HEADER LIGASE 02-DEC-10 3PT3 TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL LOBE OF THE HUMAN UBR5 HECT DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE UBR5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL LOBE OF HECT DOMAIN; COMPND 5 SYNONYM: E3 UBIQUITIN-PROTEIN LIGASE, HECT DOMAIN-CONTAINING 1, COMPND 6 HYPERPLASTIC DISCS PROTEIN HOMOLOG, HHYD, PROGESTIN-INDUCED PROTEIN; COMPND 7 EC: 6.3.2.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBR5, EDD, EDD1, HYD, KIAA0896; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS UBR5, EDD, HHYD, MIXED ALPHA-BETA FOLD, UBIQUITIN LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR E.MATTA-CAMACHO,G.KOZLOV,M.MENADE,K.GEHRING REVDAT 4 06-SEP-23 3PT3 1 SEQADV REVDAT 3 17-OCT-12 3PT3 1 JRNL REVDAT 2 10-OCT-12 3PT3 1 REVDAT 1 25-JAN-12 3PT3 0 JRNL AUTH E.MATTA-CAMACHO,G.KOZLOV,M.MENADE,K.GEHRING JRNL TITL STRUCTURE OF THE HECT C-LOBE OF THE UBR5 E3 UBIQUITIN JRNL TITL 2 LIGASE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 68 1158 2012 JRNL REFN ESSN 1744-3091 JRNL PMID 23027739 JRNL DOI 10.1107/S1744309112036937 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 11665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 627 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 761 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.05000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.001 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1546 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2099 ; 1.296 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 185 ; 5.444 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 65 ;34.587 ;24.154 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 278 ;18.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;17.614 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 238 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1132 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 639 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1045 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 64 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.168 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.190 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 982 ; 0.514 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1529 ; 0.860 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 683 ; 1.414 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 568 ; 2.173 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2693 A 2710 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8120 -12.1285 -10.5271 REMARK 3 T TENSOR REMARK 3 T11: -0.0259 T22: 0.0489 REMARK 3 T33: 0.0698 T12: -0.0017 REMARK 3 T13: 0.0066 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.2471 L22: 1.5927 REMARK 3 L33: 3.1274 L12: -0.4649 REMARK 3 L13: 0.3327 L23: 1.9528 REMARK 3 S TENSOR REMARK 3 S11: 0.0750 S12: -0.0384 S13: 0.0207 REMARK 3 S21: 0.0351 S22: -0.2286 S23: 0.2553 REMARK 3 S31: 0.1331 S32: -0.3480 S33: 0.1536 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2711 A 2734 REMARK 3 ORIGIN FOR THE GROUP (A): -13.2895 -16.0397 -26.4134 REMARK 3 T TENSOR REMARK 3 T11: 