HEADER HYDROLASE, SIGNALING PROTEIN 30-NOV-10 3PS5 TITLE CRYSTAL STRUCTURE OF THE FULL-LENGTH HUMAN PROTEIN TYROSINE TITLE 2 PHOSPHATASE SHP-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEMATOPOIETIC CELL PROTEIN-TYROSINE PHOSPHATASE, PROTEIN- COMPND 5 TYROSINE PHOSPHATASE 1C, PTP-1C, PROTEIN-TYROSINE PHOSPHATASE SHP-1, COMPND 6 SH-PTP1; COMPND 7 EC: 3.1.3.48; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPN6, HCP, PTP1C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7 KEYWDS SH2, PTP, PHOSPHATASE, HYDROLASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,L.LIU,X.SONG,Y.MO,C.KOMMA,H.D.BELLAMY,Z.J.ZHAO,G.W.ZHOU REVDAT 3 06-SEP-23 3PS5 1 REMARK SEQADV REVDAT 2 24-AUG-11 3PS5 1 JRNL VERSN REVDAT 1 20-APR-11 3PS5 0 JRNL AUTH W.WANG,L.LIU,X.SONG,Y.MO,C.KOMMA,H.D.BELLAMY,Z.J.ZHAO, JRNL AUTH 2 G.W.ZHOU JRNL TITL CRYSTAL STRUCTURE OF HUMAN PROTEIN TYROSINE PHOSPHATASE JRNL TITL 2 SHP-1 IN THE OPEN CONFORMATION. JRNL REF J.CELL.BIOCHEM. V. 112 2062 2011 JRNL REFN ISSN 0730-2312 JRNL PMID 21465528 JRNL DOI 10.1002/JCB.23125 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 115.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14036 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 731 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4224 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.39000 REMARK 3 B12 (A**2) : -0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.480 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.373 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.315 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.867 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4338 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5875 ; 0.855 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 4.343 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 218 ;34.494 ;24.358 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 750 ;15.175 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;14.357 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 625 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3329 ; 0.002 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PS5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062750. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CAMD REMARK 200 BEAMLINE : GCPCC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3807 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14036 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 116.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2B3O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 UL OF SHP-1 AT 3.5 MG/ML IN 25MM REMARK 280 TRIS-HCL, BETA-MERCAPTOETHANOL, 1MM EDTA MIXED WITH 2.5 UL OF REMARK 280 1.8M AMMONIUM SULFATE, 0.1M GLYCINE, 0.1M TRIS-HCL, WITH THE REMARK 280 ADDITION OF 0.5 UL 14MM DEOXY BIG CHAP TO FORM THE FINAL DROP., REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 115.95950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.94925 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 26.28400 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 115.95950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 66.94925 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 26.28400 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 