HEADER TRANSFERASE 24-NOV-10 3PPG TITLE CRYSTAL STRUCTURE OF THE CANDIDA ALBICANS METHIONINE SYNTHASE BY TITLE 2 SURFACE ENTROPY REDUCTION, ALANINE VARIANT WITH ZINC COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE COMPND 3 METHYLTRANSFERASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: COBALAMIN-INDEPENDENT METHIONINE SYNTHASE, METHIONINE COMPND 6 SYNTHASE, VITAMIN-B12 INDEPENDENT ISOZYME; COMPND 7 EC: 2.1.1.14; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 STRAIN: BWP17; SOURCE 6 GENE: CAO19.10083, CAO19.2551, MET6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS COBALAMIN-INDEPENDENT, SURFACE ENTROPY REDUCTION, METHYLTRANSFERASE, KEYWDS 2 METALLOPROTEINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.UBHI,K.KAVANAGH,A.F.MONZINGO,J.D.ROBERTUS REVDAT 3 06-SEP-23 3PPG 1 REMARK SEQADV LINK REVDAT 2 08-NOV-17 3PPG 1 REMARK REVDAT 1 12-OCT-11 3PPG 0 JRNL AUTH D.UBHI,K.L.KAVANAGH,A.F.MONZINGO,J.D.ROBERTUS JRNL TITL STRUCTURE OF CANDIDA ALBICANS METHIONINE SYNTHASE DETERMINED JRNL TITL 2 BY EMPLOYING SURFACE RESIDUE MUTAGENESIS. JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 513 19 2011 JRNL REFN ISSN 0003-9861 JRNL PMID 21689631 JRNL DOI 10.1016/J.ABB.2011.06.002 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 53282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6241 - 5.2702 1.00 2927 170 0.1916 0.2209 REMARK 3 2 5.2702 - 4.1838 1.00 2802 163 0.1477 0.1637 REMARK 3 3 4.1838 - 3.6551 1.00 2766 162 0.1608 0.1869 REMARK 3 4 3.6551 - 3.3210 1.00 2779 139 0.1810 0.2104 REMARK 3 5 3.3210 - 3.0830 1.00 2740 140 0.1885 0.2484 REMARK 3 6 3.0830 - 2.9013 0.99 2746 141 0.1966 0.2445 REMARK 3 7 2.9013 - 2.7560 0.99 2714 124 0.2004 0.2785 REMARK 3 8 2.7560 - 2.6360 0.99 2724 134 0.1898 0.2365 REMARK 3 9 2.6360 - 2.5346 0.98 2661 146 0.1796 0.2450 REMARK 3 10 2.5346 - 2.4471 0.98 2680 130 0.1783 0.2443 REMARK 3 11 2.4471 - 2.3706 0.97 2648 138 0.1698 0.2317 REMARK 3 12 2.3706 - 2.3028 0.97 2636 143 0.1660 0.2400 REMARK 3 13 2.3028 - 2.2422 0.96 2564 152 0.1680 0.2078 REMARK 3 14 2.2422 - 2.1875 0.95 2594 138 0.1673 0.2333 REMARK 3 15 2.1875 - 2.1378 0.96 2584 120 0.1716 0.2165 REMARK 3 16 2.1378 - 2.0923 0.96 2605 133 0.1814 0.2590 REMARK 3 17 2.0923 - 2.0504 0.94 2547 146 0.1903 0.2704 REMARK 3 18 2.0504 - 2.0117 0.93 2530 139 0.1969 0.2522 REMARK 3 19 2.0117 - 1.9800 0.88 2353 124 0.2089 0.2472 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.28 REMARK 3 B_SOL : 43.34 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.62560 REMARK 3 B22 (A**2) : -3.76900 REMARK 3 B33 (A**2) : 6.39460 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5626 REMARK 3 ANGLE : 0.982 7670 REMARK 3 CHIRALITY : 0.066 893 REMARK 3 PLANARITY : 0.004 999 REMARK 3 DIHEDRAL : 12.233 1975 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:140) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0843 -16.2103 11.5076 REMARK 3 T TENSOR REMARK 3 T11: 0.2471 