HEADER HYDROLASE 28-OCT-10 3PF8 TITLE CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE TITLE 2 LJ0536 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CINNAMOYL ESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS JOHNSONII; SOURCE 3 ORGANISM_TAXID: 33959; SOURCE 4 GENE: LJ0536; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TV-L KEYWDS ALPHA/BETA HYDROLASE FOLD, ESTERASE, HYDROLASE, CINNAMOYL/FERULOYL KEYWDS 2 ESTERASE, HYDROXYCINAMMATES, EXTRACELLULAR EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,K.K.LAI,C.VU,X.XU,H.CUI,S.MOLLOY,C.F.GONZALEZ,A.YAKUNIN, AUTHOR 2 A.SAVCHENKO REVDAT 3 06-SEP-23 3PF8 1 REMARK SEQADV LINK REVDAT 2 24-OCT-12 3PF8 1 JRNL REVDAT 1 31-AUG-11 3PF8 0 JRNL AUTH K.K.LAI,P.J.STOGIOS,C.VU,X.XU,H.CUI,S.MOLLOY,A.SAVCHENKO, JRNL AUTH 2 A.YAKUNIN,C.F.GONZALEZ JRNL TITL AN INSERTED ALPHA/BETA SUBDOMAIN SHAPES THE CATALYTIC POCKET JRNL TITL 2 OF LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE JRNL REF PLOS ONE V. 6 23269 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 21876742 JRNL DOI 10.1371/JOURNAL.PONE.0023269 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 23386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1194 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2646 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2781 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2506 REMARK 3 BIN R VALUE (WORKING SET) : 0.2733 REMARK 3 BIN FREE R VALUE : 0.3654 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.29 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 140 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3836 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.50930 REMARK 3 B22 (A**2) : 0.50930 REMARK 3 B33 (A**2) : -1.01870 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.404 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.838 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3912 ; 2.000 ; NULL REMARK 3 BOND ANGLES : 5320 ; 2.000 ; NULL REMARK 3 TORSION ANGLES : 1332 ; 2.000 ; NULL REMARK 3 TRIGONAL CARBON PLANES : 116 ; 2.000 ; NULL REMARK 3 GENERAL PLANES : 569 ; 5.000 ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : 3912 ; 20.000 ; NULL REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 524 ; 5.000 ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4663 ; 4.000 ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.23 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.49 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.54 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|-5 - A|179 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.7143 17.1511 35.6343 REMARK 3 T TENSOR REMARK 3 T11: -0.0106 T22: 0.1122 REMARK 3 T33: -0.2379 T12: 0.0000 REMARK 3 T13: 0.0178 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.1062 L22: 1.4455 REMARK 3 L33: 1.1853 L12: -0.1858 REMARK 3 L13: 0.2373 L23: -0.2226 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: 0.1592 S13: -0.1093 REMARK 3 S21: 0.0846 S22: 0.0579 S23: -0.2176 REMARK 3 S31: -0.0076 S32: 0.1150 S33: -0.0241 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|180 - A|245 } REMARK 3 ORIGIN FOR THE GROUP (A): 12.6845 10.8046 48.2312 REMARK 3 T TENSOR REMARK 3 T11: 0.0441 T22: 0.1849 REMARK 3 T33: -0.2314 T12: 0.0406 REMARK 3 T13: 0.0314 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 0.5169 L22: 1.7611 REMARK 3 L33: 0.7990 L12: -0.9561 REMARK 3 L13: 0.2162 L23: -0.7810 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: -0.0749 S13: -0.2366 REMARK 3 S21: 0.2453 S22: 0.0479 S23: 0.0699 REMARK 3 S31: -0.0476 S32: -0.1825 S33: 0.0181 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { B|2 - B|179 } REMARK 3 ORIGIN FOR THE GROUP (A): 9.7076 29.8159 15.1326 REMARK 3 T TENSOR REMARK 3 T11: 0.1115 T22: 0.1228 REMARK 3 T33: -0.2648 T12: -0.0805 REMARK 3 T13: -0.0205 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.3612 L22: 2.0174 REMARK 3 L33: 0.1388 L12: -0.2897 REMARK 3 L13: 0.1518 L23: -0.7242 REMARK 3 S TENSOR REMARK 3 S11: -0.0650 S12: 0.1021 S13: 0.0654 REMARK 3 S21: -0.3238 S22: 0.1038 S23: 0.0926 REMARK 3 S31: -0.0102 S32: 0.0419 S33: -0.0388 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|180 - B|245 } REMARK 3 ORIGIN FOR THE GROUP (A): -5.8958 33.3697 12.4356 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.0599 REMARK 3 T33: -0.1350 T12: -0.0532 REMARK 3 T13: -0.0923 T23: 0.1222 REMARK 3 L TENSOR REMARK 3 L11: 0.1741 L22: 0.7084 REMARK 3 L33: 0.0015 L12: -0.2960 REMARK 3 L13: 0.4070 L23: 0.1701 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: 0.0840 S13: -0.0584 REMARK 3 S21: -0.1288 S22: 0.0502 S23: 0.4516 REMARK 3 S31: 0.1690 S32: -0.0646 S33: -0.0587 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PF8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23389 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 13.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44200 REMARK 200 FOR SHELL : 4.810 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB CODE 2WTN POLY-ALANINE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6, 20% PEG10K, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 74.94950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.27211 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 43.43633 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 74.94950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 43.27211 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 43.43633 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 74.94950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 43.27211 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 43.43633 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 74.94950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 43.27211 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 43.43633 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 74.94950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 43.27211 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 43.43633 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 74.94950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 43.27211 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 43.43633 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 86.54423 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 86.87267 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 86.54423 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 86.87267 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 86.54423 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 86.87267 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 86.54423 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 86.87267 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 86.54423 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 86.87267 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 86.54423 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 86.87267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A 246 REMARK 465 ASN A 247 REMARK 465 ALA A 248 REMARK 465 PHE A 249 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 ARG B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 ASN B 246 REMARK 465 ASN B 247 REMARK 465 ALA B 248 REMARK 465 PHE B 249 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A -4 CG CD1 CD2 REMARK 470 TYR A -3 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE A -2 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A -1 CG CD OE1 NE2 REMARK 470 LEU A 135 CG CD1 CD2 REMARK 470 ASP A 229 CG OD1 OD2 REMARK 470 LYS B 161 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 9 57.94 34.23 REMARK 500 PRO A 20 -151.87 -92.28 REMARK 500 ALA A 36 -162.33 -104.12 REMARK 500 ARG A 98 -82.51 -76.32 REMARK 500 SER A 106 -113.57 52.31 REMARK 500 ALA A 130 60.71 38.40 REMARK 500 LEU A 135 -32.81 -39.84 REMARK 500 ASN A 143 97.11 -163.11 REMARK 500 PHE A 160 -164.47 -114.83 REMARK 500 LEU A 163 -163.57 -115.59 REMARK 500 ALA A 183 -15.61 -48.65 REMARK 500 PHE A 227 100.73 -57.48 REMARK 500 ASP A 229 -123.10 63.36 REMARK 500 THR B 35 -0.39 75.90 REMARK 500 ASN B 39 70.04 -106.41 REMARK 500 ARG B 98 -73.41 -103.94 REMARK 500 SER B 106 -125.98 56.14 REMARK 500 ALA B 130 62.86 33.16 REMARK 500 ALA B 132 38.77 -68.39 REMARK 500 LYS B 161 -102.65 53.50 REMARK 500 CYS B 226 30.39 -80.33 REMARK 500 PHE B 227 57.17 33.12 REMARK 500 ASP B 229 -118.10 52.