HEADER TRANSFERASE/TRANSFERASE INHIBITOR 25-OCT-10 3PE1 TITLE CRYSTAL STRUCTURE OF HUMAN PROTEIN KINASE CK2 ALPHA SUBUNIT IN COMPLEX TITLE 2 WITH THE INHIBITOR CX-4945 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-337; COMPND 5 SYNONYM: CK II ALPHA; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSNK2A1, CK2A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS KINASE, CK2-INHIBITOR COMPLEX, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.BATTISTUTTA,E.PAPINUTTO,G.LOLLI,F.PIERRE,M.HADDACH,D.M.RYCKMAN REVDAT 3 06-SEP-23 3PE1 1 REMARK REVDAT 2 04-JAN-12 3PE1 1 JRNL REVDAT 1 07-SEP-11 3PE1 0 JRNL AUTH R.BATTISTUTTA,G.COZZA,F.PIERRE,E.PAPINUTTO,G.LOLLI,S.SARNO, JRNL AUTH 2 S.E.O'BRIEN,A.SIDDIQUI-JAIN,M.HADDACH,K.ANDERES,D.M.RYCKMAN, JRNL AUTH 3 F.MEGGIO,L.A.PINNA JRNL TITL UNPRECEDENTED SELECTIVITY AND STRUCTURAL DETERMINANTS OF A JRNL TITL 2 NEW CLASS OF PROTEIN KINASE CK2 INHIBITORS IN CLINICAL JRNL TITL 3 TRIALS FOR THE TREATMENT OF CANCER. JRNL REF BIOCHEMISTRY V. 50 8478 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21870818 JRNL DOI 10.1021/BI2008382 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.COZZA,M.MAZZORANA,E.PAPINUTTO,J.BAIN,M.ELLIOTT,G.DI MAIRA, REMARK 1 AUTH 2 A.GIANONCELLI,M.A.PAGANO,S.SARNO,M.RUZZENE,R.BATTISTUTTA, REMARK 1 AUTH 3 F.MEGGIO,S.MORO,G.ZAGOTTO,L.A.PINNA REMARK 1 TITL QUINALIZARIN AS A POTENT, SELECTIVE AND CELL-PERMEABLE REMARK 1 TITL 2 INHIBITOR OF PROTEIN KINASE CK2. REMARK 1 REF BIOCHEM.J. V. 421 387 2009 REMARK 1 REFN ISSN 0264-6021 REMARK 1 PMID 19432557 REMARK 1 DOI 10.1042/BJ20090069 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 41165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2092 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.2057 - 3.4431 1.00 4056 228 0.1437 0.1745 REMARK 3 2 3.4431 - 2.7334 1.00 3974 227 0.1592 0.2009 REMARK 3 3 2.7334 - 2.3880 0.99 3978 202 0.1629 0.2027 REMARK 3 4 2.3880 - 2.1697 1.00 3931 227 0.1570 0.2029 REMARK 3 5 2.1697 - 2.0143 1.00 3933 198 0.1516 0.1848 REMARK 3 6 2.0143 - 1.8955 1.00 4052 175 0.1567 0.2046 REMARK 3 7 1.8955 - 1.8006 0.97 3811 203 0.1753 0.2447 REMARK 3 8 1.8006 - 1.7222 0.99 3905 209 0.1952 0.2741 REMARK 3 9 1.7222 - 1.6559 1.00 3931 220 0.2060 0.2625 REMARK 3 10 1.6559 - 1.5988 0.97 3807 203 0.2221 0.2796 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 34.25 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.28770 REMARK 3 B22 (A**2) : 4.83620 REMARK 3 B33 (A**2) : 0.45150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.30240 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2896 REMARK 3 ANGLE : 0.987 3924 REMARK 3 CHIRALITY : 0.074 402 REMARK 3 PLANARITY : 0.005 500 REMARK 3 DIHEDRAL : 13.732 1095 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:14) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0910 -54.5604 14.0828 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.1638 REMARK 3 T33: 0.2700 T12: -0.0226 REMARK 3 T13: 0.0600 T23: -0.0618 REMARK 3 L TENSOR REMARK 3 L11: 0.1150 L22: 0.0821 REMARK 3 L33: 0.0613 L12: 0.1019 REMARK 3 L13: -0.0401 L23: 0.