T22: 0.1487 REMARK 3 T33: 0.1538 T12: 0.0147 REMARK 3 T13: -0.0561 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.0775 L22: 1.5130 REMARK 3 L33: 0.7454 L12: 0.2161 REMARK 3 L13: -0.3171 L23: -0.2815 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: 0.2736 S13: 0.2125 REMARK 3 S21: -0.4184 S22: 0.0753 S23: 0.1576 REMARK 3 S31: -0.1094 S32: -0.0449 S33: -0.0221 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 141:399) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5214 -29.0490 25.4587 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1134 REMARK 3 T33: 0.1138 T12: 0.0215 REMARK 3 T13: -0.0013 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.0245 L22: 1.9234 REMARK 3 L33: 1.0909 L12: 0.0232 REMARK 3 L13: -0.1939 L23: -0.0701 REMARK 3 S TENSOR REMARK 3 S11: -0.0112 S12: 0.0277 S13: -0.0425 REMARK 3 S21: -0.0675 S22: -0.0438 S23: -0.0489 REMARK 3 S31: 0.0826 S32: 0.0278 S33: 0.0462 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 400:451) REMARK 3 ORIGIN FOR THE GROUP (A): -39.2651 -7.2040 39.4093 REMARK 3 T TENSOR REMARK 3 T11: 0.2036 T22: 0.3274 REMARK 3 T33: 0.2878 T12: 0.0206 REMARK 3 T13: -0.0046 T23: 0.0913 REMARK 3 L TENSOR REMARK 3 L11: 0.5590 L22: 0.9511 REMARK 3 L33: 0.3342 L12: -0.5797 REMARK 3 L13: -0.2454 L23: 0.1985 REMARK 3 S TENSOR REMARK 3 S11: 0.0815 S12: 0.1366 S13: 0.2024 REMARK 3 S21: 0.0337 S22: -0.1481 S23: 0.2617 REMARK 3 S31: -0.1312 S32: 0.2228 S33: 0.0052 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 452:511) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0768 9.5831 26.9901 REMARK 3 T TENSOR REMARK 3 T11: 0.3331 T22: 0.3579 REMARK 3 T33: 0.5112 T12: 0.0768 REMARK 3 T13: 0.0855 T23: 0.1821 REMARK 3 L TENSOR REMARK 3 L11: 2.1655 L22: 0.2640 REMARK 3 L33: 0.5825 L12: -0.0571 REMARK 3 L13: -0.0313 L23: 0.3910 REMARK 3 S TENSOR REMARK 3 S11: 0.1753 S12: 0.6553 S13: 0.3432 REMARK 3 S21: -0.3713 S22: 0.0649 S23: -0.1911 REMARK 3 S31: -0.3073 S32: 0.0815 S33: -0.2149 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 512:619) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2458 -4.7621 35.8271 REMARK 3 T TENSOR REMARK 3 T11: 0.1842 T22: 0.1988 REMARK 3 T33: 0.2318 T12: 0.0411 REMARK 3 T13: 0.0183 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 1.0446 L22: 0.6716 REMARK 3 L33: 0.1139 L12: 0.0663 REMARK 3 L13: -0.3078 L23: 0.1131 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: -0.0114 S13: 0.2476 REMARK 3 S21: -0.0637 S22: 0.0428 S23: 0.0608 REMARK 3 S31: -0.0491 S32: -0.1060 S33: -0.0938 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 620:638) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5940 -25.4362 34.4970 REMARK 3 T TENSOR REMARK 3 T11: 0.1689 T22: 0.1778 REMARK 3 T33: 0.3634 T12: 0.0015 REMARK 3 T13: 0.0961 T23: -0.0522 REMARK 3 L TENSOR REMARK 3 L11: 1.8081 L22: 0.6823 REMARK 3 L33: 0.3334 L12: -0.8616 REMARK 3 L13: 0.2417 L23: 0.1627 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.2720 S13: -0.1234 REMARK 3 S21: 0.0247 S22: 0.1609 S23: -0.4523 REMARK 3 S31: -0.0986 S32: -0.0491 S33: -0.1748 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 639:767) REMARK 3 ORIGIN FOR THE GROUP (A): -43.7329 -9.0331 23.