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 251 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PF9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT REMARK 900 RELATED ID: 3PFA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH CAFFEIC ACID REMARK 900 RELATED ID: 3PFB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH ETHYLFERULATE REMARK 900 RELATED ID: 3PFC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH FERULIC ACID DBREF 3PF8 A 1 249 UNP D3YEX6 D3YEX6_LACJO 1 249 DBREF 3PF8 B 1 249 UNP D3YEX6 D3YEX6_LACJO 1 249 SEQADV 3PF8 MET A -20 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY A -19 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER A -18 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER A -17 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -16 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -15 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -14 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -13 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -12 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS A -11 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER A -10 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER A -9 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY A -8 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 ARG A -7 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLU A -6 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 ASN A -5 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 LEU A -4 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 TYR A -3 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 PHE A -2 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLN A -1 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY A 0 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 MET B -20 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY B -19 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER B -18 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER B -17 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -16 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -15 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -14 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -13 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -12 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 HIS B -11 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER B -10 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 SER B -9 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY B -8 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 ARG B -7 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLU B -6 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 ASN B -5 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 LEU B -4 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 TYR B -3 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 PHE B -2 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLN B -1 UNP D3YEX6 EXPRESSION TAG SEQADV 3PF8 GLY B 0 UNP D3YEX6 EXPRESSION TAG SEQRES 1 A 270 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 270 ARG GLU ASN LEU TYR PHE GLN GLY MET ALA THR ILE THR SEQRES 3 A 270 LEU GLU ARG ASP GLY LEU GLN LEU VAL GLY THR ARG GLU SEQRES 4 A 270 GLU PRO PHE GLY GLU ILE TYR ASP MET ALA ILE ILE PHE SEQRES 5 A 270 HIS GLY PHE THR ALA ASN ARG ASN THR SER LEU LEU ARG SEQRES 6 A 270 GLU ILE ALA ASN SER LEU ARG ASP GLU ASN ILE ALA SER SEQRES 7 A 270 VAL ARG PHE ASP PHE ASN GLY HIS GLY ASP SER ASP GLY SEQRES 8 A 270 LYS PHE GLU ASN MET THR VAL LEU ASN GLU ILE GLU ASP SEQRES 9 A 270 ALA ASN ALA ILE LEU ASN TYR VAL LYS THR ASP PRO HIS SEQRES 10 A 270 VAL ARG ASN ILE TYR LEU VAL GLY HIS SER GLN GLY GLY SEQRES 11 A 270 VAL VAL ALA SER MET LEU ALA GLY LEU TYR PRO ASP LEU SEQRES 12 A 270 ILE LYS LYS VAL VAL LEU LEU ALA PRO ALA ALA THR LEU SEQRES 13 A 270 LYS GLY ASP ALA LEU GLU GLY ASN THR GLN GLY VAL THR SEQRES 14 A 270 TYR ASN PRO ASP HIS ILE PRO ASP ARG LEU PRO PHE LYS SEQRES 15 A 270 ASP LEU THR LEU GLY GLY PHE TYR LEU ARG ILE ALA GLN SEQRES 16 A 270 