data_3P6L # _entry.id 3P6L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3P6L pdb_00003p6l 10.2210/pdb3p6l/pdb RCSB RCSB062020 ? ? WWPDB D_1000062020 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2023-02-01 5 'Structure model' 1 4 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_special_symmetry 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3P6L _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-10-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 396614 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of a Sugar phosphate isomerase/epimerase (BDI_1903) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sugar phosphate isomerase/epimerase' 30181.787 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 4 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 5 water nat water 18.015 179 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQTKAEKNGWRLG(MSE)QSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKG IKIVGTGVYVAEKSSDWEK(MSE)FKFAKA(MSE)DLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENL LKAISGRSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG(MSE)LKELK SQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL ; _entity_poly.pdbx_seq_one_letter_code_can ;GQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIV GTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQSLG SCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGVFSIEYEYNW ENSVPDIKECIQYFNKTANEIL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 396614 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'CITRIC ACID' CIT 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 THR n 1 4 LYS n 1 5 ALA n 1 6 GLU n 1 7 LYS n 1 8 ASN n 1 9 GLY n 1 10 TRP n 1 11 ARG n 1 12 LEU n 1 13 GLY n 1 14 MSE n 1 15 GLN n 1 16 SER n 1 17 TYR n 1 18 SER n 1 19 PHE n 1 20 HIS n 1 21 LEU n 1 22 PHE n 1 23 PRO n 1 24 LEU n 1 25 THR n 1 26 GLU n 1 27 ALA n 1 28 LEU n 1 29 ASP n 1 30 LYS n 1 31 THR n 1 32 GLN n 1 33 GLU n 1 34 LEU n 1 35 GLY n 1 36 LEU n 1 37 LYS n 1 38 TYR n 1 39 ILE n 1 40 GLU n 1 41 ILE n 1 42 TYR n 1 43 PRO n 1 44 GLY n 1 45 HIS n 1 46 LYS n 1 47 LEU n 1 48 GLY n 1 49 GLY n 1 50 LYS n 1 51 TRP n 1 52 GLY n 1 53 ASP n 1 54 LYS n 1 55 VAL n 1 56 PHE n 1 57 ASP n 1 58 PHE n 1 59 ASN n 1 60 LEU n 1 61 ASP n 1 62 ALA n 1 63 GLN n 1 64 THR n 1 65 GLN n 1 66 LYS n 1 67 GLU n 1 68 ILE n 1 69 LYS n 1 70 GLU n 1 71 LEU n 1 72 ALA n 1 73 ALA n 1 74 SER n 1 75 LYS n 1 76 GLY n 1 77 ILE n 1 78 LYS n 1 79 ILE n 1 80 VAL n 1 81 GLY n 1 82 THR n 1 83 GLY n 1 84 VAL n 1 85 TYR n 1 86 VAL n 1 87 ALA n 1 88 GLU n 1 89 LYS n 1 90 SER n 1 91 SER n 1 92 ASP n 1 93 TRP n 1 94 GLU n 1 95 LYS n 1 96 MSE n 1 97 PHE n 1 98 LYS n 1 99 PHE n 1 100 ALA n 1 101 LYS n 1 102 ALA n 1 103 MSE n 1 104 ASP n 1 105 LEU n 1 106 GLU n 1 107 PHE n 1 108 ILE n 1 109 THR n 1 110 CYS n 1 111 GLU n 1 112 PRO n 1 113 ALA n 1 114 LEU n 1 115 SER n 1 116 ASP n 1 117 TRP n 1 118 ASP n 1 119 LEU n 1 120 VAL n 1 121 GLU n 1 122 LYS n 1 123 LEU n 1 124 SER n 1 125 LYS n 1 126 GLN n 1 127 TYR n 1 128 ASN n 1 129 ILE n 1 130 LYS n 1 131 ILE n 1 132 SER n 1 133 VAL n 1 134 HIS n 1 135 ASN n 1 136 HIS n 1 137 PRO n 1 138 GLN n 1 139 PRO n 1 140 SER n 1 141 ASP n 1 142 TYR n 1 143 TRP n 1 144 LYS n 1 145 PRO n 1 146 GLU n 1 147 ASN n 1 148 LEU n 1 149 LEU n 1 150 LYS n 1 151 ALA n 1 152 ILE n 1 153 SER n 1 154 GLY n 1 155 ARG n 1 156 SER n 1 157 GLN n 1 158 SER n 1 159 LEU n 1 160 GLY n 1 161 SER n 1 162 CYS n 1 163 SER n 1 164 ASP n 1 165 VAL n 1 166 GLY n 1 167 HIS n 1 168 TRP n 1 169 ARG n 1 170 ARG n 1 171 GLU n 1 172 GLY n 1 173 LEU n 1 174 ASN n 1 175 GLN n 1 176 ILE n 1 177 ASP n 1 178 CYS n 1 179 LEU n 1 180 LYS n 1 181 GLN n 1 182 LEU n 1 183 LYS n 1 184 GLY n 1 185 ARG n 1 186 ILE n 1 187 ILE n 1 188 SER n 1 189 LEU n 1 190 HIS n 1 191 PHE n 1 192 LYS n 1 193 ASP n 1 194 ILE n 1 195 ALA n 1 196 PRO n 1 197 LYS n 1 198 LYS n 1 199 ALA n 1 200 GLY n 1 201 GLU n 1 202 ASN n 1 203 GLU n 1 204 GLN n 1 205 HIS n 1 206 ASP n 1 207 VAL n 1 208 ILE n 1 209 TRP n 1 210 GLY n 1 211 THR n 1 212 GLY n 1 213 ILE n 1 214 LEU n 1 215 ASP n 1 216 VAL n 1 217 LYS n 1 218 GLY n 1 219 MSE n 1 220 LEU n 1 221 LYS n 1 222 GLU n 1 223 LEU n 1 224 LYS n 1 225 SER n 1 226 GLN n 1 227 ASN n 1 228 PHE n 1 229 LYS n 1 230 GLY n 1 231 VAL n 1 232 PHE n 1 233 SER n 1 234 ILE n 1 235 GLU n 1 236 TYR n 1 237 GLU n 1 238 TYR n 1 239 ASN n 1 240 TRP n 1 241 GLU n 1 242 ASN n 1 243 SER n 1 244 VAL n 1 245 PRO n 1 246 ASP n 1 247 ILE n 1 248 LYS n 1 249 GLU n 1 250 CYS n 1 251 ILE n 1 252 GLN n 1 253 TYR n 1 254 PHE n 1 255 ASN n 1 256 LYS n 1 257 THR n 1 258 ALA n 1 259 ASN n 1 260 GLU n 1 261 ILE n 1 262 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_1903 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 GLN 2 24 24 GLN GLN A . n A 1 3 THR 3 25 25 THR THR A . n A 1 4 LYS 4 26 26 LYS LYS A . n A 1 5 ALA 5 27 27 ALA ALA A . n A 1 6 GLU 6 28 28 GLU GLU A . n A 1 7 LYS 7 29 29 LYS LYS A . n A 1 8 ASN 8 30 30 ASN ASN A . n A 1 9 GLY 9 31 31 GLY GLY A . n A 1 10 TRP 10 32 32 TRP TRP A . n A 1 11 ARG 11 33 33 ARG ARG A . n A 1 12 LEU 12 34 34 LEU LEU A . n A 1 13 GLY 13 35 35 GLY GLY A . n A 1 14 MSE 14 36 36 MSE MSE A . n A 1 15 GLN 15 37 37 GLN GLN A . n A 1 16 SER 16 38 38 SER SER A . n A 1 17 TYR 17 39 39 TYR TYR A . n A 1 18 SER 18 