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.4275 T22: 0.5087 REMARK 3 T33: 0.2848 T12: 0.1497 REMARK 3 T13: -0.1414 T23: -0.0708 REMARK 3 L TENSOR REMARK 3 L11: 3.8160 L22: 2.7602 REMARK 3 L33: 0.5267 L12: -1.1608 REMARK 3 L13: 1.2629 L23: -0.0842 REMARK 3 S TENSOR REMARK 3 S11: 0.4179 S12: 0.9962 S13: -0.3967 REMARK 3 S21: -0.8341 S22: -0.2490 S23: 0.6150 REMARK 3 S31: -0.0042 S32: 0.1383 S33: -0.0572 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97650 REMARK 200 MONOCHROMATOR : ASYMMETRIC CUT SINGLE CRYSTAL SI REMARK 200 (220) REMARK 200 OPTICS : ASYMMETRIC CUT SINGLE CRYSTAL SI REMARK 200 (220) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54885 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.62900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3PPC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM NAI, 27% (W/V) PEG 3350, PH 7.4, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.59700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.41150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.60850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.41150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.59700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.60850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 THR A 106 REMARK 465 ALA A 107 REMARK 465 THR A 108 REMARK 465 GLN A 109 REMARK 465 ALA A 110 REMARK 465 TYR A 660 REMARK 465 SER A 661 REMARK 465 ASP A 662 REMARK 465 PHE A 680 REMARK 465 SER A 681 REMARK 465 LYS A 682 REMARK 465 LYS A 683 REMARK 465 ASP A 684 REMARK 465 ASP A 685 REMARK 465 PRO A 686 REMARK 465 ASN A 687 REMARK 465 TYR A 688 REMARK 465 LEU A 703 REMARK 465 PHE A 704 REMARK 465 ASP A 705 REMARK 465 ILE A 706 REMARK 465 HIS A 707 REMARK 465 SER A 708 REMARK 465 PRO A 709 REMARK 465 LEU A 741 REMARK 465 LYS A 742 REMARK 465 THR A 743 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CE REMARK 470 LYS A 48 CE NZ REMARK 470 LYS A 52 CD CE NZ REMARK 470 GLU A 81 CD OE1 OE2 REMARK 470 LYS A 85 CE NZ REMARK 470 GLN A 102 CG CD OE1 NE2 REMARK 470 VAL A 112 CG1 CG2 REMARK 470 GLU A 139 CG CD OE1 OE2 REMARK 470 LYS A 141 NZ REMARK 470 ASN A 143 CG OD1 ND2 REMARK 470 THR A 144 OG1 CG2 REMARK 470 LYS A 179 CD CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 LEU A 185 CG CD1 CD2 REMARK 470 GLU A 209 CD OE1 OE2 REMARK 470 LYS A 263 NZ REMARK 470 LYS A 321 NZ REMARK 470 GLU A 324 CD OE1 OE2 REMARK 470 LYS A 328 CD CE NZ REMARK 470 LYS A 330 CE NZ REMARK 470 LYS A 351 CE NZ REMARK 470 ASP A 353 CG OD1 OD2 REMARK 470 GLU A 380 OE1 OE2 REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 LYS A 394 CE NZ REMARK 470 ILE A 401 CG1 CG2 CD1 REMARK 470 LYS A 406 