HEADER UNKNOWN FUNCTION 11-OCT-10 3P69 TITLE CRYSTAL STRUCTURE OF A PUTATIVE SECRETED PROTEIN (BF4250) FROM TITLE 2 BACTEROIDES FRAGILIS NCTC 9343 AT 2.05 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 27-159; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: ATCC 25285 / NCTC 9343; SOURCE 5 GENE: BF4250; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS CARBOHYDRATE METABOLISM, PUTATIVE GLYCOSIDE HYDROLASE, IG-LIKE, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3P69 1 REMARK SEQADV LINK REVDAT 4 25-OCT-17 3P69 1 REMARK REVDAT 3 24-DEC-14 3P69 1 TITLE REVDAT 2 20-JUL-11 3P69 1 KEYWDS REVDAT 1 27-OCT-10 3P69 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BF4250) FROM JRNL TITL 2 BACTEROIDES FRAGILIS NCTC 9343 AT 2.05 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 29479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1499 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.12 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2861 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2132 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2711 REMARK 3 BIN R VALUE (WORKING SET) : 0.2113 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.24 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 150 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1944 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 266 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.53520 REMARK 3 B22 (A**2) : 1.53520 REMARK 3 B33 (A**2) : -3.07040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2073 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2821 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 968 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 51 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 309 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2073 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 283 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2488 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.38 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -0.8844 36.8107 -0.0039 REMARK 3 T TENSOR REMARK 3 T11: -0.0567 T22: -0.1563 REMARK 3 T33: -0.1011 T12: 0.0039 REMARK 3 T13: 0.0569 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.7715 L22: 7.8114 REMARK 3 L33: 3.5556 L12: 1.4290 REMARK 3 L13: -0.3607 L23: -3.3702 REMARK 3 S TENSOR REMARK 3 S11: -0.1367 S12: 0.1883 S13: 0.0884 REMARK 3 S21: 0.0309 S22: 0.3466 S23: 0.2262 REMARK 3 S31: -0.3493 S32: -0.1951 S33: -0.2100 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 2.6577 20.1097 23.5346 REMARK 3 T TENSOR REMARK 3 T11: -0.0110 T22: -0.1153 REMARK 3 T33: 0.0006 T12: -0.0203 REMARK 3 T13: 0.0445 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 1.2826 L22: 0.8306 REMARK 3 L33: 2.1454 L12: -0.4384 REMARK 3 L13: 0.8337 L23: -0.9412 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.1125 S13: 0.1518 REMARK 3 S21: 0.0814 S22: 0.0179 S23: -0.0878 REMARK 3 S31: -0.3369 S32: -0.0774 S33: -0.0234 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE REFINEMENT WAS RESTRAINED AGAINST THE MAD REMARK 3 PHASES. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). 