data_3PGG # _entry.id 3PGG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PGG pdb_00003pgg 10.2210/pdb3pgg/pdb RCSB RCSB062346 ? ? WWPDB D_1000062346 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2011-02-02 _pdbx_database_PDB_obs_spr.pdb_id 3PGG _pdbx_database_PDB_obs_spr.replace_pdb_id 2FWK _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PGG _pdbx_database_status.recvd_initial_deposition_date 2010-11-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dong, A.' 1 'Gao, M.' 2 'Zhao, Y.' 3 'Lew, J.' 4 'Wasney, G.A.' 5 'Kozieradzki, I.' 6 'Vedadi, M.' 7 'Edwards, A.' 8 'Arrowsmith, C.' 9 'Weigelt, J.' 10 'Sundstrom, M.' 11 'Bochkarev, A.' 12 'Hui, R.' 13 'Artz, J.' 14 'Structural Genomics Consortium (SGC)' 15 # _citation.id primary _citation.title 'Genome-Scale Protein Expression and Structural Biology of Plasmodium Falciparum and Related Apicomplexan Organisms.' _citation.journal_abbrev Mol.Biochem.Parasitol. _citation.journal_volume 151 _citation.page_first 100 _citation.page_last 110 _citation.year 2007 _citation.journal_id_ASTM MBIPDP _citation.country NE _citation.journal_id_ISSN 0166-6851 _citation.journal_id_CSD 2085 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17125854 _citation.pdbx_database_id_DOI 10.1016/J.MOLBIOPARA.2006.10.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vedadi, M.' 1 ? primary 'Lew, J.' 2 ? primary 'Artz, J.' 3 ? primary 'Amani, M.' 4 ? primary 'Zhao, Y.' 5 ? primary 'Dong, A.' 6 ? primary 'Wasney, G.A.' 7 ? primary 'Gao, M.' 8 ? primary 'Hills, T.' 9 ? primary 'Brokx, S.' 10 ? primary 'Qiu, W.' 11 ? primary 'Sharma, S.' 12 ? primary 'Diassiti, A.' 13 ? primary 'Alam, Z.' 14 ? primary 'Melone, M.' 15 ? primary 'Mulichak, A.' 16 ? primary 'Wernimont, A.' 17 ? primary 'Bray, J.' 18 ? primary 'Loppnau, P.' 19 ? primary 'Plotnikova, O.' 20 ? primary 'Newberry, K.' 21 ? primary 'Sundararajan, E.' 22 ? primary 'Houston, S.' 23 ? primary 'Walker, J.' 24 ? primary 'Tempel, W.' 25 ? primary 'Bochkarev, A.' 26 ? primary 'Kozieradzki, I.' 27 ? primary 'Edwards, A.' 28 ? primary 'Arrowsmith, C.' 29 ? primary 'Roos, D.' 30 ? primary 'Kain, K.' 31 ? primary 'Hui, R.' 32 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U6 snRNA-associated Sm-like protein LSm5. SM domain' 13300.078 2 ? ? ? ? 2 water nat water 18.015 27 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SYKVNYMSETPANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEED ISGGNKKLKRVMVNRLETILLSGNNVAMLVPGGDPDSFNFS ; _entity_poly.pdbx_seq_one_letter_code_can ;SYKVNYMSETPANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEED ISGGNKKLKRVMVNRLETILLSGNNVAMLVPGGDPDSFNFS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 LYS n 1 4 VAL n 1 5 ASN n 1 6 TYR n 1 7 MET n 1 8 SER n 1 9 GLU n 1 10 THR n 1 11 PRO n 1 12 ALA n 1 13 ASN n 1 14 LYS n 1 15 SER n 1 16 GLN n 1 17 GLY n 1 18 GLY n 1 19 SER n 1 20 ASN n 1 21 GLN n 1 