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.2742 S12: 0.2822 S13: -0.3905 REMARK 3 S21: 0.0840 S22: 0.1448 S23: -0.2045 REMARK 3 S31: 0.0094 S32: -0.2462 S33: 0.0011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 15:32) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7729 -55.0242 9.1839 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.2387 REMARK 3 T33: 0.3933 T12: 0.0342 REMARK 3 T13: 0.0282 T23: -0.1590 REMARK 3 L TENSOR REMARK 3 L11: 0.0576 L22: 0.0708 REMARK 3 L33: 0.1962 L12: 0.0324 REMARK 3 L13: 0.0956 L23: -0.0292 REMARK 3 S TENSOR REMARK 3 S11: -0.2541 S12: 0.3196 S13: -0.3054 REMARK 3 S21: -0.1317 S22: 0.1872 S23: -0.3732 REMARK 3 S31: 0.0731 S32: 0.1017 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 33:74) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2796 -32.2342 14.4244 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.1873 REMARK 3 T33: 0.1791 T12: -0.0221 REMARK 3 T13: -0.0042 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 0.8615 L22: 0.7464 REMARK 3 L33: 0.6063 L12: -0.0415 REMARK 3 L13: 0.4026 L23: 0.5708 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: 0.1145 S13: -0.0262 REMARK 3 S21: 0.0139 S22: -0.1465 S23: 0.1183 REMARK 3 S31: 0.0049 S32: 0.1455 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 75:118) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7866 -39.8465 11.7627 REMARK 3 T TENSOR REMARK 3 T11: 0.1099 T22: 0.1549 REMARK 3 T33: 0.1754 T12: -0.0046 REMARK 3 T13: -0.0083 T23: -0.0554 REMARK 3 L TENSOR REMARK 3 L11: 0.6802 L22: 0.3607 REMARK 3 L33: 0.3293 L12: 0.4186 REMARK 3 L13: 0.0375 L23: 0.2862 REMARK 3 S TENSOR REMARK 3 S11: -0.0473 S12: 0.1309 S13: -0.1055 REMARK 3 S21: 0.0393 S22: 0.0197 S23: -0.1615 REMARK 3 S31: 0.0198 S32: 0.0974 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 119:153) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0620 -30.6189 8.0278 REMARK 3 T TENSOR REMARK 3 T11: 0.0752 T22: 0.1546 REMARK 3 T33: 0.0725 T12: 0.0185 REMARK 3 T13: -0.0135 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 0.7894 L22: 0.6322 REMARK 3 L33: 0.2346 L12: -0.2964 REMARK 3 L13: -0.1616 L23: -0.6680 REMARK 3 S TENSOR REMARK 3 S11: -0.1367 S12: 0.2385 S13: 0.0902 REMARK 3 S21: 0.1547 S22: 0.1765 S23: -0.2533 REMARK 3 S31: -0.0297 S32: -0.2019 S33: 0.0020 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 154:224) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9849 -39.2688 16.8877 REMARK 3 T TENSOR REMARK 3 T11: 0.1147 T22: 0.0825 REMARK 3 T33: 0.1139 T12: 0.0066 REMARK 3 T13: -0.0089 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 0.9760 L22: 0.2103 REMARK 3 L33: 0.2583 L12: -0.0513 REMARK 3 L13: -0.3760 L23: -0.2614 REMARK 3 S TENSOR REMARK 3 S11: -0.0444 S12: 0.1130 S13: -0.0794 REMARK 3 S21: 0.0272 S22: 0.0196 S23: -0.0624 REMARK 3 S31: -0.0088 S32: -0.0024 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 225:269) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4746 -38.0757 27.8991 REMARK 3 T TENSOR REMARK 3 T11: 0.1665 T22: 0.0885 REMARK 3 T33: 0.0969 T12: 0.0081 REMARK 3 T13: -0.0091 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.7595 L22: 0.3958 REMARK 3 L33: 0.7272 L12: -0.5496 REMARK 3 L13: -0.1860 L23: -0.2180 REMARK 3 S TENSOR REMARK 3 S11: -0.0966 S12: -0.0235 S13: 0.0068 REMARK 3 S21: 0.1857 S22: 0.0129 S23: -0.0357 REMARK 3 S31: -0.0359 