HEADER OXIDOREDUCTASE 04-NOV-10 3PHI TITLE SHIKIMATE 5-DEHYDROGENASE (AROE) FROM HELICOBACTER PYLORI IN COMPLEX TITLE 2 WITH SHIKIMATE AND NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHIKIMATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.25; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_COMMON: CAMPYLOBACTER PYLORI; SOURCE 4 ORGANISM_TAXID: 85962; SOURCE 5 STRAIN: 26695; SOURCE 6 GENE: AROE, HP_1249; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS SHIKIMATE DEHYDROGENASE, SHIKIMATE PATHWAY, HELICOBACTER PYLORI, KEYWDS 2 OXIDOREDUCTASE, ALPHA/BETA DOMAIN, ROSSMANN FOLD EXPDTA X-RAY DIFFRACTION AUTHOR W.C.CHENG,S.C.LIN,W.C.WANG REVDAT 2 01-NOV-23 3PHI 1 REMARK SEQADV REVDAT 1 09-NOV-11 3PHI 0 JRNL AUTH W.C.CHENG,S.C.LIN,W.C.WANG JRNL TITL SHIKIMATE 5-DEHYDROGENASE (AROE) FROM HELICOBACTER PYLORI IN JRNL TITL 2 COMPLEX WITH SHIKIMATE AND NADPH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0077 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 30682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1646 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1873 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4054 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 165 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.15000 REMARK 3 B22 (A**2) : -2.18000 REMARK 3 B33 (A**2) : -2.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4273 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5773 ; 1.656 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 514 ; 5.945 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 173 ;35.637 ;24.451 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 744 ;16.001 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.736 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 641 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3128 ; 0.018 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2570 ; 1.931 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4100 ; 3.156 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1703 ; 4.975 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1673 ; 7.306 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PHI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000062380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32329 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : 0.03700 REMARK 200 FOR THE DATA SET : 32.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.13100 REMARK 200 R SYM FOR SHELL (I) : 0.13100 REMARK 200 FOR SHELL : 10.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3PHG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 8000, 0.1M BIS-TRIS, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.19550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 115 REMARK 465 LYS A 116 REMARK 465 ASN A 117 REMARK 465 PHE A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 GLN B 115 REMARK 465 LYS B 116 REMARK 465 ASN B 117 REMARK 465 PHE B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 50 -55.41 73.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SKM A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SKM B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 1411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PHG RELATED DB: PDB REMARK 900 THE APO FORM OF THE SAME PROTEIN REMARK 900 RELATED ID: 3PHH RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SHIKIMATE REMARK 900 RELATED ID: 3PHJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 3-DEHYDROSHIKIMATE DBREF 3PHI A 1 263 UNP P56119 AROE_HELPY 1 263 DBREF 3PHI B 1 263 UNP P56119 AROE_HELPY 1 263 SEQADV 3PHI HIS A 264 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS A 265 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS A 266 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS A 267 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS A 268 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS A 269 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 264 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 265 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 266 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 267 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 268 UNP P56119 EXPRESSION TAG SEQADV 3PHI HIS B 269 UNP P56119 EXPRESSION TAG SEQRES 1 A 269 MET LYS LEU LYS SER PHE GLY VAL PHE GLY ASN PRO ILE SEQRES 2 A 269 LYS HIS SER LYS SER PRO LEU ILE HIS ASN ALA CYS PHE SEQRES 3 A 269 LEU THR PHE GLN LYS GLU LEU ARG PHE LEU GLY HIS TYR SEQRES 4 A 269 HIS PRO ILE LEU LEU PRO LEU GLU SER HIS ILE LYS SER SEQRES 5 A 269 GLU PHE LEU HIS LEU GLY LEU SER GLY ALA ASN VAL THR SEQRES 6 A 269 LEU PRO PHE LYS GLU ARG ALA PHE GLN VAL CYS ASP LYS SEQRES 7 A 269 ILE LYS GLY ILE ALA LEU GLU CYS GLY ALA VAL ASN THR SEQRES 8 A 269 LEU VAL LEU GLU ASN ASP GLU LEU VAL GLY TYR ASN THR SEQRES 9 A 269 ASP ALA LEU GLY PHE TYR LEU SER LEU LYS GLN LYS ASN SEQRES 10 A 269 TYR GLN ASN ALA LEU ILE LEU GLY ALA GLY GLY SER ALA SEQRES 11 A 269 LYS ALA LEU ALA CYS GLU LEU LYS LYS GLN GLY LEU GLN SEQRES 12 A 269 VAL SER VAL LEU ASN ARG SER SER ARG GLY LEU ASP PHE SEQRES 13 A 269 PHE GLN ARG LEU GLY CYS ASP CYS PHE MET GLU PRO PRO SEQRES 14 A 269 LYS SER ALA PHE ASP LEU ILE ILE ASN ALA THR SER ALA SEQRES 15 A 269 SER LEU HIS ASN GLU LEU PRO LEU ASN LYS GLU VAL LEU SEQRES 16 A 269 LYS GLY TYR PHE LYS GLU GLY LYS LEU ALA TYR ASP LEU SEQRES 17 A 269 ALA TYR GLY PHE LEU THR PRO PHE LEU SER LEU ALA LYS SEQRES 18 A 269 GLU LEU LYS THR PRO PHE GLN ASP GLY LYS ASP MET LEU SEQRES 19 A 269 ILE TYR GLN ALA ALA LEU SER PHE GLU LYS PHE SER ALA SEQRES 20 A 269 SER GLN ILE PRO TYR SER LYS ALA PHE GLU VAL MET ARG SEQRES 21 A 269 SER VAL PHE HIS HIS HIS HIS HIS HIS SEQRES 1 B 269 MET LYS LEU LYS SER PHE GLY VAL PHE GLY ASN PRO ILE SEQRES 2 B 269 LYS HIS SER LYS SER PRO LEU ILE HIS ASN ALA CYS PHE SEQRES 3 B 269 LEU THR PHE GLN LYS GLU LEU ARG PHE LEU GLY HIS TYR SEQRES 4 B 269 HIS PRO ILE LEU LEU PRO LEU GLU SER HIS ILE LYS SER SEQRES 5 B 269 GLU PHE LEU HIS LEU GLY LEU SER GLY ALA ASN VAL THR SEQRES 6 B 269 LEU PRO PHE LYS GLU ARG ALA PHE GLN VAL CYS ASP LYS SEQRES 7 B 269 ILE LYS GLY ILE ALA LEU GLU CYS GLY ALA VAL ASN THR SEQRES 8 B 269 LEU VAL LEU GLU ASN ASP GLU LEU VAL GLY TYR ASN THR SEQRES 9 B 269 ASP ALA LEU GLY PHE TYR LEU SER LEU LYS GLN LYS ASN SEQRES 10 B 269 TYR GLN ASN ALA LEU ILE LEU GLY ALA GLY GLY SER ALA SEQRES 11 B 269 LYS ALA LEU ALA CYS GLU LEU LYS LYS GLN GLY LEU GLN SEQRES 12 B 269 VAL SER VAL LEU ASN ARG SER SER ARG GLY LEU ASP PHE SEQRES 13 B 269 PHE GLN ARG LEU GLY CYS ASP CYS PHE MET GLU PRO PRO SEQRES 14 B 269 LYS SER ALA PHE ASP LEU ILE ILE ASN ALA THR SER ALA SEQRES 15 B 269 SER LEU HIS ASN GLU LEU PRO LEU ASN LYS GLU VAL LEU SEQRES 16 B 269 LYS GLY TYR PHE LYS GLU GLY LYS LEU ALA TYR ASP LEU SEQRES 17 B 269 ALA TYR GLY PHE LEU THR PRO PHE LEU SER LEU ALA LYS SEQRES 18 B 269 GLU LEU LYS THR PRO PHE GLN ASP GLY LYS ASP MET LEU SEQRES 19 B 269 ILE TYR GLN ALA ALA LEU SER PHE GLU LYS PHE SER ALA SEQRES 20 B 269 SER GLN ILE PRO TYR SER LYS ALA PHE GLU VAL MET ARG SEQRES 21 B 269 SER VAL PHE HIS HIS HIS HIS HIS HIS HET SKM A 500 12 HET NDP A1411 48 HET SKM B 500 12 HET NDP B1411 48 HETNAM SKM (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC HETNAM 2 SKM ACID HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETSYN SKM SHIKIMATE FORMUL 3 SKM 2(C7 H10 O5) FORMUL 4 NDP 2(C21 H30 N7 O17 P3) FORMUL 7 HOH *165(H2 O) HELIX 1 1 LYS A 17 PHE A 29 1 13 HELIX 2 2 PHE A 29 ARG A 34 1 6 HELIX 3 3 HIS A 49 LEU A 57 1 9 HELIX 4 4 PHE A 68 CYS A 76 1 9 HELIX 5 5 ILE A 82 GLY A 87 1 6 HELIX 6 6 THR A 104 LEU A 113 1 10 HELIX 7 7 GLY A 127 GLN A 140 1 14 HELIX 8 8 LEU A 154 GLY A 161 1 8 HELIX 9 9 ASN A 191 GLY A 202 1 12 HELIX 10 10 THR A 214 LEU A 223 1 10 HELIX 11 11 GLY A 230 SER A 246 1 17 HELIX 12 12 PRO A 251 VAL A 262 1 12 HELIX 13 13 LYS B 17 PHE B 29 1 13 HELIX 14 14 PHE B 29 ARG B 34 1 6 HELIX 15 15 ILE B 50 GLY B 58 1 9 HELIX 16 16 PHE B 68 CYS B 76 1 9 HELIX 17 17 ILE B 82 GLY B 87 1 6 HELIX 18 18 THR B 104 LEU B 113 1 10 HELIX 19 19 GLY B 127 GLN B 140 1 14 HELIX 20 20 LEU B 154 LEU B 160 1 7 HELIX 21 21 SER B 181 HIS B 185 5 5 HELIX 22 22 ASN B 191 GLY B 202 1 12 HELIX 23 23 THR B 214 LEU B 223 1 10 HELIX 24 24 GLY B 230 SER B 246 1 17 HELIX 25 25 PRO B 251 VAL B 262 1 12 SHEET 1 A 6 LEU A 36 LEU A 43 0 SHEET 2 A 6 LEU A 3 GLY A 10 1 N PHE A 6 O HIS A 38 SHEET 3 A 6 GLY A 61 VAL A 64 1 O ASN A 63 N PHE A 9 SHEET 4 A 6 THR A 91 GLU A 95 -1 O LEU A 92 N ALA A 62 SHEET 5 A 6 GLU A 98 TYR A 102 -1 O VAL A 100 N VAL A 93 SHEET 6 A 6 LYS A 78 ILE A 79 1 N LYS A 78 O GLY A 101 SHEET 1 B 6 ASP A 163 PHE A 165 0 SHEET 2 B 6 GLN A 143 LEU A 147 1 N VAL A 146 O PHE A 165 SHEET 3 B 6 ASN A 120 LEU A 124 1 N ILE A 123 O LEU A 147 SHEET 4 B 6 LEU A 175 ASN A 178 1 O LEU A 175 N LEU A 122 SHEET 5 B 6 LEU A 204 ASP A 207 1 O TYR A 206 N ASN A 178 SHEET 6 B 6 PHE A 227 GLN A 228 1 O GLN A 228 N ASP A 207 SHEET 1 C 6 LEU B 36 LEU B 43 0 SHEET 2 C 6 LEU B 3 GLY B 10 1 N PHE B 6 O HIS B 38 SHEET 3 C 6 GLY B 61 VAL B 64 1 O ASN B 63 N GLY B 7 SHEET 4 C 6 THR B 91 GLU B 95 -1 O LEU B 92 N ALA B 62 SHEET 5 C 6 GLU B 98 TYR B 102 -1 O GLU B 98 N GLU B 95 SHEET 6 C 6 LYS B 78 ILE B 79 1 N LYS B 78 O GLY B 101 SHEET 1 D 6 ASP B 163 PHE B 165 0 SHEET 2 D 6 GLN B 143 LEU B 147 1 N VAL B 146 O PHE B 165 SHEET 3 D 6 ASN B 120 LEU B 124 1 N ILE B 123 O SER B 145 SHEET 4 D 6 LEU B 175 ASN B 178 1 O ILE B 177 N LEU B 124 SHEET 5 D 6 LEU B 204 ASP B 207 1 O TYR B 206 N ILE B 176 SHEET 6 D 6 PHE B 227 GLN B 228 1 O GLN B 228 N ASP B 207 CISPEP 1 ASN A 11 PRO A 12 0 6.38 CISPEP 2 LEU A 66 PRO A 67 0 7.07 CISPEP 3 ASN B 11 PRO B 12 0 5.38 CISPEP 4 LEU B 66 PRO B 67 0 -5.90 SITE 1 AC1 12 SER A 16 SER A 18 ASN A 63 VAL A 64 SITE 2 AC1 12 THR A 65 LYS A 69 ASN A 90 ASP A 105 SITE 3 AC1 12 TYR A 210 GLN A 237 HOH A 286 NDP A1411 SITE 1 AC2 28 LEU A 66 PRO A 67 LYS A 69 ALA A 126 SITE 2 AC2 28 GLY A 127 GLY A 128 SER A 129 ASN A 148 SITE 3 AC2 28 ARG A 149 SER A 150 ALA A 179 THR A 180 SITE 4 AC2 28 SER A 181 LEU A 184 PRO A 189 LEU A 208 SITE 5 AC2 28 TYR A 210 GLY A 230 MET A 233 LEU A 234 SITE 6 AC2 28 HOH A 273 HOH A 276 HOH A 286 HOH A 306 SITE 7 AC2 28 HOH A 309 HOH A 316 HOH A 347 SKM A 500 SITE 1 AC3 11 SER B 16 SER B 18 ASN B 63 THR B 65 SITE 2 AC3 11 LYS B 69 ASN B 90 ASP B 105 TYR B 210 SITE 3 AC3 11 GLN B 237 HOH B 293 NDP B1411 SITE 1 AC4 33 LEU B 66 PRO B 67 LYS B 69 ASP B 105 SITE 2 AC4 33 GLY B 125 ALA B 126 GLY B 127 GLY B 128 SITE 3 AC4 33 SER B 129 ASN B 148 ARG B 149 SER B 150 SITE 4 AC4 33 ALA B 179 THR B 180 SER B 181 ALA B 182 SITE 5 AC4 33 LEU B 184 GLU B 187 PRO B 189 LEU B 208 SITE 6 AC4 33 TYR B 210 GLY B 230 MET B 233 LEU B 234 SITE 7 AC4 33 HOH B 271 HOH B 279 HOH B 293 HOH B 297 SITE 8 AC4 33 HOH B 309 HOH B 336 HOH B 339 HOH B 342 SITE 9 AC4 33 SKM B 500 CRYST1 44.990 48.391 123.002 90.00 97.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022227 0.000000 0.002970 0.00000 SCALE2 0.000000 0.020665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008202 0.00000