HEADER HYDROLASE 28-OCT-10 3PFC TITLE CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE TITLE 2 LJ0536 S106A MUTANT IN COMPLEX WITH FERULIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CINNAMOYL ESTERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS JOHNSONII; SOURCE 3 ORGANISM_TAXID: 33959; SOURCE 4 GENE: LJ0536; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TV-L KEYWDS ALPHA/BETA HYDROLASE FOLD, ESTERASE, HYDROLASE, CINNAMOYL/FERULOYL KEYWDS 2 ESTERASE, HYDROXYCINAMMATES, EXTRACELLULAR EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,K.K.LAI,C.VU,X.XU,H.CUI,S.MOLLOY,C.F.GONZALEZ,A.YAKUNIN, AUTHOR 2 A.SAVCHENKO REVDAT 4 03-APR-24 3PFC 1 REMARK REVDAT 3 21-FEB-24 3PFC 1 REMARK SEQADV LINK REVDAT 2 24-OCT-12 3PFC 1 JRNL REVDAT 1 31-AUG-11 3PFC 0 JRNL AUTH K.K.LAI,P.J.STOGIOS,C.VU,X.XU,H.CUI,S.MOLLOY,A.SAVCHENKO, JRNL AUTH 2 A.YAKUNIN,C.F.GONZALEZ JRNL TITL AN INSERTED ALPHA/BETA SUBDOMAIN SHAPES THE CATALYTIC POCKET JRNL TITL 2 OF LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE JRNL REF PLOS ONE V. 6 23269 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 21876742 JRNL DOI 10.1371/JOURNAL.PONE.0023269 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 24852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.6499 - 3.6305 1.00 2809 148 0.1332 0.1403 REMARK 3 2 3.6305 - 2.8858 1.00 2710 143 0.1517 0.1860 REMARK 3 3 2.8858 - 2.5222 0.99 2671 142 0.1604 0.1964 REMARK 3 4 2.5222 - 2.2921 0.99 2668 142 0.1521 0.2015 REMARK 3 5 2.2921 - 2.1281 0.98 2629 140 0.1479 0.1720 REMARK 3 6 2.1281 - 2.0028 0.98 2613 136 0.1491 0.1863 REMARK 3 7 2.0028 - 1.9026 0.97 2582 137 0.1602 0.1713 REMARK 3 8 1.9026 - 1.8199 0.95 2534 134 0.1851 0.2390 REMARK 3 9 1.8199 - 1.7499 0.90 2391 123 0.2326 0.2540 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 49.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.43460 REMARK 3 B22 (A**2) : -1.93760 REMARK 3 B33 (A**2) : 0.50310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2025 REMARK 3 ANGLE : 1.677 2752 REMARK 3 CHIRALITY : 0.120 311 REMARK 3 PLANARITY : 0.010 362 REMARK 3 DIHEDRAL : 13.420 737 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID -5:179 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5885 -11.5703 -7.3898 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.1200 REMARK 3 T33: 0.1463 T12: 0.0121 REMARK 3 T13: -0.0375 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.5539 L22: 2.1455 REMARK 3 L33: 0.3038 L12: 0.3665 REMARK 3 L13: 0.0874 L23: 0.7633 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: -0.0045 S13: -0.0111 REMARK 3 S21: -0.2326 S22: -0.1122 S23: 0.3349 REMARK 3 S31: -0.0373 S32: -0.0396 S33: 0.1177 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 180:244 REMARK 3 ORIGIN FOR THE GROUP (A): -14.5427 -18.4355 -13.6151 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.1387 REMARK 3 T33: 0.1327 T12: 0.0027 REMARK 3 T13: 0.0191 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.3360 L22: 1.9449 REMARK 3 L33: 1.1768 L12: -0.1468 REMARK 3 L13: -0.2259 L23: 0.9583 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.0379 S13: -0.0793 REMARK 3 S21: -0.2860 S22: 0.0577 S23: -0.2101 REMARK 3 S31: -0.0104 S32: 0.1578 S33: -0.0785 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25396 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48400 REMARK 200 FOR SHELL : 2.