HEADER TRANSCRIPTION REGULATOR 24-NOV-10 3PPB TITLE CRYSTAL STRUCTURE OF A PUTATIVE TETR FAMILY TRANSCRIPTION REGULATOR TITLE 2 (SHEW_3104) FROM SHEWANELLA SP. PV-4 AT 2.10 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TETR FAMILY TRANSCRIPTION REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA LOIHICA; SOURCE 3 ORGANISM_TAXID: 323850; SOURCE 4 STRAIN: PV-4; SOURCE 5 GENE: SHEW_3104; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS DNA-BINDING, HELIX-TURN-HELIX MOTIF, HTH MOTIF, DNA/RNA-BINDING 3- KEYWDS 2 HELICAL BUNDLE FOLD, TETRACYCLIN REPRESSOR-LIKE FOLD, TRANSCRIPTION, KEYWDS 3 TRANSCRIPTION REGULATION, TRANSCRIPTION REGULATOR, STRUCTURAL KEYWDS 4 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 5 STRUCTURE INITIATIVE, PSI EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 20-NOV-24 3PPB 1 REMARK REVDAT 3 01-FEB-23 3PPB 1 REMARK SEQADV LINK REVDAT 2 20-JUL-11 3PPB 1 KEYWDS REVDAT 1 29-DEC-10 3PPB 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE TETR FAMILY TRANSCRIPTION JRNL TITL 2 REGULATOR (SHEW_3104) FROM SHEWANELLA SP. PV-4 AT 2.10 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1152 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.20 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2962 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2098 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2816 REMARK 3 BIN R VALUE (WORKING SET) : 0.2079 REMARK 3 BIN FREE R VALUE : 0.2466 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.93 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 146 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.06430 REMARK 3 B22 (A**2) : 0.54590 REMARK 3 B33 (A**2) : 4.51840 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3201 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4309 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1501 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 87 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 472 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3201 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 403 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3830 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.91 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.77 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.78 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|7 - A|194 } REMARK 3 ORIGIN FOR THE GROUP (A): 34.4551 0.0301 60.5398 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: -0.0458 REMARK 3 T33: -0.1512 T12: 0.0194 REMARK 3 T13: 0.0173 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 1.2852 L22: 0.7012 REMARK 3 L33: 2.2597 L12: 0.0936 REMARK 3 L13: -0.0484 L23: -0.1066 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.2571 S13: -0.0392 REMARK 3 S21: -0.0926 S22: 0.0083 S23: -0.1589 REMARK 3 S31: -0.0098 S32: 0.1730 S33: -0.0579 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|7 - B|194 } REMARK 3 ORIGIN FOR THE GROUP (A): 13.7411 -1.0823 66.2564 REMARK 3 T TENSOR REMARK 3 T11: 0.0815 T22: -0.0921 REMARK 3 T33: -0.1115 T12: 0.0116 REMARK 3 T13: -0.0266 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.9401 L22: 0.3436 REMARK 3 L33: 2.4500 L12: 0.3334 REMARK 3 L13: 1.0408 L23: -0.1279 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.0482 S13: 0.0076 REMARK 3 S21: -0.0374 S22: 0.0207 S23: 0.1159 REMARK 3 S31: -0.0877 S32: -0.0762 S33: -0.0367 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. NCS RESTRAINTS WERE APPLIED USING BUSTER'S REMARK 3 LSSR RESTRAINT REPRESENTATION (-AUTONCS). 