data_3PKR # _entry.id 3PKR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PKR RCSB RCSB062492 WWPDB D_1000062492 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2011-12-14 _pdbx_database_PDB_obs_spr.pdb_id 3USW _pdbx_database_PDB_obs_spr.replace_pdb_id 3PKR _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3PL4 _pdbx_database_related.details 'FliG (residue 116-343)' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3PKR _pdbx_database_status.recvd_initial_deposition_date 2010-11-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Au, S.W.N.' 1 'Lam, K.H.' 2 # _citation.id primary _citation.title 'Crystal structure of FliG from H. pylori' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lam, K.H.' 1 primary 'Ling, K.W.' 2 primary 'Ottemann, K.M.' 3 primary 'Au, S.W.N.' 4 # _cell.entry_id 3PKR _cell.length_a 125.460 _cell.length_b 125.460 _cell.length_c 39.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PKR _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Flagellar motor switch protein' 31367.115 1 ? ? 'residues 86-343' ? 2 water nat water 18.015 27 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FliG # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHHHHHMASMTGGQQMGRGSLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIAL ILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAK TTLARIESVDNKLAGAIKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQY LGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHHHHHMASMTGGQQMGRGSLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIAL ILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAK TTLARIESVDNKLAGAIKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQY LGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 MET n 1 9 ALA n 1 10 SER n 1 11 MET n 1 12 THR n 1 13 GLY n 1 14 GLY n 1 15 GLN n 1 16 GLN n 1 17 MET n 1 18 GLY n 1 19 ARG n 1 20 GLY n 1 21 SER n 1 22 LEU n 1 23 GLU n 1 24 TYR n 1 25 ALA n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 THR n 1 31 ARG n 1 32 THR n 1 33 LEU n 1 34 GLY n 1 35 SER n 1 36 GLU n 1 37 GLU n 1 38 ALA n 1 39 LYS n 1 40 LYS n 1 41 VAL n 1 42 MET n 1 43 ASP n 1 44 LYS n 1 45 LEU n 1 46 THR n 1 47 LYS n 1 48 SER n 1 49 LEU n 1 50 GLN n 1 51 THR n 1 52 GLN n 1 53 LYS n 1 54 ASN n 1 55 PHE n 1 56 ALA n 1 57 TYR n 1 58 LEU n 1 59 GLY n 1 60 LYS n 1 61 ILE n 1 62 LYS n 1 63 PRO n 1 64 GLN n 1 65 GLN n 1 66 LEU n 1 67 ALA n 1 68 ASP n 1 69 PHE n 1 70 ILE n 1 71 ILE n 1 72 ASN n 1 73 GLU n 1 74 HIS n 1 75 PRO n 1 76 GLN n 1 77 THR n 1 78 ILE n 1 79 ALA n 1 80 LEU n 1 81 ILE n 1 82 LEU n 1 83 ALA n 1 84 HIS n 1 85 MET n 1 86 GLU n 1 87 ALA n 1 88 PRO n 1 89 ASN n 1 90 ALA n 1 91 ALA n 1 92 GLU n 1 93 THR n 1 94 LEU n 1 95 SER n 1 96 TYR n 1 97 PHE n 1 98 PRO n 1 99 ASP n 1 100 GLU n 1 101 MET n 1 102 LYS n 1 103 ALA n 1 104 GLU n 1 105 ILE n 1 106 SER n 1 107 ILE n 1 108 ARG n 1 109 MET n 1 110 ALA n 1 111 ASN n 1 112 LEU n 1 113 GLY n 1 114 GLU n 1 115 ILE n 1 116 SER n 1 117 PRO n 1 118 GLN n 1 119 VAL n 1 120 VAL n 1 121 LYS n 1 122 ARG n 1 123 VAL n 1 124 SER n 1 125 THR n 1 126 VAL n 1 127 LEU n 1 128 GLU n 1 129 ASN n 1 130 LYS n 1 131 LEU n 1 132 GLU n 1 133 SER n 1 134 LEU n 1 135 THR n 1 136 