HEADER DE NOVO PROTEIN 20-OCT-10 3PBJ TITLE HYDROLYTIC CATALYSIS AND STRUCTURAL STABILIZATION IN A DESIGNED TITLE 2 METALLOPROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: COIL SER L9L-PEN L23H; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ARTIFICIAL GENE; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DE NOVO PROTEIN, PARALLEL THREE-STRANDED COILED COIL, MERCURY(II) KEYWDS 2 BINDING PROTEIN, ZINC(II) BINDING PROTEIN, L-PENICILLAMINE EXPDTA X-RAY DIFFRACTION AUTHOR M.L.ZASTROW,A.F.A.PEACOCK,J.A.STUCKEY,V.L.PECORARO REVDAT 5 04-MAY-22 3PBJ 1 REMARK HETSYN LINK REVDAT 4 08-NOV-17 3PBJ 1 REMARK REVDAT 3 29-FEB-12 3PBJ 1 JRNL REVDAT 2 14-DEC-11 3PBJ 1 JRNL REVDAT 1 30-NOV-11 3PBJ 0 JRNL AUTH M.L.ZASTROW,A.F.PEACOCK,J.A.STUCKEY,V.L.PECORARO JRNL TITL HYDROLYTIC CATALYSIS AND STRUCTURAL STABILIZATION IN A JRNL TITL 2 DESIGNED METALLOPROTEIN. JRNL REF NAT CHEM V. 4 118 2012 JRNL REFN ESSN 1755-4349 JRNL PMID 22270627 JRNL DOI 10.1038/NCHEM.1201 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 7625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.540 REMARK 3 FREE R VALUE TEST SET COUNT : 346 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.54 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2120 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2369 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2029 REMARK 3 BIN R VALUE (WORKING SET) : 0.2321 REMARK 3 BIN FREE R VALUE : 0.3412 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.29 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 91 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1353 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 66 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32690 REMARK 3 B22 (A**2) : 0.46940 REMARK 3 B33 (A**2) : -0.14240 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.17330 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.388 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1375 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1850 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 657 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 42 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 187 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1375 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 9 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 175 ; 5.000 ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1558 ; 4.000 ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.73 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A,B,C REMARK 3 ORIGIN FOR THE GROUP (A): 6.0293 -1.1204 0.6697 REMARK 3 T TENSOR REMARK 3 T11: -0.0872 T22: -0.0932 REMARK 3 T33: 0.0192 T12: 0.0224 REMARK 3 T13: -0.0441 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.5769 L22: 1.8932 REMARK 3 L33: 5.8482 L12: 1.1775 REMARK 3 L13: -1.9036 L23: -1.6875 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: -0.0488 S13: 0.2442 REMARK 3 S21: 0.2596 S22: 0.0209 S23: -0.0218 REMARK 3 S31: 0.1074 S32: 0.2149 S33: -0.0037 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN D,E,F REMARK 3 ORIGIN FOR THE GROUP (A): 16.7945 0.6601 37.4903 REMARK 3 T TENSOR REMARK 3 T11: -0.1069 T22: 0.0329 REMARK 3 T33: -0.0997 T12: 0.0404 REMARK 3 T13: -0.0219 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.3650 L22: 1.8802 REMARK 3 L33: 6.1754 L12: -0.0400 REMARK 3 L13: -3.2965 L23: 1.4445 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: 0.4150 S13: -0.1017 REMARK 3 S21: -0.2418 S22: -0.1054 S23: -0.0375 REMARK 3 S31: -0.0660 S32: -0.5096 S33: 0.0808 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PBJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062189. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : C(111) CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7625 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32100 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM NACL, 28% PEG 8000, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.32450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -298.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 19.20396 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 75.36415 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 0 REMARK 465 NH2 A 30 REMARK 465 GLY B 29 REMARK 465 NH2 B 30 REMARK 465 NH2 C 30 REMARK 465 NH2 F 30 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 LEU A 26 CD2 REMARK 470 GLY A 29 C O REMARK 470 LYS B 21 CG CD CE NZ REMARK 470 LEU B 26 CG CD1 CD2 REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 HIS B 28 CG ND1 CD2 CE1 NE2 REMARK 470 HIS C 28 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 20 OE2 REMARK 470 GLU E 6 CG CD OE1 OE2 REMARK 470 LYS E 7 CG CD CE NZ REMARK 470 LYS E 21 CG CD CE NZ REMARK 470 LYS E 22 CG CD CE NZ REMARK 470 GLU E 24 CG CD OE1 OE2 REMARK 470 LEU E 26 CG CD1 CD2 REMARK 470 HIS E 28 CG ND1 CD2 CE1 NE2 REMARK 470 GLU F 24 CG CD OE1 OE2 REMARK 470 GLY F 29 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS C 7 O HIS F 28 2645 1.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS C 28 26.92 105.15 REMARK 500 GLU D 27 -115.80 -87.36 REMARK 500 HIS F 28 -64.30 -20.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 32 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 6 OE2 REMARK 620 2 GLU C 1 OE2 142.3 REMARK 620 3 GLU C 1 OE1 138.9 49.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 31 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 23 NE2 REMARK 620 2 HIS B 23 ND1 115.7 REMARK 620 3 HIS C 23 NE2 95.5 125.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 32 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 6 OE2 REMARK 620 2 GLU F 1 OE1 152.8 REMARK 620 3 HOH F 66 O 108.8 98.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 31 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 23 NE2 REMARK 620 2 HIS E 23 NE2 101.8 REMARK 620 3 HIS F 23 NE2 93.3 114.5 REMARK 620 4 HOH F 32 O 129.0 111.3 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 31 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 1 OE1 REMARK 620 2 GLU F 6 OE2 94.4 REMARK 620 3 HOH F 37 O 129.4 108.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 31 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU F 3 OE2 REMARK 620 2 GLU F 3 OE1 58.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 34 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG D 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN F 31 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H5F RELATED DB: PDB REMARK 900 COIL SER L16L-PEN REMARK 900 RELATED ID: 3H5G RELATED DB: PDB REMARK 900 COIL SER L16D-PEN REMARK 900 RELATED ID: 2JGO RELATED DB: PDB REMARK 900 ARSENATED COIL SER L9C REMARK 900 RELATED ID: 3LJM RELATED DB: PDB REMARK 900 COIL SER L9C REMARK 900 RELATED ID: 2X6P RELATED DB: PDB REMARK 900 COIL SER L19C DBREF 3PBJ A 0 30 PDB 3PBJ 3PBJ 0 30 DBREF 3PBJ B 0 30 PDB 3PBJ 3PBJ 0 30 DBREF 3PBJ C 0 30 PDB 3PBJ 3PBJ 0 30 DBREF 3PBJ D 0 30 PDB 3PBJ 3PBJ 0 30 DBREF 3PBJ E 0 30 PDB 3PBJ 3PBJ 0 30 DBREF 3PBJ F 0 30 PDB 3PBJ 3PBJ 0 30 SEQRES 1 A 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 A 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 A 31 LEU GLU HIS GLY NH2 SEQRES 1 B 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 B 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 B 31 LEU GLU HIS GLY NH2 SEQRES 1 C 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 C 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 C 31 LEU GLU HIS GLY NH2 SEQRES 1 D 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 D 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 D 31 LEU GLU HIS GLY NH2 SEQRES 1 E 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 