22 LYS n 1 23 GLY n 1 24 GLY n 1 25 ASN n 1 26 ILE n 1 27 ILE n 1 28 LEU n 1 29 PRO n 1 30 LEU n 1 31 ALA n 1 32 LEU n 1 33 ILE n 1 34 ASP n 1 35 LYS n 1 36 CYS n 1 37 ILE n 1 38 GLY n 1 39 ASN n 1 40 ARG n 1 41 ILE n 1 42 TYR n 1 43 VAL n 1 44 VAL n 1 45 MET n 1 46 LYS n 1 47 GLY n 1 48 ASP n 1 49 LYS n 1 50 GLU n 1 51 PHE n 1 52 SER n 1 53 GLY n 1 54 VAL n 1 55 LEU n 1 56 ARG n 1 57 GLY n 1 58 PHE n 1 59 ASP n 1 60 GLU n 1 61 TYR n 1 62 VAL n 1 63 ASN n 1 64 MET n 1 65 VAL n 1 66 LEU n 1 67 ASP n 1 68 ASP n 1 69 VAL n 1 70 GLN n 1 71 GLU n 1 72 TYR n 1 73 GLY n 1 74 PHE n 1 75 LYS n 1 76 ALA n 1 77 ASP n 1 78 GLU n 1 79 GLU n 1 80 ASP n 1 81 ILE n 1 82 SER n 1 83 GLY n 1 84 GLY n 1 85 ASN n 1 86 LYS n 1 87 LYS n 1 88 LEU n 1 89 LYS n 1 90 ARG n 1 91 VAL n 1 92 MET n 1 93 VAL n 1 94 ASN n 1 95 ARG n 1 96 LEU n 1 97 GLU n 1 98 THR n 1 99 ILE n 1 100 LEU n 1 101 LEU n 1 102 SER n 1 103 GLY n 1 104 ASN n 1 105 ASN n 1 106 VAL n 1 107 ALA n 1 108 MET n 1 109 LEU n 1 110 VAL n 1 111 PRO n 1 112 GLY n 1 113 GLY n 1 114 ASP n 1 115 PRO n 1 116 ASP n 1 117 SER n 1 118 PHE n 1 119 ASN n 1 120 PHE n 1 121 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene cgd7_4580 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cryptosporidium parvum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5807 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 CODON PLUS RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'P28-LIC-THROMBIN DERIVED FROM PET28' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 TYR 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 VAL 4 4 ? ? ? A . n A 1 5 ASN 5 5 ? ? ? A . n A 1 6 TYR 6 6 ? ? ? A . n A 1 7 MET 7 7 ? ? ? A . n A 1 8 SER 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 ? ? ? A . n A 1 11 PRO 11 11 ? ? ? A . n A 1 12 ALA 12 12 ? ? ? A . n A 1 13 ASN 13 13 ? ? ? A . n A 1 14 LYS 14 14 ? ? ? A . n A 1 15 SER 15 15 ? ? ? A . n A 1 16 GLN 16 16 ? ? ? A . n A 1 17 GLY 17 17 ? ? ? A . n A 1 18 GLY 18 18 ? ? ? A . n A 1 19 SER 19 19 ? ? ? A . n A 1 20 ASN 20 20 ? ? ? A . n A 1 21 GLN 21 21 ? ? ? A . n A 1 22 LYS 22 22 ? ? ? A . n A 1 23 GLY 23 23 ? ? ? A . n A 1 24 GLY 24 24 ? ? ? A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLU 78 78 ? ? ? A . n A 1 79 GLU 79 79 ? ? ? A . n A 1 80 ASP 80 80 ? ? ? A . n A 1 81 ILE 81 81 ? ? ? A . n A 1 82 SER 82 82 ? ? ? A . n A 1 83 GLY 83 83 ? ? ? A . n A 1 84 GLY 84 84 ? ? ? A . n A 1 85 ASN 85 85 ? ? ? A . n A 1 86 LYS 86 86 ? ? ? A . n A 1 87 LYS 87 87 ? ? ? A . n A 1 88 LEU 88 88 ? ? ? A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ASP 114 114 ? ? ? A . n A 1 115 PRO 115 115 ? ? ? A . n A 1 116 ASP 116 116 ? ? ? A . n A 1 117 SER 117 117 ? ? ? A . n A 1 118 PHE 118 118 ? ? ? A . n A 1 119 ASN 119 119 ? ? ? A . n A 1 120 PHE 120 120 ? ? ? A . n A 1 121 SER 121 121 ? ? ? A . n B 1 1 SER 1 1 ? ? ? B . n B 1 2 TYR 2 2 ? ? ? B . n B 1 3 LYS 3 