CG CD CE NZ REMARK 470 LYS A 433 CD CE NZ REMARK 470 ILE A 446 CD1 REMARK 470 GLN A 451 CG CD OE1 NE2 REMARK 470 THR A 452 OG1 CG2 REMARK 470 LYS A 453 CG CD CE NZ REMARK 470 ASP A 454 CG OD1 OD2 REMARK 470 ILE A 455 CG1 CG2 CD1 REMARK 470 ARG A 456 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 457 CG1 CG2 CD1 REMARK 470 ARG A 459 NE CZ NH1 NH2 REMARK 470 ASN A 460 CG OD1 ND2 REMARK 470 LYS A 461 CE NZ REMARK 470 LYS A 464 CG CD CE NZ REMARK 470 THR A 468 CG2 REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 GLU A 473 CG CD OE1 OE2 REMARK 470 PHE A 475 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 GLU A 481 CD OE1 OE2 REMARK 470 GLU A 489 CG CD OE1 OE2 REMARK 470 ASN A 503 CG OD1 ND2 REMARK 470 ASP A 504 CG OD1 OD2 REMARK 470 ARG A 530 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 545 CD CE NZ REMARK 470 LYS A 550 CE NZ REMARK 470 ILE A 618 CD1 REMARK 470 ARG A 619 CD NE CZ NH1 NH2 REMARK 470 LYS A 628 CG CD CE NZ REMARK 470 ASP A 664 OD1 OD2 REMARK 470 ASN A 666 OD1 ND2 REMARK 470 ILE A 668 CD1 REMARK 470 LYS A 669 CD CE NZ REMARK 470 ILE A 678 CG1 CG2 CD1 REMARK 470 ILE A 689 CG1 CG2 CD1 REMARK 470 GLN A 690 CG CD OE1 NE2 REMARK 470 GLU A 691 CG CD OE1 OE2 REMARK 470 PHE A 692 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 693 OG REMARK 470 GLU A 694 CG CD OE1 OE2 REMARK 470 ILE A 699 CD1 REMARK 470 LEU A 701 CG CD1 CD2 REMARK 470 ARG A 710 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 711 CG1 CG2 CD1 REMARK 470 SER A 713 OG REMARK 470 LYS A 714 CG CD CE NZ REMARK 470 GLN A 715 CG CD OE1 NE2 REMARK 470 GLU A 716 CG CD OE1 OE2 REMARK 470 VAL A 718 CG1 CG2 REMARK 470 SER A 719 OG REMARK 470 ARG A 720 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 721 CG1 CG2 CD1 REMARK 470 GLU A 722 CG CD OE1 OE2 REMARK 470 GLU A 723 CG CD OE1 OE2 REMARK 470 ILE A 724 CG1 CG2 CD1 REMARK 470 LEU A 725 CG CD1 CD2 REMARK 470 LYS A 726 CG CD CE NZ REMARK 470 VAL A 727 CG1 CG2 REMARK 470 TYR A 728 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 732 CG CD CE NZ REMARK 470 PHE A 733 CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 738 CG OD1 OD2 REMARK 470 ARG A 744 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 748 CD OE1 OE2 REMARK 470 VAL A 749 CG1 CG2 REMARK 470 LYS A 750 CG CD CE NZ REMARK 470 GLU A 751 CG CD OE1 OE2 REMARK 470 THR A 754 OG1 CG2 REMARK 470 GLU A 758 CG CD OE1 OE2 REMARK 470 LYS A 761 CG CD CE NZ REMARK 470 LYS A 766 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 66 -62.00 -153.73 REMARK 500 PHE A 123 -130.68 52.65 REMARK 500 PHE A 255 -5.16 80.50 REMARK 500 GLU A 694 51.61 -93.79 REMARK 500 ASN A 697 153.41 -49.50 REMARK 500 VAL A 727 -76.30 -100.04 REMARK 500 LYS A 766 20.70 -76.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 768 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 657 NE2 REMARK 620 2 CYS A 659 SG 106.5 REMARK 620 3 GLU A 679 OE2 105.9 111.6 REMARK 620 4 CYS A 739 SG 91.3 113.5 124.