40 40 SER SER A . n A 1 19 PHE 19 41 41 PHE PHE A . n A 1 20 HIS 20 42 42 HIS HIS A . n A 1 21 LEU 21 43 43 LEU LEU A . n A 1 22 PHE 22 44 44 PHE PHE A . n A 1 23 PRO 23 45 45 PRO PRO A . n A 1 24 LEU 24 46 46 LEU LEU A . n A 1 25 THR 25 47 47 THR THR A . n A 1 26 GLU 26 48 48 GLU GLU A . n A 1 27 ALA 27 49 49 ALA ALA A . n A 1 28 LEU 28 50 50 LEU LEU A . n A 1 29 ASP 29 51 51 ASP ASP A . n A 1 30 LYS 30 52 52 LYS LYS A . n A 1 31 THR 31 53 53 THR THR A . n A 1 32 GLN 32 54 54 GLN GLN A . n A 1 33 GLU 33 55 55 GLU GLU A . n A 1 34 LEU 34 56 56 LEU LEU A . n A 1 35 GLY 35 57 57 GLY GLY A . n A 1 36 LEU 36 58 58 LEU LEU A . n A 1 37 LYS 37 59 59 LYS LYS A . n A 1 38 TYR 38 60 60 TYR TYR A . n A 1 39 ILE 39 61 61 ILE ILE A . n A 1 40 GLU 40 62 62 GLU GLU A . n A 1 41 ILE 41 63 63 ILE ILE A . n A 1 42 TYR 42 64 64 TYR TYR A . n A 1 43 PRO 43 65 65 PRO PRO A . n A 1 44 GLY 44 66 66 GLY GLY A . n A 1 45 HIS 45 67 67 HIS HIS A . n A 1 46 LYS 46 68 68 LYS LYS A . n A 1 47 LEU 47 69 69 LEU LEU A . n A 1 48 GLY 48 70 70 GLY GLY A . n A 1 49 GLY 49 71 71 GLY GLY A . n A 1 50 LYS 50 72 72 LYS LYS A . n A 1 51 TRP 51 73 73 TRP TRP A . n A 1 52 GLY 52 74 74 GLY GLY A . n A 1 53 ASP 53 75 75 ASP ASP A . n A 1 54 LYS 54 76 76 LYS LYS A . n A 1 55 VAL 55 77 77 VAL VAL A . n A 1 56 PHE 56 78 78 PHE PHE A . n A 1 57 ASP 57 79 79 ASP ASP A . n A 1 58 PHE 58 80 80 PHE PHE A . n A 1 59 ASN 59 81 81 ASN ASN A . n A 1 60 LEU 60 82 82 LEU LEU A . n A 1 61 ASP 61 83 83 ASP ASP A . n A 1 62 ALA 62 84 84 ALA ALA A . n A 1 63 GLN 63 85 85 GLN GLN A . n A 1 64 THR 64 86 86 THR THR A . n A 1 65 GLN 65 87 87 GLN GLN A . n A 1 66 LYS 66 88 88 LYS LYS A . n A 1 67 GLU 67 89 89 GLU GLU A . n A 1 68 ILE 68 90 90 ILE ILE A . n A 1 69 LYS 69 91 91 LYS LYS A . n A 1 70 GLU 70 92 92 GLU GLU A . n A 1 71 LEU 71 93 93 LEU LEU A . n A 1 72 ALA 72 94 94 ALA ALA A . n A 1 73 ALA 73 95 95 ALA ALA A . n A 1 74 SER 74 96 96 SER SER A . n A 1 75 LYS 75 97 97 LYS LYS A . n A 1 76 GLY 76 98 98 GLY GLY A . n A 1 77 ILE 77 99 99 ILE ILE A . n A 1 78 LYS 78 100 100 LYS LYS A . n A 1 79 ILE 79 101 101 ILE ILE A . n A 1 80 VAL 80 102 102 VAL VAL A . n A 1 81 GLY 81 103 103 GLY GLY A . n A 1 82 THR 82 104 104 THR THR A . n A 1 83 GLY 83 105 105 GLY GLY A . n A 1 84 VAL 84 106 106 VAL VAL A . n A 1 85 TYR 85 107 107 TYR TYR A . n A 1 86 VAL 86 108 108 VAL VAL A . n A 1 87 ALA 87 109 109 ALA ALA A . n A 1 88 GLU 88 110 110 GLU GLU A . n A 1 89 LYS 89 111 111 LYS LYS A . n A 1 90 SER 90 112 112 SER SER A . n A 1 91 SER 91 113 113 SER SER A . n A 1 92 ASP 92 114 114 ASP ASP A . n A 1 93 TRP 93 115 115 TRP TRP A . n A 1 94 GLU 94 116 116 GLU GLU A . n A 1 95 LYS 95 117 117 LYS LYS A . n A 1 96 MSE 96 118 118 MSE MSE A . n A 1 97 PHE 97 119 119 PHE PHE A . n A 1 98 LYS 98 120 120 LYS LYS A . n A 1 99 PHE 99 121 121 PHE PHE A . n A 1 100 ALA 100 122 122 ALA ALA A . n A 1 101 LYS 101 123 123 LYS LYS A . n A 1 102 ALA 102 124 124 ALA ALA A . n A 1 103 MSE 103 125 125 MSE MSE A . n A 1 104 ASP 104 126 126 ASP ASP A . n A 1 105 LEU 105 127 127 LEU LEU A . n A 1 106 GLU 106 128 128 GLU GLU A . n A 1 107 PHE 107 129 129 PHE PHE A . n A 1 108 ILE 108 130 130 ILE ILE A . n A 1 109 THR 109 131 131 THR THR A . n A 1 110 CYS 110 132 132 CYS CYS A . n A 1 111 GLU 111 133 133 GLU GLU A . n A 1 112 PRO 112 134 134 PRO PRO A . n A 1 113 ALA 113 135 135 ALA ALA A . n A 1 114 LEU 114 136 136 LEU LEU A . n A 1 115 SER 115 137 137 SER SER A . n A 1 116 ASP 116 138 138 ASP ASP A . n A 1 117 TRP 117 139 139 TRP TRP A . n A 1 118 ASP 118 140 140 ASP ASP A . n A 1 119 LEU 119 141 141 LEU LEU A . n A 1 120 VAL 120 142 142 VAL VAL A . n A 1 121 GLU 121 143 143 GLU GLU A . n A 1 122 LYS 122 144 144 LYS LYS A . n A 1 123 LEU 123 145 145 LEU LEU A . n A 1 124 SER 124 146 146 SER SER A . n A 1 125 LYS 125 147 147 LYS LYS A . n A 1 126 GLN 126 148 148 GLN GLN A . n A 1 127 TYR 127 149 149 TYR TYR A . n A 1 128 ASN 128 150 150 ASN ASN A . n A 1 129 ILE 129 151 151 ILE ILE A . n A 1 130 LYS 130 152 152 LYS LYS A . n A 1 131 ILE 131 153 153 ILE ILE A . n A 1 132 SER 132 154 154 SER SER A . n A 1 133 VAL 133 155 155 VAL VAL A . n A 1 134 HIS 134 156 156 HIS HIS A . n A 1 135 ASN 135 157 157 ASN ASN A . n A 1 136 HIS 136 158 158 HIS HIS A . n A 1 137 PRO 137 159 159 PRO PRO A . n A 1 138 GLN 138 160 160 GLN GLN A . n A 1 139 PRO 139 161 161 PRO PRO A . n A 1 140 SER 140 162 162 SER SER A . n A 1 141 ASP 141 163 163 ASP ASP A . n A 1 142 TYR 142 164 164 TYR TYR A . n A 1 143 TRP 143 165 165 TRP TRP A . n A 1 144 LYS 144 166 166 LYS LYS A . n A 1 145 PRO 145 167 167 PRO PRO A . n A 1 146 GLU 146 168 168 GLU GLU A . n A 1 147 ASN 147 169 169 ASN ASN A . n A 1 148 LEU 148 170 170 LEU LEU A . n A 1 149 LEU 149 171 171 LEU LEU A . n A 1 150 LYS 150 172 172 LYS LYS A . n A 1 151 ALA 151 173 173 ALA ALA A . n A 1 152 ILE 152 174 174 ILE ILE A . n A 1 153 SER 153 175 175 SER SER A . n A 1 154 GLY 154 176 176 GLY GLY A . n A 1 155 ARG 155 177 177 ARG ARG A . n A 1 156 SER 156 178 178 SER SER A . n A 1 157 GLN 157 179 179 GLN GLN A . n A 1 158 SER 158 180 180 SER SER A . n A 1 159 LEU 159 181 181 LEU LEU A . n A 1 160 GLY 160 182 182 GLY GLY A . n A 1 161 SER 161 183 183 SER SER A . n A 1 162 CYS 162 184 184 CYS CYS A . n A 1 163 SER 163 185 185 SER SER A . n A 1 164 ASP 164 186 186 ASP ASP