115.95950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 66.94925 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 26.28400 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 115.95950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 66.94925 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.28400 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 115.95950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 66.94925 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 26.28400 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 115.95950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 66.94925 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.28400 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 133.89850 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 52.56800 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 133.89850 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 52.56800 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 133.89850 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 52.56800 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 133.89850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 52.56800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 133.89850 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 52.56800 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 133.89850 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 52.56800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -162.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 530 REMARK 465 GLY A 531 REMARK 465 GLN A 532 REMARK 465 GLU A 533 REMARK 465 SER A 534 REMARK 465 GLU A 535 REMARK 465 TYR A 536 REMARK 465 GLY A 537 REMARK 465 ASN A 538 REMARK 465 ILE A 539 REMARK 465 THR A 540 REMARK 465 TYR A 541 REMARK 465 PRO A 542 REMARK 465 PRO A 543 REMARK 465 ALA A 544 REMARK 465 MET A 545 REMARK 465 LYS A 546 REMARK 465 ASN A 547 REMARK 465 ALA A 548 REMARK 465 HIS A 549 REMARK 465 ALA A 550 REMARK 465 LYS A 551 REMARK 465 ALA A 552 REMARK 465 SER A 553 REMARK 465 ARG A 554 REMARK 465 THR A 555 REMARK 465 SER A 556 REMARK 465 SER A 557 REMARK 465 LYS A 558 REMARK 465 HIS A 559 REMARK 465 LYS A 560 REMARK 465 GLU A 561 REMARK 465 ASP A 562 REMARK 465 VAL A 563 REMARK 465 TYR A 564 REMARK 465 GLU A 565 REMARK 465 ASN A 566 REMARK 465 LEU A 567 REMARK 465 HIS A 568 REMARK 465 THR A 569 REMARK 465 LYS A 570 REMARK 465 ASN A 571 REMARK 465 LYS A 572 REMARK 465 ARG A 573 REMARK 465 GLU A 574 REMARK 465 GLU A 575 REMARK 465 LYS A 576 REMARK 465 VAL A 577 REMARK 465 LYS A 578 REMARK 465 LYS A 579 REMARK 465 GLN A 580 REMARK 465 ARG A 581 REMARK 465 SER A 582 REMARK 465 ALA A 583 REMARK 465 ASP A 584 REMARK 465 LYS A 585 REMARK 465 GLU A 586 REMARK 465 LYS A 587 REMARK 465 SER A 588 REMARK 465 LYS A 589 REMARK 465 GLY A 590 REMARK 465 SER A 591 REMARK 465 LEU A 592 REMARK 465 LYS A 593 REMARK 465 ARG A 594 REMARK 465 LYS A 595 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 2 156.75 69.85 REMARK 500 ARG A 3 58.88 -93.23 REMARK 500 TRP A 4 -165.50 -74.11 REMARK 500 PHE A 5 129.85 67.37 REMARK 500 ASP A 8 78.94 -112.25 REMARK 500 VAL A 23 -167.67 -104.81 REMARK 500 ASN A 35 75.45 58.01 REMARK 500 LEU A 63 45.14 -106.81 REMARK 500 TYR A 64 76.02 50.66 REMARK 500 ASP A 88 -157.87 -82.40 REMARK 500 LYS A 97 -83.59 -84.78 REMARK 500 HIS A 114 97.48 -69.83 REMARK 500 ALA A 156 -130.18 -118.86 REMARK 500 GLU A 200 -74.49 -76.86 REMARK 500 GLU A 201 141.24 87.53 REMARK 500 LYS A 233 54.36 -91.53 REMARK 500 ASP A 238 146.36 76.01 REMARK 500 LYS A 241 93.03 -34.44 REMARK 500 ALA A 242 156.11 73.71 REMARK 500 LYS A 257 41.68 -101.26 REMARK 500 SER A 294 -38.65 68.63 REMARK 500 LEU A 311 47.88 -85.37 REMARK 500 ASN A 402 -125.00 -96.21 REMARK 500 LEU A 405 42.78 -97.22 REMARK 500 SER A 453 -101.42 -133.27 REMARK 500 ILE A 457 -55.88 -130.99 REMARK 500 VAL A 499 105.37 70.72 REMARK 500 GLN A 527 -86.19 54.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 596 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 597 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 598 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 599 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 600 DBREF 3PS5 A 1 595 UNP P29350 PTN6_HUMAN 1 595 SEQADV 3PS5 SER A 453 UNP P29350 CYS 453 ENGINEERED MUTATION SEQRES 1 A 595 MET VAL ARG TRP PHE HIS ARG ASP LEU SER GLY LEU ASP SEQRES 2 A 595 ALA GLU THR LEU LEU LYS GLY ARG GLY VAL HIS GLY SER SEQRES 3 A 595 PHE LEU ALA ARG PRO SER ARG LYS ASN GLN GLY ASP PHE SEQRES 4 A 595 SER LEU SER VAL ARG VAL GLY ASP GLN VAL THR HIS ILE SEQRES 5 A 595 ARG ILE GLN ASN SER GLY ASP PHE TYR ASP LEU TYR GLY SEQRES 6 A 595 GLY GLU LYS PHE ALA THR LEU THR GLU LEU VAL GLU TYR SEQRES 7 A 595 TYR THR GLN GLN GLN GLY VAL LEU GLN ASP ARG ASP GLY SEQRES 8 A 595 THR ILE ILE HIS LEU LYS TYR PRO LEU ASN CYS SER ASP SEQRES 9 A 595 PRO THR SER GLU ARG TRP TYR HIS GLY HIS MET SER GLY SEQRES 10 A 595 GLY GLN ALA GLU THR LEU LEU GLN ALA LYS GLY GLU PRO SEQRES 11 A 595 TRP THR PHE LEU VAL ARG GLU SER LEU SER GLN PRO GLY SEQRES 12 A 595 ASP PHE VAL LEU SER VAL LEU SER ASP GLN PRO LYS ALA SEQRES 13 A 595 GLY PRO GLY SER PRO LEU ARG VAL THR HIS ILE LYS VAL SEQRES 14 A 595 MET CYS GLU GLY GLY ARG TYR THR VAL GLY GLY LEU GLU SEQRES 15 A 595 THR PHE ASP SER LEU THR ASP LEU VAL GLU HIS PHE LYS SEQRES 16 A 595 LYS THR GLY ILE GLU GLU ALA SER GLY ALA PHE VAL TYR SEQRES 17 A 595 LEU ARG GLN PRO TYR TYR ALA THR ARG VAL ASN ALA ALA SEQRES 18 A 595 ASP ILE GLU ASN ARG VAL LEU GLU LEU ASN LYS LYS GLN SEQRES 19 A 595 GLU SER GLU ASP THR ALA LYS ALA GLY PHE TRP GLU GLU SEQRES 20 A 595 PHE GLU SER LEU GLN LYS GLN GLU VAL LYS ASN LEU HIS SEQRES 21 A 595 GLN ARG LEU GLU GLY GLN ARG PRO GLU ASN LYS GLY LYS SEQRES 22 A 595 ASN ARG TYR LYS ASN ILE LEU PRO PHE ASP HIS SER ARG SEQRES 23 A 595 VAL ILE LEU GLN GLY ARG ASP SER ASN ILE PRO GLY SER SEQRES 24 A 595 ASP TYR ILE ASN ALA ASN TYR ILE LYS ASN GLN LEU LEU SEQRES 25 A 595 GLY PRO ASP GLU ASN ALA LYS THR TYR ILE ALA SER GLN SEQRES 26 A 595 GLY CYS LEU GLU ALA THR VAL ASN ASP PHE TRP GLN MET SEQRES 27 A 595 ALA TRP GLN GLU ASN SER ARG VAL ILE VAL MET THR THR SEQRES 28 A 595 ARG GLU VAL GLU LYS GLY ARG ASN LYS CYS VAL PRO TYR SEQRES 29 A 595 TRP PRO GLU VAL GLY MET GLN ARG ALA TYR GLY PRO TYR SEQRES 30 A 595 SER VAL THR ASN CYS GLY GLU HIS ASP THR THR GLU TYR SEQRES 31 A 595 LYS LEU ARG THR LEU GLN VAL SER PRO LEU ASP ASN GLY SEQRES 32 A 595 ASP LEU ILE ARG GLU ILE TRP HIS TYR GLN TYR LEU SER