0.0801 T22: 0.0229 REMARK 3 T33: 0.0115 T12: 0.0397 REMARK 3 T13: -0.0342 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.9286 L22: 5.0085 REMARK 3 L33: 3.3517 L12: 0.7084 REMARK 3 L13: 0.0825 L23: 2.4393 REMARK 3 S TENSOR REMARK 3 S11: -0.0476 S12: 0.0968 S13: 0.1363 REMARK 3 S21: -0.2994 S22: -0.2422 S23: 0.2991 REMARK 3 S31: -0.2531 S32: -0.3803 S33: 0.2898 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2735 A 2761 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9734 -18.3296 -16.7489 REMARK 3 T TENSOR REMARK 3 T11: 0.0396 T22: 0.0333 REMARK 3 T33: 0.0293 T12: 0.0446 REMARK 3 T13: -0.0016 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.4211 L22: 4.2805 REMARK 3 L33: 3.8885 L12: 2.6412 REMARK 3 L13: 1.1891 L23: 3.1525 REMARK 3 S TENSOR REMARK 3 S11: 0.0641 S12: 0.0386 S13: -0.1237 REMARK 3 S21: -0.1872 S22: -0.0247 S23: -0.1373 REMARK 3 S31: 0.0335 S32: 0.3260 S33: -0.0394 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2762 A 2785 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3543 -16.7282 -19.1653 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0472 REMARK 3 T33: 0.0193 T12: 0.0074 REMARK 3 T13: 0.0096 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.8087 L22: 2.5829 REMARK 3 L33: 2.2294 L12: 0.6702 REMARK 3 L13: 0.5072 L23: 0.6602 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.0573 S13: 0.0040 REMARK 3 S21: -0.1079 S22: -0.0105 S23: -0.0611 REMARK 3 S31: -0.0371 S32: 0.0134 S33: -0.0342 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2786 A 2792 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6850 -15.7814 -27.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.0608 T22: -0.0035 REMARK 3 T33: -0.0544 T12: 0.0236 REMARK 3 T13: 0.0037 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 7.1275 L22: 23.3429 REMARK 3 L33: 27.6571 L12: 4.6404 REMARK 3 L13: 2.4730 L23: 2.7375 REMARK 3 S TENSOR REMARK 3 S11: 0.1901 S12: 0.3897 S13: -0.2613 REMARK 3 S21: -0.2989 S22: -0.2892 S23: -0.3451 REMARK 3 S31: -0.4433 S32: 0.2456 S33: 0.0991 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2786 B 2708 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1946 1.7343 -6.1023 REMARK 3 T TENSOR REMARK 3 T11: -0.0117 T22: 0.0641 REMARK 3 T33: 0.0663 T12: 0.0016 REMARK 3 T13: 0.0380 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.8138 L22: 3.1519 REMARK 3 L33: 2.3426 L12: -2.2064 REMARK 3 L13: 2.0341 L23: -1.2913 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.0276 S13: 0.1739 REMARK 3 S21: -0.1414 S22: -0.0626 S23: -0.2504 REMARK 3 S31: 0.0360 S32: 0.2236 S33: 0.0356 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2709 B 2721 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0901 6.6164 1.5918 REMARK 3 T TENSOR REMARK 3 T11: -0.0033 T22: 0.0260 REMARK 3 T33: 0.0969 T12: -0.0427 REMARK 3 T13: -0.0150 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.8692 L22: 4.2533 REMARK 3 L33: 16.2484 L12: -0.3715 REMARK 3 L13: -0.1190 L23: -4.5398 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: -0.0543 S13: 0.2648 REMARK 3 S21: 0.2461 S22: 0.0593 S23: -0.4918 REMARK 3 S31: -0.4523 S32: 0.3694 S33: -0.0798 