data_3PQR # _entry.id 3PQR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PQR pdb_00003pqr 10.2210/pdb3pqr/pdb RCSB RCSB062705 ? ? WWPDB D_1000062705 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-06 5 'Structure model' 2 2 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Non-polymer description' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_molecule_features 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' struct_asym 16 3 'Structure model' struct_conn 17 3 'Structure model' struct_ref_seq_dif 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' chem_comp_atom 22 4 'Structure model' chem_comp_bond 23 4 'Structure model' database_2 24 4 'Structure model' pdbx_initial_refinement_model 25 5 'Structure model' pdbx_entry_details 26 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.formula' 15 3 'Structure model' '_chem_comp.formula_weight' 16 3 'Structure model' '_chem_comp.id' 17 3 'Structure model' '_chem_comp.mon_nstd_flag' 18 3 'Structure model' '_chem_comp.name' 19 3 'Structure model' '_chem_comp.pdbx_synonyms' 20 3 'Structure model' '_chem_comp.type' 21 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 3 'Structure model' '_struct_ref_seq_dif.details' 23 4 'Structure model' '_chem_comp.pdbx_synonyms' 24 4 'Structure model' '_database_2.pdbx_DOI' 25 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PQR _pdbx_database_status.recvd_initial_deposition_date 2010-11-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3PXO _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Choe, H.-W.' 1 'Kim, Y.J.' 2 'Park, J.H.' 3 'Morizumi, T.' 4 'Pai, E.F.' 5 'Krauss, N.' 6 'Hofmann, K.P.' 7 'Scheerer, P.' 8 'Ernst, O.P.' 9 # _citation.id primary _citation.title 'Crystal structure of metarhodopsin II.' _citation.journal_abbrev Nature _citation.journal_volume 471 _citation.page_first 651 _citation.page_last 655 _citation.year 2011 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21389988 _citation.pdbx_database_id_DOI 10.1038/nature09789 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Choe, H.W.' 1 ? primary 'Kim, Y.J.' 2 ? primary 'Park, J.H.' 3 ? primary 'Morizumi, T.' 4 ? primary 'Pai, E.F.' 5 ? primary 'Krauss, N.' 6 ? primary 'Hofmann, K.P.' 7 ? primary 'Scheerer, P.' 8 ? primary 'Ernst, O.P.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Rhodopsin 39031.457 1 ? ? ? ? 2 polymer syn 'Guanine nucleotide-binding protein G(t) subunit alpha-1' 1261.487 1 ? K341L,C347V 'C-terminal peptide (UNP residues 340-350)' ? 3 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 4 branched man 'alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 5 non-polymer syn RETINAL 284.436 1 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 7 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ? 8 non-polymer syn 'PALMITIC ACID' 256.424 1 ? ? ? ? 9 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 10 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 11 water nat water 18.015 23 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Active Metarhodopsin II with all-trans retinal' 2 'Galpha subunit of transducin, Transducin alpha-1 chain' 4 trehalose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT LCCGKNPLGDDEASTTVSKTETSQVAPA ; ;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT LCCGKNPLGDDEASTTVSKTETSQVAPA ; A ? 2 'polypeptide(L)' no no ILENLKDVGLF ILENLKDVGLF B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 RETINAL RET 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 'octyl beta-D-glucopyranoside' BOG 8 'PALMITIC ACID' PLM 9 'SULFATE ION' SO4 10 'ACETATE ION' ACT 11 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 GLY n 1 4 THR n 1 5 GLU n 1 6 GLY n 1 7 PRO n 1 8 ASN n 1 9 PHE n 1 10 TYR n 1 11 VAL n 1 12 PRO n 1 13 PHE n 1 14 SER n 1 15 ASN n 1 16 LYS n 1 17 THR n 1 18 GLY n 1 19 VAL n 1 20 VAL n 1 21 ARG n 1 22 SER n 1 23 PRO n 1 24 PHE n 1 25 GLU n 1 26 ALA n 1 27 PRO n 1 28 GLN n 1 29 TYR n 1 30 TYR n 1 31 LEU n 1 32 ALA n 1 33 GLU n 1 34 PRO n 1 35 TRP n 1 36 GLN n 1 37 PHE n 1 38 SER n 1 39 MET n 1 40 LEU n 1 41 ALA n 1 42 ALA n 1 43 TYR n 1 44 MET n 1 45 PHE n 1 46 LEU n 1 47 LEU n 1 48 ILE n 1 49 MET n 1 50 LEU n 1 51 GLY n 1 52 PHE n 1 53 PRO n 1 54 ILE n 1 55 ASN n 1 56 PHE n 1 57 LEU n 1 58 THR n 1 59 LEU n 1 60 TYR n 1 61 VAL n 1 62 THR n 1 63 VAL n 1 64 GLN n 1 65 HIS n 1 66 LYS n 1 67 LYS n 1 68 LEU n 1 69 ARG n 1 70 THR n 1 71 PRO n 1 72 LEU n 1 73 ASN n 1 74 TYR n 1 75 ILE n 1 76 LEU n 1 77 LEU n 1 78 ASN n 1 79 LEU n 1 80 ALA n 1 81 VAL n 1 82 ALA n 1 83 ASP n 1 84 LEU n 1 85 PHE n 1 86 MET n 1 87 VAL n 1 88 PHE n 1 89 GLY n 1 90 GLY n 1 91 PHE n 1 92 THR n 1 93 THR n 1 94 THR n 1 95 LEU n 1 96 TYR n 1 97 THR n 1 98 SER n 1 99 LEU n 1 100 HIS n 1 101 GLY n 1 102 TYR n 1 103 PHE n 1 104 VAL n 1 105 PHE n 1 106 GLY n 1 107 PRO n 1 108 THR n 1 109 GLY n 1 110 CYS n 1 111 ASN n 1 112 LEU n 1 113 GLU n 1 114 GLY n 1 115 PHE n 1 116 PHE n 1 117 ALA n 1 118 THR n 1 119 LEU n 1 120 GLY n 1 121 GLY n 1 122 GLU n 1 123 ILE n 1 124 ALA n 1 125 LEU n 1 126 TRP n 1 127 SER n 1 128 LEU n 1 129 VAL n 1 130 VAL n 1 131 LEU n 1 132 ALA n 1 133 ILE n 1 134 GLU n 1 135 ARG n 1 136 TYR n 1 137 VAL n 1 138 VAL n 1 139 VAL n 1 140 CYS n 1 141 LYS n 1 142 PRO n 1 143 MET n 1 144 SER n 1 145 ASN n 1 146 PHE n 1 147 ARG n 1 148 PHE n 1 149 GLY n 1 150 GLU n 1 151 ASN n 1 152 HIS n 1 153 ALA n 1 154 ILE n 1 155 MET n 1 156 GLY n 1 157 VAL n 1 158 ALA n 1 159 PHE n 1 160 THR n 1 161 TRP n 1 162 VAL n 1 163 MET n 1 164 ALA n 1 165 LEU n 1 166 ALA n 1 167 CYS n 1 168 ALA n 1 169 ALA n 1 170 PRO