3 ? ? ? B . n B 1 4 VAL 4 4 ? ? ? B . n B 1 5 ASN 5 5 ? ? ? B . n B 1 6 TYR 6 6 ? ? ? B . n B 1 7 MET 7 7 ? ? ? B . n B 1 8 SER 8 8 ? ? ? B . n B 1 9 GLU 9 9 ? ? ? B . n B 1 10 THR 10 10 ? ? ? B . n B 1 11 PRO 11 11 ? ? ? B . n B 1 12 ALA 12 12 ? ? ? B . n B 1 13 ASN 13 13 ? ? ? B . n B 1 14 LYS 14 14 ? ? ? B . n B 1 15 SER 15 15 ? ? ? B . n B 1 16 GLN 16 16 ? ? ? B . n B 1 17 GLY 17 17 ? ? ? B . n B 1 18 GLY 18 18 ? ? ? B . n B 1 19 SER 19 19 ? ? ? B . n B 1 20 ASN 20 20 ? ? ? B . n B 1 21 GLN 21 21 ? ? ? B . n B 1 22 LYS 22 22 ? ? ? B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ASN 25 25 25 ASN ASN B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 ILE 27 27 27 ILE ILE B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 ASP 34 34 34 ASP ASP B . n B 1 35 LYS 35 35 35 LYS LYS B . n B 1 36 CYS 36 36 36 CYS CYS B . n B 1 37 ILE 37 37 37 ILE ILE B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 ILE 41 41 41 ILE ILE B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 MET 45 45 45 MET MET B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 PHE 51 51 51 PHE PHE B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 ARG 56 56 56 ARG ARG B . n B 1 57 GLY 57 57 57 GLY GLY B . n B 1 58 PHE 58 58 58 PHE PHE B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 TYR 61 61 61 TYR TYR B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 MET 64 64 64 MET MET B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 LEU 66 66 66 LEU LEU B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 ASP 68 68 68 ASP ASP B . n B 1 69 VAL 69 69 69 VAL VAL B . n B 1 70 GLN 70 70 70 GLN GLN B . n B 1 71 GLU 71 71 71 GLU GLU B . n B 1 72 TYR 72 72 72 TYR TYR B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 LYS 75 75 75 LYS LYS B . n B 1 76 ALA 76 76 76 ALA ALA B . n B 1 77 ASP 77 77 ? ? ? B . n B 1 78 GLU 78 78 ? ? ? B . n B 1 79 GLU 79 79 ? ? ? B . n B 1 80 ASP 80 80 ? ? ? B . n B 1 81 ILE 81 81 ? ? ? B . n B 1 82 SER 82 82 ? ? ? B . n B 1 83 GLY 83 83 ? ? ? B . n B 1 84 GLY 84 84 ? ? ? B . n B 1 85 ASN 85 85 ? ? ? B . n B 1 86 LYS 86 86 ? ? ? B . n B 1 87 LYS 87 87 ? ? ? B . n B 1 88 LEU 88 88 ? ? ? B . n B 1 89 LYS 89 89 89 LYS LYS B . n B 1 90 ARG 90 90 90 ARG ARG B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 MET 92 92 92 MET MET B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 ASN 94 94 94 ASN ASN B . n B 1 95 ARG 95 95 95 ARG ARG B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 THR 98 98 98 THR THR B . n B 1 99 ILE 99 99 99 ILE ILE B . n B 1 100 LEU 100 100 100 LEU LEU B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 SER 102 102 102 SER SER B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 ASN 105 105 105 ASN ASN B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 MET 108 108 108 MET MET B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 PRO 111 111 111 PRO PRO