S32: -0.0489 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 270:282) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5540 -34.8628 28.7324 REMARK 3 T TENSOR REMARK 3 T11: 0.2065 T22: 0.1569 REMARK 3 T33: 0.1356 T12: 0.0344 REMARK 3 T13: 0.0171 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.2218 L22: 0.2927 REMARK 3 L33: 0.1560 L12: -0.0781 REMARK 3 L13: -0.0359 L23: 0.2287 REMARK 3 S TENSOR REMARK 3 S11: -0.1282 S12: 0.0365 S13: 0.0077 REMARK 3 S21: 0.0952 S22: 0.0353 S23: 0.1582 REMARK 3 S31: 0.1109 S32: 0.0336 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 283:329) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3882 -32.5090 10.1389 REMARK 3 T TENSOR REMARK 3 T11: 0.0966 T22: 0.1662 REMARK 3 T33: 0.0877 T12: 0.0019 REMARK 3 T13: 0.0011 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.5930 L22: 0.7474 REMARK 3 L33: 0.5468 L12: -0.0802 REMARK 3 L13: -0.1080 L23: -0.1131 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.2468 S13: -0.0085 REMARK 3 S21: 0.0366 S22: 0.0115 S23: 0.1122 REMARK 3 S31: -0.0101 S32: -0.1825 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PE1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41165 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 46.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.46600 REMARK 200 R SYM FOR SHELL (I) : 0.46600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PVR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 4000, 0.2M LI2SO4, 0.1M TRIS, REMARK 280 PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.04350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 330 REMARK 465 GLN A 331 REMARK 465 ALA A 332 REMARK 465 ARG A 333 REMARK 465 MET A 334 REMARK 465 GLY A 335 REMARK 465 SER A 336 REMARK 465 SER A 337 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 72 60.87 -66.69 REMARK 500 LYS A 74 72.41 55.88 REMARK 500 ASP A 156 42.61 -146.70 REMARK 500 ASP A 175 77.23 50.32 REMARK 500 ALA A 193 159.47 65.07 REMARK 500 HIS A 234 71.40 -107.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3NG A 338 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 339 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 341 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FL5 RELATED DB: PDB REMARK 900 PROTEIN KINASE CK2 IN COMPLEX WITH THE INHIBITOR QUINALIZARIN REMARK 900 RELATED ID: 3PE2 RELATED DB: PDB DBREF 3PE1 A 1 337 UNP P68400 CSK21_HUMAN 1 337 SEQRES 1 A 337 MET SER GLY PRO VAL PRO SER ARG ALA ARG VAL TYR THR SEQRES 2 A 337 ASP VAL ASN THR HIS ARG PRO ARG GLU TYR TRP ASP TYR SEQRES 3 A 337 GLU SER HIS VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR SEQRES 4 A 337 GLN LEU VAL ARG LYS LEU GLY ARG GLY LYS TYR SER GLU SEQRES 5 A 337 VAL PHE GLU ALA ILE ASN ILE THR ASN ASN GLU LYS VAL SEQRES 6 A 337 VAL VAL LYS ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE SEQRES 7 A 337 LYS ARG GLU ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY SEQRES 8 A 337 PRO ASN ILE ILE THR LEU ALA ASP ILE VAL LYS ASP PRO SEQRES 9 A 337 VAL SER ARG THR PRO ALA LEU VAL PHE GLU HIS VAL ASN SEQRES 10 A 337 ASN THR ASP PHE LYS GLN LEU TYR GLN THR LEU THR ASP SEQRES 11 A 337 TYR ASP ILE ARG PHE TYR MET TYR GLU ILE LEU LYS ALA SEQRES 12 A 