n 1 171 PRO n 1 172 LEU n 1 173 VAL n 1 174 GLY n 1 175 TRP n 1 176 SER n 1 177 ARG n 1 178 TYR n 1 179 ILE n 1 180 PRO n 1 181 GLU n 1 182 GLY n 1 183 MET n 1 184 GLN n 1 185 CYS n 1 186 SER n 1 187 CYS n 1 188 GLY n 1 189 ILE n 1 190 ASP n 1 191 TYR n 1 192 TYR n 1 193 THR n 1 194 PRO n 1 195 HIS n 1 196 GLU n 1 197 GLU n 1 198 THR n 1 199 ASN n 1 200 ASN n 1 201 GLU n 1 202 SER n 1 203 PHE n 1 204 VAL n 1 205 ILE n 1 206 TYR n 1 207 MET n 1 208 PHE n 1 209 VAL n 1 210 VAL n 1 211 HIS n 1 212 PHE n 1 213 ILE n 1 214 ILE n 1 215 PRO n 1 216 LEU n 1 217 ILE n 1 218 VAL n 1 219 ILE n 1 220 PHE n 1 221 PHE n 1 222 CYS n 1 223 TYR n 1 224 GLY n 1 225 GLN n 1 226 LEU n 1 227 VAL n 1 228 PHE n 1 229 THR n 1 230 VAL n 1 231 LYS n 1 232 GLU n 1 233 ALA n 1 234 ALA n 1 235 ALA n 1 236 GLN n 1 237 GLN n 1 238 GLN n 1 239 GLU n 1 240 SER n 1 241 ALA n 1 242 THR n 1 243 THR n 1 244 GLN n 1 245 LYS n 1 246 ALA n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 VAL n 1 251 THR n 1 252 ARG n 1 253 MET n 1 254 VAL n 1 255 ILE n 1 256 ILE n 1 257 MET n 1 258 VAL n 1 259 ILE n 1 260 ALA n 1 261 PHE n 1 262 LEU n 1 263 ILE n 1 264 CYS n 1 265 TRP n 1 266 LEU n 1 267 PRO n 1 268 TYR n 1 269 ALA n 1 270 GLY n 1 271 VAL n 1 272 ALA n 1 273 PHE n 1 274 TYR n 1 275 ILE n 1 276 PHE n 1 277 THR n 1 278 HIS n 1 279 GLN n 1 280 GLY n 1 281 SER n 1 282 ASP n 1 283 PHE n 1 284 GLY n 1 285 PRO n 1 286 ILE n 1 287 PHE n 1 288 MET n 1 289 THR n 1 290 ILE n 1 291 PRO n 1 292 ALA n 1 293 PHE n 1 294 PHE n 1 295 ALA n 1 296 LYS n 1 297 THR n 1 298 SER n 1 299 ALA n 1 300 VAL n 1 301 TYR n 1 302 ASN n 1 303 PRO n 1 304 VAL n 1 305 ILE n 1 306 TYR n 1 307 ILE n 1 308 MET n 1 309 MET n 1 310 ASN n 1 311 LYS n 1 312 GLN n 1 313 PHE n 1 314 ARG n 1 315 ASN n 1 316 CYS n 1 317 MET n 1 318 VAL n 1 319 THR n 1 320 THR n 1 321 LEU n 1 322 CYS n 1 323 CYS n 1 324 GLY n 1 325 LYS n 1 326 ASN n 1 327 PRO n 1 328 LEU n 1 329 GLY n 1 330 ASP n 1 331 ASP n 1 332 GLU n 1 333 ALA n 1 334 SER n 1 335 THR n 1 336 THR n 1 337 VAL n 1 338 SER n 1 339 LYS n 1 340 THR n 1 341 GLU n 1 342 THR n 1 343 SER n 1 344 GLN n 1 345 VAL n 1 346 ALA n 1 347 PRO n 1 348 ALA n 2 1 ILE n 2 2 LEU n 2 3 GLU n 2 4 ASN n 2 5 LEU n 2 6 LYS n 2 7 ASP n 2 8 VAL n 2 9 GLY n 2 10 LEU n 2 11 PHE n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name bovine _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Bos taurus' _pdbx_entity_src_syn.organism_common_name bovine _pdbx_entity_src_syn.ncbi_taxonomy_id 9913 _pdbx_entity_src_syn.details 'chemically synthesized' # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 4 4 DGlcpa1-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/1,2,1/[a2122h-1a_1-5]/1-1/a1-b1' WURCS PDB2Glycan 1.1.0 6 4 '[][a-D-Glcp]{[(1+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 4 1 GLC C1 O1 2 GLC O1 HO1 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man BOG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-octylglucoside GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 MET 86 86 86 MET MET A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 CYS 140 140 140 CYS CYS A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 MET 143 143 143 MET MET A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 HIS 152 152 152 HIS HIS A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 CYS 167 167 167 CYS CYS A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 TRP 175 175 175 TRP TRP A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 TYR 178 178 178 TYR TYR A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 GLN 184 184 184 GLN GLN A . n A 1 185 CYS 185 185 185 CYS CYS A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 CYS 187 187 187 CYS CYS A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 TYR 191 191 191 TYR TYR A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 ASN 199 199 199 ASN ASN A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 TYR 206 206 206 TYR TYR A . n A 1 207 MET 207 207 207 MET MET A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 HIS 211 211 211 HIS HIS A . n A 1 212 PHE 212 212 212 PHE PHE A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 ILE 217 217 217 ILE ILE A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 PHE 221 221 221 PHE PHE A . n A 1 222 CYS 222 222 222 CYS CYS A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 VAL 230 230 230 VAL VAL A . n A 1 231 LYS 231 231 231 LYS LYS A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 GLN 236 236 236 GLN GLN A . n A 1 237 GLN 237 237 237 GLN GLN A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 THR 242 242 242 THR THR A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 GLN 244 244 244 GLN GLN A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 ARG 252 252 252 ARG ARG A . n A 1 253 MET 253 253 253 MET MET A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ILE 256 256 256 ILE ILE A . n A 1 257 MET 257 257 257 MET MET A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 PHE 261 261 261 PHE PHE A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 ILE 263 263 263 ILE ILE A . n A 1 264 CYS 264 264 264 CYS CYS A . n A 1 265 TRP 265 265 265 TRP TRP A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 PRO 267 267 267 PRO PRO A . n A 1 268 TYR 268 268 268 TYR TYR A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 GLY 270 270 270 GLY GLY A . n A 1 271 VAL 271 271 271 VAL VAL A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 PHE 273 273 273 PHE PHE A . n A 1 274 TYR 274 274 274 TYR TYR A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 