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 768 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PPC RELATED DB: PDB REMARK 900 RELATED ID: 3PPF RELATED DB: PDB REMARK 900 RELATED ID: 3PPH RELATED DB: PDB DBREF 3PPG A 1 767 UNP P82610 METE_CANAL 1 767 SEQADV 3PPG MET A -21 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -20 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -19 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -18 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -17 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -16 UNP P82610 EXPRESSION TAG SEQADV 3PPG HIS A -15 UNP P82610 EXPRESSION TAG SEQADV 3PPG SER A -14 UNP P82610 EXPRESSION TAG SEQADV 3PPG SER A -13 UNP P82610 EXPRESSION TAG SEQADV 3PPG GLY A -12 UNP P82610 EXPRESSION TAG SEQADV 3PPG VAL A -11 UNP P82610 EXPRESSION TAG SEQADV 3PPG ASP A -10 UNP P82610 EXPRESSION TAG SEQADV 3PPG LEU A -9 UNP P82610 EXPRESSION TAG SEQADV 3PPG GLY A -8 UNP P82610 EXPRESSION TAG SEQADV 3PPG THR A -7 UNP P82610 EXPRESSION TAG SEQADV 3PPG GLU A -6 UNP P82610 EXPRESSION TAG SEQADV 3PPG ASN A -5 UNP P82610 EXPRESSION TAG SEQADV 3PPG LEU A -4 UNP P82610 EXPRESSION TAG SEQADV 3PPG TYR A -3 UNP P82610 EXPRESSION TAG SEQADV 3PPG PHE A -2 UNP P82610 EXPRESSION TAG SEQADV 3PPG GLN A -1 UNP P82610 EXPRESSION TAG SEQADV 3PPG SER A 0 UNP P82610 EXPRESSION TAG SEQADV 3PPG ALA A 103 UNP P82610 LYS 103 ENGINEERED MUTATION SEQADV 3PPG ALA A 104 UNP P82610 LYS 104 ENGINEERED MUTATION SEQADV 3PPG ALA A 107 UNP P82610 GLU 107 ENGINEERED MUTATION SEQRES 1 A 789 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 789 GLY THR GLU ASN LEU TYR PHE GLN SER MET VAL GLN SER SEQRES 3 A 789 SER VAL LEU GLY PHE PRO ARG ILE GLY GLY GLN ARG GLU SEQRES 4 A 789 LEU LYS LYS ILE THR GLU ALA TYR TRP SER GLY LYS ALA SEQRES 5 A 789 THR VAL GLU GLU LEU LEU ALA LYS GLY LYS GLU LEU ARG SEQRES 6 A 789 GLU HIS ASN TRP LYS LEU GLN GLN LYS ALA GLY VAL ASP SEQRES 7 A 789 ILE ILE PRO SER ASN ASP PHE SER TYR TYR ASP GLN VAL SEQRES 8 A 789 LEU ASP LEU SER LEU LEU PHE ASN ALA ILE PRO GLU ARG SEQRES 9 A 789 TYR THR LYS PHE ASP LEU ALA PRO ILE ASP VAL LEU PHE SEQRES 10 A 789 ALA MET GLY ARG GLY LEU GLN ALA ALA ALA THR ALA THR SEQRES 11 A 789 GLN ALA ALA VAL ASP VAL THR ALA LEU GLU MET VAL LYS SEQRES 12 A 789 TRP PHE ASP SER ASN TYR HIS TYR VAL ARG PRO THR PHE SEQRES 13 A 789 SER HIS SER THR GLU PHE LYS LEU ASN THR ALA ALA GLY SEQRES 14 A 789 ILE LYS PRO VAL ASP GLU PHE ASN GLU ALA LYS ALA LEU SEQRES 15 A 789 GLY VAL GLN THR ARG PRO VAL ILE LEU GLY PRO VAL SER SEQRES 16 A 789 TYR LEU TYR LEU GLY LYS ALA ASP LYS ASP SER LEU ASP SEQRES 17 A 789 LEU GLU PRO ILE SER LEU LEU PRO LYS ILE LEU PRO VAL SEQRES 18 A 789 TYR LYS GLU LEU LEU GLN LYS LEU LYS GLU ALA GLY ALA SEQRES 19 A 789 GLU GLN VAL GLN ILE ASP GLU PRO VAL LEU VAL LEU ASP SEQRES 20 A 789 LEU PRO GLU ALA VAL GLN SER LYS PHE LYS GLU ALA TYR SEQRES 21 A 789 ASP ALA LEU VAL GLY ALA