data_3P5V # _entry.id 3P5V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3P5V RCSB RCSB061994 WWPDB D_1000061994 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1AEC . unspecified PDB 2ACT . unspecified PDB 3P5U . unspecified PDB 3P5W . unspecified PDB 3P5X . unspecified # _pdbx_database_status.entry_id 3P5V _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-10-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Manickam, Y.' 1 'Nirmal, N.' 2 'Suzuki, A.' 3 'Sugiyama, Y.' 4 'Yamane, T.' 5 'Devadasan, V.' 6 'Sharma, A.' 7 # _citation.id primary _citation.title ;Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 66 _citation.page_first 1323 _citation.page_last 1333 _citation.year 2010 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21123873 _citation.pdbx_database_id_DOI 10.1107/S0907444910040394 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yogavel, M.' 1 primary 'Nithya, N.' 2 primary 'Suzuki, A.' 3 primary 'Sugiyama, Y.' 4 primary 'Yamane, T.' 5 primary 'Velmurugan, D.' 6 primary 'Sharma, A.' 7 # _cell.length_a 47.269 _cell.length_b 55.812 _cell.length_c 70.225 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3P5V _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3P5V _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Actinidin 23993.309 1 3.4.22.14 ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 9 ? ? ? ? 3 water nat water 18.015 216 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;LPDYVDWRSSGAVVDIKDQGQCGS(CSO)WAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQF IINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPC GTAVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVKYYN ; _entity_poly.pdbx_seq_one_letter_code_can ;LPDYVDWRSSGAVVDIKDQGQCGSCWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV DHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVKYYN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 PRO n 1 3 ASP n 1 4 TYR n 1 5 VAL n 1 6 ASP n 1 7 TRP n 1 8 ARG n 1 9 SER n 1 10 SER n 1 11 GLY n 1 12 ALA n 1 13 VAL n 1 14 VAL n 1 15 ASP n 1 16 ILE n 1 17 LYS n 1 18 ASP n 1 19 GLN n 1 20 GLY n 1 21 GLN n 1 22 CYS n 1 23 GLY n 1 24 SER n 1 25 CSO n 1 26 TRP n 1 27 ALA n 1 28 PHE n 1 29 SER n 1 30 THR n 1 31 ILE n 1 32 ALA n 1 33 ALA n 1 34 VAL n 1 35 GLU n 1 36 GLY n 1 37 ILE n 1 38 ASN n 1 39 LYS n 1 40 ILE n 1 41 ALA n 1 42 THR n 1 43 GLY n 1 44 ASP n 1 45 LEU n 1 46 ILE n 1 47 SER n 1 48 LEU n 1 49 SER n 1 50 GLU n 1 51 GLN n 1 52 GLU n 1 53 LEU n 1 54 VAL n 1 55 ASP n 1 56 CYS n 1 57 GLY n 1 58 ARG n 1 59 THR n 1 60 GLN n 1 61 ASN n 1 62 THR n 1 63 ARG n 1 64 GLY n 1 65 CYS n 1 66 ASP n 1 67 GLY n 1 68 GLY n 1 69 PHE n 1 70 MET n 1 71 THR n 1 72 ASP n 1 73 GLY n 1 74 PHE n 1 75 GLN n 1 76 PHE n 1 77 ILE n 1 78 ILE n 1 79 ASN n 1 80 ASN n 1 81 GLY n 1 82 GLY n 1 83 ILE n 1 84 ASN n 1 85 THR n 1 86 GLU n 1 87 ALA n 1 88 ASN n 1 89 TYR n 1 90 PRO n 1 91 TYR n 1 92 THR n 1 93 ALA n 1 94 GLU n 1 95 GLU n 1 96 GLY n 1 97 GLN n 1 98 CYS n 1 99 ASN n 1 100 LEU n 1 101 ASP n 1 102 LEU n 1 103 GLN n 1 104 GLN n 1 105 GLU n 1 106 LYS n 1 107 TYR n 1 108 VAL n 1 109 SER n 1 110 ILE n 1 111 ASP n 1 112 THR n 1 113 TYR n 1 114 GLU n 1 115 ASN n 1 116 VAL n 1 117 PRO n 1 118 TYR n 1 119 ASN n 1 120 ASN n 1 121 GLU n 1 122 TRP n 1 123 ALA n 1 124 LEU n 1 125 GLN n 1 126 THR n 1 127 ALA n 1 128 VAL n 1 129 ALA n 1 130 TYR n 1 131 GLN n 1 132 PRO n 1 133 VAL n 1 134 SER n 1 135 VAL n 1 136 ALA n 1 137 LEU n 1 138 GLU n 1 139 ALA n 1 140 ALA n 1 141 GLY n 1 142 TYR n 1 143 ASN n 1 144 PHE n 1 145 GLN n 1 146 HIS n 1 147 TYR n 1 148 SER n 1 149 SER n 1 150 GLY n 1 151 ILE n 1 152 PHE n 1 153 THR n 1 154 GLY n 1 155 PRO n 1 156 CYS n 1 157 GLY n 1 158 THR n 1 159 ALA n 1 160 VAL n 1 161 ASP n 1 162 HIS n 1 163 ALA n 1 164 VAL n 1 165 THR n 1 166 ILE n 1 167 VAL n 1 168 GLY n 1 169 TYR n 1 170 GLY n 1 171 THR n 1 172 GLU n 1 173 GLY n 1 174 GLY n 1 175 ILE n 1 176 ASP n 1 177 TYR n 1 178 TRP n 1 179 ILE n 1 180 