THR 277 277 277 THR THR A . n A 1 278 HIS 278 278 278 HIS HIS A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 GLY 280 280 280 GLY GLY A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 PHE 283 283 283 PHE PHE A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 PRO 285 285 285 PRO PRO A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 PHE 287 287 287 PHE PHE A . n A 1 288 MET 288 288 288 MET MET A . n A 1 289 THR 289 289 289 THR THR A . n A 1 290 ILE 290 290 290 ILE ILE A . n A 1 291 PRO 291 291 291 PRO PRO A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 PHE 293 293 293 PHE PHE A . n A 1 294 PHE 294 294 294 PHE PHE A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 LYS 296 296 296 LYS LYS A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 SER 298 298 298 SER SER A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 VAL 300 300 300 VAL VAL A . n A 1 301 TYR 301 301 301 TYR TYR A . n A 1 302 ASN 302 302 302 ASN ASN A . n A 1 303 PRO 303 303 303 PRO PRO A . n A 1 304 VAL 304 304 304 VAL VAL A . n A 1 305 ILE 305 305 305 ILE ILE A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 ILE 307 307 307 ILE ILE A . n A 1 308 MET 308 308 308 MET MET A . n A 1 309 MET 309 309 309 MET MET A . n A 1 310 ASN 310 310 310 ASN ASN A . n A 1 311 LYS 311 311 311 LYS LYS A . n A 1 312 GLN 312 312 312 GLN GLN A . n A 1 313 PHE 313 313 313 PHE PHE A . n A 1 314 ARG 314 314 314 ARG ARG A . n A 1 315 ASN 315 315 315 ASN ASN A . n A 1 316 CYS 316 316 316 CYS CYS A . n A 1 317 MET 317 317 317 MET MET A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 THR 319 319 319 THR THR A . n A 1 320 THR 320 320 320 THR THR A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 CYS 322 322 322 CYS CYS A . n A 1 323 CYS 323 323 323 CYS CYS A . n A 1 324 GLY 324 324 324 GLY GLY A . n A 1 325 LYS 325 325 325 LYS LYS A . n A 1 326 ASN 326 326 326 ASN ASN A . n A 1 327 PRO 327 327 ? ? ? A . n A 1 328 LEU 328 328 ? ? ? A . n A 1 329 GLY 329 329 ? ? ? A . n A 1 330 ASP 330 330 ? ? ? A . n A 1 331 ASP 331 331 ? ? ? A . n A 1 332 GLU 332 332 ? ? ? A . n A 1 333 ALA 333 333 ? ? ? A . n A 1 334 SER 334 334 ? ? ? A . n A 1 335 THR 335 335 ? ? ? A . n A 1 336 THR 336 336 ? ? ? A . n A 1 337 VAL 337 337 ? ? ? A . n A 1 338 SER 338 338 ? ? ? A . n A 1 339 LYS 339 339 ? ? ? A . n A 1 340 THR 340 340 ? ? ? A . n A 1 341 GLU 341 341 ? ? ? A . n A 1 342 THR 342 342 ? ? ? A . n A 1 343 SER 343 343 ? ? ? A . n A 1 344 GLN 344 344 ? ? ? A . n A 1 345 VAL 345 345 ? ? ? A . n A 1 346 ALA 346 346 ? ? ? A . n A 1 347 PRO 347 347 ? ? ? A . n A 1 348 ALA 348 348 ? ? ? A . n B 2 1 ILE 1 340 340 ILE ILE B . n B 2 2 LEU 2 341 341 LEU LEU B . n B 2 3 GLU 3 342 342 GLU GLU B . n B 2 4 ASN 4 343 343 ASN ASN B . n B 2 5 LEU 5 344 344 LEU LEU B . n B 2 6 LYS 6 345 345 LYS LYS B . n B 2 7 ASP 7 346 346 ASP ASP B . n B 2 8 VAL 8 347 347 VAL VAL B . n B 2 9 GLY 9 348 348 GLY GLY B . n B 2 10 LEU 10 349 349 LEU LEU B . n B 2 11 PHE 11 350 350 PHE PHE B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 A NAG 402 n C 3 NAG 2 C NAG 2 A NAG 403 n C 3 BMA 3 C BMA 3 A BMA 404 n C 3 MAN 4 C MAN 4 A MAN 405 n D 4 GLC 1 D GLC 1 A TRE 1001 n D 4 GLC 2 D GLC 2 A TRE 1001 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 RET 1 401 401 RET RET A . F 6 NAG 1 501 501 NAG NAG A . G 7 BOG 1 601 601 BOG BOG A . H 7 BOG 1 602 602 BOG BOG A . I 8 PLM 1 701 701 PLM PLM A . J 9 SO4 1 801 801 SO4 SO4 A . K 10 ACT 1 901 901 ACT ACT A . L 10 ACT 1 902 902 ACT ACT A . M 11 HOH 1 349 1 HOH HOH A . M 11 HOH 2 350 2 HOH HOH A . M 11 HOH 3 351 3 HOH HOH A . M 11 HOH 4 352 6 HOH HOH A . M 11 HOH 5 353 7 HOH HOH A . M 11 HOH 6 354 8 HOH HOH A . M 11 HOH 7 355 9 HOH HOH A . M 11 HOH 8 356 10 HOH HOH A . M 11 HOH 9 357 11 HOH HOH A . M 11 HOH 10 358 12 HOH HOH A . M 11 HOH 11 359 13 HOH HOH A . M 11 HOH 12 360 14 HOH HOH A . M 11 HOH 13 361 15 HOH HOH A . M 11 HOH 14 362 16 HOH HOH A . M 11 HOH 15 363 17 HOH HOH A . M 11 HOH 16 364 18 HOH HOH A . M 11 HOH 17 365 19 HOH HOH A . M 11 HOH 18 366 20 HOH HOH A . M 11 HOH 19 367 22 HOH HOH A . N 11 HOH 1 4 4 HOH HOH B . N 11 HOH 2 5 5 HOH HOH B . N 11 HOH 3 21 21 HOH HOH B . N 11 HOH 4 23 23 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0072 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 3PQR _cell.length_a 241.550 _cell.length_b 241.550 _cell.length_c 109.870 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PQR _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3PQR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 7.65 _exptl_crystal.density_percent_sol 83.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-05-05 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CRYSTAL - DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.entry_id 3PQR _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 34.865 _reflns.d_resolution_high 2.849 _reflns.number_obs 28448 _reflns.number_all 28448 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 15.9 _reflns.B_iso_Wilson_estimate 68.315 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 3.00 _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs 0.409 _reflns_shell.pdbx_Rsym_value 0.409 _reflns_shell.meanI_over_sigI_obs 2.9 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4086 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3PQR _refine.ls_number_reflns_obs 27000 _refine.ls_number_reflns_all 27000 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.86 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs 100 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.21894 _refine.ls_R_factor_R_work 