SEQRES 33 A 595 TRP PRO ASP HIS GLY VAL PRO SER GLU PRO GLY GLY VAL SEQRES 34 A 595 LEU SER PHE LEU ASP GLN ILE ASN GLN ARG GLN GLU SER SEQRES 35 A 595 LEU PRO HIS ALA GLY PRO ILE ILE VAL HIS SER SER ALA SEQRES 36 A 595 GLY ILE GLY ARG THR GLY THR ILE ILE VAL ILE ASP MET SEQRES 37 A 595 LEU MET GLU ASN ILE SER THR LYS GLY LEU ASP CYS ASP SEQRES 38 A 595 ILE ASP ILE GLN LYS THR ILE GLN MET VAL ARG ALA GLN SEQRES 39 A 595 ARG SER GLY MET VAL GLN THR GLU ALA GLN TYR LYS PHE SEQRES 40 A 595 ILE TYR VAL ALA ILE ALA GLN PHE ILE GLU THR THR LYS SEQRES 41 A 595 LYS LYS LEU GLU VAL LEU GLN SER GLN LYS GLY GLN GLU SEQRES 42 A 595 SER GLU TYR GLY ASN ILE THR TYR PRO PRO ALA MET LYS SEQRES 43 A 595 ASN ALA HIS ALA LYS ALA SER ARG THR SER SER LYS HIS SEQRES 44 A 595 LYS GLU ASP VAL TYR GLU ASN LEU HIS THR LYS ASN LYS SEQRES 45 A 595 ARG GLU GLU LYS VAL LYS LYS GLN ARG SER ALA ASP LYS SEQRES 46 A 595 GLU LYS SER LYS GLY SER LEU LYS ARG LYS HET SO4 A 596 5 HET SO4 A 597 5 HET SO4 A 598 5 HET SO4 A 599 5 HET SO4 A 600 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 HOH *17(H2 O) HELIX 1 1 SER A 10 GLY A 22 1 13 HELIX 2 2 THR A 71 GLN A 81 1 11 HELIX 3 3 SER A 116 GLY A 128 1 13 HELIX 4 4 CYS A 171 ARG A 175 5 5 HELIX 5 5 SER A 186 THR A 197 1 12 HELIX 6 6 ASP A 222 LYS A 232 1 11 HELIX 7 7 ALA A 242 LYS A 253 1 12 HELIX 8 8 GLN A 254 ASN A 258 5 5 HELIX 9 9 LEU A 263 ASN A 274 5 12 HELIX 10 10 THR A 331 GLU A 342 1 12 HELIX 11 11 PRO A 426 LEU A 443 1 18 HELIX 12 12 ILE A 457 GLY A 477 1 21 HELIX 13 13 ASP A 483 ALA A 493 1 11 HELIX 14 14 THR A 501 LYS A 521 1 21 SHEET 1 A 4 PHE A 27 PRO A 31 0 SHEET 2 A 4 PHE A 39 VAL A 45 -1 O SER A 40 N ARG A 30 SHEET 3 A 4 GLN A 48 ASN A 56 -1 O ILE A 54 N PHE A 39 SHEET 4 A 4 TYR A 61 ASP A 62 -1 O ASP A 62 N GLN A 55 SHEET 1 B 4 TYR A 111 GLY A 113 0 SHEET 2 B 4 THR A 132 GLU A 137 1 O GLU A 137 N GLY A 113 SHEET 3 B 4 PHE A 145 PRO A 154 -1 O SER A 148 N LEU A 134 SHEET 4 B 4 LEU A 162 VAL A 169 -1 O ILE A 167 N LEU A 147 SHEET 1 C 3 TYR A 111 GLY A 113 0 SHEET 2 C 3 THR A 132 GLU A 137 1 O GLU A 137 N GLY A 113 SHEET 3 C 3 GLN A 211 PRO A 212 1 O GLN A 211 N PHE A 133 SHEET 1 D 2 VAL A 218 ASN A 219 0 SHEET 2 D 2 ASP A 481 ILE A 482 -1 O ILE A 482 N VAL A 218 SHEET 1 E 9 ARG A 286 ILE A 288 0 SHEET 2 E 9 TYR A 301 LYS A 308 -1 O ALA A 304 N VAL A 287 SHEET 3 E 9 THR A 320 SER A 324 -1 O TYR A 321 N ILE A 307 SHEET 4 E 9 ILE A 449 HIS A 452 1 O VAL A 451 N ILE A 322 SHEET 5 E 9 VAL A 346 MET A 349 1 N VAL A 348 O ILE A 450 SHEET 6 E 9 ARG A 407 TYR A 414 1 O TYR A 412 N ILE A 347 SHEET 7 E 9 TYR A 390 PRO A 399 -1 N ARG A 393 O HIS A 411 SHEET 8 E 9 TYR A 377 ASP A 386 -1 N SER A 378 O SER A 398 SHEET 9 E 9 GLN A 371 TYR A 374 -1 N TYR A 374 O TYR A 377 SITE 1 AC1 4 ARG A 136 SER A 138 LEU A 139 SER A 140 SITE 1 AC2 2 ARG A 21 LYS A 520 SITE 1 AC3 4 THR A 106 SER A 107 GLU A 108 THR A 188 SITE 1 AC4 8 SER A 453 SER A 454 ALA A 455 GLY A 456 SITE 2 AC4 8 ILE A 457 GLY A 458 ARG A 459 THR A 460 SITE 1 AC5 5 ARG A 30 SER A 32 ARG A 33 LYS A 34 SITE 2 AC5 5 SER A 40 CRYST1 231.919 231.919 78.852 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004312 0.002489 0.000000 0.00000 SCALE2 0.000000 0.004979 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012682 0.00000