A . n A 1 165 VAL 165 187 187 VAL VAL A . n A 1 166 GLY 166 188 188 GLY GLY A . n A 1 167 HIS 167 189 189 HIS HIS A . n A 1 168 TRP 168 190 190 TRP TRP A . n A 1 169 ARG 169 191 191 ARG ARG A . n A 1 170 ARG 170 192 192 ARG ARG A . n A 1 171 GLU 171 193 193 GLU GLU A . n A 1 172 GLY 172 194 194 GLY GLY A . n A 1 173 LEU 173 195 195 LEU LEU A . n A 1 174 ASN 174 196 196 ASN ASN A . n A 1 175 GLN 175 197 197 GLN GLN A . n A 1 176 ILE 176 198 198 ILE ILE A . n A 1 177 ASP 177 199 199 ASP ASP A . n A 1 178 CYS 178 200 200 CYS CYS A . n A 1 179 LEU 179 201 201 LEU LEU A . n A 1 180 LYS 180 202 202 LYS LYS A . n A 1 181 GLN 181 203 203 GLN GLN A . n A 1 182 LEU 182 204 204 LEU LEU A . n A 1 183 LYS 183 205 205 LYS LYS A . n A 1 184 GLY 184 206 206 GLY GLY A . n A 1 185 ARG 185 207 207 ARG ARG A . n A 1 186 ILE 186 208 208 ILE ILE A . n A 1 187 ILE 187 209 209 ILE ILE A . n A 1 188 SER 188 210 210 SER SER A . n A 1 189 LEU 189 211 211 LEU LEU A . n A 1 190 HIS 190 212 212 HIS HIS A . n A 1 191 PHE 191 213 213 PHE PHE A . n A 1 192 LYS 192 214 214 LYS LYS A . n A 1 193 ASP 193 215 215 ASP ASP A . n A 1 194 ILE 194 216 216 ILE ILE A . n A 1 195 ALA 195 217 217 ALA ALA A . n A 1 196 PRO 196 218 218 PRO PRO A . n A 1 197 LYS 197 219 219 LYS LYS A . n A 1 198 LYS 198 220 220 LYS LYS A . n A 1 199 ALA 199 221 221 ALA ALA A . n A 1 200 GLY 200 222 222 GLY GLY A . n A 1 201 GLU 201 223 223 GLU GLU A . n A 1 202 ASN 202 224 224 ASN ASN A . n A 1 203 GLU 203 225 225 GLU GLU A . n A 1 204 GLN 204 226 226 GLN GLN A . n A 1 205 HIS 205 227 227 HIS HIS A . n A 1 206 ASP 206 228 228 ASP ASP A . n A 1 207 VAL 207 229 229 VAL VAL A . n A 1 208 ILE 208 230 230 ILE ILE A . n A 1 209 TRP 209 231 231 TRP TRP A . n A 1 210 GLY 210 232 232 GLY GLY A . n A 1 211 THR 211 233 233 THR THR A . n A 1 212 GLY 212 234 234 GLY GLY A . n A 1 213 ILE 213 235 235 ILE ILE A . n A 1 214 LEU 214 236 236 LEU LEU A . n A 1 215 ASP 215 237 237 ASP ASP A . n A 1 216 VAL 216 238 238 VAL VAL A . n A 1 217 LYS 217 239 239 LYS LYS A . n A 1 218 GLY 218 240 240 GLY GLY A . n A 1 219 MSE 219 241 241 MSE MSE A . n A 1 220 LEU 220 242 242 LEU LEU A . n A 1 221 LYS 221 243 243 LYS LYS A . n A 1 222 GLU 222 244 244 GLU GLU A . n A 1 223 LEU 223 245 245 LEU LEU A . n A 1 224 LYS 224 246 246 LYS LYS A . n A 1 225 SER 225 247 247 SER SER A . n A 1 226 GLN 226 248 248 GLN GLN A . n A 1 227 ASN 227 249 249 ASN ASN A . n A 1 228 PHE 228 250 250 PHE PHE A . n A 1 229 LYS 229 251 251 LYS LYS A . n A 1 230 GLY 230 252 252 GLY GLY A . n A 1 231 VAL 231 253 253 VAL VAL A . n A 1 232 PHE 232 254 254 PHE PHE A . n A 1 233 SER 233 255 255 SER SER A . n A 1 234 ILE 234 256 256 ILE ILE A . n A 1 235 GLU 235 257 257 GLU GLU A . n A 1 236 TYR 236 258 258 TYR TYR A . n A 1 237 GLU 237 259 259 GLU GLU A . n A 1 238 TYR 238 260 260 TYR TYR A . n A 1 239 ASN 239 261 261 ASN ASN A . n A 1 240 TRP 240 262 262 TRP TRP A . n A 1 241 GLU 241 263 263 GLU GLU A . n A 1 242 ASN 242 264 264 ASN ASN A . n A 1 243 SER 243 265 265 SER SER A . n A 1 244 VAL 244 266 266 VAL VAL A . n A 1 245 PRO 245 267 267 PRO PRO A . n A 1 246 ASP 246 268 268 ASP ASP A . n A 1 247 ILE 247 269 269 ILE ILE A . n A 1 248 LYS 248 270 270 LYS LYS A . n A 1 249 GLU 249 271 271 GLU GLU A . n A 1 250 CYS 250 272 272 CYS CYS A . n A 1 251 ILE 251 273 273 ILE ILE A . n A 1 252 GLN 252 274 274 GLN GLN A . n A 1 253 TYR 253 275 275 TYR TYR A . n A 1 254 PHE 254 276 276 PHE PHE A . n A 1 255 ASN 255 277 277 ASN ASN A . n A 1 256 LYS 256 278 278 LYS LYS A . n A 1 257 THR 257 279 279 THR THR A . n A 1 258 ALA 258 280 280 ALA ALA A . n A 1 259 ASN 259 281 281 ASN ASN A . n A 1 260 GLU 260 282 282 GLU GLU A . n A 1 261 ILE 261 283 283 ILE ILE A . n A 1 262 LEU 262 284 284 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 300 300 PO4 PO4 A . C 3 PEG 1 301 301 PEG PEG A . D 3 PEG 1 302 302 PEG PEG A . E 4 CIT 1 303 303 CIT CIT A . F 5 HOH 1 304 304 HOH HOH A . F 5 HOH 2 305 305 HOH HOH A . F 5 HOH 3 306 306 HOH HOH A . F 5 HOH 4 307 307 HOH HOH A . F 5 HOH 5 308 308 HOH HOH A . F 5 HOH 6 309 309 HOH HOH A . F 5 HOH 7 310 310 HOH HOH A . F 5 HOH 8 311 311 HOH HOH A . F 5 HOH 9 312 312 HOH HOH A . F 5 HOH 10 313 313 HOH HOH A . F 5 HOH 11 314 314 HOH HOH A . F 5 HOH 12 315 315 HOH HOH A . F 5 HOH 13 316 316 HOH HOH A . F 5 HOH 14 317 317 HOH HOH A . F 5 HOH 15 318 318 HOH HOH A . F 5 HOH 16 319 319 HOH HOH A . F 5 HOH 17 320 320 HOH HOH A . F 5 HOH 18 321 321 HOH HOH A . F 5 HOH 19 322 322 HOH HOH A . F 5 HOH 20 323 323 HOH HOH A . F 5 HOH 21 324 324 HOH HOH A . F 5 HOH 22 325 325 HOH HOH A . F 5 HOH 23 326 326 HOH HOH A . F 5 HOH 24 327 327 HOH HOH A . F 5 HOH 25 328 328 HOH HOH A . F 5 HOH 26 329 329 HOH HOH A . F 5 HOH 27 330 330 HOH HOH A . F 5 HOH 28 331 331 HOH HOH A . F 5 HOH 29 332 332 HOH HOH A . F 5 HOH 30 333 333 HOH HOH A . F 5 HOH 31 334 334 HOH HOH A . F 5 HOH 32 335 335 HOH HOH A . F 5 HOH 33 336 336 HOH HOH A . F 5 HOH 34 337 337 HOH HOH A . F 5 HOH 35 338 338 HOH HOH A . F 5 HOH 36 339 339 HOH HOH A . F 5 HOH 37 340 340 HOH HOH A . F 5 HOH 38 341 341 HOH HOH A . F 5 HOH 39 342 342 HOH HOH A . F 5 HOH 40 343 343 HOH HOH A . F 5 HOH 41 344 344 HOH HOH A . F 5 HOH 42 345 345 HOH HOH A . F 5 HOH 43 346 346 HOH HOH A . F 5 HOH 44 347 347 HOH HOH A . F 5 HOH 45 348 348 HOH HOH A . F 5 HOH 46 349 