B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 GLY 113 113 113 GLY GLY B . n B 1 114 ASP 114 114 114 ASP ASP B . n B 1 115 PRO 115 115 ? ? ? B . n B 1 116 ASP 116 116 ? ? ? B . n B 1 117 SER 117 117 ? ? ? B . n B 1 118 PHE 118 118 ? ? ? B . n B 1 119 ASN 119 119 ? ? ? B . n B 1 120 PHE 120 120 ? ? ? B . n B 1 121 SER 121 121 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 122 3 HOH HOH A . C 2 HOH 2 123 5 HOH HOH A . C 2 HOH 3 124 8 HOH HOH A . C 2 HOH 4 125 10 HOH HOH A . C 2 HOH 5 126 11 HOH HOH A . C 2 HOH 6 127 14 HOH HOH A . C 2 HOH 7 128 16 HOH HOH A . C 2 HOH 8 129 19 HOH HOH A . C 2 HOH 9 130 23 HOH HOH A . C 2 HOH 10 131 25 HOH HOH A . C 2 HOH 11 132 27 HOH HOH A . D 2 HOH 1 122 1 HOH HOH B . D 2 HOH 2 123 2 HOH HOH B . D 2 HOH 3 124 4 HOH HOH B . D 2 HOH 4 125 6 HOH HOH B . D 2 HOH 5 126 7 HOH HOH B . D 2 HOH 6 127 9 HOH HOH B . D 2 HOH 7 128 12 HOH HOH B . D 2 HOH 8 129 13 HOH HOH B . D 2 HOH 9 130 15 HOH HOH B . D 2 HOH 10 131 17 HOH HOH B . D 2 HOH 11 132 18 HOH HOH B . D 2 HOH 12 133 20 HOH HOH B . D 2 HOH 13 134 21 HOH HOH B . D 2 HOH 14 135 22 HOH HOH B . D 2 HOH 15 136 24 HOH HOH B . D 2 HOH 16 137 26 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 25 ? CG ? A ASN 25 CG 2 1 Y 1 A ASN 25 ? OD1 ? A ASN 25 OD1 3 1 Y 1 A ASN 25 ? ND2 ? A ASN 25 ND2 4 1 Y 1 A ILE 26 ? CD1 ? A ILE 26 CD1 5 1 Y 1 A ILE 27 ? CG1 ? A ILE 27 CG1 6 1 Y 1 A ILE 27 ? CG2 ? A ILE 27 CG2 7 1 Y 1 A ILE 27 ? CD1 ? A ILE 27 CD1 8 1 Y 1 A LYS 35 ? CG ? A LYS 35 CG 9 1 Y 1 A LYS 35 ? CD ? A LYS 35 CD 10 1 Y 1 A LYS 35 ? CE ? A LYS 35 CE 11 1 Y 1 A LYS 35 ? NZ ? A LYS 35 NZ 12 1 Y 1 A ILE 37 ? CD1 ? A ILE 37 CD1 13 1 Y 1 A LYS 75 ? CG ? A LYS 75 CG 14 1 Y 1 A LYS 75 ? CD ? A LYS 75 CD 15 1 Y 1 A LYS 75 ? CE ? A LYS 75 CE 16 1 Y 1 A LYS 75 ? NZ ? A LYS 75 NZ 17 1 Y 1 A ASP 77 ? CG ? A ASP 77 CG 18 1 Y 1 A ASP 77 ? OD1 ? A ASP 77 OD1 19 1 Y 1 A ASP 77 ? OD2 ? A ASP 77 OD2 20 1 Y 1 A LYS 89 ? CG ? A LYS 89 CG 21 1 Y 1 A LYS 89 ? CD ? A LYS 89 CD 22 1 Y 1 A LYS 89 ? CE ? A LYS 89 CE 23 1 Y 1 A LYS 89 ? NZ ? A LYS 89 NZ 24 1 Y 1 A ARG 90 ? CG ? A ARG 90 CG 25 1 Y 1 A ARG 90 ? CD ? A ARG 90 CD 26 1 Y 1 A ARG 90 ? NE ? A ARG 90 NE 27 1 Y 1 A ARG 90 ? CZ ? A ARG 90 CZ 28 1 Y 1 A ARG 90 ? NH1 ? A ARG 90 NH1 29 1 Y 1 A ARG 90 ? NH2 ? A ARG 90 NH2 30 1 Y 1 A VAL 91 ? CG1 ? A VAL 91 CG1 31 1 Y 1 A VAL 91 ? CG2 ? A VAL 91 CG2 32 1 Y 1 B LYS 35 ? CD ? B LYS 35 CD 33 1 Y 1 B LYS 35 ? CE ? B LYS 35 CE 34 1 Y 1 B LYS 35 ? NZ ? B LYS 35 NZ 35 1 Y 1 B LYS 49 ? CG ? B LYS 49 CG 36 1 Y 1 B LYS 49 ? CD ? B LYS 49 CD 37 1 Y 1 B LYS 49 ? CE ? B LYS 49 CE 38 1 Y 1 B LYS 49 ? NZ ? B LYS 49 NZ 39 1 Y 1 B ARG 56 ? CZ ? B ARG 56 CZ 40 1 Y 1 B ARG 56 ? NH1 ? B ARG 56 NH1 41 1 Y 1 B ARG 56 ? NH2 ? B ARG 56 NH2 42 1 Y 1 B LYS 75 ? CG ? B LYS 75 CG 43 1 Y 1 B LYS 75 ? CD ? B LYS 75 CD 44 1 Y 1 B LYS 75 ? CE ? B LYS 75 CE 45 1 Y 1 B LYS 75 ? NZ ? B LYS 75 NZ 46 1 Y 1 B LYS 89 ? CG ? B LYS 