0.21731 _refine.ls_R_factor_R_free 0.24958 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1422 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -5.27 _refine.aniso_B[2][2] -5.27 _refine.aniso_B[3][3] 7.91 _refine.aniso_B[1][2] -2.64 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3DQB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Anisotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2681 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 177 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 2881 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 34.86 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.256 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.85 _refine_ls_shell.d_res_low 2.922 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.percent_reflns_obs 100 _refine_ls_shell.R_factor_R_free 0.392 _refine_ls_shell.R_factor_R_free_error 0 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1964 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3PQR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3PQR _struct.title 'Crystal structure of Metarhodopsin II in complex with a C-terminal peptide derived from the Galpha subunit of transducin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PQR _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;protein, retinal protein, photoreceptor, active state, chromophore, G-protein coupled receptor, glycoprotein, lipoprotein, palmitate, phosphoprotein, photoreceptor protein, sensory transduction, transducer, transmembrane, vision, signaling protein, G-protein, transducin, Galpha subunit, membrane, receptor, GTP-binding, myristate, nucleotide-binding, G-protein-coupled receptor, rhodopsin, opsin ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 9 ? K N N 10 ? L N N 10 ? M N N 11 ? N N N 11 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP OPSD_BOVIN P02699 1 ;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT LCCGKNPLGDDEASTTVSKTETSQVAPA ; 1 ? 2 UNP GNAT1_BOVIN P04695 2 IKENLKDCGLF 340 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PQR A 1 ? 348 ? P02699 1 ? 348 ? 1 348 2 2 3PQR B 1 ? 11 ? P04695 340 ? 350 ? 340 350 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 3PQR LEU B 2 ? UNP P04695 LYS 341 'engineered mutation' 341 1 2 3PQR VAL B 8 ? UNP P04695 CYS 347 'engineered mutation' 347 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4400 ? 1 MORE -13 ? 1 'SSA (A^2)' 17630 ? 2 'ABSA (A^2)' 11990 ? 2 MORE -42 ? 2 'SSA (A^2)' 32070 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 2 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 109.8700000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? GLY A 18 ? SER A 14 GLY A 18 5 ? 5 HELX_P HELX_P2 2 GLU A 33 ? HIS A 65 ? GLU A 33 HIS A 65 1 ? 33 HELX_P HELX_P3 3 LYS A 66 ? ARG A 69 ? LYS A 66 ARG A 69 5 ? 4 HELX_P HELX_P4 4 THR A 70 ? LEU A 72 ? THR A 70 LEU A 72 5 ? 3 HELX_P HELX_P5 5 ASN A 73 ? GLY A 90 ? ASN A 73 GLY A 90 1 ? 18 HELX_P HELX_P6 6 GLY A 90 ? GLY A 101 ? GLY A 90 GLY A 101 1 ? 12 HELX_P HELX_P7 7 PHE A 105 ? LYS A 141 ? PHE A 105 LYS A 141 1 ? 37 HELX_P HELX_P8 8 GLY A 149 ? ALA A 169 ? GLY A 149 ALA A 169 1 ? 21 HELX_P HELX_P9 9 PRO A 170 ? VAL A 173 ? PRO A 170 VAL A 173 5 ? 4 HELX_P HELX_P10 10 HIS A 195 ? THR A 198 ? HIS A 195 THR A 198 5 ? 4 HELX_P HELX_P11 11 ASN A 199 ? PHE A 212 ? ASN A 199 PHE A 212 1 ? 14 HELX_P HELX_P12 12 PHE A 212 ? GLN A 236 ? PHE A 212 GLN A 236 1 ? 25 HELX_P HELX_P13 13 SER A 240 ? HIS A 278 ? SER A 240 HIS A 278 1 ? 39 HELX_P HELX_P14 14 ILE A 286 ? MET A 288 ? ILE A 286 MET A 288 5 ? 3 HELX_P HELX_P15 15 THR A 289 ? ILE A 307 ? THR A 289 ILE A 307 1 ? 19 HELX_P HELX_P16 16 ASN A 310 ? CYS A 322 ? ASN A 310 CYS A 322 1 ? 13 HELX_P HELX_P17 17 ILE B 1 ? VAL B 8 ? ILE B 340 VAL B 347 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 110 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 110 A CYS 187 1_555 ? ? ? ? ? ? ? 2.047 ? ? covale1 covale one ? A ASN 2 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 2 A NAG 501 1_555 ? ? ? ? ? ? ? 1.334 ? N-Glycosylation covale2 covale one ? A ASN 15 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 15 C NAG 1 1_555 ? ? ? ? ? ? ? 1.334 ? N-Glycosylation covale3 covale one ? A LYS 296 NZ ? ? ? 1_555 E RET . C15 ? ? A LYS 296 A RET 401 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale4 covale one ? A CYS 323 SG ? ? ? 1_555 I PLM . C1 ? ? A CYS 323 A PLM 701 1_555 ? ? ? ? ? ? ? 1.833 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale6 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale7 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale8 covale both ? D GLC . C1 ? ? ? 1_555 D GLC . O1 ? ? D GLC 1 D GLC 2 1_555 ? ? ? ? ? ? ? 1.449 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 15 ? NAG C 1 ? 1_555 ASN A 15 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN A 2 ? NAG A 501 ? 1_555 ASN A 2 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 RET E . ? LYS A 296 ? RET A 401 ? 1_555 LYS A 296 ? 1_555 C15 NZ LYS 1 RET Retinoylation Lipid/lipid-like 4 PLM I . ? CYS A 323 ? PLM A 701 ? 1_555 CYS A 323 ? 1_555 C1 SG CYS 6 PLM Palmitoylation Lipid/lipid-like 5 CYS A 110 ? CYS A 187 ? CYS A 110 ? 1_555 CYS A 187 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 4 ? GLY A 6 ? THR A 4 GLY A 6 A 2 PHE A 9 ? VAL A 11 ? PHE A 9 VAL A 11 B 1 TYR A 178 ? GLU A 181 ? TYR A 178 GLU A 181 B 2 SER A 186 ? ILE A 189 ? SER A 186 ILE A 189 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 4 ? N THR A 4 O VAL A 11 ? O VAL A 11 B 1 2 N GLU A 181 ? N GLU A 181 O SER A 186 ? O SER A 186 # _pdbx_entry_details.entry_id 3PQR _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 29 ? ? -68.79 1.86 2 1 ALA A 32 ? ? -177.22 142.18 3 1 SER A 176 ? ? 