VAL n 1 181 LYS n 1 182 ASN n 1 183 SER n 1 184 TRP n 1 185 GLY n 1 186 THR n 1 187 THR n 1 188 TRP n 1 189 GLY n 1 190 GLU n 1 191 GLU n 1 192 GLY n 1 193 TYR n 1 194 MET n 1 195 ARG n 1 196 ILE n 1 197 GLN n 1 198 ARG n 1 199 ASN n 1 200 VAL n 1 201 GLY n 1 202 GLY n 1 203 VAL n 1 204 GLY n 1 205 GLN n 1 206 CYS n 1 207 GLY n 1 208 ILE n 1 209 ALA n 1 210 LYS n 1 211 LYS n 1 212 ALA n 1 213 SER n 1 214 TYR n 1 215 PRO n 1 216 VAL n 1 217 LYS n 1 218 TYR n 1 219 TYR n 1 220 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name Sarusashi _entity_src_nat.pdbx_organism_scientific 'Actinidia arguta' _entity_src_nat.pdbx_ncbi_taxonomy_id 64478 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3P5V _struct_ref.pdbx_db_accession 3P5V _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3P5V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3P5V _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3P5V _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 36.28 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6 _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '30% PEG 400, 0.1M sodium acetate, 30mM Cadmium chloride , pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 288K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS VII' _diffrn_detector.pdbx_collection_date 2008-09-15 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator Mirrors _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E DW' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3P5V _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 90 _reflns.number_all ? _reflns.number_obs 15226 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 41.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.275 _reflns_shell.meanI_over_sigI_obs 6.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 13 _reflns_shell.number_unique_all 1494 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3P5V _refine.ls_d_res_high 1.9 _refine.ls_d_res_low 19.64 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8 _refine.ls_number_reflns_obs 15163 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.169 _refine.ls_R_factor_R_work 0.1642 _refine.ls_wR_factor_R_work 0.1732 _refine.ls_R_factor_R_free 0.2129 _refine.ls_wR_factor_R_free 0.2161 _refine.ls_percent_reflns_R_free 10.1000 _refine.ls_number_reflns_R_free 1528 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.6068 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.5900 _refine.aniso_B[2][2] -0.8500 _refine.aniso_B[3][3] -0.7400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9360 _refine.overall_SU_R_Cruickshank_DPI 0.1870 _refine.overall_SU_R_free 0.1586 _refine.pdbx_overall_ESU_R_Free 0.1590 _refine.overall_SU_ML 0.0970 _refine.overall_SU_B 3.2340 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8682 _refine.B_iso_max 63.210 _refine.B_iso_min 2.000 _refine.occupancy_max 1.000 _refine.occupancy_min 0.250 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1689 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 216 _refine_hist.number_atoms_total 1914 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 19.64 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1763 0.007 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2408 0.983 1.923 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 228 5.277 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 88 35.796 25.568 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 263 13.041 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 16.932 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 253 0.068 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1395 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 842 0.204 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1225 0.302 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 194 0.115 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 9 0.336 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 48 0.185 