3. ATOM RECORD REMARK 3 CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD REMARK 3 CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. CHLORIDE (CL) AND REMARK 3 PEG-400 FRAGMENTS (PEG AND PG4) FROM THE CRYSTALLIZATION REMARK 3 SOLUTION AND 1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTANT HAVE REMARK 3 BEEN MODELED IN THE SOLVENT STRUCTURE. 5. THE SAD PHASES WERE REMARK 3 INCLUDED AS ADDITIONAL REFINEMENT RESTRAINTS. REMARK 4 REMARK 4 3PPB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97903 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.919 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11900 REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.82100 REMARK 200 R SYM FOR SHELL (I) : 0.82100 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 30.0% PEG-400, 0.1M HEPES REMARK 280 PH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.88100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.86700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.02100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.86700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.88100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.02100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUPPORTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIC FORM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 LYS A 6 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 LYS B 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 19 CD OE1 NE2 REMARK 470 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 19 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 76 79.12 -113.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 217 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 399313 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3PPB A 1 194 UNP A3QHM2 A3QHM2_SHELP 1 194 DBREF 3PPB B 1 194 UNP A3QHM2 A3QHM2_SHELP 1 194 SEQADV 3PPB GLY A 0 UNP A3QHM2 EXPRESSION TAG SEQADV 3PPB GLY B 0 UNP A3QHM2 EXPRESSION TAG SEQRES 1 A 195 GLY MSE THR ALA SER SER LYS ARG THR LYS LYS GLN ALA SEQRES 2 A 195 ILE LEU GLU THR ALA LEU GLN LEU PHE VAL SER GLN GLY SEQRES 3 A 195 PHE HIS GLY THR SER THR ALA THR ILE ALA ARG GLU ALA SEQRES 4 A 195 GLY VAL ALA THR GLY THR LEU PHE HIS HIS PHE PRO SER SEQRES 5 A 195 LYS GLU GLN LEU LEU GLU GLN LEU PHE LEU GLY VAL LYS SEQRES 6 A 195 GLN GLU PHE ALA ASP ALA ILE GLN ALA SER VAL SER SER SEQRES 7 A 195 ARG GLY ASP LEU LYS GLN ASP ALA GLU GLN LEU TRP PHE SEQRES 8 A 195 ALA ALA LEU THR TRP ALA MSE ALA ASN PRO LEU LYS GLN SEQRES 9 A 195 ALA PHE PHE GLN LEU TYR SER MSE SER PRO THR VAL GLU SEQRES 10 A 195 GLN SER VAL ARG ASP GLN ALA MSE HIS GLY ILE LEU GLY SEQRES 11 A 195 PHE ILE ALA GLU LEU ILE ARG GLN GLY GLN ALA SER GLY SEQRES 12 A 195 GLU LEU ALA GLU TYR PRO ILE GLU LEU MSE GLN ASP ASN SEQRES 13 A 195 CYS HIS GLY GLN TYR LEU ALA ALA THR