50.67 -168.52 4 1 ASN A 199 ? ? 72.23 41.33 5 1 PHE A 212 ? ? -122.98 -60.20 6 1 GLN A 237 ? ? -153.84 36.89 7 1 HIS A 278 ? ? -114.53 62.18 8 1 ILE A 307 ? ? -125.67 -65.45 9 1 CYS A 322 ? ? -98.08 50.72 10 1 CYS A 323 ? ? 63.03 -106.79 # _pdbx_molecule_features.prd_id PRD_900006 _pdbx_molecule_features.name trehalose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900006 _pdbx_molecule.asym_id D # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 15 A ASN 15 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 2 A ASN 2 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 327 ? A PRO 327 2 1 Y 1 A LEU 328 ? A LEU 328 3 1 Y 1 A GLY 329 ? A GLY 329 4 1 Y 1 A ASP 330 ? A ASP 330 5 1 Y 1 A ASP 331 ? A ASP 331 6 1 Y 1 A GLU 332 ? A GLU 332 7 1 Y 1 A ALA 333 ? A ALA 333 8 1 Y 1 A SER 334 ? A SER 334 9 1 Y 1 A THR 335 ? A THR 335 10 1 Y 1 A THR 336 ? A THR 336 11 1 Y 1 A VAL 337 ? A VAL 337 12 1 Y 1 A SER 338 ? A SER 338 13 1 Y 1 A LYS 339 ? A LYS 339 14 1 Y 1 A THR 340 ? A THR 340 15 1 Y 1 A GLU 341 ? A GLU 341 16 1 Y 1 A THR 342 ? A THR 342 17 1 Y 1 A SER 343 ? A SER 343 18 1 Y 1 A GLN 344 ? A GLN 344 19 1 Y 1 A VAL 345 ? A VAL 345 20 1 Y 1 A ALA 346 ? A ALA 346 21 1 Y 1 A PRO 347 ? A PRO 347 22 1 Y 1 A ALA 348 ? A ALA 348 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 BMA C1 C N R 81 BMA C2 C N S 82 BMA C3 C N S 83 BMA C4 C N S 84 BMA C5 C N R 85 BMA C6 C N N 86 BMA O1 O N N 87 BMA O2 O N N 88 BMA O3 O N N 89 BMA O4 O N N 90 BMA O5 O N N 91 BMA O6 O N N 92 BMA H1 H N N 93 BMA H2 H N N 94 BMA H3 H N N 95 BMA H4 H N N 96 BMA H5 H N N 97 BMA H61 H N N 98 BMA H62 H N N 99 BMA HO1 H N N 100 BMA HO2 H N N 101 BMA HO3 H N N 102 BMA HO4 H N N 103 BMA HO6 H N N 104 BOG C1 C N R 105 BOG O1 O N N 106 BOG C2 C N R 107 BOG O2 O N N 108 BOG C3 C N S 109 BOG O3 O N N 110 BOG C4 C N S 111 BOG O4 O N N 112 BOG C5 C N R 113 BOG O5 O N N 114 BOG C6 C N N 115 BOG O6 O N N 116 BOG "C1'" C N N 117 BOG "C2'" C N N 118 BOG "C3'" C N N 119 BOG "C4'" C N N 120 BOG "C5'" C N N 121 BOG "C6'" C N N 122 BOG "C7'" C N N 123 BOG "C8'" C N N 124 BOG H1 H N N 125 BOG H2 H N N 126 BOG HO2 H N N 127 BOG H3 H N N 128 BOG HO3 H N N 129 BOG H4 H N N 130 BOG HO4 H N N 131 BOG H5 H N N 132 BOG H61 H N N 133 BOG H62 H N N 134 BOG HO6 H N N 135 BOG "H1'1" H N N 136 BOG "H1'2" H N N 137 BOG "H2'1" H N N 138 BOG "H2'2" H N N 139 BOG "H3'1" H N N 140 BOG "H3'2" H N N 141 BOG "H4'1" H N N 142 BOG "H4'2" H N N 143 BOG "H5'1" H N N 144 BOG "H5'2" H N N 145 BOG "H6'1" H N N 146 BOG "H6'2" H N N 147 BOG "H7'1" H N N 148 BOG "H7'2" H N N 149 BOG "H8'1" H N N 150 BOG "H8'2" H N N 151 BOG "H8'3" H N N 152 CYS N N N N 153 CYS CA C N R 154 CYS C C N N 155 CYS O O N N 156 CYS CB C N N 157 CYS SG S N N 158 CYS OXT O N N 159 CYS H H N N 160 CYS H2 H N N 161 CYS HA H N N 162 CYS HB2 H N N 163 CYS HB3 H N N 164 CYS HG H N N 165 CYS HXT H N N 166 GLC C1 C N S 167 GLC C2 C N R 168 GLC C3 C N S 169 GLC C4 C N S 170 GLC C5 C N R 171 GLC C6 C N N 172 GLC O1 O N N 173 GLC O2 O N N 174 GLC O3 O N N 175 GLC O4 O N N 176 GLC O5 O N N 177 GLC O6 O N N 178 GLC H1 H N N 179 GLC H2 H N N 180 GLC H3 H N N 181 GLC H4 H N N 182 GLC H5 H N N 183 GLC H61 H N N 184 GLC H62 H N N 185 GLC HO1 H N N 186 GLC HO2 H N N 187 GLC HO3 H N N 188 GLC HO4 H N N 189 GLC HO6 H N N 190 GLN N N N N 191 GLN CA C N S 192 GLN C C N N 193 GLN O O N N 194 GLN CB C N N 195 GLN CG C N N 196 GLN CD C N N 197 GLN OE1 O N N 198 GLN NE2 N N N 199 GLN OXT O N N 200 GLN H H N N 201 GLN H2 H N N 202 GLN HA H N N 203 GLN HB2 H N N 204 GLN HB3 H N N 205 GLN HG2 H N N 206 GLN HG3 H N N 207 GLN HE21 H N N 208 GLN HE22 H N N 209 GLN HXT H N N 210 GLU N N N N 211 GLU CA C N S 212 GLU C C N N 213 GLU O O N N 214 GLU CB C N N 215 GLU CG C N N 216 GLU CD C N N 217 GLU OE1 O N N 218 GLU OE2 O N N 219 GLU OXT O N N 220 GLU H H N N 221 GLU H2 H N N 222 GLU HA H N N 223 GLU HB2 H N N 224 GLU HB3 H N N 225 GLU HG2 H N N 226 GLU HG3 H N N 227 GLU HE2 H N N 228 GLU HXT H N N 229 GLY N N N N 230 GLY CA C N N 231 GLY C C N N 232 GLY O O N N 233 GLY OXT O N N 234 GLY H H N N 235 GLY H2 H N N 236 GLY HA2 H N N 237 GLY HA3 H N N 238 GLY HXT H N N 239 HIS N N N N 240 HIS CA C N S 241 HIS C C N N 242 HIS O O N N 243 HIS CB C N N 244 HIS CG C Y N 245 HIS ND1 N Y N 246 HIS CD2 C Y N 247 HIS CE1 C Y N 248 HIS NE2 N Y N 249 HIS OXT O N N 250 HIS H H N N 251 HIS H2 H N N 252 HIS HA H N N 253 HIS HB2 H N N 254 HIS HB3 H N N 255 HIS HD1 H N N 256 HIS HD2 H N N 257 HIS HE1 H N N 258 HIS HE2 H N N 259 HIS HXT H N N 260 HOH O O N N 261 HOH H1 H N N 262 HOH H2 H N N 263 ILE N N N N 264 ILE CA C N S 265 ILE C C N N 266 ILE O O N N 267 ILE CB C N S 268 ILE CG1 C N N 269 ILE CG2 C N N 270 ILE CD1 C N N 271 ILE OXT O N N 272 ILE H H N N 273 ILE H2 H N N 274 ILE HA H N N 275 ILE HB H N N 276 ILE HG12 H N N 277 ILE HG13 H N N 278 ILE HG21 H N N 279 ILE HG22 H N N 280 ILE HG23 H N N 281 ILE HD11 H N N 282 ILE HD12 H N N 283 ILE HD13 H N N 284 ILE HXT H N N 285 LEU N N N N 286 LEU CA C N S 287 LEU C C N N 288 LEU O O N N 289 LEU CB C N N 290 LEU CG C N N 291 LEU CD1 C N N 292 LEU CD2 C N N 293 LEU OXT O N N 294 LEU H H N N 295 LEU H2 H N N 296 LEU HA H N N 297 LEU HB2 H N N 298 LEU HB3 H N N 299 LEU HG H N N 300 LEU HD11 H N N 301 LEU HD12 H N N 302 LEU HD13 H N N 303 LEU HD21 H N N 304 LEU HD22 H N N 305 LEU HD23 H N N 306 LEU HXT H N N 307 LYS N N N N 308 LYS CA C N S 309 