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 20 0.117 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1129 0.439 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1753 0.765 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 762 1.142 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 649 1.689 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 963 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1850 _refine_ls_shell.R_factor_R_free 0.2610 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 132 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1095 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3P5V _struct.title 'Actinidin from Actinidia arguta planch (Sarusashi)' _struct.pdbx_descriptor 'Actinidin (E.C.3.4.22.14)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3P5V _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'SAD, Cysteine proteinases, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 8 ? GLY A 11 ? ARG A 8 GLY A 11 5 ? 4 HELX_P HELX_P2 2 SER A 24 ? GLY A 43 ? SER A 24 GLY A 43 1 ? 20 HELX_P HELX_P3 3 SER A 49 ? GLY A 57 ? SER A 49 GLY A 57 1 ? 9 HELX_P HELX_P4 4 ARG A 63 ? GLY A 67 ? ARG A 63 GLY A 67 5 ? 5 HELX_P HELX_P5 5 PHE A 69 ? GLY A 81 ? PHE A 69 GLY A 81 1 ? 13 HELX_P HELX_P6 6 ASN A 99 ? GLN A 104 ? ASN A 99 GLN A 104 1 ? 6 HELX_P HELX_P7 7 ASN A 120 ? ALA A 129 ? ASN A 120 ALA A 129 1 ? 10 HELX_P HELX_P8 8 GLY A 141 ? HIS A 146 ? GLY A 141 HIS A 146 1 ? 6 HELX_P HELX_P9 9 GLY A 204 ? ILE A 208 ? GLY A 204 ILE A 208 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 22 A CYS 65 1_555 ? ? ? ? ? ? ? 2.036 ? disulf2 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 56 A CYS 98 1_555 ? ? ? ? ? ? ? 2.044 ? disulf3 disulf ? ? A CYS 156 SG ? ? ? 1_555 A CYS 206 SG ? ? A CYS 156 A CYS 206 1_555 ? ? ? ? ? ? ? 2.045 ? covale1 covale ? ? A SER 24 C ? ? ? 1_555 A CSO 25 N ? ? A SER 24 A CSO 25 1_555 ? ? ? ? ? ? ? 1.258 ? covale2 covale ? ? A CSO 25 C ? ? ? 1_555 A TRP 26 N ? ? A CSO 25 A TRP 26 1_555 ? ? ? ? ? ? ? 1.434 ? metalc1 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 222 A HOH 315 1_555 ? ? ? ? ? ? ? 2.048 ? metalc2 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 222 A HOH 314 1_555 ? ? ? ? ? ? ? 2.065 ? metalc3 metalc ? ? D CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 223 A HOH 327 1_555 ? ? ? ? ? ? ? 2.066 ? metalc4 metalc ? ? H CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 227 A HOH 307 1_555 ? ? ? ? ? ? ? 2.105 ? metalc5 metalc ? ? H CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 227 A HOH 309 1_555 ? ? ? ? ? ? ? 2.166 ? metalc6 metalc ? ? D CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 223 A HOH 326 1_555 ? ? ? ? ? ? ? 2.178 ? metalc7 metalc ? ? A ASP 176 OD2 ? ? ? 1_555 C CD . CD ? ? A ASP 176 A CD 222 1_555 ? ? ? ? ? ? ? 2.182 ? metalc8 metalc ? ? B CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 221 A HOH 241 1_555 ? ? ? ? ? ? ? 2.223 ? metalc9 metalc ? ? E CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 224 A HOH 303 1_555 ? ? ? ? ? ? ? 2.238 ? metalc10 metalc ? ? B CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 221 A HOH 400 1_555 ? ? ? ? ? ? ? 2.249 ? metalc11 metalc ? ? D CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 223 A HOH 401 1_555 ? ? ? ? ? ? ? 2.251 ? metalc12 metalc ? ? A ASP 111 OD2 ? ? ? 1_555 F CD . CD ? ? A ASP 111 A CD 225 1_555 ? ? ? ? ? ? ? 2.253 ? metalc13 metalc ? ? G CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 226 A HOH 329 1_555 ? ? ? ? ? ? ? 2.261 ? metalc14 metalc ? ? A HIS 162 ND1 ? ? ? 1_555 B CD . CD ? ? A HIS 162 A CD 221 1_555 ? ? ? ? ? ? ? 2.318 ? metalc15 metalc ? ? A ASP 111 OD1 ? ? ? 1_555 F CD . CD ? ? A ASP 111 A CD 225 1_555 ? ? ? ? ? ? ? 2.322 ? metalc16 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 222 A HOH 290 1_555 ? ? ? ? ? ? ? 2.328 ? metalc17 metalc ? ? A ASP 72 OD1 ? ? ? 1_555 G CD . CD ? ? A ASP 72 A CD 226 1_555 ? ? ? ? ? ? ? 