349 HOH HOH A . F 5 HOH 47 350 350 HOH HOH A . F 5 HOH 48 351 351 HOH HOH A . F 5 HOH 49 352 352 HOH HOH A . F 5 HOH 50 353 353 HOH HOH A . F 5 HOH 51 354 354 HOH HOH A . F 5 HOH 52 355 355 HOH HOH A . F 5 HOH 53 356 356 HOH HOH A . F 5 HOH 54 357 357 HOH HOH A . F 5 HOH 55 358 358 HOH HOH A . F 5 HOH 56 359 359 HOH HOH A . F 5 HOH 57 360 360 HOH HOH A . F 5 HOH 58 361 361 HOH HOH A . F 5 HOH 59 362 362 HOH HOH A . F 5 HOH 60 363 363 HOH HOH A . F 5 HOH 61 364 364 HOH HOH A . F 5 HOH 62 365 365 HOH HOH A . F 5 HOH 63 366 366 HOH HOH A . F 5 HOH 64 367 367 HOH HOH A . F 5 HOH 65 368 368 HOH HOH A . F 5 HOH 66 369 369 HOH HOH A . F 5 HOH 67 370 370 HOH HOH A . F 5 HOH 68 371 371 HOH HOH A . F 5 HOH 69 372 372 HOH HOH A . F 5 HOH 70 373 373 HOH HOH A . F 5 HOH 71 374 374 HOH HOH A . F 5 HOH 72 375 375 HOH HOH A . F 5 HOH 73 376 376 HOH HOH A . F 5 HOH 74 377 377 HOH HOH A . F 5 HOH 75 378 378 HOH HOH A . F 5 HOH 76 379 379 HOH HOH A . F 5 HOH 77 380 380 HOH HOH A . F 5 HOH 78 381 381 HOH HOH A . F 5 HOH 79 382 382 HOH HOH A . F 5 HOH 80 383 383 HOH HOH A . F 5 HOH 81 384 384 HOH HOH A . F 5 HOH 82 385 385 HOH HOH A . F 5 HOH 83 386 386 HOH HOH A . F 5 HOH 84 387 387 HOH HOH A . F 5 HOH 85 388 388 HOH HOH A . F 5 HOH 86 389 389 HOH HOH A . F 5 HOH 87 390 390 HOH HOH A . F 5 HOH 88 391 391 HOH HOH A . F 5 HOH 89 392 392 HOH HOH A . F 5 HOH 90 393 393 HOH HOH A . F 5 HOH 91 394 394 HOH HOH A . F 5 HOH 92 395 395 HOH HOH A . F 5 HOH 93 396 396 HOH HOH A . F 5 HOH 94 397 397 HOH HOH A . F 5 HOH 95 398 398 HOH HOH A . F 5 HOH 96 399 399 HOH HOH A . F 5 HOH 97 400 400 HOH HOH A . F 5 HOH 98 401 401 HOH HOH A . F 5 HOH 99 402 402 HOH HOH A . F 5 HOH 100 403 403 HOH HOH A . F 5 HOH 101 404 404 HOH HOH A . F 5 HOH 102 405 405 HOH HOH A . F 5 HOH 103 406 406 HOH HOH A . F 5 HOH 104 407 407 HOH HOH A . F 5 HOH 105 408 408 HOH HOH A . F 5 HOH 106 409 409 HOH HOH A . F 5 HOH 107 410 410 HOH HOH A . F 5 HOH 108 411 411 HOH HOH A . F 5 HOH 109 412 412 HOH HOH A . F 5 HOH 110 413 413 HOH HOH A . F 5 HOH 111 414 414 HOH HOH A . F 5 HOH 112 415 415 HOH HOH A . F 5 HOH 113 416 416 HOH HOH A . F 5 HOH 114 417 417 HOH HOH A . F 5 HOH 115 418 418 HOH HOH A . F 5 HOH 116 419 419 HOH HOH A . F 5 HOH 117 420 420 HOH HOH A . F 5 HOH 118 421 421 HOH HOH A . F 5 HOH 119 422 422 HOH HOH A . F 5 HOH 120 423 423 HOH HOH A . F 5 HOH 121 424 424 HOH HOH A . F 5 HOH 122 425 425 HOH HOH A . F 5 HOH 123 426 426 HOH HOH A . F 5 HOH 124 427 427 HOH HOH A . F 5 HOH 125 428 428 HOH HOH A . F 5 HOH 126 429 429 HOH HOH A . F 5 HOH 127 430 430 HOH HOH A . F 5 HOH 128 431 431 HOH HOH A . F 5 HOH 129 432 432 HOH HOH A . F 5 HOH 130 433 433 HOH HOH A . F 5 HOH 131 434 434 HOH HOH A . F 5 HOH 132 435 435 HOH HOH A . F 5 HOH 133 436 436 HOH HOH A . F 5 HOH 134 437 437 HOH HOH A . F 5 HOH 135 438 438 HOH HOH A . F 5 HOH 136 439 439 HOH HOH A . F 5 HOH 137 440 440 HOH HOH A . F 5 HOH 138 441 441 HOH HOH A . F 5 HOH 139 442 442 HOH HOH A . F 5 HOH 140 443 443 HOH HOH A . F 5 HOH 141 444 444 HOH HOH A . F 5 HOH 142 445 445 HOH HOH A . F 5 HOH 143 446 446 HOH HOH A . F 5 HOH 144 447 447 HOH HOH A . F 5 HOH 145 448 448 HOH HOH A . F 5 HOH 146 449 449 HOH HOH A . F 5 HOH 147 450 450 HOH HOH A . F 5 HOH 148 451 451 HOH HOH A . F 5 HOH 149 452 452 HOH HOH A . F 5 HOH 150 453 453 HOH HOH A . F 5 HOH 151 454 454 HOH HOH A . F 5 HOH 152 455 455 HOH HOH A . F 5 HOH 153 456 456 HOH HOH A . F 5 HOH 154 457 457 HOH HOH A . F 5 HOH 155 458 458 HOH HOH A . F 5 HOH 156 459 459 HOH HOH A . F 5 HOH 157 460 460 HOH HOH A . F 5 HOH 158 461 461 HOH HOH A . F 5 HOH 159 462 462 HOH HOH A . F 5 HOH 160 463 463 HOH HOH A . F 5 HOH 161 464 464 HOH HOH A . F 5 HOH 162 465 465 HOH HOH A . F 5 HOH 163 466 466 HOH HOH A . F 5 HOH 164 467 467 HOH HOH A . F 5 HOH 165 468 468 HOH HOH A . F 5 HOH 166 469 469 HOH HOH A . F 5 HOH 167 470 470 HOH HOH A . F 5 HOH 168 471 471 HOH HOH A . F 5 HOH 169 472 472 HOH HOH A . F 5 HOH 170 473 473 HOH HOH A . F 5 HOH 171 474 474 HOH HOH A . F 5 HOH 172 475 475 HOH HOH A . F 5 HOH 173 476 476 HOH HOH A . F 5 HOH 174 477 477 HOH HOH A . F 5 HOH 175 478 478 HOH HOH A . F 5 HOH 176 479 479 HOH HOH A . F 5 HOH 177 480 480 HOH HOH A . F 5 HOH 178 481 481 HOH HOH A . F 5 HOH 179 482 482 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 251 ? CE ? A LYS 229 CE 2 1 Y 1 A LYS 251 ? NZ ? A LYS 229 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 SCALA 3.3.15 2009/03/31 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? # _cell.entry_id 3P6L _cell.length_a 82.382 _cell.length_b 73.014 _cell.length_c 47.536 _cell.angle_alpha 90.000 _cell.angle_beta 103.730 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3P6L _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3P6L # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.33 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '45.5% polyethylene glycol 600, 0.1M phosphate-citrate pH 4.33, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2010-09-16 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL SI (111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9537 1.0 2 0.9796 1.0 3 0.9794 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list 0.9537,0.9796,0.9794 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 3P6L _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 28.638 _reflns.number_all 23324 _reflns.number_obs 23324 _reflns.pdbx_netI_over_sigmaI 7.900 _reflns.pdbx_Rsym_value 0.090 _reflns.pdbx_redundancy 3.000 _reflns.percent_possible_obs 99.