GLN LEU PRO ILE TYR GLU VAL SER ALA GLN PHE THR LYS SEQRES 17 A 270 PRO VAL CYS LEU ILE HIS GLY THR ASP ASP THR VAL VAL SEQRES 18 A 270 SER PRO ASN ALA SER LYS LYS TYR ASP GLN ILE TYR GLN SEQRES 19 A 270 ASN SER THR LEU HIS LEU ILE GLU GLY ALA ASP HIS CYS SEQRES 20 A 270 PHE SER ASP SER TYR GLN LYS ASN ALA VAL ASN LEU THR SEQRES 21 A 270 THR ASP PHE LEU GLN ASN ASN ASN ALA PHE SEQRES 1 B 270 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 270 ARG GLU ASN LEU TYR PHE GLN GLY MET ALA THR ILE THR SEQRES 3 B 270 LEU GLU ARG ASP GLY LEU GLN LEU VAL GLY THR ARG GLU SEQRES 4 B 270 GLU PRO PHE GLY GLU ILE TYR ASP MET ALA ILE ILE PHE SEQRES 5 B 270 HIS GLY PHE THR ALA ASN ARG ASN THR SER LEU LEU ARG SEQRES 6 B 270 GLU ILE ALA ASN SER LEU ARG ASP GLU ASN ILE ALA SER SEQRES 7 B 270 VAL ARG PHE ASP PHE ASN GLY HIS GLY ASP SER ASP GLY SEQRES 8 B 270 LYS PHE GLU ASN MET THR VAL LEU ASN GLU ILE GLU ASP SEQRES 9 B 270 ALA ASN ALA ILE LEU ASN TYR VAL LYS THR ASP PRO HIS SEQRES 10 B 270 VAL ARG ASN ILE TYR LEU VAL GLY HIS SER GLN GLY GLY SEQRES 11 B 270 VAL VAL ALA SER MET LEU ALA GLY LEU TYR PRO ASP LEU SEQRES 12 B 270 ILE LYS LYS VAL VAL LEU LEU ALA PRO ALA ALA THR LEU SEQRES 13 B 270 LYS GLY ASP ALA LEU GLU GLY ASN THR GLN GLY VAL THR SEQRES 14 B 270 TYR ASN PRO ASP HIS ILE PRO ASP ARG LEU PRO PHE LYS SEQRES 15 B 270 ASP LEU THR LEU GLY GLY PHE TYR LEU ARG ILE ALA GLN SEQRES 16 B 270 GLN LEU PRO ILE TYR GLU VAL SER ALA GLN PHE THR LYS SEQRES 17 B 270 PRO VAL CYS LEU ILE HIS GLY THR ASP ASP THR VAL VAL SEQRES 18 B 270 SER PRO ASN ALA SER LYS LYS TYR ASP GLN ILE TYR GLN SEQRES 19 B 270 ASN SER THR LEU HIS LEU ILE GLU GLY ALA ASP HIS CYS SEQRES 20 B 270 PHE SER ASP SER TYR GLN LYS ASN ALA VAL ASN LEU THR SEQRES 21 B 270 THR ASP PHE LEU GLN ASN ASN ASN ALA PHE HET NA A 250 1 HET NA B 250 1 HET NA B 251 1 HETNAM NA SODIUM ION FORMUL 3 NA 3(NA 1+) FORMUL 6 HOH *146(H2 O) HELIX 1 1 THR A 40 ASP A 52 1 13 HELIX 2 2 LYS A 71 MET A 75 5 5 HELIX 3 3 VAL A 77 LYS A 92 1 16 HELIX 4 4 GLN A 107 TYR A 119 1 13 HELIX 5 5 THR A 134 GLY A 142 1 9 HELIX 6 6 GLY A 167 GLN A 174 1 8 HELIX 7 7 PRO A 177 ALA A 183 1 7 HELIX 8 8 PRO A 202 TYR A 212 1 11 HELIX 9 9 SER A 228 SER A 230 5 3 HELIX 10 10 TYR A 231 LEU A 243 1 13 HELIX 11 11 THR B 40 GLU B 53 1 14 HELIX 12 12 LYS B 71 MET B 75 5 5 HELIX 13 13 THR B 76 ASP B 94 1 19 HELIX 14 14 GLN B 107 TYR B 119 1 13 HELIX 15 15 THR B 134 LEU B 140 1 7 HELIX 16 16 GLY B 167 GLN B 175 1 9 HELIX 17 17 PRO B 177 ALA B 183 1 7 HELIX 18 18 PRO B 202 TYR B 212 1 11 HELIX 19 19 SER B 230 ASN B 245 1 16 SHEET 1 A 8 ALA A 2 ARG A 8 0 SHEET 2 A 8 LEU A 11 GLU A 18 -1 O GLY A 15 N ILE A 4 SHEET 3 A 8 ALA A 56 PHE A 60 -1 O ARG A 59 N THR A 16 SHEET 4 A 8 TYR A 25 PHE A 31 1 N ILE A 30 O VAL A 58 SHEET 5 A 8 VAL A 97 SER A 106 1 O ASN A 99 N MET A 27 SHEET 6 A 8 ILE A 123 PRO A 131 1 O VAL A 127 N LEU A 102 SHEET 7 A 8 VAL A 189 GLY A 194 1 O ILE A 192 N ALA A 130 SHEET 8 A 8 SER A 215 ILE A 220 1 O THR A 216 N LEU A 191 SHEET 1 B 2 ASN A 143 THR A 144 0 SHEET 2 B 2 VAL A 147 THR A 148 -1 O VAL A 147 N THR A 144 SHEET 1 C 2 ARG A 157 PRO A 159 0 SHEET 2 C 2 THR A 164 GLY A 166 -1 O LEU A 165 N LEU A 158 SHEET 1 D 8 THR B 3 ARG B 8 0 SHEET 2 D 8 LEU B 11 GLU B 18 -1 O GLY B 15 N ILE B 4 SHEET 3 D 8 ILE B 55 PHE B 60 -1 O SER B 57 N GLU B 18 SHEET 4 D 8 TYR B 25 PHE B 31 1 N ASP B 26 O ALA B 56 SHEET 5 D 8 VAL B 97 SER B 106 1 O VAL B 103 N PHE B 31 SHEET 6 D 8 ILE B 123 PRO B 131 1 O LYS B 124 N ILE B 100 SHEET 7 D 8 VAL B 189 GLY B 194 1 O CYS B 190 N LEU B 128 SHEET 8 D 8 SER B 215 ILE B 220 1 O THR B 216 N LEU B 191 SHEET 1 E 2 ASN B 143 THR B 144 0 SHEET 2 E 2 VAL B 147 THR B 148 -1 O VAL B 147 N THR B 144 SHEET 1 F 2 ARG B 157 PHE B 160 0 SHEET 2 F 2 LEU B 163 GLY B 166 -1 O LEU B 165 N LEU B 158 LINK NA NA B 250 O HOH B 268 1555 1555 2.56 LINK NA NA B 251 O HOH B 279 1555 1555 2.35 SITE 1 AC1 1 LEU A 78 SITE 1 AC2 2 PRO B 95 HOH B 268 SITE 1 AC3 3 LYS A 161 ALA B 2 HOH B 279 CRYST1 149.899 149.899 130.309 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006671 0.003852 0.000000 0.00000 SCALE2 0.000000 0.007703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007674 0.00000