E 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 E 31 LEU GLU HIS GLY NH2 SEQRES 1 F 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LE1 ALA ALA LEU SEQRES 2 F 31 GLU SER LYS LEU GLN ALA LEU GLU LYS LYS HIS GLU ALA SEQRES 3 F 31 LEU GLU HIS GLY NH2 MODRES 3PBJ LE1 A 9 VAL 3-SULFANYL-L-VALINE MODRES 3PBJ LE1 B 9 VAL 3-SULFANYL-L-VALINE MODRES 3PBJ LE1 C 9 VAL 3-SULFANYL-L-VALINE MODRES 3PBJ LE1 D 9 VAL 3-SULFANYL-L-VALINE MODRES 3PBJ LE1 E 9 VAL 3-SULFANYL-L-VALINE MODRES 3PBJ LE1 F 9 VAL 3-SULFANYL-L-VALINE HET LE1 A 9 8 HET ACE B 0 3 HET LE1 B 9 8 HET ACE C 0 3 HET LE1 C 9 8 HET ACE D 0 2 HET LE1 D 9 8 HET NH2 D 30 1 HET ACE E 0 3 HET LE1 E 9 8 HET NH2 E 30 1 HET ACE F 0 3 HET LE1 F 9 8 HET ZN A 31 1 HET ZN A 32 1 HET ZN A 33 1 HET CL A 34 1 HET HG B 31 1 HET NA B 32 1 HET ZN D 31 1 HET ZN D 32 1 HET HG D 33 1 HET ZN E 31 1 HET CL E 32 1 HET CL E 33 1 HET ZN F 31 1 HETNAM LE1 3-SULFANYL-L-VALINE HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM HG MERCURY (II) ION HETNAM NA SODIUM ION HETSYN LE1 L-LE1ICILLAMINE; L-PENICILLAMINE FORMUL 1 LE1 6(C5 H11 N O2 S) FORMUL 2 ACE 5(C2 H4 O) FORMUL 4 NH2 2(H2 N) FORMUL 7 ZN 7(ZN 2+) FORMUL 10 CL 3(CL 1-) FORMUL 11 HG 2(HG 2+) FORMUL 12 NA NA 1+ FORMUL 20 HOH *66(H2 O) HELIX 1 1 GLU A 1 GLY A 29 1 29 HELIX 2 2 GLU B 1 GLU B 27 1 27 HELIX 3 3 GLU C 1 GLU C 27 1 27 HELIX 4 4 GLU D 1 GLU D 27 1 27 HELIX 5 5 GLU E 1 LYS E 22 1 22 HELIX 6 6 GLU F 1 LEU F 26 1 26 LINK C LYS A 8 N LE1 A 9 1555 1555 1.32 LINK C LE1 A 9 N ALA A 10 1555 1555 1.36 LINK C ACE B 0 N GLU B 1 1555 1555 1.34 LINK C LYS B 8 N LE1 B 9 1555 1555 1.31 LINK C LE1 B 9 N ALA B 10 1555 1555 1.35 LINK C ACE C 0 N GLU C 1 1555 1555 1.34 LINK C LYS C 8 N LE1 C 9 1555 1555 1.35 LINK C LE1 C 9 N ALA C 10 1555 1555 1.36 LINK C ACE D 0 N GLU D 1 1555 1555 1.33 LINK C LYS D 8 N LE1 D 9 1555 1555 1.33 LINK C LE1 D 9 N ALA D 10 1555 1555 1.36 LINK C GLY D 29 N NH2 D 30 1555 1555 1.34 LINK C ACE E 0 N GLU E 1 1555 1555 1.34 LINK C LYS E 8 N LE1 E 9 1555 1555 1.34 LINK C LE1 E 9 N ALA E 10 1555 1555 1.37 LINK C GLY E 29 N NH2 E 30 1555 1555 1.34 LINK C ACE F 0 N GLU F 1 1555 1555 1.33 LINK C LYS F 8 N LE1 F 9 1555 1555 1.35 LINK C LE1 F 9 N ALA F 10 1555 1555 1.36 LINK OE2 GLU A 6 ZN ZN A 32 1555 1555 2.50 LINK NE2 HIS A 23 ZN ZN A 31 1555 1555 1.94 LINK ZN ZN A 31 ND1 HIS B 23 1555 1555 1.92 LINK ZN ZN A 31 NE2 HIS C 23 1555 1555 1.92 LINK ZN ZN A 32 OE2 GLU C 1 1555 1555 2.62 LINK ZN ZN A 32 OE1 GLU C 1 1555 1555 2.69 LINK HG HG B 31 SG LE1 C 9 1555 1555 2.41 LINK OE2 GLU D 6 ZN ZN D 32 1555 1555 2.56 LINK NE2 HIS D 23 ZN ZN D 31 1555 1555 1.96 LINK ZN ZN D 31 NE2 HIS E 23 1555 1555 2.02 LINK ZN ZN D 31 NE2 HIS F 23 1555 1555 2.03 LINK ZN ZN D 31 O HOH F 32 1555 1555 2.18 LINK ZN ZN D 32 OE1 GLU F 1 1555 1555 1.94 LINK ZN ZN D 32 O HOH F 66 1555 1555 1.89 LINK HG HG D 33 SG LE1 F 9 1555 1555 3.06 LINK OE1 GLU E 1 ZN ZN E 31 1555 1555 1.99 LINK ZN ZN E 31 OE2 GLU F 6 1555 1555 2.09 LINK ZN ZN E 31 O HOH F 37 1555 1555 2.38 LINK OE2 GLU F 3 ZN ZN F 31 1555 1555 1.87 LINK OE1 GLU F 3 ZN ZN F 31 1555 1555 2.52 CISPEP 1 HIS D 28 GLY D 29 0 -9.45 SITE 1 AC1 4 HIS A 23 CL A 34 HIS B 23 HIS C 23 SITE 1 AC2 4 GLU A 6 HOH A 37 GLU C 1 HOH C 34 SITE 1 AC3 2 GLU A 1 HOH E 43 SITE 1 AC4 4 HIS A 23 ZN A 31 HIS B 23 HIS C 23 SITE 1 AC5 3 LE1 A 9 LE1 B 9 LE1 C 9 SITE 1 AC6 2 GLU B 27 CL E 33 SITE 1 AC7 4 HIS D 23 HIS E 23 HIS F 23 HOH F 32 SITE 1 AC8 3 GLU D 6 GLU F 1 HOH F 66 SITE 1 AC9 3 LE1 D 9 LE1 E 9 LE1 F 9 SITE 1 BC1 4 GLU E 1 CL E 32 GLU F 6 HOH F 37 SITE 1 BC2 1 ZN E 31 SITE 1 BC3 2 NA B 32 HIS E 28 SITE 1 BC4 3 GLU B 1 GLU C 6 GLU F 3 CRYST1 25.877 38.649 75.659 90.00 95.06 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038644 0.000000 0.003422 0.00000 SCALE2 0.000000 0.025874 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013269 0.00000