ARG TYR PHE VAL SEQRES 14 A 195 ASP HIS PRO GLU ARG TRP GLN GLN ALA HIS GLU ARG SER SEQRES 15 A 195 ALA SER PHE ALA LEU PHE TRP ASN ALA MSE ALA VAL ARG SEQRES 1 B 195 GLY MSE THR ALA SER SER LYS ARG THR LYS LYS GLN ALA SEQRES 2 B 195 ILE LEU GLU THR ALA LEU GLN LEU PHE VAL SER GLN GLY SEQRES 3 B 195 PHE HIS GLY THR SER THR ALA THR ILE ALA ARG GLU ALA SEQRES 4 B 195 GLY VAL ALA THR GLY THR LEU PHE HIS HIS PHE PRO SER SEQRES 5 B 195 LYS GLU GLN LEU LEU GLU GLN LEU PHE LEU GLY VAL LYS SEQRES 6 B 195 GLN GLU PHE ALA ASP ALA ILE GLN ALA SER VAL SER SER SEQRES 7 B 195 ARG GLY ASP LEU LYS GLN ASP ALA GLU GLN LEU TRP PHE SEQRES 8 B 195 ALA ALA LEU THR TRP ALA MSE ALA ASN PRO LEU LYS GLN SEQRES 9 B 195 ALA PHE PHE GLN LEU TYR SER MSE SER PRO THR VAL GLU SEQRES 10 B 195 GLN SER VAL ARG ASP GLN ALA MSE HIS GLY ILE LEU GLY SEQRES 11 B 195 PHE ILE ALA GLU LEU ILE ARG GLN GLY GLN ALA SER GLY SEQRES 12 B 195 GLU LEU ALA GLU TYR PRO ILE GLU LEU MSE GLN ASP ASN SEQRES 13 B 195 CYS HIS GLY GLN TYR LEU ALA ALA THR ARG TYR PHE VAL SEQRES 14 B 195 ASP HIS PRO GLU ARG TRP GLN GLN ALA HIS GLU ARG SER SEQRES 15 B 195 ALA SER PHE ALA LEU PHE TRP ASN ALA MSE ALA VAL ARG MODRES 3PPB MSE A 97 MET SELENOMETHIONINE MODRES 3PPB MSE A 111 MET SELENOMETHIONINE MODRES 3PPB MSE A 124 MET SELENOMETHIONINE MODRES 3PPB MSE A 152 MET SELENOMETHIONINE MODRES 3PPB MSE A 191 MET SELENOMETHIONINE MODRES 3PPB MSE B 97 MET SELENOMETHIONINE MODRES 3PPB MSE B 111 MET SELENOMETHIONINE MODRES 3PPB MSE B 124 MET SELENOMETHIONINE MODRES 3PPB MSE B 152 MET SELENOMETHIONINE MODRES 3PPB MSE B 191 MET SELENOMETHIONINE HET MSE A 97 8 HET MSE A 111 8 HET MSE A 124 8 HET MSE A 152 8 HET MSE A 191 13 HET MSE B 97 8 HET MSE B 111 8 HET MSE B 124 8 HET MSE B 152 8 HET MSE B 191 13 HET CL A 201 1 HET EDO A 203 4 HET EDO A 206 4 HET EDO A 209 4 HET EDO A 210 4 HET EDO A 211 4 HET EDO A 212 4 HET PEG A 215 7 HET PG4 A 216 13 HET PG4 A 218 13 HET CL B 202 1 HET EDO B 204 4 HET EDO B 205 4 HET EDO B 207 4 HET EDO B 208 4 HET PEG B 213 7 HET PEG B 214 7 HET PG4 B 217 13 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 4 EDO 10(C2 H6 O2) FORMUL 10 PEG 3(C4 H10 O3) FORMUL 11 PG4 3(C8 H18 O5) FORMUL 21 HOH *124(H2 O) HELIX 1 1 THR A 8 GLN A 24 1 17 HELIX 2 2 SER A 30 GLY A 39 1 10 HELIX 3 3 ALA A 41 PHE A 49 1 9 HELIX 4 4 SER A 51 SER A 74 1 24 HELIX 5 5 ASP A 80 ASN A 99 1 20 HELIX 6 6 ASN A 99 SER A 110 1 12 HELIX 7 7 GLU A 116 GLY A 126 1 11 HELIX 8 8 LEU A 128 SER A 141 1 14 HELIX 9 9 PRO A 148 HIS A 170 1 23 HELIX 10 10 PRO A 171 GLN A 175 5 5 HELIX 11 11 GLN A 176 ALA A 192 1 17 HELIX 12 12 THR B 8 GLN B 24 1 17 HELIX 13 13 SER B 30 GLY B 39 1 10 HELIX 14 14 ALA B 41 PHE B 49 1 9 HELIX 15 15 SER B 51 SER B 74 1 24 HELIX 16 16 ASP B 80 ASN B 99 1 20 HELIX 17 17 ASN B 99 SER B 110 1 12 HELIX 18 18 GLU B 116 GLY B 126 1 11 HELIX 19 19 LEU B 128 SER B 141 1 14 HELIX 20 20 PRO B 148 HIS B 170 1 23 HELIX 21 21 PRO B 171 GLN B 175 5 5 HELIX 22 22 GLN B 176 ALA B 192 1 17 LINK C ALA A 96 N MSE A 97 1555 1555 1.35 LINK C MSE A 97 N ALA A 98 1555 1555 1.35 LINK C SER A 110 N MSE A 111 1555 1555 1.33 LINK C MSE A 111 N SER A 112 1555 1555 1.34 LINK C ALA A 123 N MSE A 124 1555 1555 1.35 LINK C MSE A 124 N HIS A 125 