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII REMARK 200 CINNAMOYL ESTERASE LJ0536 S106A MUTANT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 0.2 M LITHIUM REMARK 280 SULFATE, 30% PEG4K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.49050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.49050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.70100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.70100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.49050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.70100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.49050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.70100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -171.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A 245 REMARK 465 ASN A 246 REMARK 465 ASN A 247 REMARK 465 ALA A 248 REMARK 465 PHE A 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 353 O HOH A 440 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 78 CB - CG - CD1 ANGL. DEV. = -10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 36 -158.72 -92.35 REMARK 500 ARG A 98 -82.02 -92.11 REMARK 500 ALA A 106 -119.64 59.35 REMARK 500 LYS A 161 -128.22 58.07 REMARK 500 ASP A 229 -117.60 55.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PE4 A 265 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 251 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 198 OG1 REMARK 620 2 HOH A 358 O 93.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FER A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 259 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 260 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE4 A 265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PF8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 REMARK 900 RELATED ID: 3PF9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT REMARK 900 RELATED ID: 3PFA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH CAFFEIC ACID REMARK 900 RELATED ID: 3PFB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH ETHYLFERULATE, FORM I REMARK 900 RELATED ID: 3QM1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE REMARK 900 LJ0536 S106A MUTANT IN COMPLEX WITH ETHYLFERULATE, FORM II DBREF 3PFC A 1 249 UNP D3YEX6 D3YEX6_LACJO 1 249 SEQADV 3PFC MET A -20 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC GLY A -19 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC SER A -18 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC SER A -17 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -16 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -15 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -14 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -13 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -12 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC HIS A -11 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC SER A -10 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC SER A -9 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC GLY A -8 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC ARG A -7 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC GLU A -6 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC ASN A -5 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC LEU A -4 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC TYR A -3 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC PHE A -2 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC GLN A -1 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC GLY A 0 UNP D3YEX6 EXPRESSION TAG SEQADV 3PFC ALA A 106 UNP D3YEX6 SER 106 ENGINEERED MUTATION SEQRES 1 A 270 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 270 ARG GLU ASN LEU TYR PHE GLN GLY MET ALA THR ILE THR SEQRES 3 A 270 LEU GLU ARG ASP GLY LEU GLN LEU VAL GLY THR ARG GLU SEQRES 4 A 270 GLU PRO PHE GLY GLU ILE TYR ASP MET ALA ILE ILE