A 37 O THR A 93 SHEET 5 A 5 VAL A 57 LYS A 58 1 O VAL A 57 N GLU A 40 SHEET 1 B 4 VAL A 209 SER A 210 0 SHEET 2 B 4 LEU A 175 ASP A 177 1 N ASP A 177 O VAL A 209 SHEET 3 B 4 ILE A 243 TYR A 245 1 O ILE A 243 N ILE A 176 SHEET 4 B 4 ARG A 269 ASN A 270 1 O ARG A 269 N VAL A 244 SHEET 1 C 5 LEU B 21 VAL B 22 0 SHEET 2 C 5 VAL B 120 LEU B 123 1 O LEU B 122 N VAL B 22 SHEET 3 C 5 THR B 93 TYR B 97 1 N ILE B 96 O ARG B 121 SHEET 4 C 5 LEU B 36 GLU B 40 1 N VAL B 39 O VAL B 95 SHEET 5 C 5 VAL B 57 LYS B 58 1 O VAL B 57 N GLU B 40 SHEET 1 D 4 VAL B 209 SER B 210 0 SHEET 2 D 4 LEU B 175 ASP B 177 1 N LEU B 175 O VAL B 209 SHEET 3 D 4 ILE B 243 TYR B 245 1 O ILE B 243 N ILE B 176 SHEET 4 D 4 ARG B 269 ASN B 270 1 O ARG B 269 N VAL B 244 CRYST1 56.220 83.370 146.820 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017787 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006811 0.00000