ASP VAL PRO GLU LEU ILE LEU SEQRES 22 A 789 THR THR TYR PHE GLY ASP VAL ARG PRO ASN LEU LYS ALA SEQRES 23 A 789 ILE GLU ASN LEU PRO VAL ALA GLY PHE HIS PHE ASP PHE SEQRES 24 A 789 VAL ARG VAL PRO GLU GLN LEU ASP GLU VAL ALA SER ILE SEQRES 25 A 789 LEU LYS ASP GLY GLN THR LEU SER ALA GLY VAL VAL ASP SEQRES 26 A 789 GLY ARG ASN ILE TRP LYS THR ASP PHE ALA LYS ALA SER SEQRES 27 A 789 ALA VAL VAL GLN LYS ALA ILE GLU LYS VAL GLY LYS ASP SEQRES 28 A 789 LYS VAL VAL VAL ALA THR SER SER SER LEU LEU HIS THR SEQRES 29 A 789 PRO VAL ASP LEU GLU SER GLU THR LYS LEU ASP ALA VAL SEQRES 30 A 789 ILE LYS ASP TRP PHE SER PHE ALA THR GLN LYS LEU ASP SEQRES 31 A 789 GLU VAL VAL VAL ILE ALA LYS ASN VAL SER GLY GLU ASP SEQRES 32 A 789 VAL SER LYS GLN LEU GLU ALA ASN ALA ALA SER ILE LYS SEQRES 33 A 789 ALA ARG SER GLU SER SER ILE THR ASN ASP PRO LYS VAL SEQRES 34 A 789 GLN GLU ARG LEU THR THR ILE ASN GLU ALA LEU ALA THR SEQRES 35 A 789 ARG LYS ALA ALA PHE PRO GLU ARG LEU THR GLU GLN LYS SEQRES 36 A 789 ALA LYS TYR ASN LEU PRO LEU PHE PRO THR THR THR ILE SEQRES 37 A 789 GLY SER PHE PRO GLN THR LYS ASP ILE ARG ILE ASN ARG SEQRES 38 A 789 ASN LYS PHE ALA LYS GLY GLN ILE THR ALA GLU GLU TYR SEQRES 39 A 789 GLU ALA PHE ILE ASN LYS GLU ILE GLU THR VAL VAL ARG SEQRES 40 A 789 PHE GLN GLU GLU ILE GLY LEU ASP VAL LEU VAL HIS GLY SEQRES 41 A 789 GLU PRO GLU ARG ASN ASP MET VAL GLN TYR PHE GLY GLU SEQRES 42 A 789 GLN LEU ASN GLY PHE ALA PHE THR THR ASN GLY TRP VAL SEQRES 43 A 789 GLN SER TYR GLY SER ARG TYR VAL ARG PRO PRO ILE ILE SEQRES 44 A 789 VAL GLY ASP VAL SER ARG PRO LYS ALA MET THR VAL LYS SEQRES 45 A 789 GLU SER VAL TYR ALA GLN SER ILE THR SER LYS PRO MET SEQRES 46 A 789 LYS GLY MET LEU THR GLY PRO VAL THR ILE LEU ARG TRP SEQRES 47 A 789 SER PHE PRO ARG ASP ASP VAL SER GLY LYS ILE GLN ALA SEQRES 48 A 789 LEU GLN LEU GLY LEU ALA LEU ARG ASP GLU VAL ASN ASP SEQRES 49 A 789 LEU GLU GLY ALA GLY ILE THR VAL ILE GLN VAL ASP GLU SEQRES 50 A 789 PRO ALA ILE ARG GLU GLY LEU PRO LEU ARG ALA GLY LYS SEQRES 51 A 789 GLU ARG SER ASP TYR LEU ASN TRP ALA ALA GLN SER PHE SEQRES 52 A 789 ARG VAL ALA THR SER GLY VAL GLU ASN SER THR GLN ILE SEQRES 53 A 789 HIS SER HIS PHE CYS TYR SER ASP LEU ASP PRO ASN HIS SEQRES 54 A 789 ILE LYS ALA LEU ASP ALA ASP VAL VAL SER ILE GLU PHE SEQRES 55 A 789 SER LYS LYS ASP ASP PRO ASN TYR ILE GLN GLU PHE SER SEQRES 56 A 789 GLU TYR PRO ASN HIS ILE GLY LEU GLY LEU PHE ASP ILE SEQRES 57 A 789 HIS SER PRO ARG ILE PRO SER LYS GLN GLU PHE VAL SER SEQRES 58 A 789 ARG ILE GLU GLU ILE LEU LYS VAL TYR PRO ALA SER LYS SEQRES 59 A 789 PHE TRP VAL ASN PRO ASP CYS GLY LEU LYS THR ARG GLY SEQRES 60 A 789 TRP PRO GLU VAL LYS GLU SER LEU THR ASN MET VAL GLU SEQRES 61 A 789 ALA ALA LYS GLU PHE ARG ALA LYS TYR HET ZN A 768 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *501(H2 O) HELIX 1 1 ARG A 16 SER A 27 1 12 HELIX 2 2 THR A 31 GLY A 54 1 24 HELIX 3 3 ASP A 67 PHE A 76 1 10 HELIX 4 4 PRO A 