PHE SEQRES 5 A 270 HIS GLY PHE THR ALA ASN ARG ASN THR SER LEU LEU ARG SEQRES 6 A 270 GLU ILE ALA ASN SER LEU ARG ASP GLU ASN ILE ALA SER SEQRES 7 A 270 VAL ARG PHE ASP PHE ASN GLY HIS GLY ASP SER ASP GLY SEQRES 8 A 270 LYS PHE GLU ASN MET THR VAL LEU ASN GLU ILE GLU ASP SEQRES 9 A 270 ALA ASN ALA ILE LEU ASN TYR VAL LYS THR ASP PRO HIS SEQRES 10 A 270 VAL ARG ASN ILE TYR LEU VAL GLY HIS ALA GLN GLY GLY SEQRES 11 A 270 VAL VAL ALA SER MET LEU ALA GLY LEU TYR PRO ASP LEU SEQRES 12 A 270 ILE LYS LYS VAL VAL LEU LEU ALA PRO ALA ALA THR LEU SEQRES 13 A 270 LYS GLY ASP ALA LEU GLU GLY ASN THR GLN GLY VAL THR SEQRES 14 A 270 TYR ASN PRO ASP HIS ILE PRO ASP ARG LEU PRO PHE LYS SEQRES 15 A 270 ASP LEU THR LEU GLY GLY PHE TYR LEU ARG ILE ALA GLN SEQRES 16 A 270 GLN LEU PRO ILE TYR GLU VAL SER ALA GLN PHE THR LYS SEQRES 17 A 270 PRO VAL CYS LEU ILE HIS GLY THR ASP ASP THR VAL VAL SEQRES 18 A 270 SER PRO ASN ALA SER LYS LYS TYR ASP GLN ILE TYR GLN SEQRES 19 A 270 ASN SER THR LEU HIS LEU ILE GLU GLY ALA ASP HIS CYS SEQRES 20 A 270 PHE SER ASP SER TYR GLN LYS ASN ALA VAL ASN LEU THR SEQRES 21 A 270 THR ASP PHE LEU GLN ASN ASN ASN ALA PHE HET FER A 250 14 HET NA A 251 1 HET NA A 252 1 HET NA A 253 1 HET CL A 254 1 HET CL A 255 1 HET CL A 256 1 HET CL A 257 1 HET CL A 258 1 HET CL A 259 1 HET CL A 260 1 HET CL A 261 1 HET CL A 262 1 HET CL A 263 1 HET CL A 264 1 HET PE4 A 265 6 HETNAM FER 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETSYN FER FERULIC ACID HETSYN PE4 POLYETHYLENE GLYCOL PEG4000 FORMUL 2 FER C10 H10 O4 FORMUL 3 NA 3(NA 1+) FORMUL 6 CL 11(CL 1-) FORMUL 17 PE4 C16 H34 O8 FORMUL 18 HOH *214(H2 O) HELIX 1 1 THR A 40 GLU A 53 1 14 HELIX 2 2 LYS A 71 MET A 75 5 5 HELIX 3 3 THR A 76 THR A 93 1 18 HELIX 4 4 ALA A 106 TYR A 119 1 14 HELIX 5 5 ALA A 133 GLY A 142 1 10 HELIX 6 6 GLY A 167 GLN A 175 1 9 HELIX 7 7 PRO A 177 ALA A 183 1 7 HELIX 8 8 PRO A 202 TYR A 212 1 11 HELIX 9 9 SER A 228 SER A 230 5 3 HELIX 10 10 TYR A 231 GLN A 244 1 14 SHEET 1 A 8 GLY A 0 ARG A 8 0 SHEET 2 A 8 LEU A 11 GLU A 19 -1 O GLU A 19 N GLY A 0 SHEET 3 A 8 ALA A 56 PHE A 60 -1 O SER A 57 N GLU A 18 SHEET 4 A 8 TYR A 25 PHE A 31 1 N ILE A 30 O VAL A 58 SHEET 5 A 8 VAL A 97 HIS A 105 1 O VAL A 103 N PHE A 31 SHEET 6 A 8 ILE A 123 LEU A 129 1 O LYS A 124 N ILE A 100 SHEET 7 A 8 VAL A 189 GLY A 194 1 O CYS A 190 N LEU A 128 SHEET 8 A 8 SER A 215 ILE A 220 1 O THR A 216 N LEU A 191 SHEET 1 B 2 ASN A 143 THR A 144 0 SHEET 2 B 2 VAL A 147 THR A 148 -1 O VAL A 147 N THR A 144 SHEET 1 C 2 ARG A 157 PHE A 160 0 SHEET 2 C 2 LEU A 163 GLY A 166 -1 O LEU A 165 N LEU A 158 LINK OG1 THR A 198 NA NA A 251 1555 1555 3.14 LINK NA NA A 251 O HOH A 358 1555 1555 3.09 LINK NA NA A 253 O HOH A 364 1555 1555 2.90 SITE 1 AC1 12 GLY A 33 PHE A 34 ALA A 106 GLN A 107 SITE 2 AC1 12 LEU A 135 ASP A 138 THR A 144 GLN A 145 SITE 3 AC1 12 TYR A 169 HIS A 225 HOH A 299 HOH A 401 SITE 1 AC2 4 THR A 198 ASP A 224 HIS A 225 HOH A 358 SITE 1 AC3 3 ARG A 98 ASP A 196 HOH A 364 SITE 1 AC4 5 PRO A 20 PHE A 21 ARG A 51 ASN A 54 SITE 2 AC4 5 HOH A 420 SITE 1 AC5 3 ASN A -5 LEU A -4 HIS A 96 SITE 1 AC6 1 TYR A -3 SITE 1 AC7 3 SER A 41 ARG A 44 CL A 258 SITE 1 AC8 3 ARG A 44 ASN A 48 CL A 257 SITE 1 AC9 1 HOH A 445 SITE 1 BC1 4 HIS A 32 GLY A 33 ALA A 36 HIS A 105 SITE 1 BC2 2 SER A 41 HOH A 474 SITE 1 BC3 3 ILE A 4 THR A 5 ASN A 214 SITE 1 BC4 1 GLU A 221 SITE 1 BC5 1 ASN A 99 SITE 1 BC6 2 LEU A -4 GLU A 180 CRYST1 72.046 85.402 80.981 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013880 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011709 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012349 0.00000