LYS C C N N 310 LYS O O N N 311 LYS CB C N N 312 LYS CG C N N 313 LYS CD C N N 314 LYS CE C N N 315 LYS NZ N N N 316 LYS OXT O N N 317 LYS H H N N 318 LYS H2 H N N 319 LYS HA H N N 320 LYS HB2 H N N 321 LYS HB3 H N N 322 LYS HG2 H N N 323 LYS HG3 H N N 324 LYS HD2 H N N 325 LYS HD3 H N N 326 LYS HE2 H N N 327 LYS HE3 H N N 328 LYS HZ1 H N N 329 LYS HZ2 H N N 330 LYS HZ3 H N N 331 LYS HXT H N N 332 MAN C1 C N S 333 MAN C2 C N S 334 MAN C3 C N S 335 MAN C4 C N S 336 MAN C5 C N R 337 MAN C6 C N N 338 MAN O1 O N N 339 MAN O2 O N N 340 MAN O3 O N N 341 MAN O4 O N N 342 MAN O5 O N N 343 MAN O6 O N N 344 MAN H1 H N N 345 MAN H2 H N N 346 MAN H3 H N N 347 MAN H4 H N N 348 MAN H5 H N N 349 MAN H61 H N N 350 MAN H62 H N N 351 MAN HO1 H N N 352 MAN HO2 H N N 353 MAN HO3 H N N 354 MAN HO4 H N N 355 MAN HO6 H N N 356 MET N N N N 357 MET CA C N S 358 MET C C N N 359 MET O O N N 360 MET CB C N N 361 MET CG C N N 362 MET SD S N N 363 MET CE C N N 364 MET OXT O N N 365 MET H H N N 366 MET H2 H N N 367 MET HA H N N 368 MET HB2 H N N 369 MET HB3 H N N 370 MET HG2 H N N 371 MET HG3 H N N 372 MET HE1 H N N 373 MET HE2 H N N 374 MET HE3 H N N 375 MET HXT H N N 376 NAG C1 C N R 377 NAG C2 C N R 378 NAG C3 C N R 379 NAG C4 C N S 380 NAG C5 C N R 381 NAG C6 C N N 382 NAG C7 C N N 383 NAG C8 C N N 384 NAG N2 N N N 385 NAG O1 O N N 386 NAG O3 O N N 387 NAG O4 O N N 388 NAG O5 O N N 389 NAG O6 O N N 390 NAG O7 O N N 391 NAG H1 H N N 392 NAG H2 H N N 393 NAG H3 H N N 394 NAG H4 H N N 395 NAG H5 H N N 396 NAG H61 H N N 397 NAG H62 H N N 398 NAG H81 H N N 399 NAG H82 H N N 400 NAG H83 H N N 401 NAG HN2 H N N 402 NAG HO1 H N N 403 NAG HO3 H N N 404 NAG HO4 H N N 405 NAG HO6 H N N 406 PHE N N N N 407 PHE CA C N S 408 PHE C C N N 409 PHE O O N N 410 PHE CB C N N 411 PHE CG C Y N 412 PHE CD1 C Y N 413 PHE CD2 C Y N 414 PHE CE1 C Y N 415 PHE CE2 C Y N 416 PHE CZ C Y N 417 PHE OXT O N N 418 PHE H H N N 419 PHE H2 H N N 420 PHE HA H N N 421 PHE HB2 H N N 422 PHE HB3 H N N 423 PHE HD1 H N N 424 PHE HD2 H N N 425 PHE HE1 H N N 426 PHE HE2 H N N 427 PHE HZ H N N 428 PHE HXT H N N 429 PLM C1 C N N 430 PLM O1 O N N 431 PLM O2 O N N 432 PLM C2 C N N 433 PLM C3 C N N 434 PLM C4 C N N 435 PLM C5 C N N 436 PLM C6 C N N 437 PLM C7 C N N 438 PLM C8 C N N 439 PLM C9 C N N 440 PLM CA C N N 441 PLM CB C N N 442 PLM CC C N N 443 PLM CD C N N 444 PLM CE C N N 445 PLM CF C N N 446 PLM CG C N N 447 PLM H H N N 448 PLM H21 H N N 449 PLM H22 H N N 450 PLM H31 H N N 451 PLM H32 H N N 452 PLM H41 H N N 453 PLM H42 H N N 454 PLM H51 H N N 455 PLM H52 H N N 456 PLM H61 H N N 457 PLM H62 H N N 458 PLM H71 H N N 459 PLM H72 H N N 460 PLM H81 H N N 461 PLM H82 H N N 462 PLM H91 H N N 463 PLM H92 H N N 464 PLM HA1 H N N 465 PLM HA2 H N N 466 PLM HB1 H N N 467 PLM HB2 H N N 468 PLM HC1 H N N 469 PLM HC2 H N N 470 PLM HD1 H N N 471 PLM HD2 H N N 472 PLM HE1 H N N 473 PLM HE2 H N N 474 PLM HF1 H N N 475 PLM HF2 H N N 476 PLM HG1 H N N 477 PLM HG2 H N N 478 PLM HG3 H N N 479 PRO N N N N 480 PRO CA C N S 481 PRO C C N N 482 PRO O O N N 483 PRO CB C N N 484 PRO CG C N N 485 PRO CD C N N 486 PRO OXT O N N 487 PRO H H N N 488 PRO HA H N N 489 PRO HB2 H N N 490 PRO HB3 H N N 491 PRO HG2 H N N 492 PRO HG3 H N N 493 PRO HD2 H N N 494 PRO HD3 H N N 495 PRO HXT H N N 496 RET C1 C N N 497 RET C2 C N N 498 RET C3 C N N 499 RET C4 C N N 500 RET C5 C N N 501 RET C6 C N N 502 RET C7 C N N 503 RET C8 C N N 504 RET C9 C N N 505 RET C10 C N N 506 RET C11 C N N 507 RET C12 C N N 508 RET C13 C N N 509 RET C14 C N N 510 RET C15 C N N 511 RET O1 O N N 512 RET C16 C N N 513 RET C17 C N N 514 RET C18 C N N 515 RET C19 C N N 516 RET C20 C N N 517 RET H21 H N N 518 RET H22 H N N 519 RET H31 H N N 520 RET H32 H N N 521 RET H41 H N N 522 RET H42 H N N 523 RET H7 H N N 524 RET H8 H N N 525 RET H10 H N N 526 RET H11 H N N 527 RET H12 H N N 528 RET H14 H N N 529 RET H15 H N N 530 RET H161 H N N 531 RET H162 H N N 532 RET H163 H N N 533 RET H171 H N N 534 RET H172 H N N 535 RET H173 H N N 536 RET H181 H N N 537 RET H182 H N N 538 RET H183 H N N 539 RET H191 H N N 540 RET H192 H N N 541 RET H193 H N N 542 RET H201 H N N 543 RET H202 H N N 544 RET H203 H N N 545 SER N N N N 546 SER CA C N S 547 SER C C N N 548 SER O O N N 549 SER CB C N N 550 SER OG O N N 551 SER OXT O N N 552 SER H H N N 553 SER H2 H N N 554 SER HA H N N 555 SER HB2 H N N 556 SER HB3 H N N 557 SER HG H N N 558 SER HXT H N N 559 SO4 S S N N 560 SO4 O1 O N N 561 SO4 O2 O N N 562 SO4 O3 O N N 563 SO4 O4 O N N 564 THR N N N N 565 THR CA C N S 566 THR C C N N 567 THR O O N N 568 THR CB C N R 569 THR OG1 O N N 570 THR CG2 C N N 571 THR OXT O N N 572 THR H H N N 573 THR H2 H N N 574 THR HA H N N 575 THR HB H N N 576 THR HG1 H N N 577 THR HG21 H N N 578 THR HG22 H N N 579 THR HG23 H N N 580 THR HXT H N N 581 TRP N N N N 582 TRP CA C N S 583 TRP C C N N 584 TRP O O N N 585 TRP CB C N N 586 TRP CG C Y N 587 TRP CD1 C Y N 588 TRP CD2 C Y N 589 TRP NE1 N Y N 590 TRP CE2 C Y N 591 TRP CE3 C Y N 592 TRP CZ2 C Y N 593 TRP CZ3 C Y N 594 TRP CH2 C Y N 595 TRP OXT O N N 596 TRP H H N N 597 TRP H2 H N N 598 TRP HA H N N 599 TRP HB2 H N N 600 TRP HB3 H N N 601 TRP HD1 H N N 602 TRP HE1 H N N 603 TRP HE3 H N N 604 TRP HZ2 H N N 605 TRP HZ3 H N N 606 TRP HH2 H N N 607 TRP HXT H N N 608 TYR N N N N 609 TYR CA C N S 610 TYR C C N N 611 TYR O O N N 612 TYR CB C N N 613 TYR CG C Y N 614 TYR CD1 C Y N 615 TYR CD2 C Y N 616 TYR CE1 C Y N 617 TYR CE2 C Y N 618 TYR CZ C Y N 619 TYR OH O N N 620 TYR OXT O N N 621 TYR H H N N 622 TYR H2 H N N 623 TYR HA H N N 624 TYR HB2 H N N 625 TYR HB3 H N N 626 TYR HD1 H N N 627 TYR HD2 H N N 628 TYR HE1 H N N 629 TYR HE2 H N N 630 TYR HH H N N 631 TYR HXT H N N 632 VAL N N N N 633 VAL CA C N S 634 VAL C C N N 635 VAL O O N N 636 VAL CB C N N 637 VAL CG1 C N N 638 VAL CG2 C N N 639 VAL OXT O N N 640 VAL H H N N 641 VAL H2 H N N 642 VAL HA H N N 643 VAL HB H N N 644 VAL HG11 H N N 645 VAL HG12 H N N 646 VAL HG13 H N N 647 VAL HG21 H N N 648 VAL HG22 H N N 649 VAL HG23 H N N 650 VAL HXT H N N 651 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 BMA C1 C2 sing N N 76 BMA C1 O1 sing N N 77 BMA C1 O5 sing N N 78 BMA C1 H1 sing N N 79 BMA C2 C3 sing N N 80 BMA C2 O2 sing N N 81 BMA C2 H2 sing N N 82 BMA C3 C4 sing N N 83 BMA C3 O3 sing N N 84 BMA C3 H3 sing N N 85 BMA C4 C5 sing N N 86 BMA C4 O4 sing N N 87 BMA C4 H4 sing N N 88 BMA C5 C6 sing N N 89 BMA C5 O5 sing N N 90 BMA C5 H5 sing N N 91 BMA C6 O6 sing N N 92 BMA C6 H61 sing N N 93 BMA C6 H62 sing N N 94 BMA O1 HO1 sing N N 95 BMA O2 HO2 sing N N 96 BMA O3 HO3 sing N N 97 BMA O4 HO4 sing N N 98 BMA O6 HO6 sing N N 99 BOG C1 O1 sing N N 100 BOG C1 C2 sing N N 101 BOG C1 O5 sing N N 102 BOG C1 H1 sing N N 103 BOG O1 "C1'" sing N N 104 BOG C2 O2 sing N N 105 BOG C2 C3 sing N N 106 BOG C2 H2 sing N N 107 BOG O2 HO2 sing N N 108 BOG C3 O3 sing N N 109 BOG C3 C4 sing N N 110 BOG C3 H3 sing N N 111 BOG O3 HO3 sing N N 112 BOG C4 O4 sing N N 113 BOG C4 C5 sing N N 114 BOG C4 H4 sing N N 115 BOG O4 HO4 sing N N 116 BOG C5 O5 sing N N 117 BOG C5 C6 sing N N 118 BOG C5 H5 sing N N 119 BOG C6 O6 sing N N 120 BOG C6 H61 sing N N 121 BOG C6 H62 sing N N 122 BOG O6 HO6 sing N N 123 BOG "C1'" "C2'" sing N N 124 BOG "C1'" "H1'1" sing N N 125 BOG "C1'" "H1'2" sing N N 126 BOG "C2'" "C3'" sing N N 127 BOG "C2'" "H2'1" sing N N 128 BOG "C2'" "H2'2" sing N N 129 BOG "C3'" "C4'" sing N N 130 BOG "C3'" "H3'1" sing N N 131 BOG "C3'" "H3'2" sing N N 132 BOG "C4'" "C5'" sing N N 133 BOG "C4'" "H4'1" sing N N 134 BOG "C4'" "H4'2" sing N N 135 BOG "C5'" "C6'" sing N N 136 BOG "C5'" "H5'1" sing N N 137 BOG "C5'" "H5'2" sing N N 138 BOG "C6'" "C7'" sing N N 139 BOG "C6'" "H6'1" sing N N 140 BOG "C6'" "H6'2" sing N N 141 BOG "C7'" "C8'" sing N N 142 BOG "C7'" "H7'1" sing N N 143 BOG "C7'" "H7'2" sing N N 144 BOG "C8'" "H8'1" sing N N 145 BOG "C8'" "H8'2" sing N N 146 BOG "C8'" "H8'3" sing N N 147 CYS N CA sing N N 148 CYS N H sing N N 149 CYS N H2 sing N N 150 CYS CA C sing N N 151 CYS CA CB sing N N 152 CYS CA HA sing N N 153 CYS C O doub N N 154 CYS C OXT sing N N 155 CYS CB SG sing N N 156 CYS CB HB2 sing N N 157 CYS CB HB3 sing N N 158 CYS SG HG sing N N 159 CYS OXT HXT sing N N 160 GLC C1 C2 sing N N 161 GLC C1 O1 sing N N 162 GLC C1 O5 sing N N 163 GLC C1 H1 sing N N 164 GLC C2 C3 sing N N 165 GLC C2 O2 sing N N 166 GLC C2 H2 sing N N 167 GLC C3 C4 sing N N 168 GLC C3 O3 sing N N 169 GLC C3 H3 sing N N 170 GLC C4 C5 sing N N 171 GLC C4 O4 sing N N 172 GLC C4 H4 sing N N 173 GLC C5 C6 sing N N 174 GLC C5 O5 sing N N 175 GLC C5 H5 sing N N 176 GLC C6 O6 sing N N 177 GLC C6 H61 sing N N 178 GLC C6 H62 sing N N 179 GLC O1 HO1 sing N N 180 GLC O2 HO2 sing N N 181 GLC O3 HO3 sing N N 182 GLC O4 HO4 sing N N 183 GLC O6 HO6 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MAN C1 C2 sing N N 320 MAN C1 O1 sing N N 321 MAN C1 O5 sing N N 322 MAN C1 H1 sing N N 323 MAN C2 C3 sing N N 324 MAN C2 O2 sing N N 325 MAN C2 H2 sing N N 326 MAN C3 C4 sing N N 327 MAN C3 O3 sing N N 328 MAN C3 H3 sing N N 329 MAN C4 C5 sing N N 330 MAN C4 O4 sing N N 331 MAN C4 H4 sing N N 332 MAN C5 C6 sing N N 333 MAN C5 O5 sing N N 334 MAN C5 H5 sing N N 335 MAN C6 O6 sing N N 336 MAN C6 H61 sing N N 337 MAN C6 H62 sing N N 338 MAN O1 HO1 sing N N 339 MAN O2 HO2 sing N N 340 MAN O3 HO3 sing N N 341 MAN O4 HO4 sing N N 342 MAN O6 HO6 sing N N 343 MET N CA sing N N 344 MET N H sing N N 345 MET N H2 sing N N 346 MET CA C sing N N 347 MET CA CB sing N N 348 MET CA HA sing N N 349 MET C O doub N N 350 MET C OXT sing N N 351 MET CB CG sing N N 352 MET CB HB2 sing N N 353 MET CB HB3 sing N N 354 MET CG SD sing N N 355 MET CG HG2 sing N N 356 MET CG HG3 sing N N 357 MET SD CE sing N N 358 MET CE HE1 sing N N 359 MET CE HE2 sing N N 360 MET CE HE3 sing N N 361 MET OXT HXT sing N N 362 NAG C1 C2 sing N N 363 NAG C1 O1 sing N N 364 NAG C1 O5 sing N N 365 NAG C1 H1 sing N N 366 NAG C2 C3 sing N N 367 NAG C2 N2 sing N N 368 NAG C2 H2 sing N N 369 NAG C3 C4 sing N N 370 NAG C3 O3 sing N N 371 NAG C3 H3 sing N N 372 NAG C4 C5 sing N N 373 NAG C4 O4 sing N N 374 NAG C4 H4 sing N N 375 NAG C5 C6 sing N N 376 NAG C5 O5 sing N N 377 NAG C5 H5 sing N N 378 NAG C6 O6 sing N N 379 NAG C6 H61 sing N N 380 NAG C6 H62 sing N N 381 NAG C7 C8 sing N N 382 NAG C7 N2 sing N N 383 NAG C7 O7 doub N N 384 NAG C8 H81 sing N N 385 NAG C8 H82 sing N N 386 NAG C8 H83 sing N N 387 NAG N2 HN2 sing N N 388 NAG O1 HO1 sing N N 389 NAG O3 HO3 sing N N 390 NAG O4 HO4 sing N N 391 NAG O6 HO6 sing N N 392 PHE N CA sing N N 393 PHE N H sing N N 394 PHE N H2 sing N N 395 PHE CA C sing N N 396 PHE CA CB sing N N 397 PHE CA HA sing N N 398 PHE C O doub N N 399 PHE C OXT sing N N 400 PHE CB CG sing N N 401 PHE CB HB2 sing N N 402 PHE CB HB3 sing N N 403 PHE CG CD1 doub Y N 404 PHE CG CD2 sing Y N 405 PHE CD1 CE1 sing Y N 406 PHE CD1 HD1 sing N N 407 PHE CD2 CE2 doub Y N 408 PHE CD2 HD2 sing N N 409 PHE CE1 CZ doub Y N 410 PHE CE1 HE1 sing N N 411 PHE CE2 CZ sing Y N 412 PHE CE2 HE2 sing N N 413 PHE CZ HZ sing N N 414 PHE OXT HXT sing N N 415 PLM C1 O1 sing N N 416 PLM C1 O2 doub N N 417 PLM C1 C2 sing N N 418 PLM O1 H sing N N 419 PLM C2 C3 sing N N 420 