1555 1555 1.34 LINK C LEU A 151 N MSE A 152 1555 1555 1.34 LINK C MSE A 152 N GLN A 153 1555 1555 1.37 LINK C ALA A 190 N MSE A 191 1555 1555 1.35 LINK C MSE A 191 N ALA A 192 1555 1555 1.36 LINK C ALA B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N ALA B 98 1555 1555 1.34 LINK C SER B 110 N MSE B 111 1555 1555 1.34 LINK C MSE B 111 N SER B 112 1555 1555 1.33 LINK C ALA B 123 N MSE B 124 1555 1555 1.34 LINK C MSE B 124 N HIS B 125 1555 1555 1.35 LINK C LEU B 151 N MSE B 152 1555 1555 1.34 LINK C MSE B 152 N GLN B 153 1555 1555 1.34 LINK C ALA B 190 N MSE B 191 1555 1555 1.33 LINK C MSE B 191 N ALA B 192 1555 1555 1.36 SITE 1 AC1 3 ASN A 99 LEU A 101 LYS A 102 SITE 1 AC2 7 LYS A 64 PHE A 106 SER A 110 LEU A 128 SITE 2 AC2 7 HIS A 157 TYR A 160 PG4 A 216 SITE 1 AC3 6 HIS A 27 THR A 114 PEG A 215 VAL B 22 SITE 2 AC3 6 GLY B 25 LEU B 108 SITE 1 AC4 3 GLN A 107 GLN B 107 MSE B 111 SITE 1 AC5 2 GLU A 66 TRP A 95 SITE 1 AC6 2 GLU A 66 LYS A 102 SITE 1 AC7 5 GLU A 53 GLU A 57 THR A 114 VAL A 115 SITE 2 AC7 5 GLU A 116 SITE 1 AC8 11 GLN A 24 GLY A 25 PHE A 26 HIS A 27 SITE 2 AC8 11 GLY A 28 TYR A 109 EDO A 206 GLY B 25 SITE 3 AC8 11 PHE B 26 HIS B 27 GLY B 28 SITE 1 AC9 7 LEU A 88 ILE A 131 HIS A 157 PHE A 187 SITE 2 AC9 7 MSE A 191 EDO A 203 HOH A 333 SITE 1 BC1 6 PHE A 90 TRP A 174 GLN A 175 ALA A 177 SITE 2 BC1 6 ARG A 180 SER A 181 SITE 1 BC2 3 ASN B 99 LEU B 101 LYS B 102 SITE 1 BC3 3 GLN B 11 GLY B 62 GLU B 66 SITE 1 BC4 7 LYS B 64 PHE B 67 PHE B 106 SER B 110 SITE 2 BC4 7 LEU B 128 HIS B 157 PG4 B 217 SITE 1 BC5 6 GLN A 175 PHE B 46 SER B 51 LYS B 52 SITE 2 BC5 6 GLU B 53 HOH B 290 SITE 1 BC6 6 GLN A 175 ALA A 177 HOH A 235 LYS B 82 SITE 2 BC6 6 ASN B 189 HOH B 300 SITE 1 BC7 5 PHE B 90 ARG B 180 SER B 181 HOH B 315 SITE 2 BC7 5 HOH B 341 SITE 1 BC8 4 SER B 74 ALA B 91 THR B 94 TRP B 95 SITE 1 BC9 6 ILE B 131 GLN B 153 TYR B 160 PHE B 187 SITE 2 BC9 6 EDO B 205 HOH B 334 CRYST1 57.762 60.042 107.734 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017312 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009282 0.00000 CONECT 683 686 CONECT 686 683 687 CONECT 687 686 688 690 CONECT 688 687 689 694 CONECT 689 688 CONECT 690 687 691 CONECT 691 690 692 CONECT 692 691 693 CONECT 693 692 CONECT 694 688 CONECT 798 802 CONECT 802 798 803 CONECT 803 802 804 806 CONECT 804 803 805 810 CONECT 805 804 CONECT 806 803 807 CONECT 807 806 808 CONECT 808 807 809 CONECT 809 808 CONECT 810 804 CONECT 904 907 CONECT 907 904 908 CONECT 908 907 909 911 CONECT 909 908 910 915 CONECT 910 909 CONECT 911 908 912 CONECT 912 911 913 CONECT 913 912 914 CONECT 914 913 CONECT 915 909 CONECT 1128 1134 CONECT 1134 1128 1135 CONECT 1135 1134 1136 1138 CONECT 1136 1135 1137 1142 CONECT 1137 1136 CONECT 1138 1135 1139 CONECT 1139 1138 1140 CONECT 1140 1139 1141 CONECT 1141 1140 CONECT 1142 1136 CONECT 1475 1478 CONECT 1478 1475 1479 1480 CONECT 1479 1478 1481 1483 CONECT 1480 1478 1481 1484 CONECT 1481 1479 1480 1482 1491 CONECT 1482 1481 CONECT 1483 1479 1485 CONECT 1484 1480 1486 CONECT 1485 1483 1487 CONECT 1486 1484 1488 CONECT 1487 1485 1489 CONECT 1488 1486 1490 CONECT 1489 1487 CONECT 1490 1488 CONECT 1491 1481 CONECT 2207 2210 CONECT 2210 2207 2211 CONECT 2211 