5. GLYCEROL (GOL), USED AS REMARK 3 A CRYOPROTECTANT AND CHLORIDE (CL) FROM THE PROTEIN BUFFER HAVE REMARK 3 BEEN MODELED INTO THE STRUCTURE. REMARK 4 REMARK 4 3P69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97898,0.97922,0.91837,0.97881 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29482 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 29.914 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.01300 REMARK 200 R SYM FOR SHELL (I) : 1.25900 REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7510M AMMONIUM SULFATE, NANODROP, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 63.53700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.68310 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 50.20200 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 63.53700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 36.68310 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 50.20200 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 63.53700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 36.68310 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.20200 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 63.53700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 36.68310 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 50.20200 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 63.53700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 36.68310 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 50.20200 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 63.53700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 36.68310 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.20200 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.36621 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 100.40400 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 73.36621 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 100.40400 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 73.36621 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 100.40400 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 73.36621 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 100.40400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 73.36621 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 100.40400 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 73.36621 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 100.40400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN REMARK 300 SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 27 REMARK 465 LYS A 28 REMARK 465 GLU A 29 REMARK 465 ASP A 30 REMARK 465 LEU A 31 REMARK 465 PRO A 32 REMARK 465 ALA A 33 REMARK 465 TYR A 34 REMARK 465 GLY B 0 REMARK 465 SER B 27 REMARK 465 LYS B 28 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 36 CD OE1 OE2 REMARK 470 ARG A 117 NE CZ NH1 NH2 REMARK 470 ASP A 122 CG OD1 OD2 REMARK 470 LYS A 126 CE NZ REMARK 470 LYS A 148 CE NZ REMARK 470 ASP B 122 CG OD1 OD2 REMARK 470 ARG B 135 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 105 70.55 -151.81 REMARK 500 ASP A 122 -128.45 43.37 REMARK 500 ASP B 122 -121.13 36.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 167 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416701 RELATED DB: TARGETDB REMARK 900 RELATED ID: 3OWR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BF4250) FROM REMARK 900 BACTEROIDES FRAGILIS NCTC 9343 AT 2.05 A RESOLUTION (TETRAGONAL REMARK 900 FORM) REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 27-159) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3P69 A 27 159 UNP Q5L7M9 Q5L7M9_BACFN 27 159 DBREF 3P69 B 27 159 UNP Q5L7M9 Q5L7M9_BACFN 27 159 SEQADV 3P69 GLY A 0 UNP Q5L7M9 EXPRESSION TAG SEQADV 3P69 GLY B 0 UNP Q5L7M9 EXPRESSION TAG SEQRES 1 A 134 GLY SER LYS GLU ASP LEU PRO ALA TYR GLU GLU ALA GLU SEQRES 2 A 134 ILE THR LYS VAL GLY ALA TYR