HEADER TRANSFERASE 24-OCT-10 3PDT TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL TRUNCATED ALPHA-KINASE DOMAIN OF TITLE 2 MYOSIN HEAVY CHAIN KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN HEAVY CHAIN KINASE A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 552-809; COMPND 5 SYNONYM: MHCK-A; COMPND 6 EC: 2.7.11.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_COMMON: SLIME MOLD; SOURCE 4 ORGANISM_TAXID: 44689; SOURCE 5 STRAIN: AX3; SOURCE 6 GENE: DDB_G0291231, MHCKA, MHKA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PROTEIN KINASE LIKE FOLD, PROTEIN KINASE, ATP BINDING, NUCLEOTIDE KEYWDS 2 BINDING, SERINE/THREONINE KINASE, ALPHA-KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.YE,Z.JIA REVDAT 5 06-SEP-23 3PDT 1 REMARK SEQADV LINK REVDAT 4 17-JUL-19 3PDT 1 REMARK REVDAT 3 09-FEB-11 3PDT 1 JRNL REVDAT 2 08-DEC-10 3PDT 1 JRNL REVDAT 1 10-NOV-10 3PDT 0 JRNL AUTH S.W.CRAWLEY,M.S.GHARAEI,Q.YE,Y.YANG,B.RAVEH,N.LONDON, JRNL AUTH 2 O.SCHUELER-FURMAN,Z.JIA,G.P.COTE JRNL TITL AUTOPHOSPHORYLATION ACTIVATES DICTYOSTELIUM MYOSIN II HEAVY JRNL TITL 2 CHAIN KINASE A BY PROVIDING A LIGAND FOR AN ALLOSTERIC JRNL TITL 3 BINDING SITE IN THE {ALPHA}-KINASE DOMAIN. JRNL REF J.BIOL.CHEM. V. 286 2607 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21071445 JRNL DOI 10.1074/JBC.M110.177014 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 25314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1332 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1672 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1995 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 299 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.759 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2070 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2798 ; 1.294 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 6.063 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;33.221 ;25.341 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 381 ;12.540 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.957 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 307 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1514 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1248 ; 0.701 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2022 ; 1.323 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 822 ; 1.919 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 776 ; 3.248 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9170 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SYNCHROTRON OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26646 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 3LKM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 8000, 0.2M SODIUM REMARK 280 PHOSPHATE,0.1M TRIS.HCL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.53100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.84050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.53100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.84050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 535 REMARK 465 GLY A 536 REMARK 465 GLY A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 GLY