SER n 1 137 TYR n 1 138 LYS n 1 139 ILE n 1 140 GLU n 1 141 VAL n 1 142 GLY n 1 143 GLY n 1 144 LEU n 1 145 ARG n 1 146 ALA n 1 147 VAL n 1 148 ALA n 1 149 GLU n 1 150 ILE n 1 151 PHE n 1 152 ASN n 1 153 ARG n 1 154 LEU n 1 155 GLY n 1 156 GLN n 1 157 LYS n 1 158 SER n 1 159 ALA n 1 160 LYS n 1 161 THR n 1 162 THR n 1 163 LEU n 1 164 ALA n 1 165 ARG n 1 166 ILE n 1 167 GLU n 1 168 SER n 1 169 VAL n 1 170 ASP n 1 171 ASN n 1 172 LYS n 1 173 LEU n 1 174 ALA n 1 175 GLY n 1 176 ALA n 1 177 ILE n 1 178 LYS n 1 179 GLU n 1 180 MET n 1 181 MET n 1 182 PHE n 1 183 THR n 1 184 PHE n 1 185 GLU n 1 186 ASP n 1 187 ILE n 1 188 VAL n 1 189 LYS n 1 190 LEU n 1 191 ASP n 1 192 ASN n 1 193 PHE n 1 194 ALA n 1 195 ILE n 1 196 ARG n 1 197 GLU n 1 198 ILE n 1 199 LEU n 1 200 LYS n 1 201 VAL n 1 202 ALA n 1 203 ASP n 1 204 LYS n 1 205 LYS n 1 206 ASP n 1 207 LEU n 1 208 SER n 1 209 LEU n 1 210 ALA n 1 211 LEU n 1 212 LYS n 1 213 THR n 1 214 SER n 1 215 THR n 1 216 LYS n 1 217 ASP n 1 218 LEU n 1 219 THR n 1 220 ASP n 1 221 LYS n 1 222 PHE n 1 223 LEU n 1 224 ASN n 1 225 ASN n 1 226 MET n 1 227 SER n 1 228 SER n 1 229 ARG n 1 230 ALA n 1 231 ALA n 1 232 GLU n 1 233 GLN n 1 234 PHE n 1 235 VAL n 1 236 GLU n 1 237 GLU n 1 238 MET n 1 239 GLN n 1 240 TYR n 1 241 LEU n 1 242 GLY n 1 243 ALA n 1 244 VAL n 1 245 LYS n 1 246 ILE n 1 247 LYS n 1 248 ASP n 1 249 VAL n 1 250 ASP n 1 251 VAL n 1 252 ALA n 1 253 GLN n 1 254 ARG n 1 255 LYS n 1 256 ILE n 1 257 ILE n 1 258 GLU n 1 259 ILE n 1 260 VAL n 1 261 GLN n 1 262 SER n 1 263 LEU n 1 264 GLN n 1 265 GLU n 1 266 LYS n 1 267 GLY n 1 268 VAL n 1 269 ILE n 1 270 GLN n 1 271 THR n 1 272 GLY n 1 273 GLU n 1 274 GLU n 1 275 GLU n 1 276 ASP n 1 277 VAL n 1 278 ILE n 1 279 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene HP_0352 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 26695 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 210 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pAC28m _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O25119_HELPY _struct_ref.pdbx_db_accession O25119 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEM KAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAIKEMM FTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKIIEIVQ SLQEKGVIQTGEEEDVIE ; _struct_ref.pdbx_align_begin 86 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3PKR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 279 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O25119 _struct_ref_seq.db_align_beg 86 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 343 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 86 _struct_ref_seq.pdbx_auth_seq_align_end 343 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PKR HIS A 1 ? UNP O25119 ? ? 'EXPRESSION TAG' 65 1 1 3PKR HIS A 2 ? UNP O25119 ? ? 'EXPRESSION TAG' 66 2 1 3PKR HIS A 3 ? UNP O25119 ? ? 'EXPRESSION TAG' 67 3 1 3PKR HIS A 4 ? UNP O25119 ? ? 'EXPRESSION TAG' 68 4 1 3PKR HIS A 5 ? UNP O25119 ? ? 'EXPRESSION TAG' 69 5 1 3PKR HIS A 6 ? UNP O25119 ? ? 'EXPRESSION TAG' 70 6 1 3PKR HIS A 7 ? UNP O25119 ? ? 'EXPRESSION TAG' 71 7 1 3PKR MET A 8 ? UNP O25119 ? ? 'EXPRESSION TAG' 72 8 1 3PKR ALA A 9 ? UNP O25119 ? ? 