89 CG 47 1 Y 1 B LYS 89 ? CD ? B LYS 89 CD 48 1 Y 1 B LYS 89 ? CE ? B LYS 89 CE 49 1 Y 1 B LYS 89 ? NZ ? B LYS 89 NZ 50 1 Y 1 B ARG 90 ? CG ? B ARG 90 CG 51 1 Y 1 B ARG 90 ? CD ? B ARG 90 CD 52 1 Y 1 B ARG 90 ? NE ? B ARG 90 NE 53 1 Y 1 B ARG 90 ? CZ ? B ARG 90 CZ 54 1 Y 1 B ARG 90 ? NH1 ? B ARG 90 NH1 55 1 Y 1 B ARG 90 ? NH2 ? B ARG 90 NH2 56 1 Y 1 B ARG 95 ? CG ? B ARG 95 CG 57 1 Y 1 B ARG 95 ? CD ? B ARG 95 CD 58 1 Y 1 B ARG 95 ? NE ? B ARG 95 NE 59 1 Y 1 B ARG 95 ? CZ ? B ARG 95 CZ 60 1 Y 1 B ARG 95 ? NH1 ? B ARG 95 NH1 61 1 Y 1 B ARG 95 ? NH2 ? B ARG 95 NH2 62 1 Y 1 B GLU 97 ? CG ? B GLU 97 CG 63 1 Y 1 B GLU 97 ? CD ? B GLU 97 CD 64 1 Y 1 B GLU 97 ? OE1 ? B GLU 97 OE1 65 1 Y 1 B GLU 97 ? OE2 ? B GLU 97 OE2 66 1 Y 1 B ASP 114 ? CG ? B ASP 114 CG 67 1 Y 1 B ASP 114 ? OD1 ? B ASP 114 OD1 68 1 Y 1 B ASP 114 ? OD2 ? B ASP 114 OD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 PHASER phasing 'V. 1.3.1' ? 2 REFMAC refinement 5.5.0109 ? 3 Coot 'model building' 0.6 ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 # _cell.entry_id 3PGG _cell.length_a 101.163 _cell.length_b 101.163 _cell.length_c 49.092 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PGG _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3PGG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '1.05 M NA CITRATE, 100 MM BISTRIS PH6.5, VAPOR DIFFUSION, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2005-11-25 _diffrn_detector.details 'VERIMAX HR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3PGG _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.14 _reflns.number_obs 16363 _reflns.number_all 16363 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI 54.88 _reflns.B_iso_Wilson_estimate 48.8 _reflns.pdbx_redundancy 10.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.14 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 84.9 _reflns_shell.Rmerge_I_obs 0.795 _reflns_shell.pdbx_Rsym_value 0.795 _reflns_shell.meanI_over_sigI_obs 2.87 _reflns_shell.pdbx_redundancy 10.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 866 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3PGG _refine.ls_number_reflns_obs 15457 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.14 _refine.ls_percent_reflns_obs 99.58 _refine.ls_R_factor_obs 0.21600 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21398 _refine.ls_R_factor_R_free 0.25783 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 809 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 49.076 _refine.aniso_B[1][1] -5.84 _refine.aniso_B[2][2] -5.84 _refine.aniso_B[3][3] 11.68 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 1M8V _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.033 _refine.overall_SU_ML 0.207 _refine.overall_SU_B 10.261 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1154 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 1181 _refine_hist.d_res_high 2.14 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1166 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.298 1.987 ? 