2.334 ? metalc18 metalc ? ? H CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 227 A HOH 306 1_555 ? ? ? ? ? ? ? 2.360 ? metalc19 metalc ? ? A GLU 191 OE2 ? ? ? 1_555 D CD . CD ? ? A GLU 191 A CD 223 1_555 ? ? ? ? ? ? ? 2.369 ? metalc20 metalc ? ? A GLU 191 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 191 A CD 223 1_555 ? ? ? ? ? ? ? 2.416 ? metalc21 metalc ? ? H CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 227 A HOH 308 1_555 ? ? ? ? ? ? ? 2.456 ? metalc22 metalc ? ? E CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 224 A HOH 328 1_555 ? ? ? ? ? ? ? 2.498 ? metalc23 metalc ? ? J CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 229 A HOH 445 1_555 ? ? ? ? ? ? ? 2.508 ? metalc24 metalc ? ? D CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 223 A HOH 402 1_555 ? ? ? ? ? ? ? 2.510 ? metalc25 metalc ? ? F CD . CD ? ? ? 1_555 K HOH . O B ? A CD 225 A HOH 403 1_555 ? ? ? ? ? ? ? 2.545 ? metalc26 metalc ? ? G CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 226 A HOH 269 1_555 ? ? ? ? ? ? ? 2.571 ? metalc27 metalc ? ? F CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 225 A HOH 278 1_555 ? ? ? ? ? ? ? 2.604 ? metalc28 metalc ? ? A ASP 15 OD2 ? ? ? 1_555 I CD . CD ? ? A ASP 15 A CD 228 1_555 ? ? ? ? ? ? ? 2.609 ? metalc29 metalc ? ? A ASP 15 OD1 ? ? ? 1_555 I CD . CD ? ? A ASP 15 A CD 228 1_555 ? ? ? ? ? ? ? 2.699 ? metalc30 metalc ? ? H CD . CD ? ? ? 1_555 K HOH . O B ? A CD 227 A HOH 305 1_555 ? ? ? ? ? ? ? 2.700 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 154 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 154 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 155 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 155 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 A 2 HIS A 162 ? GLU A 172 ? HIS A 162 GLU A 172 A 3 VAL A 133 ? LEU A 137 ? VAL A 133 LEU A 137 B 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 B 2 HIS A 162 ? GLU A 172 ? HIS A 162 GLU A 172 B 3 ILE A 175 ? LYS A 181 ? ILE A 175 LYS A 181 B 4 TYR A 193 ? GLN A 197 ? TYR A 193 GLN A 197 B 5 ILE A 151 ? PHE A 152 ? ILE A 151 PHE A 152 C 1 THR A 112 ? ASN A 115 ? THR A 112 ASN A 115 C 2 SER A 213 ? VAL A 216 ? SER A 213 VAL A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169 A 2 3 O ILE A 166 ? O ILE A 166 N VAL A 133 ? N VAL A 133 B 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169 B 2 3 N THR A 165 ? N THR A 165 O LYS A 181 ? O LYS A 181 B 3 4 N VAL A 180 ? N VAL A 180 O MET A 194 ? O MET A 194 B 4 5 O ARG A 195 ? O ARG A 195 N PHE A 152 ? N PHE A 152 C 1 2 N THR A 112 ? N THR A 112 O VAL A 216 ? O VAL A 216 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 221' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 222' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 223' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 224' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 225' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CD A 226' AC7 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CD A 227' AC8 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CD A 228' AC9 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 229' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CSO A 25 ? CSO A 25 . ? 1_555 ? 2 AC1 5 HIS A 162 ? HIS A 162 . ? 1_555 ? 3 AC1 5 ASN A 220 ? ASN A 220 . ? 2_664 ? 4 AC1 5 HOH K . ? HOH A 241 . ? 1_555 ? 5 AC1 5 HOH K . ? HOH A 400 . ? 1_555 ? 6 AC2 5 GLU A 114 ? GLU A 114 . ? 4_566 ? 7 AC2 5 ASP A 176 ? ASP A 176 . ? 1_555 ? 8 AC2 5 HOH K . ? HOH A 290 . ? 1_555 ? 9 AC2 5 HOH K . ? HOH A 314 . ? 1_555 ? 10 AC2 5 HOH K . ? HOH A 315 . ? 1_555 ? 11 AC3 5 GLU A 191 ? GLU A 191 . ? 1_555 ? 12 AC3 5 HOH K . ? HOH A 326 . ? 1_555 ? 13 AC3 5 HOH K . ? HOH A 327 . ? 1_555 ? 14 AC3 5 HOH K . ? HOH A 401 . ? 1_555 ? 15 AC3 5 HOH K . ? HOH A 402 . ? 1_555 ? 16 AC4 5 ASP A 44 ? ASP A 44 . ? 1_555 ? 17 AC4 5 ASP A 101 ? ASP A 101 . ? 4_556 ? 18 AC4 5 CD J . ? CD A 229 . ? 1_555 ? 19 AC4 5 HOH K . ? HOH A 303 . ? 