337 LEU ASP TYR CYS HIS SER MET GLY ILE MET HIS ARG ASP SEQRES 13 A 337 VAL LYS PRO HIS ASN VAL MET ILE ASP HIS GLU HIS ARG SEQRES 14 A 337 LYS LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR SEQRES 15 A 337 HIS PRO GLY GLN GLU TYR ASN VAL ARG VAL ALA SER ARG SEQRES 16 A 337 TYR PHE LYS GLY PRO GLU LEU LEU VAL ASP TYR GLN MET SEQRES 17 A 337 TYR ASP TYR SER LEU ASP MET TRP SER LEU GLY CYS MET SEQRES 18 A 337 LEU ALA SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS SEQRES 19 A 337 GLY HIS ASP ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS SEQRES 20 A 337 VAL LEU GLY THR GLU ASP LEU TYR ASP TYR ILE ASP LYS SEQRES 21 A 337 TYR ASN ILE GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU SEQRES 22 A 337 GLY ARG HIS SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SEQRES 23 A 337 SER GLU ASN GLN HIS LEU VAL SER PRO GLU ALA LEU ASP SEQRES 24 A 337 PHE LEU ASP LYS LEU LEU ARG TYR ASP HIS GLN SER ARG SEQRES 25 A 337 LEU THR ALA ARG GLU ALA MET GLU HIS PRO TYR PHE TYR SEQRES 26 A 337 THR VAL VAL LYS ASP GLN ALA ARG MET GLY SER SER HET 3NG A 338 25 HET SO4 A 339 5 HET SO4 A 340 5 HET SO4 A 341 5 HETNAM 3NG 5-[(3-CHLOROPHENYL)AMINO]BENZO[C][2,6]NAPHTHYRIDINE-8- HETNAM 2 3NG CARBOXYLIC ACID HETNAM SO4 SULFATE ION FORMUL 2 3NG C19 H12 CL N3 O2 FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *392(H2 O) HELIX 1 1 PRO A 20 ASP A 25 1 6 HELIX 2 2 TYR A 26 HIS A 29 5 4 HELIX 3 3 ASN A 35 ASP A 37 5 3 HELIX 4 4 LYS A 75 ARG A 89 1 15 HELIX 5 5 ASP A 120 GLN A 126 1 7 HELIX 6 6 THR A 129 MET A 150 1 22 HELIX 7 7 LYS A 158 HIS A 160 5 3 HELIX 8 8 ASP A 175 ALA A 179 5 5 HELIX 9 9 SER A 194 LYS A 198 5 5 HELIX 10 10 GLY A 199 VAL A 204 1 6 HELIX 11 11 TYR A 211 PHE A 227 1 17 HELIX 12 12 ASP A 237 GLY A 250 1 14 HELIX 13 13 GLY A 250 TYR A 261 1 12 HELIX 14 14 ASP A 266 ILE A 272 5 7 HELIX 15 15 ARG A 280 VAL A 285 5 6 HELIX 16 16 ASN A 289 VAL A 293 5 5 HELIX 17 17 SER A 294 LEU A 305 1 12 HELIX 18 18 ASP A 308 ARG A 312 5 5 HELIX 19 19 THR A 314 GLU A 320 1 7 HELIX 20 20 HIS A 321 TYR A 325 5 5 SHEET 1 A 5 TYR A 39 ARG A 47 0 SHEET 2 A 5 SER A 51 ASN A 58 -1 O VAL A 53 N LEU A 45 SHEET 3 A 5 LYS A 64 LEU A 70 -1 O VAL A 67 N PHE A 54 SHEET 4 A 5 PRO A 109 GLU A 114 -1 O PHE A 113 N VAL A 66 SHEET 5 A 5 LEU A 97 LYS A 102 -1 N VAL A 101 O ALA A 110 SHEET 1 B 2 ILE A 152 MET A 153 0 SHEET 2 B 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 C 2 VAL A 162 ASP A 165 0 SHEET 2 C 2 LYS A 170 LEU A 173 -1 O LYS A 170 N ASP A 165 CISPEP 1 GLU A 230 PRO A 231 0 -0.22 SITE 1 AC1 16 LEU A 45 GLY A 46 VAL A 53 VAL A 66 SITE 2 AC1 16 LYS A 68 PHE A 113 GLU A 114 VAL A 116 SITE 3 AC1 16 HIS A 160 MET A 163 ILE A 174 ASP A 175 SITE 4 AC1 16 HOH A 416 HOH A 427 HOH A 475 HOH A 631 SITE 1 AC2 8 ASP A 253 ARG A 278 ARG A 306 TYR A 307 SITE 2 AC2 8 ASP A 308 HOH A 461 HOH A 476 HOH A 627 SITE 1 AC3 5 ARG A 80 ARG A 155 ASN A 189 HOH A 392 SITE 2 AC3 5 HOH A 433 SITE 1 AC4 5 ARG A 191 LYS A 198 ASN A 238 HOH A 575 SITE 2 AC4 5 HOH A 724 CRYST1 58.478 46.087 63.493 90.00 111.59 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017100 0.000000 0.006769 0.00000 SCALE2 0.000000 0.021698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016939 0.00000