1578 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.373 5.000 ? 154 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.889 25.652 ? 46 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.031 15.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.450 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.117 0.200 ? 190 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.017 0.021 ? 862 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.010 1.500 ? 772 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.186 2.000 ? 1221 'X-RAY DIFFRACTION' ? r_scbond_it 4.606 3.000 ? 394 'X-RAY DIFFRACTION' ? r_scangle_it 6.773 4.500 ? 357 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.14 _refine_ls_shell.d_res_low 2.192 _refine_ls_shell.number_reflns_R_work 1083 _refine_ls_shell.R_factor_R_work 0.215 _refine_ls_shell.percent_reflns_obs 96.14 _refine_ls_shell.R_factor_R_free 0.377 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3PGG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3PGG _struct.title 'Crystal structure of cryptosporidium parvum u6 snrna-associated sm-like protein lsm5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PGG _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN, LSM5, DNA BINDING PROTEIN, Structural Genomics, Structural Genomics Consortium, SGC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5CXX3_CRYPV _struct_ref.pdbx_db_accession Q5CXX3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SYKVNYMSETPANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEED ISGGNKKLKRVMVNRLETILLSGNNVAMLVPGGDPDSFNFS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PGG A 1 ? 121 ? Q5CXX3 1 ? 121 ? 1 121 2 1 3PGG B 1 ? 121 ? Q5CXX3 1 ? 121 ? 1 121 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9110 ? 1 MORE -61 ? 1 'SSA (A^2)' 20570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 101.1630000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 50.5815000000 -0.8660254038 -0.5000000000 0.0000000000 87.6097279230 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details HEXAMERIC # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 28 ? CYS A 36 ? LEU A 28 CYS A 36 1 ? 9 HELX_P HELX_P2 2 SER A 102 ? ASN A 104 ? SER A 102 ASN A 104 5 ? 3 HELX_P HELX_P3 3 LEU B 28 ? CYS B 36 ? LEU B 28 CYS B 36 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 90 ? LEU A 96 ? ARG A 90 LEU A 96 A 2 MET A 64 ? PHE A 74 ? MET A 64 PHE A 74 A 3 ILE A 99 ? LEU A 101 ? ILE A 99 LEU A 101 B 1 ARG A 90 ? LEU A 96 ? ARG A 90 LEU A 96 B 2 MET A 64 ? PHE A 74 ? MET A 64 PHE A 74 B 3 GLU A 50 ? PHE A 58 ? GLU A 50 PHE A 58 B 4 ARG A 40 ? MET A 45 ? ARG A 40 MET A 45 B 5 VAL A 106 ? PRO A 111 ? VAL A 106 PRO A 111 B 6 ARG B 90 ? LEU B 101 ? ARG B 90 LEU B 101 B 7 MET B 64 ? PHE B 74 ? MET B 64 PHE B 74 B 8 LYS B 49 ? PHE B 58 ? LYS B 49 PHE B 58 B 9 ARG B 40 ? MET B 45 ? ARG B 40 MET B 45 B 10 VAL B 106 ? VAL B 110 ? VAL B 106 VAL B 110 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 94 ? O ASN A 94 N GLU A 71 ? N GLU A 71 A 2 3 N MET A 64 ? N MET A 64 O LEU A 101 ? O LEU A 101 B 1 2 O ASN A 94 ? O ASN A 94 N GLU A 71 ? N GLU A 71 B 2 3 O ASP A 67 ? O ASP A 67 N VAL A 54 ? N VAL A 54 B 3 4 O GLY A 53 ? O GLY A 53 N ILE A 41 ? N ILE A 41 B 4 5 N TYR A 42 ? N TYR A 42 O VAL A 110 ? O VAL A 110 B 5 6 N LEU A 109 ? N LEU A 109 O LEU B 100 ? O LEU B 100 B 6 7 O VAL B 91 ? O VAL B 91 N GLY B 73 ? N GLY B 73 B 7 8 O ASP B 67 ? O ASP B 67 N VAL B 54 ? N VAL B 54 B 8 9 O GLY B 53 ? O GLY B 53 N ILE B 41 ? N ILE B 41 B 9 10 N VAL B 44 ? N VAL B 44 O MET B 108 ? O MET B 108 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 97 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -102.56 _pdbx_validate_torsion.psi -125.44 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ASP A 67 ? ? -11.21 2 1 ILE A 99 ? ? -10.17 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A TYR 2 ? A TYR 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A VAL 4 ? A VAL 4 5 1 Y 1 A ASN 5 ? A ASN 5 6 1 Y 1 A TYR 6 ? A TYR 6 7 1 Y 1 A MET 7 ? A MET 7 8 1 Y 1 A SER 8 ? A SER 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A THR 10 ? A THR 10 11 1 Y 1 A PRO 11 ? A PRO 11 12 1 Y 1 A ALA 12 ? A ALA 12 13 1 Y 1 A ASN 13 ? A ASN 13 14 1 Y 1 A LYS 14 ? A LYS 14 15 1 Y 1 A SER 15 ? A SER 15 16 1 Y 1 A GLN 16 ? A GLN 16 17 1 Y 1 A GLY 17 ? A GLY 17 18 1 Y 1 A GLY 18 ? A GLY 18 19 1 Y 1 A SER 19 ? A SER 19 20 1 Y 1 A ASN 20 ? A ASN 20 21 1 Y 1 A GLN 21 ? A GLN 21 22 1 Y 1 A LYS 22 ? A LYS 22 23 1 Y 1 A GLY 23 ? A GLY 23 24 1 Y 1 A GLY 24 ? A GLY 24 25 1 Y 1 A GLU 78 ? A GLU 78 26 1 Y 1 A GLU 79 ? A GLU 79 27 1 Y 1 A ASP 80 ? A ASP 80 28 1 Y 1 A ILE 81 ? A ILE 81 29 1 Y 1 A SER 82 ? A SER 82 30 1 Y 1 A GLY 83 ? A GLY 83 31 1 Y 1 A GLY 84 ? A GLY 84 32 1 Y 1 A ASN 85 ? A ASN 85 33 1 Y 1 A LYS 86 ? A LYS 86 34 1 Y 1 A LYS 87 ? A LYS 87 35 1 Y 1 A LEU 88 ? A LEU 88 36 1 Y 1 A ASP 114 ? A ASP 114 37 1 Y 1 A PRO 115 ? A PRO 115 38 1 Y 1 A ASP 116 ? A ASP 116 39 1 Y 1 A SER 117 ? A SER 117 40 1 Y 1 A PHE 118 ? A PHE 118 41 1 Y 1 A ASN 119 ? A ASN 119 42 1 Y 1 A PHE 120 ? A PHE 120 43 1 Y 1 A SER 121 ? A SER 121 44 1 Y 1 B SER 1 ? B SER 1 45 1 Y 1 B TYR 2 ? B TYR 2 46 1 Y 1 B LYS 3 ? B LYS 3 47 1 Y 1 B VAL 4 ? B VAL 4 48 1 Y 1 B ASN 5 ? B ASN 5 49 1 Y 1 B TYR 6 ? B TYR 6 50 1 Y 1 B MET 7 ? B MET 7 51 1 Y 1 B SER 8 ? B SER 8 52 1 Y 1 B GLU 9 ? B GLU 9 53 1 Y 1 B THR 10 ? B THR 10 54 1 Y 1 B PRO 11 ? B PRO 11 55 1 Y 1 B ALA 12 ? B ALA 12 56 1 Y 1 B ASN 13 ? B ASN 13 57 1 Y 1 B LYS 14 ? B LYS 14 58 1 Y 1 B SER 15 ? B SER 15 59 1 Y 1 B GLN 16 ? B GLN 16 60 1 Y 1 B GLY 17 ? B GLY 17 61 1 Y 1 B GLY 18 ? B GLY 18 62 1 Y 1 B SER 19 ? B SER 19 