1_555 ? 20 AC4 5 HOH K . ? HOH A 328 . ? 1_555 ? 21 AC5 5 ASP A 111 ? ASP A 111 . ? 1_555 ? 22 AC5 5 HIS A 146 ? HIS A 146 . ? 2_665 ? 23 AC5 5 HOH K . ? HOH A 278 . ? 1_555 ? 24 AC5 5 HOH K . ? HOH A 302 . ? 2_665 ? 25 AC5 5 HOH K . ? HOH A 403 . ? 1_555 ? 26 AC6 4 ASP A 72 ? ASP A 72 . ? 1_555 ? 27 AC6 4 HOH K . ? HOH A 269 . ? 1_555 ? 28 AC6 4 HOH K . ? HOH A 329 . ? 1_555 ? 29 AC6 4 HOH K . ? HOH A 405 . ? 1_555 ? 30 AC7 6 THR A 186 ? THR A 186 . ? 1_555 ? 31 AC7 6 HOH K . ? HOH A 305 . ? 1_555 ? 32 AC7 6 HOH K . ? HOH A 306 . ? 1_555 ? 33 AC7 6 HOH K . ? HOH A 307 . ? 1_555 ? 34 AC7 6 HOH K . ? HOH A 308 . ? 1_555 ? 35 AC7 6 HOH K . ? HOH A 309 . ? 1_555 ? 36 AC8 2 ASP A 15 ? ASP A 15 . ? 1_555 ? 37 AC8 2 HOH K . ? HOH A 407 . ? 1_555 ? 38 AC9 5 ASP A 44 ? ASP A 44 . ? 1_555 ? 39 AC9 5 ASP A 101 ? ASP A 101 . ? 4_556 ? 40 AC9 5 CD E . ? CD A 224 . ? 1_555 ? 41 AC9 5 HOH K . ? HOH A 320 . ? 1_555 ? 42 AC9 5 HOH K . ? HOH A 445 . ? 1_555 ? # _atom_sites.entry_id 3P5V _atom_sites.fract_transf_matrix[1][1] 0.021156 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017917 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014240 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 CSO 25 25 25 CSO CSO A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 CYS 56 56 56 CYS CYS A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 CYS 65 65 65 CYS CYS A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 TRP 122 122 122 TRP TRP A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 GLN 131 131 131 GLN GLN A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 CYS 156 156 156 CYS CYS A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 TRP 178 178 178 TRP TRP A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 TRP 184 184 184 TRP TRP A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 MET 194 194 194 MET MET A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 ASN 199 199 199 ASN ASN A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 GLN 205 205 205 GLN GLN A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 LYS 210 210 210 LYS LYS A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 TYR 219 219 219 TYR TYR A . n A 1 220 ASN 220 220 220 ASN ASN A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 25 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 25 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details S-HYDROXYCYSTEINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? K HOH . ? A HOH 315 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 O ? K HOH . ? A HOH 314 ? 1_555 99.3 ? 2 O ? K HOH . ? A HOH 315 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 OD2 ? A ASP 176 ? A ASP 176 ? 1_555 101.2 ? 3 O ? K HOH . ? A HOH 314 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 OD2 ? A ASP 176 ? A ASP 176 ? 1_555 103.2 ? 4 O ? K HOH . ? A HOH 315 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 O ? K HOH . ? A HOH 290 ? 1_555 82.6 ? 5 O ? K HOH . ? A HOH 314 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 O ? K HOH . ? A HOH 290 ? 1_555 168.1 ? 6 OD2 ? A ASP 176 ? A ASP 176 ? 1_555 CD ? C CD . ? A CD 222 ? 1_555 O ? K HOH . ? A HOH 290 ? 1_555 87.9 ? 7 O ? K HOH . ? A HOH 327 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 326 ? 1_555 169.2 ? 8 O ? K HOH . ? A HOH 327 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 401 ? 1_555 89.8 ? 9 O ? K HOH . ? A HOH 326 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 401 ? 1_555 83.7 ? 10 O ? K HOH . ? A HOH 327 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE2 ? A GLU 191 ? A GLU 191 ? 1_555 87.7 ? 11 O ? K HOH . ? A HOH 326 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE2 ? A GLU 191 ? A GLU 191 ? 1_555 94.5 ? 12 O ? K HOH . ? A HOH 401 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE2 ? A GLU 191 ? A GLU 191 ? 1_555 154.9 ? 13 O ? K HOH . ? A HOH 327 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE1 ? A GLU 191 ? A GLU 191 ? 