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate 22.447 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.850 1.900 ? 5331 ? 0.818 0.8 0.818 ? 3.000 ? 1756 100.000 1 1 1.900 1.950 ? 4858 ? 0.612 0.9 0.612 ? 2.900 ? 1647 99.700 2 1 1.950 2.010 ? 4982 ? 0.504 1.4 0.504 ? 3.000 ? 1635 100.000 3 1 2.010 2.070 ? 4909 ? 0.382 1.2 0.382 ? 3.000 ? 1611 99.900 4 1 2.070 2.140 ? 4581 ? 0.298 1.7 0.298 ? 3.000 ? 1511 99.900 5 1 2.140 2.210 ? 4556 ? 0.215 3.3 0.215 ? 3.100 ? 1485 100.000 6 1 2.210 2.290 ? 4317 ? 0.235 1.7 0.235 ? 2.900 ? 1470 100.000 7 1 2.290 2.390 ? 4222 ? 0.160 4.3 0.160 ? 3.100 ? 1373 100.000 8 1 2.390 2.490 ? 4085 ? 0.127 5.7 0.127 ? 3.100 ? 1329 100.000 9 1 2.490 2.620 ? 3865 ? 0.111 6.4 0.111 ? 3.100 ? 1265 100.000 10 1 2.620 2.760 ? 3667 ? 0.099 6.9 0.099 ? 3.000 ? 1211 100.000 11 1 2.760 2.930 ? 3476 ? 0.076 9.1 0.076 ? 3.100 ? 1133 99.800 12 1 2.930 3.130 ? 3218 ? 0.065 10.2 0.065 ? 3.000 ? 1058 99.300 13 1 3.130 3.380 ? 3030 ? 0.052 12.1 0.052 ? 3.000 ? 994 99.100 14 1 3.380 3.700 ? 2731 ? 0.050 12.8 0.050 ? 3.000 ? 913 98.200 15 1 3.700 4.140 ? 2430 ? 0.045 13.5 0.045 ? 2.900 ? 826 98.800 16 1 4.140 4.780 ? 2048 ? 0.042 14.8 0.042 ? 2.800 ? 733 98.800 17 1 4.780 5.850 ? 1977 ? 0.043 13.6 0.043 ? 3.200 ? 625 99.300 18 1 5.850 8.270 ? 1529 ? 0.042 15.6 0.042 ? 3.200 ? 484 98.900 19 1 8.270 28.638 ? 823 ? 0.042 13.9 0.042 ? 3.100 ? 265 95.800 20 1 # _refine.entry_id 3P6L _refine.ls_d_res_high 1.8500 _refine.ls_d_res_low 28.638 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.1700 _refine.ls_number_reflns_obs 23228 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5.PEG FRAGMENTS (PEG), PHOSPHATE (PO4) AND CITRATE (CIT) FROM THE CRYSTALLIZATION SOLUTION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1889 _refine.ls_R_factor_R_work 0.1862 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2385 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.2000 _refine.ls_number_reflns_R_free 1197 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 27.5871 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.3300 _refine.aniso_B[2][2] -0.9500 _refine.aniso_B[3][3] 1.1300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -2.4000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9580 _refine.correlation_coeff_Fo_to_Fc_free 0.9330 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1480 _refine.overall_SU_ML 0.1190 _refine.overall_SU_B 8.0460 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 63.810 _refine.B_iso_min 9.380 _refine.occupancy_max 1.000 _refine.occupancy_min 0.400 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2112 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 2323 _refine_hist.d_res_high 1.8500 _refine_hist.d_res_low 28.638 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2260 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1584 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3053 1.599 1.962 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3900 0.926 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 281 4.917 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 105 36.347 25.714 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 430 13.898 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 14.707 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 316 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2488 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 429 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1333 1.373 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 548 0.302 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2153 2.339 4.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 927 4.088 6.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 890 5.767 8.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.8500 _refine_ls_shell.d_res_low 1.8980 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.8600 _refine_ls_shell.number_reflns_R_work 1637 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3180 _refine_ls_shell.R_factor_R_free 0.3680 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1730 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3P6L _struct.title ;Crystal structure of a Sugar phosphate isomerase/epimerase (BDI_1903) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'TIM BARREL, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, ISOMERASE' _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.entry_id 3P6L # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LD74_PARD8 _struct_ref.pdbx_db_accession A6LD74 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG TGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQSLGS CSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGVFSIEYEYNWE NSVPDIKECIQYFNKTANEIL ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3P6L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 262 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LD74 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 284 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 284 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3P6L _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6LD74 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2870 ? 