'EXPRESSION TAG' 73 9 1 3PKR SER A 10 ? UNP O25119 ? ? 'EXPRESSION TAG' 74 10 1 3PKR MET A 11 ? UNP O25119 ? ? 'EXPRESSION TAG' 75 11 1 3PKR THR A 12 ? UNP O25119 ? ? 'EXPRESSION TAG' 76 12 1 3PKR GLY A 13 ? UNP O25119 ? ? 'EXPRESSION TAG' 77 13 1 3PKR GLY A 14 ? UNP O25119 ? ? 'EXPRESSION TAG' 78 14 1 3PKR GLN A 15 ? UNP O25119 ? ? 'EXPRESSION TAG' 79 15 1 3PKR GLN A 16 ? UNP O25119 ? ? 'EXPRESSION TAG' 80 16 1 3PKR MET A 17 ? UNP O25119 ? ? 'EXPRESSION TAG' 81 17 1 3PKR GLY A 18 ? UNP O25119 ? ? 'EXPRESSION TAG' 82 18 1 3PKR ARG A 19 ? UNP O25119 ? ? 'EXPRESSION TAG' 83 19 1 3PKR GLY A 20 ? UNP O25119 ? ? 'EXPRESSION TAG' 84 20 1 3PKR SER A 21 ? UNP O25119 ? ? 'EXPRESSION TAG' 85 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PKR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.31 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details '0.1M ammonium sulfate, 0.3M sodium formate, 0.1M Tris, 1% PGA, 7% PEG8000, pH 7.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-03-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3PKR _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 41.07 _reflns.d_resolution_high 2.6 _reflns.number_obs 11276 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.435 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1639 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3PKR _refine.ls_number_reflns_obs 10695 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.07 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.48 _refine.ls_R_factor_obs 0.23580 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23412 _refine.ls_R_factor_R_free 0.26791 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 535 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.B_iso_mean 58.505 _refine.aniso_B[1][1] -1.94 _refine.aniso_B[2][2] -1.94 _refine.aniso_B[3][3] 2.91 _refine.aniso_B[1][2] -0.97 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.284 _refine.overall_SU_ML 0.249 _refine.overall_SU_B 26.163 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1686 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 1713 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 41.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1710 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.645 1.981 ? 2300 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.667 5.000 ? 216 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.791 25.890 ? 73 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.386 15.000 ? 344 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25.822 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.111 0.200 ? 276 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1223 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.859 1.500 ? 1078 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.715 2.000 ? 1740 'X-RAY DIFFRACTION' ? r_scbond_it 2.723 3.000 ? 632 'X-RAY DIFFRACTION' ? r_scangle_it 4.776 4.500 ? 