1_555 83.2 ? 14 O ? K HOH . ? A HOH 326 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE1 ? A GLU 191 ? A GLU 191 ? 1_555 89.5 ? 15 O ? K HOH . ? A HOH 401 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE1 ? A GLU 191 ? A GLU 191 ? 1_555 100.3 ? 16 OE2 ? A GLU 191 ? A GLU 191 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 OE1 ? A GLU 191 ? A GLU 191 ? 1_555 54.6 ? 17 O ? K HOH . ? A HOH 327 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 402 ? 1_555 92.0 ? 18 O ? K HOH . ? A HOH 326 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 402 ? 1_555 98.7 ? 19 O ? K HOH . ? A HOH 401 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 402 ? 1_555 118.3 ? 20 OE2 ? A GLU 191 ? A GLU 191 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 402 ? 1_555 86.7 ? 21 OE1 ? A GLU 191 ? A GLU 191 ? 1_555 CD ? D CD . ? A CD 223 ? 1_555 O ? K HOH . ? A HOH 402 ? 1_555 141.0 ? 22 O ? K HOH . ? A HOH 307 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 309 ? 1_555 138.5 ? 23 O ? K HOH . ? A HOH 307 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 306 ? 1_555 81.4 ? 24 O ? K HOH . ? A HOH 309 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 306 ? 1_555 83.9 ? 25 O ? K HOH . ? A HOH 307 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 308 ? 1_555 79.9 ? 26 O ? K HOH . ? A HOH 309 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 308 ? 1_555 102.3 ? 27 O ? K HOH . ? A HOH 306 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O ? K HOH . ? A HOH 308 ? 1_555 157.6 ? 28 O ? K HOH . ? A HOH 307 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O B K HOH . ? A HOH 305 ? 1_555 146.3 ? 29 O ? K HOH . ? A HOH 309 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O B K HOH . ? A HOH 305 ? 1_555 63.7 ? 30 O ? K HOH . ? A HOH 306 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O B K HOH . ? A HOH 305 ? 1_555 76.3 ? 31 O ? K HOH . ? A HOH 308 ? 1_555 CD ? H CD . ? A CD 227 ? 1_555 O B K HOH . ? A HOH 305 ? 1_555 125.8 ? 32 O ? K HOH . ? A HOH 241 ? 1_555 CD ? B CD . ? A CD 221 ? 1_555 O ? K HOH . ? A HOH 400 ? 1_555 91.3 ? 33 O ? K HOH . ? A HOH 241 ? 1_555 CD ? B CD . ? A CD 221 ? 1_555 ND1 ? A HIS 162 ? A HIS 162 ? 1_555 93.3 ? 34 O ? K HOH . ? A HOH 400 ? 1_555 CD ? B CD . ? A CD 221 ? 1_555 ND1 ? A HIS 162 ? A HIS 162 ? 1_555 116.0 ? 35 O ? K HOH . ? A HOH 303 ? 1_555 CD ? E CD . ? A CD 224 ? 1_555 O ? K HOH . ? A HOH 328 ? 1_555 97.0 ? 36 OD2 ? A ASP 111 ? A ASP 111 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 OD1 ? A ASP 111 ? A ASP 111 ? 1_555 57.4 ? 37 OD2 ? A ASP 111 ? A ASP 111 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 O B K HOH . ? A HOH 403 ? 1_555 127.0 ? 38 OD1 ? A ASP 111 ? A ASP 111 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 O B K HOH . ? A HOH 403 ? 1_555 69.6 ? 39 OD2 ? A ASP 111 ? A ASP 111 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 O ? K HOH . ? A HOH 278 ? 1_555 108.8 ? 40 OD1 ? A ASP 111 ? A ASP 111 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 O ? K HOH . ? A HOH 278 ? 1_555 138.8 ? 41 O B K HOH . ? A HOH 403 ? 1_555 CD ? F CD . ? A CD 225 ? 1_555 O ? K HOH . ? A HOH 278 ? 1_555 110.4 ? 42 O ? K HOH . ? A HOH 329 ? 1_555 CD ? G CD . ? A CD 226 ? 1_555 OD1 ? A ASP 72 ? A ASP 72 ? 1_555 102.0 ? 43 O ? K HOH . ? A HOH 329 ? 1_555 CD ? G CD . ? A CD 226 ? 1_555 O ? K HOH . ? A HOH 269 ? 1_555 100.2 ? 44 OD1 ? A ASP 72 ? A ASP 72 ? 1_555 CD ? G CD . ? A CD 226 ? 1_555 O ? K HOH . ? A HOH 269 ? 1_555 107.6 ? 45 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CD ? I CD . ? A CD 228 ? 1_555 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 49.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-03 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 2 RESOLVE . ? program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 DENZO . ? ? ? ? 'data reduction' ? ? ? 