80 LYS A 85 5 6 HELIX 5 5 ALA A 89 GLY A 100 1 12 HELIX 6 6 ASN A 143 GLY A 147 5 5 HELIX 7 7 ILE A 148 LEU A 160 1 13 HELIX 8 8 GLY A 170 LEU A 177 1 8 HELIX 9 9 LYS A 182 LEU A 185 5 4 HELIX 10 10 GLU A 188 SER A 191 5 4 HELIX 11 11 LEU A 192 GLY A 211 1 20 HELIX 12 12 PRO A 220 LEU A 224 5 5 HELIX 13 13 PRO A 227 SER A 232 1 6 HELIX 14 14 SER A 232 VAL A 242 1 11 HELIX 15 15 VAL A 258 PRO A 260 5 3 HELIX 16 16 ASN A 261 GLU A 266 1 6 HELIX 17 17 VAL A 280 GLU A 282 5 3 HELIX 18 18 GLN A 283 ILE A 290 1 8 HELIX 19 19 ASP A 311 GLY A 327 1 17 HELIX 20 20 SER A 338 THR A 342 5 5 HELIX 21 21 ASP A 345 GLU A 349 5 5 HELIX 22 22 ASP A 353 ASP A 358 1 6 HELIX 23 23 PHE A 362 GLY A 379 1 18 HELIX 24 24 VAL A 382 GLU A 398 1 17 HELIX 25 25 ASP A 404 THR A 413 1 10 HELIX 26 26 GLU A 416 THR A 420 5 5 HELIX 27 27 ALA A 424 ASN A 437 1 14 HELIX 28 28 THR A 452 LYS A 464 1 13 HELIX 29 29 THR A 468 GLY A 491 1 24 HELIX 30 30 VAL A 506 GLU A 511 1 6 HELIX 31 31 THR A 548 ILE A 558 1 11 HELIX 32 32 GLY A 569 TRP A 576 1 8 HELIX 33 33 SER A 584 ALA A 606 1 23 HELIX 34 34 ILE A 618 LEU A 622 5 5 HELIX 35 35 GLY A 627 SER A 646 1 20 HELIX 36 36 ASP A 664 ASP A 672 1 9 HELIX 37 37 ILE A 689 TYR A 695 5 7 HELIX 38 38 SER A 713 LEU A 725 1 13 HELIX 39 39 PRO A 729 SER A 731 5 3 HELIX 40 40 GLY A 745 LYS A 766 1 22 SHEET 1 A 8 SER A 4 SER A 5 0 SHEET 2 A 8 VAL A 331 THR A 335 1 O VAL A 333 N SER A 5 SHEET 3 A 8 THR A 296 VAL A 302 1 N ALA A 299 O VAL A 332 SHEET 4 A 8 GLY A 272 ASP A 276 1 N PHE A 273 O SER A 298 SHEET 5 A 8 GLU A 248 THR A 252 1 N LEU A 251 O GLY A 272 SHEET 6 A 8 GLN A 214 ASP A 218 1 N VAL A 215 O ILE A 250 SHEET 7 A 8 ARG A 165 LEU A 169 1 N PRO A 166 O GLN A 216 SHEET 8 A 8 PRO A 59 SER A 60 1 N SER A 60 O VAL A 167 SHEET 1 B 2 LEU A 101 ALA A 103 0 SHEET 2 B 2 VAL A 112 VAL A 114 -1 O VAL A 114 N LEU A 101 SHEET 1 C 2 MET A 119 LYS A 121 0 SHEET 2 C 2 HIS A 128 VAL A 130 -1 O TYR A 129 N VAL A 120 SHEET 1 D 2 THR A 133 PHE A 134 0 SHEET 2 D 2 LYS A 179 ALA A 180 1 O LYS A 179 N PHE A 134 SHEET 1 E 2 ASN A 514 ALA A 517 0 SHEET 2 E 2 ILE A 536 SER A 542 -1 O ILE A 536 N ALA A 517 SHEET 1 F 2 VAL A 524 TYR A 527 0 SHEET 2 F 2 ARG A 530 VAL A 532 -1 O ARG A 530 N TYR A 527 SHEET 1 G 6 LYS A 564 THR A 568 0 SHEET 2 G 6 VAL A 610 ASP A 614 1 O GLN A 612 N GLY A 565 SHEET 3 G 6 GLN A 653 HIS A 657 1 O GLN A 653 N ILE A 611 SHEET 4 G 6 VAL A 675 ILE A 678 1 O SER A 677 N SER A 656 SHEET 5 G 6 HIS A 698 LEU A 701 1 O GLY A 700 N ILE A 678 SHEET 6 G 6 PHE A 733 VAL A 735 1 O TRP A 734 N ILE A 699 LINK NE2 HIS A 657 ZN ZN A 768 1555 1555 2.33 LINK SG CYS A 659 ZN ZN A 768 1555 1555 2.71 LINK OE2 GLU A 679 ZN ZN A 768 1555 1555 2.32 LINK SG CYS A 739 ZN ZN A 768 1555 1555 2.38 SITE 1 AC1 4 HIS A 657 CYS A 659 GLU A 679 CYS A 739 CRYST1 77.194 99.217 100.823 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012954 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009918 0.00000