2 MORE -11 ? 2 'SSA (A^2)' 22680 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 2 1,2 A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 71.0994817781 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 46.1776577857 # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGEST THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? ASN A 8 ? THR A 25 ASN A 30 1 ? 6 HELX_P HELX_P2 2 TYR A 17 ? HIS A 20 ? TYR A 39 HIS A 42 5 ? 4 HELX_P HELX_P3 3 PRO A 23 ? LEU A 34 ? PRO A 45 LEU A 56 1 ? 12 HELX_P HELX_P4 4 GLY A 48 ? GLY A 52 ? GLY A 70 GLY A 74 5 ? 5 HELX_P HELX_P5 5 ASP A 61 ? LYS A 75 ? ASP A 83 LYS A 97 1 ? 15 HELX_P HELX_P6 6 SER A 91 ? MSE A 103 ? SER A 113 MSE A 125 1 ? 13 HELX_P HELX_P7 7 ALA A 113 ? SER A 115 ? ALA A 135 SER A 137 5 ? 3 HELX_P HELX_P8 8 ASP A 116 ? ASN A 128 ? ASP A 138 ASN A 150 1 ? 13 HELX_P HELX_P9 9 LYS A 144 ? SER A 153 ? LYS A 166 SER A 175 1 ? 10 HELX_P HELX_P10 10 VAL A 165 ? GLU A 171 ? VAL A 187 GLU A 193 1 ? 7 HELX_P HELX_P11 11 ASN A 174 ? LEU A 182 ? ASN A 196 LEU A 204 1 ? 9 HELX_P HELX_P12 12 ASP A 215 ? GLN A 226 ? ASP A 237 GLN A 248 1 ? 12 HELX_P HELX_P13 13 SER A 243 ? LEU A 262 ? SER A 265 LEU A 284 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 13 C ? ? ? 1_555 A MSE 14 N ? ? A GLY 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A MSE 14 C ? ? ? 1_555 A GLN 15 N ? ? A MSE 36 A GLN 37 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? A LYS 95 C ? ? ? 1_555 A MSE 96 N ? ? A LYS 117 A MSE 118 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A MSE 96 C ? ? ? 1_555 A PHE 97 N ? ? A MSE 118 A PHE 119 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale5 covale both ? A ALA 102 C ? ? ? 1_555 A MSE 103 N ? ? A ALA 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale6 covale both ? A MSE 103 C ? ? ? 1_555 A ASP 104 N ? ? A MSE 125 A ASP 126 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A GLY 218 C ? ? ? 1_555 A MSE 219 N ? ? A GLY 240 A MSE 241 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale8 covale both ? A MSE 219 C ? ? ? 1_555 A LEU 220 N ? ? A MSE 241 A LEU 242 1_555 ? ? ? ? ? ? ? 1.339 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 14 ? . . . . MSE A 36 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 96 ? . . . . MSE A 118 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 103 ? . . . . MSE A 125 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 219 ? . . . . MSE A 241 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 83 A . ? GLY 105 A VAL 84 A ? VAL 106 A 1 6.49 2 GLN 138 A . ? GLN 160 A PRO 139 A ? PRO 161 A 1 -0.28 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 10 ? GLN A 15 ? TRP A 32 GLN A 37 A 2 TYR A 38 ? ILE A 41 ? TYR A 60 ILE A 63 A 3 LYS A 78 ? TYR A 85 ? LYS A 100 TYR A 107 A 4 PHE A 107 ? CYS A 110 ? PHE A 129 CYS A 132 A 5 LYS A 130 ? HIS A 134 ? LYS A 152 HIS A 156 A 6 LEU A 159 ? ASP A 164 ? LEU A 181 ASP A 186 A 7 ILE A 186 ? PHE A 191 ? ILE A 208 PHE A 213 A 8 GLY A 230 ? ILE A 234 ? GLY A 252 ILE A 256 A 9 TRP A 10 ? GLN A 15 ? TRP A 32 GLN A 37 B 1 HIS A 45 ? LYS A 46 ? HIS A 67 LYS A 68 B 2 VAL A 55 ? PHE A 56 ? VAL A 77 PHE A 78 C 1 ASP A 193 ? ILE A 194 ? ASP A 215 ILE A 216 C 2 ASP A 206 ? VAL A 207 ? ASP A 228 VAL A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MSE A 14 ? N MSE A 36 O GLU A 40 ? O GLU A 62 A 2 3 N ILE A 39 ? N ILE A 61 O VAL A 80 ? O VAL A 102 A 3 4 N TYR A 85 ? N TYR A 107 O THR A 109 ? O THR A 131 A 4 5 N CYS A 110 ? N CYS A 132 O HIS A 134 ? O HIS A 156 A 5 6 N VAL A 133 ? N VAL A 155 O GLY A 160 ? O GLY A 182 A 6 7 N SER A 163 ? N SER A 185 O HIS A 190 ? O HIS A 212 A 7 8 N LEU A 189 ? N LEU A 211 O VAL A 231 ? O VAL A 253 A 8 9 O ILE A 234 ? O ILE A 256 N GLY A 13 ? N GLY A 35 B 1 2 N HIS A 45 ? N HIS A 67 O PHE A 56 ? O PHE A 78 C 1 2 N ASP A 193 ? N ASP A 215 O VAL A 207 ? O VAL A 229 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 300 ? 8 'BINDING SITE FOR RESIDUE PO4 A 300' AC2 Software A PEG 301 ? 2 'BINDING SITE FOR RESIDUE PEG A 301' AC3 Software A PEG 302 ? 2 'BINDING SITE FOR RESIDUE PEG A 302' AC4 Software A CIT 303 ? 11 'BINDING SITE FOR RESIDUE CIT A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 SER A 153 ? SER A 175 . ? 2_656 ? 2 AC1 8 SER A 153 ? SER A 175 . ? 1_555 ? 3 AC1 8 GLY A 154 ? GLY A 176 . ? 1_555 ? 4 AC1 8 GLY A 154 ? GLY A 176 . ? 2_656 ? 5 AC1 8 ARG A 185 ? ARG A 207 . ? 2_656 ? 6 AC1 8 ARG A 185 ? ARG A 207 . ? 1_555 ? 7 AC1 8 HOH F . ? HOH A 435 . ? 2_656 ? 8 AC1 8 HOH F . ? HOH A 435 . ? 1_555 ? 9 AC2 2 ARG A 169 ? ARG A 191 . ? 1_555 ? 10 AC2 2 ASN A 174 ? ASN A 196 . ? 1_555 ? 11 AC3 2 TYR A 38 ? TYR A 60 . ? 1_555 ? 12 AC3 2 GLY A 76 ? GLY A 98 . ? 1_555 ? 13 AC4 11 TYR A 17 ? TYR A 39 . ? 1_555 ? 14 AC4 11 GLY A 83 ? GLY A 105 . ? 1_555 ? 15 AC4 11 VAL A 84 ? VAL A 106 . ? 1_555 ? 16 AC4 11 HIS A 134 ? HIS A 156 . ? 1_555 ? 17 AC4 11 ASP A 164 ? ASP A 186 . ? 1_555 ? 18 AC4 11 HIS A 167 ? HIS A 189 . ? 1_555 ? 19 AC4 11 HIS A 190 ? HIS A 212 . ? 1_555 ? 20 AC4 11 LYS A 192 ? LYS A 214 . ? 1_555 ? 21 AC4 11 GLU A 235 ? GLU A 257 . ? 1_555 ? 22 AC4 11 GLU A 237 ? GLU A 259 . ? 1_555 ? 23 AC4 11 HOH F . ? HOH A 479 . ? 