7 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? # _pdbx_entry_details.entry_id 3P5V _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. THIS SEQUENCE WILL BE DEPOSITED IN THE SEQUENCE DATABASE.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 O _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 24 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 SER _pdbx_validate_rmsd_angle.auth_seq_id_2 24 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CSO _pdbx_validate_rmsd_angle.auth_seq_id_3 25 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 107.12 _pdbx_validate_rmsd_angle.angle_target_value 122.70 _pdbx_validate_rmsd_angle.angle_deviation -15.58 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 211 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -145.52 _pdbx_validate_torsion.psi 58.43 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id SER _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 24 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 18.39 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 221 1 CD CD A . C 2 CD 1 222 2 CD CD A . D 2 CD 1 223 3 CD CD A . E 2 CD 1 224 4 CD CD A . F 2 CD 1 225 5 CD CD A . G 2 CD 1 226 6 CD CD A . H 2 CD 1 227 7 CD CD A . I 2 CD 1 228 8 CD CD A . J 2 CD 1 229 9 CD CD A . K 3 HOH 1 230 1 HOH HOH A . K 3 HOH 2 231 2 HOH HOH A . K 3 HOH 3 232 3 HOH HOH A . K 3 HOH 4 233 4 HOH HOH A . K 3 HOH 5 234 5 HOH HOH A . K 3 HOH 6 235 6 HOH HOH A . K 3 HOH 7 236 7 HOH HOH A . K 3 HOH 8 237 8 HOH HOH A . K 3 HOH 9 238 9 HOH HOH A . K 3 HOH 10 239 10 HOH HOH A . K 3 HOH 11 240 11 HOH HOH A . K 3 HOH 12 241 12 HOH HOH A . K 3 HOH 13 242 13 HOH HOH A . K 3 HOH 14 243 14 HOH HOH A . K 3 HOH 15 244 15 HOH HOH A . K 3 HOH 16 245 16 HOH HOH A . K 3 HOH 17 246 17 HOH HOH A . K 3 HOH 18 247 18 HOH HOH A . K 3 HOH 19 248 19 HOH HOH A . K 3 HOH 20 249 20 HOH HOH A . K 3 HOH 21 250 21 HOH HOH A . K 3 HOH 22 251 22 HOH HOH A . K 3 HOH 23 252 23 HOH HOH A . K 3 HOH 24 253 24 HOH HOH A . K 3 HOH 25 254 25 HOH HOH A . K 3 HOH 26 255 26 HOH HOH A . K 3 HOH 27 256 27 HOH HOH A . K 3 HOH 28 257 28 HOH HOH A . K 3 HOH 29 258 29 HOH HOH A . K 3 HOH 30 259 30 HOH HOH A . K 3 HOH 31 260 31 HOH HOH A . K 3 HOH 32 261 32 HOH HOH A . K 3 HOH 33 262 33 HOH HOH A . K 3 HOH 34 263 34 HOH HOH A . K 3 HOH 35 264 35 HOH HOH A . K 3 HOH 36 265 36 HOH HOH A . K 3 HOH 37 266 37 HOH HOH A . K 3 HOH 38 267 38 HOH HOH A . K 3 HOH 39 268 39 HOH HOH A . K 3 HOH 40 269 40 HOH HOH A . K 3 HOH 41 270 41 HOH HOH A . K 3 HOH 42 271 42 HOH HOH A . K 3 HOH 43 272 43 HOH HOH A . K 3 HOH 44 273 44 HOH HOH A . K 3 HOH 45 274 45 HOH HOH A . K 3 HOH 46 275 46 HOH HOH A . K 3 HOH 47 276 47 HOH HOH A . K 3 HOH 48 277 48 HOH HOH A . K 3 HOH 49 278 49 HOH HOH A . K 3 HOH 50 279 50 HOH HOH A . K 3 HOH 51 280 51 HOH HOH A . K 3 HOH 52 281 52 HOH HOH A . K 3 HOH 53 282 53 HOH HOH A . K 3 HOH 54 283 54 HOH HOH A . K 3 HOH 55 284 55 HOH HOH A . K 3 HOH 56 285 56 HOH HOH A . K 3 HOH 57 286 57 HOH HOH A . K 3 HOH 58 287 58 HOH HOH A . K 3 HOH 59 288 59 HOH HOH A . K 3 HOH 60 289 60 HOH HOH A . K 3 HOH 61 290 61 HOH HOH A . K 3 HOH 62 291 62 HOH HOH A . K 3 HOH 63 292 63 HOH HOH A . K 3 HOH 64 293 64 HOH HOH A . K 3 HOH 65 294 65 HOH HOH A . K 3 HOH 66 295 66 HOH HOH A . K 3 HOH 67 296 67 HOH HOH A . K 3 HOH 68 297 68 HOH HOH A . K 3 HOH 69 298 69 HOH HOH A . K 3 HOH 70 299 70 HOH HOH A . K 3 HOH 71 300 71 HOH HOH A . K 3 HOH 72 301 72 HOH HOH A . K 3 HOH 73 302 73 HOH HOH A . K 3 HOH 74 303 74 HOH HOH A . K 3 HOH 75 304 75 HOH HOH A . K 3 HOH 76 305 76 HOH HOH A . K 3 HOH 77 306 77 HOH HOH A . K 3 HOH 78 307 78 HOH HOH A . K 3 HOH 79 308 79 HOH HOH A . K 3 HOH 80 309 80 HOH HOH A . K 3 HOH 81 310 81 HOH HOH A . K 3 HOH 82 311 82 HOH HOH A . K 3 HOH 83 312 83 HOH HOH A . K 3 HOH 84 313 84 HOH HOH A . K 3 HOH 85 314 85 HOH HOH A . K 3 HOH 86 315 86 HOH HOH A . K 3 HOH 87 316 87 HOH HOH A . K 3 HOH 88 317 88 HOH HOH A . K 3 HOH 89 318 89 HOH HOH A . K 3 HOH 90 319 90 HOH HOH A . K 3 HOH 91 320 91 HOH HOH A . K 3 HOH 92 321 92 HOH HOH A . K 3 HOH 93 