559 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.601 _refine_ls_shell.d_res_low 2.669 _refine_ls_shell.number_reflns_R_work 804 _refine_ls_shell.R_factor_R_work 0.314 _refine_ls_shell.percent_reflns_obs 99.65 _refine_ls_shell.R_factor_R_free 0.323 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3PKR _struct.title 'Crystal structure of FliG (residue 86-343) from H. pylori' _struct.pdbx_descriptor 'Flagellar motor switch protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PKR _struct_keywords.pdbx_keywords 'MOTOR PROTEIN' _struct_keywords.text 'motor switch, FliF, FliM, MotA, flagellar motor, MOTOR PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 55 ? ILE A 61 ? PHE A 119 ILE A 125 5 ? 7 HELX_P HELX_P2 2 LYS A 62 ? ILE A 71 ? LYS A 126 ILE A 135 1 ? 10 HELX_P HELX_P3 3 HIS A 74 ? HIS A 84 ? HIS A 138 HIS A 148 1 ? 11 HELX_P HELX_P4 4 GLU A 86 ? SER A 95 ? GLU A 150 SER A 159 1 ? 10 HELX_P HELX_P5 5 PRO A 98 ? ASN A 111 ? PRO A 162 ASN A 175 1 ? 14 HELX_P HELX_P6 6 SER A 116 ? SER A 133 ? SER A 180 SER A 197 1 ? 18 HELX_P HELX_P7 7 GLY A 143 ? ARG A 153 ? GLY A 207 ARG A 217 1 ? 11 HELX_P HELX_P8 8 GLY A 155 ? SER A 168 ? GLY A 219 SER A 232 1 ? 14 HELX_P HELX_P9 9 ASP A 170 ? GLU A 179 ? ASP A 234 GLU A 243 1 ? 10 HELX_P HELX_P10 10 THR A 183 ? LEU A 190 ? THR A 247 LEU A 254 5 ? 8 HELX_P HELX_P11 11 ASP A 191 ? ALA A 202 ? ASP A 255 ALA A 266 1 ? 12 HELX_P HELX_P12 12 ASP A 203 ? LEU A 211 ? ASP A 267 LEU A 275 1 ? 9 HELX_P HELX_P13 13 THR A 215 ? ASN A 224 ? THR A 279 ASN A 288 1 ? 10 HELX_P HELX_P14 14 SER A 227 ? LEU A 241 ? SER A 291 LEU A 305 1 ? 15 HELX_P HELX_P15 15 LYS A 245 ? LYS A 266 ? LYS A 309 LYS A 330 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 3PKR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PKR _atom_sites.fract_transf_matrix[1][1] 0.007971 _atom_sites.fract_transf_matrix[1][2] 0.004602 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009204 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025138 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 65 ? ? ? A . n A 1 2 HIS 2 66 ? ? ? A . n A 1 3 HIS 3 67 ? ? ? A . n A 1 4 HIS 4 68 ? ? ? A . n A 1 5 HIS 5 69 ? ? ? A . n A 1 6 HIS 6 70 ? ? ? A . n A 1 7 HIS 7 71 ? ? ? A . n A 1 8 MET 8 72 ? ? ? A . n A 1 9 ALA 9 73 ? ? ? A . n A 1 10 SER 10 74 ? ? ? A . n A 1 11 MET 11 75 ? ? ? A . n A 1 12 THR 12 76 ? ? ? A . n A 1 13 GLY 13 77 ? ? ? A . n A 1 14 GLY 14 78 ? ? ? A . n A 1 15 GLN 15 79 ? ? ? A . n A 1 16 GLN 16 80 ? ? ? A . n A 1 17 MET 17 81 ? ? ? A . n A 1 18 GLY 18 82 ? ? ? A . n A 1 19 ARG 19 83 ? ? ? A . n A 1 20 GLY 20 84 ? ? ? A . n A 1 21 SER 21 85 ? ? ? A . n A 1 22 LEU 22 86 ? ? ? A . n A 1 23 GLU 23 87 ? ? ? A . n A 1 24 TYR 24 88 ? ? ? A . n A 1 25 ALA 25 89 ? ? ? A . n A 1 26 ARG 26 90 ? ? ? A . n A 1 27 GLU 27 91 ? ? ? A . n A 1 28 LEU 28 92 ? ? ? A . n A 1 29 LEU 29 93 ? ? ? A . n A 1 30 THR 30 94 ? ? ? A . n A 1 31 ARG 31 95 ? ? ? A . n A 1 32 THR 32 96 ? ? ? A . n A 1 33 LEU 33 97 ? ? ? A . n A 1 34 GLY 34 98 ? ? ? A . n A 1 35 SER 35 99 ? ? ? A . n A 1 36 GLU 36 100 ? ? ? A . n A 1 37 GLU 37 101 ? ? ? A . n A 1 38 ALA 38 102 ? ? ? A . n A 1 39 LYS 39 103 ? ? ? A . n A 1 40 LYS 40 104 ? ? ? A . n A 1 41 VAL 41 105 ? ? ? A . n A 1 42 MET 42 106 ? ? ? A . n A 1 43 ASP 43 107 ? ? ? A . n A 1 44 LYS 44 108 ? ? ? A . n A 1 45 LEU 45 109 ? ? ? A . n A 1 46 THR 46 110 ? ? ? A . n A 1 47 LYS 47 111 ? ? ? A . n A 1 48 SER 48 112 ? ? ? A . n A 1 49 LEU 49 113 ? ? ? A . n A 1 50 GLN 50 114 ? ? ? A . n A 1 51 THR 51 115 ? ? ? A . n A 1 52 GLN 52 116 ? ? ? A . n A 1 53 LYS 53 117 117 LYS LYS A . n A 1 54 ASN 54 118 118 ASN ASN A . n A 1 55 PHE 55 119 119 PHE PHE A . n A 1 56 ALA 56 120 120 ALA ALA A . n A 1 57 TYR 57 121 121 TYR TYR A . n A 1 58 LEU 58 122 122 LEU LEU A . n A 1 59 GLY 59 123 123 GLY GLY A . n A 1 60 LYS 60 124 124 LYS LYS A . n A 1 61 ILE 61 125 125 ILE ILE A . n A 1 62 LYS 62 126 126 LYS LYS A . n A 1 63 PRO 63 127 127 PRO PRO A . n A 1 64 GLN 64 128 128 GLN GLN A . n A 1 65 GLN 65 129 129 GLN GLN A . n A 1 66 LEU 66 130 130 LEU LEU A . n A 1 67 ALA 67 131 131 ALA ALA A . n A 1 68 ASP 68 132 132 ASP ASP A . n A 1 69 PHE 69 133 133 PHE PHE A . n A 1 70 ILE 70 134 134 ILE ILE A . n A 1 71 ILE 71 135 135 ILE ILE A . n A 1 72 ASN 72 136 136 ASN ASN A . n A 1 73 GLU 73 137 137 GLU GLU A . n A 1 74 HIS 74 138 138 HIS HIS A . n A 1 75 PRO 75 139 139 PRO PRO A . n A 1 76 GLN 76 140 140 GLN GLN A . n A 1 77 THR 77 141 141 THR THR A . n A 1 78 ILE 78 142 142 ILE ILE A . n A 1 79 ALA 79 143 143 ALA ALA A . n A 1 80 LEU 80 144 144 LEU LEU A . n A 1 81 ILE 81 145 145 ILE ILE A . n A 1 82 LEU 82 146 146 LEU LEU A . n A 1 83 ALA 83 147 147 ALA ALA A . n A 1 84 HIS 84 148 148 HIS HIS A . n A 1 85 MET 85 149 149 MET MET A . n A 1 86 GLU 86 150 150 GLU GLU A . n A 1 87 ALA 87 151 151 ALA ALA A . n A 1 88 PRO 88 152 152 PRO PRO A . n A 1 89 ASN 89 153 153 ASN ASN A . n A 1 90 ALA 90 154 154 ALA ALA A . n A 1 91 ALA 91 155 155 ALA ALA A . n A 1 92 GLU 92 156 156 GLU GLU A . n A 1 93 THR 93 157 157 THR THR A . n A 1 94 LEU 94 158 158 LEU LEU A . n A 1 95 SER 95 159 159 SER SER A . n A 1 96 TYR 96 160 160 TYR TYR A . n A 1 97 PHE 97 161 161 PHE PHE A . n A 1 98 PRO 98 162 162 PRO PRO A . n A 1 99 ASP 99 163 163 ASP ASP A . n A 1 100 GLU 100 164 164 GLU GLU A . n A 1 101 MET 101 165 165 MET MET A . n A 1 102 LYS 102 166 166 LYS LYS A . n A 1 103 ALA 103 167 167 ALA ALA A . n A 1 104 GLU 104 168 168 GLU GLU A . n A 1 105 ILE 105 169 169 ILE ILE A . n A 1 106 SER 106 170 170 SER SER A . n A 1 107 ILE 107 171 171 ILE ILE A . n A 1 108 ARG 108 172 172 ARG ARG A . n A 1 109 MET 109 173 173 MET MET A . n A 1 110 ALA 110 174 174 ALA ALA A . n A 1 111 ASN 111 175 175 ASN ASN A . n A 1 112 LEU 112 176 176 LEU LEU A . n A 1 113 GLY 113 177 177 GLY GLY A . n A 1 114 GLU 114 178 178 GLU GLU A . n A 1 115 ILE 115 179 179 ILE ILE A . n A 1 116 SER 116 180 180 SER SER A . n A 1 117 PRO 117 181 181 PRO PRO A . n A 1 118 GLN 118 182 182 GLN GLN A . n A 1 119 VAL 119 183 183 VAL VAL A . n A 1 120 VAL 120 184 184 VAL VAL A . n A 1 121 LYS 121 185 185 LYS LYS A . n A 1 122 ARG 122 186 186 ARG ARG A . n A 1 123 VAL 123 187 187 VAL VAL A . n A 1 124 SER 124 188 188 SER SER A . n A 1 125 THR 125 189 189 THR THR A . n A 1 126 VAL 126 190 190 VAL VAL A . n A 1 127 LEU 127 191 191 LEU LEU A . n A 1 128 GLU 128 192 192 GLU GLU A . n A 1 129 ASN 129 193 193 ASN ASN A . n A 1 130 LYS 130 194 194 LYS LYS A . n A 1 131 LEU 131 195 195 LEU LEU A . n A 1 132 GLU 132 196 196 GLU GLU A . n A 1 133 SER 133 197 197 SER SER A . n A 1 134 LEU 134 198 198 LEU LEU A . n A 1 135 THR 135 199 199 THR THR A . n A 1 136 SER 136 200 ? ? ? A . n A 1 137 TYR 137 201 ? ? ? A . n A 1 138 LYS 138 202 ? ? ? A . n A 1 139 ILE 139 203 203 ILE ALA A . n A 1 140 GLU 140 204 204 GLU ALA A . n A 1 141 VAL 141 205 205 VAL VAL A . n A 1 142 GLY 142 206 206 GLY GLY A . n A 1 143 GLY 143 207 207 GLY GLY A . n A 1 144 LEU 144 208 208 LEU LEU A . n A 1 145 ARG 145 209 209 ARG ARG A . n A 1 146 ALA 146 210 210 ALA ALA A . n A 1 147 VAL 147 211 211 VAL VAL A . n A 1 148 ALA 148 212 212 ALA ALA A . n A 1 149 GLU 149 213 213 GLU GLU A . n A 1 150 ILE 150 214 214 ILE ILE A . n A 1 151 PHE 151 215 215 PHE PHE A . n A 1 152 ASN 152 216 216 ASN ASN A . n A 1 153 ARG 153 217 217 ARG ARG A . n A 1 154 LEU 154 218 218 LEU LEU A . n A 1 155 GLY 155 219 219 GLY GLY A . n A 1 156 GLN 156 220 220 GLN GLN A . n A 1 157 LYS 157 221 221 LYS LYS A . n A 1 158 SER 158 222 222 SER SER A . n A 1 159 ALA 159 223 223 ALA ALA A . n A 1 160 LYS 160 224 224 LYS LYS A . n A 1 161 THR 161 225 225 THR THR A . n A 1 162 THR 162 226 226 THR THR A . n A 1 163 LEU 163 227 227 LEU LEU A . n A 1 164 ALA 164 228 228 ALA ALA A . n A 1 165 ARG 165 229 229 ARG ARG A . n A 1 166 ILE 166 230 230 ILE ILE A . n A 1 167 GLU 167 231 231 GLU GLU A . n A 1 168 SER 168 232 232 SER SER A . n A 1 169 VAL 169 233 233 VAL VAL A . n A 1 170 ASP 170 234 234 ASP ASP A . n A 1 171 ASN 171 235 235 ASN ASN A . n A 1 172 LYS 172 236 236 LYS LYS A . n A 1 173 LEU 173 237 237 LEU LEU A . n A 1 174 ALA 174 238 238 ALA ALA A . n A 1 175 GLY 175 239 239 GLY GLY A . n A 1 176 ALA 176 240 240 ALA ALA A . n A 1 177 ILE 177 241 241 ILE ILE A . n A 1 178 LYS 178 242 242 LYS LYS A . n A 1 179 GLU 179 243 243 GLU GLU A . n A 1 180 MET 180 244 244 MET MET A . n A 1 181 MET 181 245 245 MET MET A . n A 1 182 PHE 182 246 246 PHE PHE A . n A 1 183 THR 183 247 247 THR THR A . n A 1 184 PHE 184 248 248 PHE PHE A . n A 1 185 GLU 185 249 249 GLU GLU A . n A 1 186 ASP 186 250 250 ASP ASP A . n A 1 187 ILE 187 251 251 ILE ILE A . n A 1 188 VAL 188 252 252 VAL VAL A . n A 1 189 LYS 189 253 253 LYS LYS A . n A 1 190 LEU 190 254 254 LEU LEU A . n A 1 191 ASP 191 255 255 ASP ASP A . n A 1 192 ASN 192 256 256 ASN ASN A . n A 1 193 PHE 193 257 257 PHE PHE A . n A 1 194 ALA 194 258 258 ALA ALA A . n A 1 195 ILE 195 259 259 ILE ILE A . n A 1 196 ARG 196 260 260 ARG ARG A . n A 1 197 GLU 197 261 261 GLU GLU A . n A 1 198 ILE 198 262 262 ILE ILE A . n A 1 199 LEU 199 263 263 LEU LEU A . n A 1 200 LYS 200 264 264 LYS LYS A . n A 1 201 VAL 201 265 265 VAL VAL A . n A 1 202 ALA 202 266 266 ALA ALA A . n A 1 203 ASP 203 267 267 ASP ASP A . n A 1 204 LYS 204 268 268 LYS LYS A . n A 1 205 LYS 205 269 269 LYS LYS A . n A 1 206 ASP 206 270 270 ASP ASP A . n A 1 207 LEU 207 271 271 LEU LEU A . n A 1 208 SER 208 272 272 SER SER A . n A 1 209 LEU 209 273 273 LEU LEU A . n A 1 210 ALA 210 274 274 ALA ALA A . n A 1 211 LEU 211 275 275 LEU LEU A . n A 1 212 LYS 212 276 276 LYS LYS A . n A 1 213 THR 213 277 277 THR THR A . n A 1 214 SER 214 278 278 SER SER A . n A 1 215 THR 215 279 279 THR THR A . n A 1 216 LYS 216 280 280 LYS LYS A . n A 1 217 ASP 217 281 281 ASP ASP A . n A 1 218 LEU 218 282 282 LEU LEU A . n A 1 219 THR 219 283 283 THR THR A . n A 1 220 ASP 220 284 284 ASP ASP