1_555 ? # _pdbx_entry_details.entry_id 3P6L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT (RESIDUES 24-284) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 36 ? MET SELENOMETHIONINE 2 A MSE 96 A MSE 118 ? MET SELENOMETHIONINE 3 A MSE 103 A MSE 125 ? MET SELENOMETHIONINE 4 A MSE 219 A MSE 241 ? MET SELENOMETHIONINE # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id PO4 _pdbx_struct_special_symmetry.auth_seq_id 300 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id PO4 _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 18.1669 _pdbx_refine_tls.origin_y 5.5991 _pdbx_refine_tls.origin_z 10.9021 _pdbx_refine_tls.T[1][1] 0.0214 _pdbx_refine_tls.T[2][2] 0.0396 _pdbx_refine_tls.T[3][3] 0.0288 _pdbx_refine_tls.T[1][2] 0.0045 _pdbx_refine_tls.T[1][3] 0.0117 _pdbx_refine_tls.T[2][3] -0.0096 _pdbx_refine_tls.L[1][1] 0.9550 _pdbx_refine_tls.L[2][2] 1.3120 _pdbx_refine_tls.L[3][3] 1.7891 _pdbx_refine_tls.L[1][2] 0.1511 _pdbx_refine_tls.L[1][3] 0.0836 _pdbx_refine_tls.L[2][3] -0.1587 _pdbx_refine_tls.S[1][1] 0.0064 _pdbx_refine_tls.S[2][2] 0.0013 _pdbx_refine_tls.S[3][3] -0.0077 _pdbx_refine_tls.S[1][2] 0.0893 _pdbx_refine_tls.S[1][3] -0.1375 _pdbx_refine_tls.S[2][3] -0.0436 _pdbx_refine_tls.S[2][1] 0.0197 _pdbx_refine_tls.S[3][1] 0.0561 _pdbx_refine_tls.S[3][2] -0.0531 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 284 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CIT C1 C N N 74 CIT O1 O N N 75 CIT O2 O N N 76 CIT C2 C N N 77 CIT C3 C N N 78 CIT O7 O N N 79 CIT C4 C N N 80 CIT C5 C N N 81 CIT O3 O N N 82 CIT O4 O N N 83 CIT C6 C N N 84 CIT O5 O N N 85 CIT O6 O N N 86 CIT HO2 H N N 87 CIT H21 H N N 88 CIT H22 H N N 89 CIT HO7 H N N 90 CIT H41 H N N 91 CIT H42 H N N 92 CIT HO4 H N N 93 CIT HO6 H N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 GLN N N N N 109 GLN CA C N S 110 GLN C C N N 111 GLN O O N N 112 GLN CB C N N 113 GLN CG C N N 114 GLN CD C N N 115 GLN OE1 O N N 116 GLN NE2 N N N 117 GLN OXT O N N 118 GLN H H N N 119 GLN H2 H N N 120 GLN HA H N N 121 GLN HB2 H N N 122 GLN HB3 H N N 123 GLN HG2 H N N 124 GLN HG3 H N N 125 GLN HE21 H N N 126 GLN HE22 H N N 127 GLN HXT H N N 128 GLU N N N N 129 GLU CA C N S 130 GLU C C N N 131 GLU O O N N 132 GLU CB C N N 133 GLU CG C N N 134 GLU CD C N N 135 GLU OE1 O N N 136 GLU OE2 O N N 137 GLU OXT O N N 138 GLU H H N N 139 GLU H2 H N N 140 GLU HA H N N 141 GLU HB2 H N N 142 GLU HB3 H N N 143 GLU HG2 H N N 144 GLU HG3 H N N 145 GLU HE2 H N N 146 GLU HXT H N N 147 GLY N N N N 148 GLY CA C N N 149 GLY C C N N 150 GLY O O N N 151 GLY OXT O N N 152 GLY H H N N 153 GLY H2 H N N 154 GLY HA2 H N N 155 GLY HA3 H N N 156 GLY HXT H N N 157 HIS N N N N 158 HIS CA C N S 159 HIS C C N N 160 HIS O O N N 161 HIS CB C N N 162 HIS CG C Y N 163 HIS ND1 N Y N 164 HIS CD2 C Y N 165 HIS CE1 C Y N 166 HIS NE2 N Y N 167 HIS OXT O N N 168 HIS H H N N 169 HIS H2 H N N 170 HIS HA H N N 171 HIS HB2 H N N 172 HIS HB3 H N N 173 HIS HD1 H N N 174 HIS HD2 H N N 175 HIS HE1 H N N 176 HIS HE2 H N N 177 HIS HXT H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MSE N N N N 251 MSE CA C N S 252 MSE C C N N 253 MSE O O N N 254 MSE OXT O N N 255 MSE CB C N N 256 MSE CG C N N 257 MSE SE SE N N 258 MSE CE C N N 259 MSE H H N N 260 MSE H2 H N N 261 MSE HA H N N 262 MSE HXT H N N 263 MSE HB2 H N N 264 MSE HB3 H N N 265 MSE HG2 H N N 266 MSE HG3 H N N 267 MSE HE1 H N N 268 MSE HE2 H N N 269 MSE HE3 H N N 270 PEG C1 C N N 271 PEG O1 O N N 272 PEG C2 C N N 273 PEG O2 O N N 274 PEG C3 C N N 275 PEG C4 C N N 276 PEG O4 O N N 277 PEG H11 H N N 278 PEG H12 H N N 279 PEG HO1 H N N 280 PEG H21 H N N 281 PEG H22 H N N 282 PEG H31 H N N 283 PEG H32 H N N 284 PEG H41 H N N 285 PEG H42 H N N 286 PEG HO4 H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PO4 P P N N 311 PO4 O1 O N N 312 PO4 O2 O N N 313 PO4 O3 O N N 314 PO4 O4 O N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CIT C1 O1 doub N N 70 CIT C1 O2 sing N N 71 CIT C1 C2 sing N N 72 CIT O2 HO2 sing N N 73 CIT C2 C3 sing N N 74 CIT C2 H21 sing N N 75 CIT C2 H22 sing N N 76 CIT C3 O7 sing N N 77 CIT C3 C4 sing N N 78 CIT C3 C6 sing N N 79 CIT O7 HO7 sing N N 80 CIT C4 C5 sing N N 81 CIT C4 H41 sing N N 82 CIT C4 H42 sing N N 83 CIT C5 O3 doub N N 84 CIT C5 O4 sing N N 85 CIT O4 HO4 sing N N 86 CIT C6 O5 doub N N 87 CIT C6 O6 sing N N 88 CIT O6 HO6 sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 GLN N CA sing N N 103 GLN N H sing N N 104 GLN N H2 sing N N 105 GLN CA C sing N N 106 GLN CA CB sing N N 107 GLN CA HA sing N N 108 GLN C O doub N N 109 GLN C OXT sing N N 110 GLN CB CG sing N N 111 GLN CB HB2 sing N N 112 GLN CB HB3 sing N N 113 GLN CG CD sing N N 114 GLN CG HG2 sing N N 115 GLN CG HG3 sing N N 116 GLN CD OE1 doub N N 117 GLN CD NE2 sing N N 118 GLN NE2 HE21 sing N N 119 GLN NE2 HE22 sing N N 120 GLN OXT HXT sing N N 121 GLU N CA sing N N 122 GLU N H sing N N 123 GLU N H2 sing N N 124 GLU CA C sing N N 125 GLU CA CB sing N N 126 GLU CA HA sing N N 127 GLU C O doub N N 128 GLU C OXT sing N N 129 GLU CB CG sing N N 130 GLU CB HB2 sing N N 131 GLU CB HB3 sing N N 132 GLU CG CD sing N N 133 GLU CG HG2 sing N N 134 GLU CG HG3 sing N N 135 GLU CD OE1 doub N N 136 GLU CD OE2 sing N N 137 GLU OE2 HE2 sing N N 138 GLU OXT HXT sing N N 139 GLY N CA sing N N 140 GLY N H sing N N 141 GLY N H2 sing N N 