322 93 HOH HOH A . K 3 HOH 94 323 94 HOH HOH A . K 3 HOH 95 324 95 HOH HOH A . K 3 HOH 96 325 96 HOH HOH A . K 3 HOH 97 326 97 HOH HOH A . K 3 HOH 98 327 98 HOH HOH A . K 3 HOH 99 328 99 HOH HOH A . K 3 HOH 100 329 100 HOH HOH A . K 3 HOH 101 330 101 HOH HOH A . K 3 HOH 102 331 102 HOH HOH A . K 3 HOH 103 332 103 HOH HOH A . K 3 HOH 104 333 104 HOH HOH A . K 3 HOH 105 334 105 HOH HOH A . K 3 HOH 106 335 106 HOH HOH A . K 3 HOH 107 336 107 HOH HOH A . K 3 HOH 108 337 108 HOH HOH A . K 3 HOH 109 338 109 HOH HOH A . K 3 HOH 110 339 110 HOH HOH A . K 3 HOH 111 340 111 HOH HOH A . K 3 HOH 112 341 112 HOH HOH A . K 3 HOH 113 342 113 HOH HOH A . K 3 HOH 114 343 114 HOH HOH A . K 3 HOH 115 344 115 HOH HOH A . K 3 HOH 116 345 116 HOH HOH A . K 3 HOH 117 346 117 HOH HOH A . K 3 HOH 118 347 118 HOH HOH A . K 3 HOH 119 348 119 HOH HOH A . K 3 HOH 120 349 120 HOH HOH A . K 3 HOH 121 350 121 HOH HOH A . K 3 HOH 122 351 122 HOH HOH A . K 3 HOH 123 352 123 HOH HOH A . K 3 HOH 124 353 124 HOH HOH A . K 3 HOH 125 354 125 HOH HOH A . K 3 HOH 126 355 126 HOH HOH A . K 3 HOH 127 356 127 HOH HOH A . K 3 HOH 128 357 128 HOH HOH A . K 3 HOH 129 358 129 HOH HOH A . K 3 HOH 130 359 130 HOH HOH A . K 3 HOH 131 360 131 HOH HOH A . K 3 HOH 132 361 132 HOH HOH A . K 3 HOH 133 362 133 HOH HOH A . K 3 HOH 134 363 134 HOH HOH A . K 3 HOH 135 364 135 HOH HOH A . K 3 HOH 136 365 136 HOH HOH A . K 3 HOH 137 366 137 HOH HOH A . K 3 HOH 138 367 138 HOH HOH A . K 3 HOH 139 368 139 HOH HOH A . K 3 HOH 140 369 140 HOH HOH A . K 3 HOH 141 370 141 HOH HOH A . K 3 HOH 142 371 142 HOH HOH A . K 3 HOH 143 372 143 HOH HOH A . K 3 HOH 144 373 144 HOH HOH A . K 3 HOH 145 374 145 HOH HOH A . K 3 HOH 146 375 146 HOH HOH A . K 3 HOH 147 376 147 HOH HOH A . K 3 HOH 148 377 148 HOH HOH A . K 3 HOH 149 378 149 HOH HOH A . K 3 HOH 150 379 150 HOH HOH A . K 3 HOH 151 380 151 HOH HOH A . K 3 HOH 152 381 152 HOH HOH A . K 3 HOH 153 382 153 HOH HOH A . K 3 HOH 154 383 154 HOH HOH A . K 3 HOH 155 384 155 HOH HOH A . K 3 HOH 156 385 156 HOH HOH A . K 3 HOH 157 386 157 HOH HOH A . K 3 HOH 158 387 158 HOH HOH A . K 3 HOH 159 388 159 HOH HOH A . K 3 HOH 160 389 160 HOH HOH A . K 3 HOH 161 390 161 HOH HOH A . K 3 HOH 162 391 162 HOH HOH A . K 3 HOH 163 392 163 HOH HOH A . K 3 HOH 164 393 164 HOH HOH A . K 3 HOH 165 394 165 HOH HOH A . K 3 HOH 166 395 166 HOH HOH A . K 3 HOH 167 396 167 HOH HOH A . K 3 HOH 168 397 168 HOH HOH A . K 3 HOH 169 398 169 HOH HOH A . K 3 HOH 170 399 170 HOH HOH A . K 3 HOH 171 400 171 HOH HOH A . K 3 HOH 172 401 172 HOH HOH A . K 3 HOH 173 402 173 HOH HOH A . K 3 HOH 174 403 174 HOH HOH A . K 3 HOH 175 404 175 HOH HOH A . K 3 HOH 176 405 176 HOH HOH A . K 3 HOH 177 406 177 HOH HOH A . K 3 HOH 178 407 178 HOH HOH A . K 3 HOH 179 408 179 HOH HOH A . K 3 HOH 180 409 180 HOH HOH A . K 3 HOH 181 410 181 HOH HOH A . K 3 HOH 182 411 182 HOH HOH A . K 3 HOH 183 412 183 HOH HOH A . K 3 HOH 184 413 184 HOH HOH A . K 3 HOH 185 414 185 HOH HOH A . K 3 HOH 186 415 186 HOH HOH A . K 3 HOH 187 416 187 HOH HOH A . K 3 HOH 188 417 188 HOH HOH A . K 3 HOH 189 418 189 HOH HOH A . K 3 HOH 190 419 190 HOH HOH A . K 3 HOH 191 420 191 HOH HOH A . K 3 HOH 192 421 192 HOH HOH A . K 3 HOH 193 422 193 HOH HOH A . K 3 HOH 194 423 194 HOH HOH A . K 3 HOH 195 424 195 HOH HOH A . K 3 HOH 196 425 196 HOH HOH A . K 3 HOH 197 426 197 HOH HOH A . K 3 HOH 198 427 198 HOH HOH A . K 3 HOH 199 428 199 HOH HOH A . K 3 HOH 200 429 200 HOH HOH A . K 3 HOH 201 430 201 HOH HOH A . K 3 HOH 202 431 202 HOH HOH A . K 3 HOH 203 432 203 HOH HOH A . K 3 HOH 204 433 204 HOH HOH A . K 3 HOH 205 434 205 HOH HOH A . K 3 HOH 206 435 206 HOH HOH A . K 3 HOH 207 436 207 HOH HOH A . K 3 HOH 208 437 208 HOH HOH A . K 3 HOH 209 438 209 HOH HOH A . K 3 HOH 210 439 210 HOH HOH A . K 3 HOH 211 440 211 HOH HOH A . K 3 HOH 212 441 212 HOH HOH A . K 3 HOH 213 442 213 HOH HOH A . K 3 HOH 214 443 214 HOH HOH A . K 3 HOH 215 444 215 HOH HOH A . K 3 HOH 216 445 216 HOH HOH A . #