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2722 B 2732 REMARK 3 ORIGIN FOR THE GROUP (A): 3.2339 -2.9554 11.0107 REMARK 3 T TENSOR REMARK 3 T11: 0.0339 T22: 0.0185 REMARK 3 T33: 0.0004 T12: 0.0269 REMARK 3 T13: -0.0257 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 8.8535 L22: 15.6334 REMARK 3 L33: 5.6969 L12: 8.0933 REMARK 3 L13: 3.9849 L23: 4.7491 REMARK 3 S TENSOR REMARK 3 S11: 0.3338 S12: -0.0581 S13: -0.2840 REMARK 3 S21: 1.0942 S22: 0.1365 S23: -0.6232 REMARK 3 S31: 0.0817 S32: 0.3755 S33: -0.4703 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2733 B 2763 REMARK 3 ORIGIN FOR THE GROUP (A): -0.5140 -1.0818 -2.1617 REMARK 3 T TENSOR REMARK 3 T11: 0.0133 T22: 0.0643 REMARK 3 T33: 0.0886 T12: -0.0381 REMARK 3 T13: -0.0117 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.6047 L22: 5.2659 REMARK 3 L33: 4.1234 L12: -0.5505 REMARK 3 L13: -0.3174 L23: -1.2709 REMARK 3 S TENSOR REMARK 3 S11: 0.0472 S12: -0.0266 S13: -0.1137 REMARK 3 S21: 0.0443 S22: -0.0486 S23: 0.1856 REMARK 3 S31: 0.0175 S32: -0.1030 S33: 0.0015 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2764 B 2792 REMARK 3 ORIGIN FOR THE GROUP (A): -0.8384 2.5715 0.7313 REMARK 3 T TENSOR REMARK 3 T11: 0.0048 T22: 0.0681 REMARK 3 T33: 0.0649 T12: 0.0007 REMARK 3 T13: -0.0057 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.2839 L22: 4.4357 REMARK 3 L33: 1.4709 L12: -0.1856 REMARK 3 L13: -0.2293 L23: 0.3604 REMARK 3 S TENSOR REMARK 3 S11: 0.0097 S12: -0.0801 S13: 0.0521 REMARK 3 S21: 0.1164 S22: 0.0019 S23: -0.0577 REMARK 3 S31: -0.0789 S32: 0.0536 S33: -0.0117 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062782. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9779 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11665 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1C4Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 0.2M NACL, 25% PEG3350, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: A REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2682 REMARK 465 PRO A 2683 REMARK 465 LEU A 2684 REMARK 465 GLY A 2685 REMARK 465 SER A 2686 REMARK 465 VAL A 2687 REMARK 465 GLN A 2688 REMARK 465 MET A 2689 REMARK 465 LEU A 2690 REMARK 465 ILE A 2691 REMARK 465 SER A 2692 REMARK 465 SER A 2738 REMARK 465 LEU A 2739 REMARK 465 PRO A 2740 REMARK 465 ALA A 2741 REMARK 465 SER A 2742 REMARK 465 GLU A 2743 REMARK 465 GLU A 2744 REMARK 465 GLY A 2745 REMARK 465 PHE A 2746 REMARK 465 GLN A 2747 REMARK 465 PRO A 2748 REMARK 465 MET A 2749 REMARK 465 THR A 2793 REMARK 465 LYS A 2794 REMARK 465 ASN A 2795 REMARK 465 PHE A 2796 REMARK 465 GLY A 2797 REMARK 465 PHE A 2798 REMARK 465 VAL A 2799 REMARK 465 GLY B 2682 REMARK 465 PRO B 2683 REMARK 465 LEU B 2684 REMARK 465 GLY B 2685 REMARK 465 SER B 2738 REMARK 465 LEU B 2739 REMARK 465 PRO B 2740 REMARK 465 ALA B 2741 REMARK 465 SER B 2742 REMARK 465 GLU B 2743 REMARK 465 GLU B 2744 REMARK 465 GLY B 2745 REMARK 465 PHE B 2746 REMARK 465 GLN B 2747 REMARK 465 THR B 2793 REMARK 465 LYS B 2794 REMARK 465 ASN B 2795 REMARK 465 PHE B 2796 REMARK 465 GLY B 2797 REMARK 465 PHE B 2798 REMARK 465 VAL B 2799 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A2693 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A2792 CG CD CE NZ REMARK 470 MET B2689 CG SD CE REMARK 470 PHE B2693 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PRO B2748 CG CD REMARK 470 LYS B2792 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A2758 95.01 -160.42 REMARK 500 ASP B2758 101.88 -163.