HIS ARG PHE TYR SER GLY SEQRES 3 A 134 ASP LYS ASP ALA ILE THR GLY GLU ASN ILE VAL ALA GLU SEQRES 4 A 134 LYS GLU LEU ASP ARG THR ASN ASN ILE ASP SER GLU HIS SEQRES 5 A 134 GLY VAL ALA THR ALA VAL PHE THR ILE PRO ALA ALA GLY SEQRES 6 A 134 GLY LYS PHE THR GLU ALA GLU ARG ALA LYS VAL SER LEU SEQRES 7 A 134 SER ASN LEU VAL VAL TYR VAL ASN VAL SER THR ALA ALA SEQRES 8 A 134 ARG VAL THR PRO LEU ASP GLY SER PRO LYS PHE GLY VAL SEQRES 9 A 134 PRO ALA ASP TRP THR ARG GLU HIS LYS TYR SER VAL MSE SEQRES 10 A 134 ALA ALA ASP GLY THR LYS LYS ILE TRP THR VAL LYS VAL SEQRES 11 A 134 THR LEU ASN LYS SEQRES 1 B 134 GLY SER LYS GLU ASP LEU PRO ALA TYR GLU GLU ALA GLU SEQRES 2 B 134 ILE THR LYS VAL GLY ALA TYR HIS ARG PHE TYR SER GLY SEQRES 3 B 134 ASP LYS ASP ALA ILE THR GLY GLU ASN ILE VAL ALA GLU SEQRES 4 B 134 LYS GLU LEU ASP ARG THR ASN ASN ILE ASP SER GLU HIS SEQRES 5 B 134 GLY VAL ALA THR ALA VAL PHE THR ILE PRO ALA ALA GLY SEQRES 6 B 134 GLY LYS PHE THR GLU ALA GLU ARG ALA LYS VAL SER LEU SEQRES 7 B 134 SER ASN LEU VAL VAL TYR VAL ASN VAL SER THR ALA ALA SEQRES 8 B 134 ARG VAL THR PRO LEU ASP GLY SER PRO LYS PHE GLY VAL SEQRES 9 B 134 PRO ALA ASP TRP THR ARG GLU HIS LYS TYR SER VAL MSE SEQRES 10 B 134 ALA ALA ASP GLY THR LYS LYS ILE TRP THR VAL LYS VAL SEQRES 11 B 134 THR LEU ASN LYS MODRES 3P69 MSE A 142 MET SELENOMETHIONINE MODRES 3P69 MSE B 142 MET SELENOMETHIONINE HET MSE A 142 8 HET MSE B 142 8 HET GOL A 160 6 HET GOL A 162 6 HET GOL A 163 6 HET GOL A 164 6 HET GOL A 165 6 HET CL A 168 1 HET CL B 166 1 HET CL B 167 1 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 CL 3(CL 1-) FORMUL 11 HOH *266(H2 O) HELIX 1 1 THR A 94 ALA A 99 1 6 HELIX 2 2 LYS A 100 VAL A 101 5 2 HELIX 3 3 SER A 102 ASN A 105 5 4 HELIX 4 4 THR B 94 ALA B 99 1 6 HELIX 5 5 LYS B 100 VAL B 101 5 2 HELIX 6 6 SER B 102 ASN B 105 5 4 SHEET 1 A 4 ASN A 60 GLU A 66 0 SHEET 2 A 4 ILE A 39 LYS A 53 -1 N ASP A 52 O ILE A 61 SHEET 3 A 4 LEU A 106 VAL A 112 -1 O ASN A 111 N THR A 40 SHEET 4 A 4 PRO A 130 ALA A 131 -1 O ALA A 131 N LEU A 106 SHEET 1 B 5 ASP A 68 ASP A 74 0 SHEET 2 B 5 VAL A 79 THR A 85 -1 O VAL A 79 N ASP A 74 SHEET 3 B 5 LYS A 148 ASN A 158 1 O THR A 152 N ALA A 80 SHEET 4 B 5 HIS A 137 MSE A 142 -1 N HIS A 137 O VAL A 153 SHEET 5 B 5 ARG A 117 PRO A 120 -1 N ARG A 117 O MSE A 142 SHEET 1 C 4 ASN B 60 GLU B 66 0 SHEET 2 C 4 ILE B 39 LYS B 53 -1 N ASP B 52 O ILE B 61 SHEET 3 C 4 LEU B 106 VAL B 112 -1 O ASN B 111 N THR B 40 SHEET 4 C 4 PRO B 130 ALA B 131 -1 O ALA B 131 N LEU B 106 SHEET 1 D 5 ASP B 68 ASP B 74 0 SHEET 2 D 5 VAL B 79 THR B 85 -1 O VAL B 79 N ASP B 74 SHEET 3 D 5 LYS B 148 ASN B 158 1 O THR B 152 N ALA B 80 SHEET 4 D 5 HIS B 137 MSE B 142 -1 N HIS B 137 O VAL B 153 SHEET 5 D 5 ARG B 117 PRO B 120 -1 N ARG B 117 O MSE B 142 LINK C VAL A 141 N MSE A 142 1555 1555 1.33 LINK C MSE A 142 N ALA A 143 1555 1555 1.34 LINK C VAL B 141 N MSE B 142 1555 1555 1.34 LINK C MSE B 142 N ALA B 143 1555 1555 1.34 SITE 1 AC1 5 GLU A 66 LEU A 67 ASP A 68 ARG A 69 SITE 2 AC1 5 GOL A 162 SITE 1 AC2 4 ARG A 69 GOL A 160 HOH A 272 HOH A 313 SITE 1 AC3 4 ILE A 73 ASP A 74 SER A 75 GLU A 76 SITE 1 AC4 3 ARG A 135 GLU A 136 LYS A 154 SITE 1 AC5 6 SER A 102 LEU A 103 SER A 104 THR A 134 SITE 2 AC5 6 LYS A 159 HOH A 257 SITE 1 AC6 1 GLU A 66 SITE 1 AC7 1 ARG B 69 SITE 1 AC8 1 ALA B 115 CRYST1 127.074 127.074 150.606 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007869 0.004543 0.000000 0.00000 SCALE2 0.000000 0.009087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006640 0.00000