2210 2212 2214 CONECT 2212 2211 2213 2218 CONECT 2213 2212 CONECT 2214 2211 2215 CONECT 2215 2214 2216 CONECT 2216 2215 2217 CONECT 2217 2216 CONECT 2218 2212 CONECT 2322 2326 CONECT 2326 2322 2327 CONECT 2327 2326 2328 2330 CONECT 2328 2327 2329 2334 CONECT 2329 2328 CONECT 2330 2327 2331 CONECT 2331 2330 2332 CONECT 2332 2331 2333 CONECT 2333 2332 CONECT 2334 2328 CONECT 2431 2434 CONECT 2434 2431 2435 CONECT 2435 2434 2436 2438 CONECT 2436 2435 2437 2442 CONECT 2437 2436 CONECT 2438 2435 2439 CONECT 2439 2438 2440 CONECT 2440 2439 2441 CONECT 2441 2440 CONECT 2442 2436 CONECT 2659 2665 CONECT 2665 2659 2666 CONECT 2666 2665 2667 2669 CONECT 2667 2666 2668 2673 CONECT 2668 2667 CONECT 2669 2666 2670 CONECT 2670 2669 2671 CONECT 2671 2670 2672 CONECT 2672 2671 CONECT 2673 2667 CONECT 2993 2996 CONECT 2996 2993 2997 2998 CONECT 2997 2996 2999 3001 CONECT 2998 2996 2999 3002 CONECT 2999 2997 2998 3000 3009 CONECT 3000 2999 CONECT 3001 2997 3003 CONECT 3002 2998 3004 CONECT 3003 3001 3005 CONECT 3004 3002 3006 CONECT 3005 3003 3007 CONECT 3006 3004 3008 CONECT 3007 3005 CONECT 3008 3006 CONECT 3009 2999 CONECT 3035 3036 3037 CONECT 3036 3035 CONECT 3037 3035 3038 CONECT 3038 3037 CONECT 3039 3040 3041 CONECT 3040 3039 CONECT 3041 3039 3042 CONECT 3042 3041 CONECT 3043 3044 3045 CONECT 3044 3043 CONECT 3045 3043 3046 CONECT 3046 3045 CONECT 3047 3048 3049 CONECT 3048 3047 CONECT 3049 3047 3050 CONECT 3050 3049 CONECT 3051 3052 3053 CONECT 3052 3051 CONECT 3053 3051 3054 CONECT 3054 3053 CONECT 3055 3056 3057 CONECT 3056 3055 CONECT 3057 3055 3058 CONECT 3058 3057 CONECT 3059 3060 3061 CONECT 3060 3059 CONECT 3061 3059 3062 CONECT 3062 3061 3063 CONECT 3063 3062 3064 CONECT 3064 3063 3065 CONECT 3065 3064 CONECT 3066 3067 CONECT 3067 3066 3068 CONECT 3068 3067 3069 CONECT 3069 3068 3070 CONECT 3070 3069 3071 CONECT 3071 3070 3072 CONECT 3072 3071 3073 CONECT 3073 3072 3074 CONECT 3074 3073 3075 CONECT 3075 3074 3076 CONECT 3076 3075 3077 CONECT 3077 3076 3078 CONECT 3078 3077 CONECT 3079 3080 CONECT 3080 3079 3081 CONECT 3081 3080 3082 CONECT 3082 3081 3083 CONECT 3083 3082 3084 CONECT 3084 3083 3085 CONECT 3085 3084 3086 CONECT 3086 3085 3087 CONECT 3087 3086 3088 CONECT 3088 3087 3089 CONECT 3089 3088 3090 CONECT 3090 3089 3091 CONECT 3091 3090 CONECT 3093 3094 3095 CONECT 3094 3093 CONECT 3095 3093 3096 CONECT 3096 3095 CONECT 3097 3098 3099 CONECT 3098 3097 CONECT 3099 3097 3100 CONECT 3100 3099 CONECT 3101 3102 3103 CONECT 3102 3101 CONECT 3103 3101 3104 CONECT 3104 3103 CONECT 3105 3106 3107 CONECT 3106 3105 CONECT 3107 3105 3108 CONECT 3108 3107 CONECT 3109 3110 3111 CONECT 3110 3109 CONECT 3111 3109 3112 CONECT 3112 3111 3113 CONECT 3113 3112 3114 CONECT 3114 3113 3115 CONECT 3115 3114 CONECT 3116 3117 3118 CONECT 3117 3116 CONECT 3118 3116 3119 CONECT 3119 3118 3120 CONECT 3120 3119 3121 CONECT 3121 3120 3122 CONECT 3122 3121 CONECT 3123 3124 CONECT 3124 3123 3125 CONECT 3125 3124 3126 CONECT 3126 3125 3127 CONECT 3127 3126 3128 CONECT 3128 3127 3129 CONECT 3129 3128 3130 CONECT 3130 3129 3131 CONECT 3131 3130 3132 CONECT 3132 3131 3133 CONECT 3133 3132 3134 CONECT 3134 3133 3135 CONECT 3135 3134 MASTER 393 0 28 22 0 0 30 6 3186 2 210 30 END