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 3PT3 A 2687 2799 UNP O95071 UBR5_HUMAN 2687 2799 DBREF 3PT3 B 2687 2799 UNP O95071 UBR5_HUMAN 2687 2799 SEQADV 3PT3 GLY A 2682 UNP O95071 EXPRESSION TAG SEQADV 3PT3 PRO A 2683 UNP O95071 EXPRESSION TAG SEQADV 3PT3 LEU A 2684 UNP O95071 EXPRESSION TAG SEQADV 3PT3 GLY A 2685 UNP O95071 EXPRESSION TAG SEQADV 3PT3 SER A 2686 UNP O95071 EXPRESSION TAG SEQADV 3PT3 GLY B 2682 UNP O95071 EXPRESSION TAG SEQADV 3PT3 PRO B 2683 UNP O95071 EXPRESSION TAG SEQADV 3PT3 LEU B 2684 UNP O95071 EXPRESSION TAG SEQADV 3PT3 GLY B 2685 UNP O95071 EXPRESSION TAG SEQADV 3PT3 SER B 2686 UNP O95071 EXPRESSION TAG SEQRES 1 A 118 GLY PRO LEU GLY SER VAL GLN MET LEU ILE SER PHE THR SEQRES 2 A 118 SER PHE ASN ASP GLU SER GLY GLU ASN ALA GLU LYS LEU SEQRES 3 A 118 LEU GLN PHE LYS ARG TRP PHE TRP SER ILE VAL GLU LYS SEQRES 4 A 118 MET SER MET THR GLU ARG GLN ASP LEU VAL TYR PHE TRP SEQRES 5 A 118 THR SER SER PRO SER LEU PRO ALA SER GLU GLU GLY PHE SEQRES 6 A 118 GLN PRO MET PRO SER ILE THR ILE ARG PRO PRO ASP ASP SEQRES 7 A 118 GLN HIS LEU PRO THR ALA ASN THR CYS ILE SER ARG LEU SEQRES 8 A 118 TYR VAL PRO LEU TYR SER SER LYS GLN ILE LEU LYS GLN SEQRES 9 A 118 LYS LEU LEU LEU ALA ILE LYS THR LYS ASN PHE GLY PHE SEQRES 10 A 118 VAL SEQRES 1 B 118 GLY PRO LEU GLY SER VAL GLN MET LEU ILE SER PHE THR SEQRES 2 B 118 SER PHE ASN ASP GLU SER GLY GLU ASN ALA GLU LYS LEU SEQRES 3 B 118 LEU GLN PHE LYS ARG TRP PHE TRP SER ILE VAL GLU LYS SEQRES 4 B 118 MET SER MET THR GLU ARG GLN ASP LEU VAL TYR PHE TRP SEQRES 5 B 118 THR SER SER PRO SER LEU PRO ALA SER GLU GLU GLY PHE SEQRES 6 B 118 GLN PRO MET PRO SER ILE THR ILE ARG PRO PRO ASP ASP SEQRES 7 B 118 GLN HIS LEU PRO THR ALA ASN THR CYS ILE SER ARG LEU SEQRES 8 B 118 TYR VAL PRO LEU TYR SER SER LYS GLN ILE LEU LYS GLN SEQRES 9 B 118 LYS LEU LEU LEU ALA ILE LYS THR LYS ASN PHE GLY PHE SEQRES 10 B 118 VAL FORMUL 3 HOH *77(H2 O) HELIX 1 1 ASN A 2703 MET A 2721 1 19 HELIX 2 2 SER A 2722 SER A 2735 1 14 HELIX 3 3 SER A 2779 LYS A 2792 1 14 HELIX 4 4 SER B 2686 THR B 2694 1 9 HELIX 5 5 ASN B 2703 MET B 2721 1 19 HELIX 6 6 SER B 2722 SER B 2735 1 14 HELIX 7 7 THR B 2767 ILE B 2769 5 3 HELIX 8 8 SER B 2779 LYS B 2792 1 14 SHEET 1 A 4 SER A2695 ASP A2698 0 SHEET 2 A 4 SER A2751 ARG A2755 1 O ILE A2752 N ASN A2697 SHEET 3 A 4 ARG A2771 PRO A2775 1 O LEU A2772 N THR A2753 SHEET 4 A 4 THR A2764 ASN A2766 -1 N THR A2764 O TYR A2773 SHEET 1 B 4 SER B2695 ASP B2698 0 SHEET 2 B 4 SER B2751 ARG B2755 1 O ILE B2752 N ASN B2697 SHEET 3 B 4 ARG B2771 PRO B2775 1 O LEU B2772 N THR B2753 SHEET 4 B 4 THR B2764 ASN B2766 -1 N THR B2764 O TYR B2773 CRYST1 29.240 39.070 44.170 90.04 84.59 81.77 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034200 -0.004947 -0.003310 0.00000 SCALE2 0.000000 0.025861 0.000373 0.00000 SCALE3 0.000000 0.000000 0.022743 0.00000