A 544 REMARK 465 GLU A 545 REMARK 465 ASN A 546 REMARK 465 LEU A 547 REMARK 465 TYR A 548 REMARK 465 PHE A 549 REMARK 465 GLN A 550 REMARK 465 GLY A 551 REMARK 465 ILE A 552 REMARK 465 SER A 553 REMARK 465 SER A 554 REMARK 465 GLU A 555 REMARK 465 THR A 614 REMARK 465 GLU A 650 REMARK 465 ALA A 651 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 713 O HOH A 129 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 612 -172.58 39.92 REMARK 500 ASN A 638 126.14 -33.92 REMARK 500 SER A 702 -128.39 44.34 REMARK 500 SER A 703 -141.66 63.39 REMARK 500 ASN A 704 -33.08 95.11 REMARK 500 TYR A 727 41.81 -146.34 REMARK 500 ASP A 761 -120.50 51.61 REMARK 500 ASP A 766 54.21 38.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 742 ND1 REMARK 620 2 HIS A 794 NE2 99.2 REMARK 620 3 CYS A 796 SG 103.1 109.0 REMARK 620 4 CYS A 800 SG 118.5 108.0 117.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 2 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 24 O REMARK 620 2 HOH A 68 O 154.3 REMARK 620 3 ASP A 766 OD1 74.7 91.2 REMARK 620 4 PRO A 767 O 79.2 122.3 87.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 73 O REMARK 620 2 HOH A 213 O 142.1 REMARK 620 3 GLY A 776 O 87.4 126.0 REMARK 620 4 GLY A 778 O 83.8 81.7 86.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 810 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 811 REMARK 999 REMARK 999 SEQUENCE REMARK 999 TEV PROTEASE CUT SITE DBREF 3PDT A 552 809 UNP P42527 MHCKA_DICDI 552 809 SEQADV 3PDT MET A 535 UNP P42527 EXPRESSION TAG SEQADV 3PDT GLY A 536 UNP P42527 EXPRESSION TAG SEQADV 3PDT GLY A 537 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 538 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 539 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 540 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 541 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 542 UNP P42527 EXPRESSION TAG SEQADV 3PDT HIS A 543 UNP P42527 EXPRESSION TAG SEQADV 3PDT GLY A 544 UNP P42527 EXPRESSION TAG SEQADV 3PDT GLU A 545 UNP P42527 SEE REMARK 999 SEQADV 3PDT ASN A 546 UNP P42527 SEE REMARK 999 SEQADV 3PDT LEU A 547 UNP P42527 SEE REMARK 999 SEQADV 3PDT TYR A 548 UNP P42527 SEE REMARK 999 SEQADV 3PDT PHE A 549 UNP P42527 SEE REMARK 999 SEQADV 3PDT GLN A 550 UNP P42527 SEE REMARK 999 SEQADV 3PDT GLY A 551 UNP P42527 SEE REMARK 999 SEQRES 1 A 275 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU SEQRES 2 A 275 TYR PHE GLN GLY ILE SER SER GLU THR GLY GLU MET GLY SEQRES 3 A 275 ILE LEU TRP GLU PHE ASP PRO ILE ILE ASN LYS TRP ILE SEQRES 4 A 275 ARG LEU SER MET LYS LEU LYS VAL GLU ARG LYS PRO PHE SEQRES 5 A 275 ALA GLU GLY ALA LEU ARG GLU ALA TYR HIS THR VAL SER SEQRES 6 A 275 LEU GLY VAL GLY THR ASP GLU ASN TYR PRO LEU GLY THR SEQRES 7 A 275 THR THR LYS LEU PHE PRO PRO ILE GLU MET ILE SER PRO SEQRES 8 A 275 ILE SER LYS ASN ASN GLU ALA MET THR GLN LEU LYS ASN SEQRES 9 A 275 GLY THR LYS PHE VAL LEU LYS LEU TYR LYS LYS GLU ALA SEQRES 10 A 275 GLU GLN GLN ALA SER ARG GLU LEU TYR PHE GLU ASP VAL SEQRES 11 A 275 LYS MET GLN MET VAL CYS ARG ASP TRP GLY ASN LYS PHE SEQRES 12 A 275 ASN GLN LYS LYS PRO PRO LYS LYS ILE GLU PHE LEU MET SEQRES 13 A 275 SER TRP