PLM C2 H21 sing N N 421 PLM C2 H22 sing N N 422 PLM C3 C4 sing N N 423 PLM C3 H31 sing N N 424 PLM C3 H32 sing N N 425 PLM C4 C5 sing N N 426 PLM C4 H41 sing N N 427 PLM C4 H42 sing N N 428 PLM C5 C6 sing N N 429 PLM C5 H51 sing N N 430 PLM C5 H52 sing N N 431 PLM C6 C7 sing N N 432 PLM C6 H61 sing N N 433 PLM C6 H62 sing N N 434 PLM C7 C8 sing N N 435 PLM C7 H71 sing N N 436 PLM C7 H72 sing N N 437 PLM C8 C9 sing N N 438 PLM C8 H81 sing N N 439 PLM C8 H82 sing N N 440 PLM C9 CA sing N N 441 PLM C9 H91 sing N N 442 PLM C9 H92 sing N N 443 PLM CA CB sing N N 444 PLM CA HA1 sing N N 445 PLM CA HA2 sing N N 446 PLM CB CC sing N N 447 PLM CB HB1 sing N N 448 PLM CB HB2 sing N N 449 PLM CC CD sing N N 450 PLM CC HC1 sing N N 451 PLM CC HC2 sing N N 452 PLM CD CE sing N N 453 PLM CD HD1 sing N N 454 PLM CD HD2 sing N N 455 PLM CE CF sing N N 456 PLM CE HE1 sing N N 457 PLM CE HE2 sing N N 458 PLM CF CG sing N N 459 PLM CF HF1 sing N N 460 PLM CF HF2 sing N N 461 PLM CG HG1 sing N N 462 PLM CG HG2 sing N N 463 PLM CG HG3 sing N N 464 PRO N CA sing N N 465 PRO N CD sing N N 466 PRO N H sing N N 467 PRO CA C sing N N 468 PRO CA CB sing N N 469 PRO CA HA sing N N 470 PRO C O doub N N 471 PRO C OXT sing N N 472 PRO CB CG sing N N 473 PRO CB HB2 sing N N 474 PRO CB HB3 sing N N 475 PRO CG CD sing N N 476 PRO CG HG2 sing N N 477 PRO CG HG3 sing N N 478 PRO CD HD2 sing N N 479 PRO CD HD3 sing N N 480 PRO OXT HXT sing N N 481 RET C1 C2 sing N N 482 RET C1 C6 sing N N 483 RET C1 C16 sing N N 484 RET C1 C17 sing N N 485 RET C2 C3 sing N N 486 RET C2 H21 sing N N 487 RET C2 H22 sing N N 488 RET C3 C4 sing N N 489 RET C3 H31 sing N N 490 RET C3 H32 sing N N 491 RET C4 C5 sing N N 492 RET C4 H41 sing N N 493 RET C4 H42 sing N N 494 RET C5 C6 doub N N 495 RET C5 C18 sing N N 496 RET C6 C7 sing N N 497 RET C7 C8 doub N E 498 RET C7 H7 sing N N 499 RET C8 C9 sing N N 500 RET C8 H8 sing N N 501 RET C9 C10 doub N E 502 RET C9 C19 sing N N 503 RET C10 C11 sing N N 504 RET C10 H10 sing N N 505 RET C11 C12 doub N E 506 RET C11 H11 sing N N 507 RET C12 C13 sing N N 508 RET C12 H12 sing N N 509 RET C13 C14 doub N E 510 RET C13 C20 sing N N 511 RET C14 C15 sing N N 512 RET C14 H14 sing N N 513 RET C15 O1 doub N N 514 RET C15 H15 sing N N 515 RET C16 H161 sing N N 516 RET C16 H162 sing N N 517 RET C16 H163 sing N N 518 RET C17 H171 sing N N 519 RET C17 H172 sing N N 520 RET C17 H173 sing N N 521 RET C18 H181 sing N N 522 RET C18 H182 sing N N 523 RET C18 H183 sing N N 524 RET C19 H191 sing N N 525 RET C19 H192 sing N N 526 RET C19 H193 sing N N 527 RET C20 H201 sing N N 528 RET C20 H202 sing N N 529 RET C20 H203 sing N N 530 SER N CA sing N N 531 SER N H sing N N 532 SER N H2 sing N N 533 SER CA C sing N N 534 SER CA CB sing N N 535 SER CA HA sing N N 536 SER C O doub N N 537 SER C OXT sing N N 538 SER CB OG sing N N 539 SER CB HB2 sing N N 540 SER CB HB3 sing N N 541 SER OG HG sing N N 542 SER OXT HXT sing N N 543 SO4 S O1 doub N N 544 SO4 S O2 doub N N 545 SO4 S O3 sing N N 546 SO4 S O4 sing N N 547 THR N CA sing N N 548 THR N H sing N N 549 THR N H2 sing N N 550 THR CA C sing N N 551 THR CA CB sing N N 552 THR CA HA sing N N 553 THR C O doub N N 554 THR C OXT sing N N 555 THR CB OG1 sing N N 556 THR CB CG2 sing N N 557 THR CB HB sing N N 558 THR OG1 HG1 sing N N 559 THR CG2 HG21 sing N N 560 THR CG2 HG22 sing N N 561 THR CG2 HG23 sing N N 562 THR OXT HXT sing N N 563 TRP N CA sing N N 564 TRP N H sing N N 565 TRP N H2 sing N N 566 TRP CA C sing N N 567 TRP CA CB sing N N 568 TRP CA HA sing N N 569 TRP C O doub N N 570 TRP C OXT sing N N 571 TRP CB CG sing N N 572 TRP CB HB2 sing N N 573 TRP CB HB3 sing N N 574 TRP CG CD1 doub Y N 575 TRP CG CD2 sing Y N 576 TRP CD1 NE1 sing Y N 577 TRP CD1 HD1 sing N N 578 TRP CD2 CE2 doub Y N 579 TRP CD2 CE3 sing Y N 580 TRP NE1 CE2 sing Y N 581 TRP NE1 HE1 sing N N 582 TRP CE2 CZ2 sing Y N 583 TRP CE3 CZ3 doub Y N 584 TRP CE3 HE3 sing N N 585 TRP CZ2 CH2 doub Y N 586 TRP CZ2 HZ2 sing N N 587 TRP CZ3 CH2 sing Y N 588 TRP CZ3 HZ3 sing N N 589 TRP CH2 HH2 sing N N 590 TRP OXT HXT sing N N 591 TYR N CA sing N N 592 TYR N H sing N N 593 TYR N H2 sing N N 594 TYR CA C sing N N 595 TYR CA CB sing N N 596 TYR CA HA sing N N 597 TYR C O doub N N 598 TYR C OXT sing N N 599 TYR CB CG sing N N 600 TYR CB HB2 sing N N 601 TYR CB HB3 sing N N 602 TYR CG CD1 doub Y N 603 TYR CG CD2 sing Y N 604 TYR CD1 CE1 sing Y N 605 TYR CD1 HD1 sing N N 606 TYR CD2 CE2 doub Y N 607 TYR CD2 HD2 sing N N 608 TYR CE1 CZ doub Y N 609 TYR CE1 HE1 sing N N 610 TYR CE2 CZ sing Y N 611 TYR CE2 HE2 sing N N 612 TYR CZ OH sing N N 613 TYR OH HH sing N N 614 TYR OXT HXT sing N N 615 VAL N CA sing N N 616 VAL N H sing N N 617 VAL N H2 sing N N 618 VAL CA C sing N N 619 VAL CA CB sing N N 620 VAL CA HA sing N N 621 VAL C O doub N N 622 VAL C OXT sing N N 623 VAL CB CG1 sing N N 624 VAL CB CG2 sing N N 625 VAL CB HB sing N N 626 VAL CG1 HG11 sing N N 627 VAL CG1 HG12 sing N N 628 VAL CG1 HG13 sing N N 629 VAL CG2 HG21 sing N N 630 VAL CG2 HG22 sing N N 631 VAL CG2 HG23 sing N N 632 VAL OXT HXT sing N N 633 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 4 GLC 1 n 4 GLC 2 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DQB _pdbx_initial_refinement_model.details 'PDB ENTRY 3DQB' # _atom_sites.entry_id 3PQR _atom_sites.fract_transf_matrix[1][1] 0.004140 _atom_sites.fract_transf_matrix[1][2] 0.002390 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004780 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009102 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_