142 GLY CA C sing N N 143 GLY CA HA2 sing N N 144 GLY CA HA3 sing N N 145 GLY C O doub N N 146 GLY C OXT sing N N 147 GLY OXT HXT sing N N 148 HIS N CA sing N N 149 HIS N H sing N N 150 HIS N H2 sing N N 151 HIS CA C sing N N 152 HIS CA CB sing N N 153 HIS CA HA sing N N 154 HIS C O doub N N 155 HIS C OXT sing N N 156 HIS CB CG sing N N 157 HIS CB HB2 sing N N 158 HIS CB HB3 sing N N 159 HIS CG ND1 sing Y N 160 HIS CG CD2 doub Y N 161 HIS ND1 CE1 doub Y N 162 HIS ND1 HD1 sing N N 163 HIS CD2 NE2 sing Y N 164 HIS CD2 HD2 sing N N 165 HIS CE1 NE2 sing Y N 166 HIS CE1 HE1 sing N N 167 HIS NE2 HE2 sing N N 168 HIS OXT HXT sing N N 169 HOH O H1 sing N N 170 HOH O H2 sing N N 171 ILE N CA sing N N 172 ILE N H sing N N 173 ILE N H2 sing N N 174 ILE CA C sing N N 175 ILE CA CB sing N N 176 ILE CA HA sing N N 177 ILE C O doub N N 178 ILE C OXT sing N N 179 ILE CB CG1 sing N N 180 ILE CB CG2 sing N N 181 ILE CB HB sing N N 182 ILE CG1 CD1 sing N N 183 ILE CG1 HG12 sing N N 184 ILE CG1 HG13 sing N N 185 ILE CG2 HG21 sing N N 186 ILE CG2 HG22 sing N N 187 ILE CG2 HG23 sing N N 188 ILE CD1 HD11 sing N N 189 ILE CD1 HD12 sing N N 190 ILE CD1 HD13 sing N N 191 ILE OXT HXT sing N N 192 LEU N CA sing N N 193 LEU N H sing N N 194 LEU N H2 sing N N 195 LEU CA C sing N N 196 LEU CA CB sing N N 197 LEU CA HA sing N N 198 LEU C O doub N N 199 LEU C OXT sing N N 200 LEU CB CG sing N N 201 LEU CB HB2 sing N N 202 LEU CB HB3 sing N N 203 LEU CG CD1 sing N N 204 LEU CG CD2 sing N N 205 LEU CG HG sing N N 206 LEU CD1 HD11 sing N N 207 LEU CD1 HD12 sing N N 208 LEU CD1 HD13 sing N N 209 LEU CD2 HD21 sing N N 210 LEU CD2 HD22 sing N N 211 LEU CD2 HD23 sing N N 212 LEU OXT HXT sing N N 213 LYS N CA sing N N 214 LYS N H sing N N 215 LYS N H2 sing N N 216 LYS CA C sing N N 217 LYS CA CB sing N N 218 LYS CA HA sing N N 219 LYS C O doub N N 220 LYS C OXT sing N N 221 LYS CB CG sing N N 222 LYS CB HB2 sing N N 223 LYS CB HB3 sing N N 224 LYS CG CD sing N N 225 LYS CG HG2 sing N N 226 LYS CG HG3 sing N N 227 LYS CD CE sing N N 228 LYS CD HD2 sing N N 229 LYS CD HD3 sing N N 230 LYS CE NZ sing N N 231 LYS CE HE2 sing N N 232 LYS CE HE3 sing N N 233 LYS NZ HZ1 sing N N 234 LYS NZ HZ2 sing N N 235 LYS NZ HZ3 sing N N 236 LYS OXT HXT sing N N 237 MSE N CA sing N N 238 MSE N H sing N N 239 MSE N H2 sing N N 240 MSE CA C sing N N 241 MSE CA CB sing N N 242 MSE CA HA sing N N 243 MSE C O doub N N 244 MSE C OXT sing N N 245 MSE OXT HXT sing N N 246 MSE CB CG sing N N 247 MSE CB HB2 sing N N 248 MSE CB HB3 sing N N 249 MSE CG SE sing N N 250 MSE CG HG2 sing N N 251 MSE CG HG3 sing N N 252 MSE SE CE sing N N 253 MSE CE HE1 sing N N 254 MSE CE HE2 sing N N 255 MSE CE HE3 sing N N 256 PEG C1 O1 sing N N 257 PEG C1 C2 sing N N 258 PEG C1 H11 sing N N 259 PEG C1 H12 sing N N 260 PEG O1 HO1 sing N N 261 PEG C2 O2 sing N N 262 PEG C2 H21 sing N N 263 PEG C2 H22 sing N N 264 PEG O2 C3 sing N N 265 PEG C3 C4 sing N N 266 PEG C3 H31 sing N N 267 PEG C3 H32 sing N N 268 PEG C4 O4 sing N N 269 PEG C4 H41 sing N N 270 PEG C4 H42 sing N N 271 PEG O4 HO4 sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PO4 P O1 doub N N 296 PO4 P O2 sing N N 297 PO4 P O3 sing N N 298 PO4 P O4 sing N N 299 PRO N CA sing N N 300 PRO N CD sing N N 301 PRO N H sing N N 302 PRO CA C sing N N 303 PRO CA CB sing N N 304 PRO CA HA sing N N 305 PRO C O doub N N 306 PRO C OXT sing N N 307 PRO CB CG sing N N 308 PRO CB HB2 sing N N 309 PRO CB HB3 sing N N 310 PRO CG CD sing N N 311 PRO CG HG2 sing N N 312 PRO CG HG3 sing N N 313 PRO CD HD2 sing N N 314 PRO CD HD3 sing N N 315 PRO OXT HXT sing N N 316 SER N CA sing N N 317 SER N H sing N N 318 SER N H2 sing N N 319 SER CA C sing N N 320 SER CA CB sing N N 321 SER CA HA sing N N 322 SER C O doub N N 323 SER C OXT sing N N 324 SER CB OG sing N N 325 SER CB HB2 sing N N 326 SER CB HB3 sing N N 327 SER OG HG sing N N 328 SER OXT HXT sing N N 329 THR N CA sing N N 330 THR N H sing N N 331 THR N H2 sing N N 332 THR CA C sing N N 333 THR CA CB sing N N 334 THR CA HA sing N N 335 THR C O doub N N 336 THR C OXT sing N N 337 THR CB OG1 sing N N 338 THR CB CG2 sing N N 339 THR CB HB sing N N 340 THR OG1 HG1 sing N N 341 THR CG2 HG21 sing N N 342 THR CG2 HG22 sing N N 343 THR CG2 HG23 sing N N 344 THR OXT HXT sing N N 345 TRP N CA sing N N 346 TRP N H sing N N 347 TRP N H2 sing N N 348 TRP CA C sing N N 349 TRP CA CB sing N N 350 TRP CA HA sing N N 351 TRP C O doub N N 352 TRP C OXT sing N N 353 TRP CB CG sing N N 354 TRP CB HB2 sing N N 355 TRP CB HB3 sing N N 356 TRP CG CD1 doub Y N 357 TRP CG CD2 sing Y N 358 TRP CD1 NE1 sing Y N 359 TRP CD1 HD1 sing N N 360 TRP CD2 CE2 doub Y N 361 TRP CD2 CE3 sing Y N 362 TRP NE1 CE2 sing Y N 363 TRP NE1 HE1 sing N N 364 TRP CE2 CZ2 sing Y N 365 TRP CE3 CZ3 doub Y N 366 TRP CE3 HE3 sing N N 367 TRP CZ2 CH2 doub Y N 368 TRP CZ2 HZ2 sing N N 369 TRP CZ3 CH2 sing Y N 370 TRP CZ3 HZ3 sing N N 371 TRP CH2 HH2 sing N N 372 TRP OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 # _atom_sites.entry_id 3P6L _atom_sites.fract_transf_matrix[1][1] 0.012138 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002965 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013696 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021656 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S SE # loop_