VAL VAL GLU LEU ILE ASP ARG SER PRO SER SER SEQRES 14 A 275 ASN GLY GLN PRO ILE LEU CYS SER ILE GLU PRO LEU LEU SEQRES 15 A 275 VAL GLY GLU PHE LYS LYS ASN ASN SER ASN TYR GLY ALA SEQRES 16 A 275 VAL LEU THR ASN ARG SER THR PRO GLN ALA PHE SER HIS SEQRES 17 A 275 PHE THR TYR GLU LEU SER ASN LYS GLN MET ILE VAL VAL SEQRES 18 A 275 ASP ILE GLN GLY VAL ASP ASP LEU TYR THR ASP PRO GLN SEQRES 19 A 275 ILE HIS THR PRO ASP GLY LYS GLY PHE GLY LEU GLY ASN SEQRES 20 A 275 LEU GLY LYS ALA GLY ILE ASN LYS PHE ILE THR THR HIS SEQRES 21 A 275 LYS CYS ASN ALA VAL CYS ALA LEU LEU ASP LEU ASP VAL SEQRES 22 A 275 LYS LEU HET MG A 2 1 HET MG A 3 1 HET ZN A 1 1 HET PO4 A 810 5 HET ADP A 811 27 HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 MG 2(MG 2+) FORMUL 4 ZN ZN 2+ FORMUL 5 PO4 O4 P 3- FORMUL 6 ADP C10 H15 N5 O10 P2 FORMUL 7 HOH *299(H2 O) HELIX 1 1 PRO A 619 ILE A 623 5 5 HELIX 2 2 GLU A 631 LEU A 636 1 6 HELIX 3 3 SER A 656 LYS A 680 1 25 HELIX 4 4 ARG A 734 SER A 748 1 15 HELIX 5 5 LEU A 782 HIS A 794 1 13 HELIX 6 6 ASN A 797 LEU A 803 1 7 SHEET 1 A 8 ALA A 587 GLU A 588 0 SHEET 2 A 8 ARG A 592 THR A 604 -1 O ALA A 594 N ALA A 587 SHEET 3 A 8 LYS A 641 TYR A 647 -1 O LEU A 644 N TYR A 595 SHEET 4 A 8 LEU A 709 PRO A 714 -1 O SER A 711 N LYS A 645 SHEET 5 A 8 TRP A 692 GLU A 695 -1 N TRP A 692 O ILE A 712 SHEET 6 A 8 GLU A 558 ASP A 566 -1 N TRP A 563 O VAL A 693 SHEET 7 A 8 LYS A 571 VAL A 581 -1 O ILE A 573 N GLU A 564 SHEET 8 A 8 ARG A 592 THR A 604 -1 O GLY A 603 N SER A 576 SHEET 1 B 4 GLU A 687 PHE A 688 0 SHEET 2 B 4 LEU A 763 TYR A 764 1 O TYR A 764 N GLU A 687 SHEET 3 B 4 GLN A 758 VAL A 760 -1 N VAL A 760 O LEU A 763 SHEET 4 B 4 LYS A 721 LYS A 722 -1 N LYS A 721 O GLY A 759 SHEET 1 C 2 ILE A 753 VAL A 755 0 SHEET 2 C 2 GLN A 768 HIS A 770 -1 O GLN A 768 N VAL A 755 LINK ZN ZN A 1 ND1 HIS A 742 1555 1555 2.14 LINK ZN ZN A 1 NE2 HIS A 794 1555 1555 2.11 LINK ZN ZN A 1 SG CYS A 796 1555 1555 2.33 LINK ZN ZN A 1 SG CYS A 800 1555 1555 2.28 LINK MG MG A 2 O HOH A 24 1555 1555 2.69 LINK MG MG A 2 O HOH A 68 1555 1555 2.87 LINK MG MG A 2 OD1 ASP A 766 1555 1555 2.60 LINK MG MG A 2 O PRO A 767 1555 1555 2.81 LINK MG MG A 3 O HOH A 73 1555 1555 2.82 LINK MG MG A 3 O HOH A 213 1555 1555 2.72 LINK MG MG A 3 O GLY A 776 1555 1555 2.70 LINK MG MG A 3 O GLY A 778 1555 1555 2.78 CISPEP 1 PHE A 617 PRO A 618 0 1.65 CISPEP 2 SER A 703 ASN A 704 0 -5.34 SITE 1 AC1 6 HOH A 24 HOH A 68 MET A 666 ASP A 766 SITE 2 AC1 6 PRO A 767 GLN A 768 SITE 1 AC2 5 HOH A 73 HOH A 213 GLY A 774 GLY A 776 SITE 2 AC2 5 GLY A 778 SITE 1 AC3 4 HIS A 742 HIS A 794 CYS A 796 CYS A 800 SITE 1 AC4 8 HOH A 106 HOH A 146 HOH A 159 HOH A 288 SITE 2 AC4 8 LYS A 684 ARG A 734 SER A 735 THR A 736 SITE 1 AC5 19 HOH A 13 HOH A 29 HOH A 170 HOH A 193 SITE 2 AC5 19 HOH A 267 PHE A 586 ALA A 587 GLU A 588 SITE 3 AC5 19 GLY A 589 ALA A 590 ARG A 592 LYS A 645 SITE 4 AC5 19 LEU A 689 PRO A 714 LEU A 716 PHE A 720 SITE 5 AC5 19 GLN A 758 THR A 765 ASP A 766 CRYST1 77.062 83.681 44.684 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012977 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011950 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022379 0.00000