63 1 Y 1 B ASN 20 ? B ASN 20 64 1 Y 1 B GLN 21 ? B GLN 21 65 1 Y 1 B LYS 22 ? B LYS 22 66 1 Y 1 B ASP 77 ? B ASP 77 67 1 Y 1 B GLU 78 ? B GLU 78 68 1 Y 1 B GLU 79 ? B GLU 79 69 1 Y 1 B ASP 80 ? B ASP 80 70 1 Y 1 B ILE 81 ? B ILE 81 71 1 Y 1 B SER 82 ? B SER 82 72 1 Y 1 B GLY 83 ? B GLY 83 73 1 Y 1 B GLY 84 ? B GLY 84 74 1 Y 1 B ASN 85 ? B ASN 85 75 1 Y 1 B LYS 86 ? B LYS 86 76 1 Y 1 B LYS 87 ? B LYS 87 77 1 Y 1 B LEU 88 ? B LEU 88 78 1 Y 1 B PRO 115 ? B PRO 115 79 1 Y 1 B ASP 116 ? B ASP 116 80 1 Y 1 B SER 117 ? B SER 117 81 1 Y 1 B PHE 118 ? B PHE 118 82 1 Y 1 B ASN 119 ? B ASN 119 83 1 Y 1 B PHE 120 ? B PHE 120 84 1 Y 1 B SER 121 ? B SER 121 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TYR N N N N 300 TYR CA C N S 301 TYR C C N N 302 TYR O O N N 303 TYR CB C N N 304 TYR CG C Y N 305 TYR CD1 C Y N 306 TYR CD2 C Y N 307 TYR CE1 C Y N 308 TYR CE2 C Y N 309 TYR CZ C Y N 310 TYR OH O N N 311 TYR OXT O N N 312 TYR H H N N 313 TYR H2 H N N 314 TYR HA H N N 315 TYR HB2 H N N 316 TYR HB3 H N N 317 TYR HD1 H N N 318 TYR HD2 H N N 319 TYR HE1 H N N 320 TYR HE2 H N N 321 TYR HH H N N 322 TYR HXT H N N 323 VAL N N N N 324 VAL CA C N S 325 VAL C C N N 326 VAL O O N N 327 VAL CB C N N 328 VAL CG1 C N N 329 VAL CG2 C N N 330 VAL OXT O N N 331 VAL H H N N 332 VAL H2 H N N 333 VAL HA H N N 334 VAL HB H N N 335 VAL HG11 H N N 336 VAL HG12 H N N 337 VAL HG13 H N N 338 VAL HG21 H N N 339 VAL HG22 H N N 340 VAL HG23 H N N 341 VAL HXT H N N 342 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TYR N CA sing N N 285 TYR N H sing N N 286 TYR N H2 sing N N 287 TYR CA C sing N N 288 TYR CA CB sing N N 289 TYR CA HA sing N N 290 TYR C O doub N N 291 TYR C OXT sing N N 292 TYR CB CG sing N N 293 TYR CB HB2 sing N N 294 TYR CB HB3 sing N N 295 TYR CG CD1 doub Y N 296 TYR CG CD2 sing Y N 297 TYR CD1 CE1 sing Y N 298 TYR CD1 HD1 sing N N 299 TYR CD2 CE2 doub Y N 300 TYR CD2 HD2 sing N N 301 TYR CE1 CZ doub Y N 302 TYR CE1 HE1 sing N N 303 TYR CE2 CZ sing Y N 304 TYR CE2 HE2 sing N N 305 TYR CZ OH sing N N 306 TYR OH HH sing N N 307 TYR OXT HXT sing N N 308 VAL N CA sing N N 309 VAL N H sing N N 310 VAL N H2 sing N N 311 VAL CA C sing N N 312 VAL CA CB sing N N 313 VAL CA HA sing N N 314 VAL C O doub N N 315 VAL C OXT sing N N 316 VAL CB CG1 sing N N 317 VAL CB CG2 sing N N 318 VAL CB HB sing N N 319 VAL CG1 HG11 sing N N 320 VAL CG1 HG12 sing N N 321 VAL CG1 HG13 sing N N 322 VAL CG2 HG21 sing N N 323 VAL CG2 HG22 sing N N 324 VAL CG2 HG23 sing N N 325 VAL OXT HXT sing N N 326 # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.601 2 1 1 ? h+k,-k,-l 0.399 # _atom_sites.entry_id 3PGG _atom_sites.fract_transf_matrix[1][1] 0.009885 _atom_sites.fract_transf_matrix[1][2] 0.005707 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011414 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020370 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_