A . n A 1 221 LYS 221 285 285 LYS LYS A . n A 1 222 PHE 222 286 286 PHE PHE A . n A 1 223 LEU 223 287 287 LEU LEU A . n A 1 224 ASN 224 288 288 ASN ASN A . n A 1 225 ASN 225 289 289 ASN ASN A . n A 1 226 MET 226 290 290 MET MET A . n A 1 227 SER 227 291 291 SER SER A . n A 1 228 SER 228 292 292 SER SER A . n A 1 229 ARG 229 293 293 ARG ARG A . n A 1 230 ALA 230 294 294 ALA ALA A . n A 1 231 ALA 231 295 295 ALA ALA A . n A 1 232 GLU 232 296 296 GLU GLU A . n A 1 233 GLN 233 297 297 GLN GLN A . n A 1 234 PHE 234 298 298 PHE PHE A . n A 1 235 VAL 235 299 299 VAL VAL A . n A 1 236 GLU 236 300 300 GLU GLU A . n A 1 237 GLU 237 301 301 GLU GLU A . n A 1 238 MET 238 302 302 MET MET A . n A 1 239 GLN 239 303 303 GLN GLN A . n A 1 240 TYR 240 304 304 TYR TYR A . n A 1 241 LEU 241 305 305 LEU LEU A . n A 1 242 GLY 242 306 306 GLY GLY A . n A 1 243 ALA 243 307 307 ALA ALA A . n A 1 244 VAL 244 308 308 VAL VAL A . n A 1 245 LYS 245 309 309 LYS LYS A . n A 1 246 ILE 246 310 310 ILE ILE A . n A 1 247 LYS 247 311 311 LYS LYS A . n A 1 248 ASP 248 312 312 ASP ASP A . n A 1 249 VAL 249 313 313 VAL VAL A . n A 1 250 ASP 250 314 314 ASP ASP A . n A 1 251 VAL 251 315 315 VAL VAL A . n A 1 252 ALA 252 316 316 ALA ALA A . n A 1 253 GLN 253 317 317 GLN GLN A . n A 1 254 ARG 254 318 318 ARG ARG A . n A 1 255 LYS 255 319 319 LYS LYS A . n A 1 256 ILE 256 320 320 ILE ILE A . n A 1 257 ILE 257 321 321 ILE ILE A . n A 1 258 GLU 258 322 322 GLU GLU A . n A 1 259 ILE 259 323 323 ILE ILE A . n A 1 260 VAL 260 324 324 VAL VAL A . n A 1 261 GLN 261 325 325 GLN GLN A . n A 1 262 SER 262 326 326 SER SER A . n A 1 263 LEU 263 327 327 LEU LEU A . n A 1 264 GLN 264 328 328 GLN GLN A . n A 1 265 GLU 265 329 329 GLU GLU A . n A 1 266 LYS 266 330 330 LYS LYS A . n A 1 267 GLY 267 331 331 GLY GLY A . n A 1 268 VAL 268 332 332 VAL VAL A . n A 1 269 ILE 269 333 333 ILE ILE A . n A 1 270 GLN 270 334 334 GLN GLN A . n A 1 271 THR 271 335 335 THR THR A . n A 1 272 GLY 272 336 ? ? ? A . n A 1 273 GLU 273 337 ? ? ? A . n A 1 274 GLU 274 338 ? ? ? A . n A 1 275 GLU 275 339 ? ? ? A . n A 1 276 ASP 276 340 ? ? ? A . n A 1 277 VAL 277 341 ? ? ? A . n A 1 278 ILE 278 342 ? ? ? A . n A 1 279 GLU 279 343 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-16 2 'Structure model' 1 1 2011-12-14 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -25.7805 _pdbx_refine_tls.origin_y -41.4341 _pdbx_refine_tls.origin_z -0.0558 _pdbx_refine_tls.T[1][1] -0.0135 _pdbx_refine_tls.T[2][2] -0.0188 _pdbx_refine_tls.T[3][3] 0.0981 _pdbx_refine_tls.T[1][2] 0.0127 _pdbx_refine_tls.T[1][3] 0.0252 _pdbx_refine_tls.T[2][3] -0.0230 _pdbx_refine_tls.L[1][1] 1.2003 _pdbx_refine_tls.L[2][2] 0.2777 _pdbx_refine_tls.L[3][3] 0.9604 _pdbx_refine_tls.L[1][2] -0.6427 _pdbx_refine_tls.L[1][3] 0.9392 _pdbx_refine_tls.L[2][3] -0.7195 _pdbx_refine_tls.S[1][1] -0.0300 _pdbx_refine_tls.S[1][2] 0.1691 _pdbx_refine_tls.S[1][3] 0.0733 _pdbx_refine_tls.S[2][1] -0.0134 _pdbx_refine_tls.S[2][2] -0.0654 _pdbx_refine_tls.S[2][3] -0.0889 _pdbx_refine_tls.S[3][1] -0.0102 _pdbx_refine_tls.S[3][2] 0.1778 _pdbx_refine_tls.S[3][3] 0.0954 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 117 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 335 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal marccd 'data collection' . ? 1 PHASER 'model building' . ? 2 REFMAC refinement 5.5.0109 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHASER phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 185 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 27 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.04 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 168 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 168 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.607 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.092 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 118 ? ? -16.57 86.69 2 1 PHE A 119 ? ? -70.58 41.24 3 1 TYR A 121 ? ? -56.83 -7.15 4 1 LEU A 176 ? ? -91.72 -84.11 5 1 GLU A 178 ? ? -99.27 34.26 6 1 SER A 197 ? ? -51.42 16.49 7 1 LEU A 198 ? ? -178.97 -146.44 8 1 VAL A 233 ? ? -143.74 -32.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 203 ? CG1 ? A ILE 139 CG1 2 1 Y 1 A ILE 203 ? CG2 ? A ILE 139 CG2 3 1 Y 1 A ILE 203 ? CD1 ? A ILE 139 CD1 4 1 Y 1 A GLU 204 ? CG ? A GLU 140 CG 5 1 Y 1 A GLU 204 ? CD ? A GLU 140 CD 6 1 Y 1 A GLU 204 ? OE1 ? A GLU 140 OE1 7 1 Y 1 A GLU 204 ? OE2 ? A GLU 140 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 65 ? A HIS 1 2 1 Y 1 A HIS 66 ? A HIS 2 3 1 Y 1 A HIS 67 ? A HIS 3 4 1 Y 1 A HIS 68 ? A HIS 4 5 1 Y 1 A HIS 69 ? A HIS 5 6 1 Y 1 A HIS 70 ? A HIS 6 7 1 Y 1 A HIS 71 ? A HIS 7 8 1 Y 1 A MET 72 ? A MET 8 9 1 Y 1 A ALA 73 ? A ALA 9 10 1 Y 1 A SER 74 ? A SER 10 11 1 Y 1 A MET 75 ? A MET 11 12 1 Y 1 A THR 76 ? A THR 12 13 1 Y 1 A GLY 77 ? A GLY 13 14 1 Y 1 A GLY 78 ? A GLY 14 15 1 Y 1 A GLN 79 ? A GLN 15 16 1 Y 1 A GLN 80 ? A GLN 16 17 1 Y 1 A MET 81 ? A MET 17 18 1 Y 1 A GLY 82 ? A GLY 18 19 1 Y 1 A ARG 83 ? A ARG 19 20 1 Y 1 A GLY 84 ? A GLY 20 21 1 Y 1 A SER 85 ? A SER 21 22 1 Y 1 A LEU 86 ? A LEU 22 23 1 Y 1 A GLU 87 ? A GLU 23 24 1 Y 1 A TYR 88 ? A TYR 24 25 1 Y 1 A ALA 89 ? A ALA 25 26 1 Y 1 A ARG 90 ? A ARG 26 27 1 Y 1 A GLU 91 ? A GLU 27 28 1 Y 1 A LEU 92 ? A LEU 28 29 1 Y 1 A LEU 93 ? A LEU 29 30 1 Y 1 A THR 94 ? A THR 30 31 1 Y 1 A ARG 95 ? A ARG 31 32 1 Y 1 A THR 96 ? A THR 32 33 1 Y 1 A LEU 97 ? A LEU 33 34 1 Y 1 A GLY 98 ? A GLY 34 35 1 Y 1 A SER 99 ? A SER 35 36 1 Y 1 A GLU 100 ? A GLU 36 37 1 Y 1 A GLU 101 ? A GLU 37 38 1 Y 1 A ALA 102 ? A ALA 38 39 1 Y 1 A LYS 103 ? A LYS 39 40 1 Y 1 A LYS 104 ? A LYS 40 41 1 Y 1 A VAL 105 ? A VAL 41 42 1 Y 1 A MET 106 ? A MET 42 43 1 Y 1 A ASP 107 ? A ASP 43 44 1 Y 1 A LYS 108 ? A LYS 44 45 1 Y 1 A LEU 109 ? A LEU 45 46 1 Y 1 A THR 110 ? A THR 46 47 1 Y 1 A LYS 111 ? A LYS 47 48 1 Y 1 A SER 112 ? A SER 48 49 1 Y 1 A LEU 113 ? A LEU 49 50 1 Y 1 A GLN 114 ? A GLN 50 51 1 Y 1 A THR 115 ? A THR 51 52 1 Y 1 A GLN 116 ? A GLN 52 53 1 Y 1 A SER 200 ? A SER 136 54 1 Y 1 A TYR 201 ? A TYR 137 55 1 Y 1 A LYS 202 ? A LYS 138 56 1 Y 1 A GLY 336 ? A GLY 272 57 1 Y 1 A GLU 337 ? A GLU 273 58 1 Y 1 A GLU 338 ? A GLU 274 59 1 Y 1 A GLU 339 ? A GLU 275 60 1 Y 1 A ASP 340 ? A ASP 276 61 1 Y 1 A VAL 341 ? A VAL 277 62 1 Y 1 A ILE 342 ? A ILE 278 63 1 Y 1 A GLU 343 ? A GLU 279 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #