HEADER UNKNOWN FUNCTION 03-DEC-10 3PUB TITLE CRYSTAL STRUCTURE OF THE BOMBYX MORI LOW MOLECULAR WEIGHT LIPOPROTEIN TITLE 2 7 (BMLP7) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30KDA PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LOW MOLECULAR WEIGHT LIPOPROTEIN 7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: SILK MOTH, SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA-TREFOIL FOLD, HAEMOLYMPH, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.-P.YANG,X.-X.MA,Y.-X.HE,W.-F.LI,Y.KANG,R.BAO,Y.CHEN,C.-Z.ZHOU REVDAT 3 20-MAR-24 3PUB 1 SEQADV REVDAT 2 05-MAR-14 3PUB 1 JRNL VERSN REVDAT 1 01-JUN-11 3PUB 0 JRNL AUTH J.-P.YANG,X.-X.MA,Y.-X.HE,W.-F.LI,Y.KANG,R.BAO,Y.CHEN, JRNL AUTH 2 C.-Z.ZHOU JRNL TITL CRYSTAL STRUCTURE OF THE 30 K PROTEIN FROM THE SILKWORM JRNL TITL 2 BOMBYX MORI REVEALS A NEW MEMBER OF THE BETA-TREFOIL JRNL TITL 3 SUPERFAMILY JRNL REF J.STRUCT.BIOL. V. 175 97 2011 JRNL REFN ISSN 1047-8477 JRNL PMID 21514389 JRNL DOI 10.1016/J.JSB.2011.04.003 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 30258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1602 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2205 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.2310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -0.54000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : -0.49000 REMARK 3 B13 (A**2) : 1.26000 REMARK 3 B23 (A**2) : -0.58000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.197 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.315 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3931 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5317 ; 1.186 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 469 ; 6.307 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;32.989 ;24.356 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 680 ;13.914 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.152 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 557 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3022 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2335 ; 0.651 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3751 ; 1.220 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1596 ; 2.038 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1566 ; 3.217 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): -12.3850 8.1230 21.6390 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 0.0966 REMARK 3 T33: 0.1073 T12: 0.0001 REMARK 3 T13: -0.0009 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.8231 L22: 1.8182 REMARK 3 L33: 1.5970 L12: 0.2367 REMARK 3 L13: -0.3052 L23: -0.3800 REMARK 3 S TENSOR REMARK 3 S11: 0.0167 S12: -0.0963 S13: 0.0559 REMARK 3 S21: 0.1912 S22: -0.0117 S23: 0.1534 REMARK 3 S31: -0.0436 S32: 0.0091 S33: -0.0050 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): -0.0960 -0.1200 0.5370 REMARK 3 T TENSOR REMARK 3 T11: 0.0801 T22: 0.1293 REMARK 3 T33: 0.0922 T12: 0.0017 REMARK 3 T13: -0.0286 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.9326 L22: 0.8848 REMARK 3 L33: 1.2165 L12: -0.1746 REMARK 3 L13: -0.4553 L23: 0.4107 REMARK 3 S TENSOR REMARK 3 S11: -0.0111 S12: 0.1323 S13: -0.0391 REMARK 3 S21: 0.0037 S22: -0.0398 S23: 0.0153 REMARK 3 S31: 0.0310 S32: -0.0252 S33: 0.0509 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 50 B 126 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6890 -18.2660 -45.8730 REMARK 3 T TENSOR REMARK 3 T11: 0.0890 T22: 0.0798 REMARK 3 T33: 0.1244 T12: 0.0033 REMARK 3 T13: -0.0008 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.2994 L22: 1.8664 REMARK 3 L33: 2.3400 L12: -0.3946 REMARK 3 L13: -0.2310 L23: 0.4749 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: 0.0196 S13: -0.0525 REMARK 3 S21: -0.1431 S22: -0.0221 S23: -0.1164 REMARK 3 S31: -0.0145 S32: 0.0065 S33: -0.0034 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 127 B 285 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4940 -10.6920 -24.9710 REMARK 3 T TENSOR REMARK 3 T11: 0.0845 T22: 0.1164 REMARK 3 T33: 0.0900 T12: 0.0053 REMARK 3 T13: -0.0283 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.9530 L22: 0.5828 REMARK 3 L33: 2.2342 L12: -0.2103 REMARK 3 L13: -0.9505 L23: 0.3836 REMARK 3 S TENSOR REMARK 3 S11: -0.0478 S12: 0.0381 S13: -0.0213 REMARK 3 S21: 0.0980 S22: 0.0244 S23: -0.0266 REMARK 3 S31: 0.0911 S32: -0.1668 S33: 0.0234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31866 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M 4-(2-HYDROXYETHYL)-1 REMARK 280 -PIPERAZINEETHANESULFONIC ACID (PH 7.5), 0.2M KCL, 28% REMARK 280 PENTAERYTHRITOL PROPOXYLATE (17/8, PO/OH), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 45 REMARK 465 GLY A 46 REMARK 465 ASP A 47 REMARK 465 SER A 48 REMARK 465 ASP A 49 REMARK 465 ALA A 285 REMARK 465 ALA A 286 REMARK 465 ALA A 287 REMARK 465 LEU A 288 REMARK 465 GLU A 289 REMARK 465 HIS A 290 REMARK 465 HIS A 291 REMARK 465 HIS A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 MET B 45 REMARK 465 GLY B 46 REMARK 465 ASP B 47 REMARK 465 SER B 48 REMARK 465 ASP B 49 REMARK 465 ALA B 286 REMARK 465 ALA B 287 REMARK 465 LEU B 288 REMARK 465 GLU B 289 REMARK 465 HIS B 290 REMARK 465 HIS B 291 REMARK 465 HIS B 292 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 465 HIS B 295 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 165 -32.44 -135.66 REMARK 500 THR A 168 -19.69 -143.60 REMARK 500 ASP A 233 -113.91 47.94 REMARK 500 THR B 168 -14.49 -140.08 REMARK 500 ASP B 233 -117.45 52.96 REMARK 500 REMARK 500 REMARK: NULL DBREF 3PUB A 47 284 UNP E5EVW2 E5EVW2_BOMMO 19 256 DBREF 3PUB B 47 284 UNP E5EVW2 E5EVW2_BOMMO 19 256 SEQADV 3PUB MET A 45 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB GLY A 46 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA A 285 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA A 286 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA A 287 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB LEU A 288 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB GLU A 289 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 290 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 291 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 292 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 293 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 294 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS A 295 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB MET B 45 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB GLY B 46 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA B 285 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA B 286 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB ALA B 287 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB LEU B 288 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB GLU B 289 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 290 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 291 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 292 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 293 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 294 UNP E5EVW2 EXPRESSION TAG SEQADV 3PUB HIS B 295 UNP E5EVW2 EXPRESSION TAG SEQRES 1 A 251 MET GLY ASP SER ASP VAL PRO ASN ASP ILE LEU GLU GLU SEQRES 2 A 251 GLN LEU TYR ASN SER ILE VAL VAL ALA ASP TYR ASP SER SEQRES 3 A 251 ALA VAL GLU LYS SER LYS HIS LEU TYR GLU GLU LYS LYS SEQRES 4 A 251 SER GLU VAL ILE THR ASN VAL VAL ASN LYS LEU ILE ARG SEQRES 5 A 251 ASN ASN LYS MET ASN CYS MET GLU TYR ALA TYR GLN LEU SEQRES 6 A 251 TRP LEU GLN GLY SER LYS ASP ILE VAL ARG ASP CYS PHE SEQRES 7 A 251 PRO VAL GLU PHE ARG LEU ILE PHE ALA GLU ASN ALA ILE SEQRES 8 A 251 LYS LEU MET TYR LYS ARG ASP GLY LEU ALA LEU THR LEU SEQRES 9 A 251 SER ASN ASP VAL HIS GLY ASN ASP GLY ARG LEU ALA PHE SEQRES 10 A 251 GLY ASP GLY LYS ASP LYS THR SER PRO LYS VAL SER TRP SEQRES 11 A 251 LYS PHE ILE ALA LEU TRP GLU ASN ASN LYS VAL TYR PHE SEQRES 12 A 251 LYS ILE LEU ASN THR GLU ARG ASN GLN TYR LEU VAL LEU SEQRES 13 A 251 GLY VAL GLY THR ASN PRO ASN GLY ASP HIS MET ALA PHE SEQRES 14 A 251 GLY VAL ASN SER VAL ASP SER PHE ARG ALA GLN TRP TYR SEQRES 15 A 251 LEU GLN PRO ALA LYS TYR ASP LYS ASP ASN LEU PHE TYR SEQRES 16 A 251 ILE TYR ASN ARG GLU TYR SER LYS ALA LEU THR LEU SER SEQRES 17 A 251 ARG THR LEU GLU THR SER GLY ASN ARG MET ALA TRP GLY SEQRES 18 A 251 TYR ASN GLY ARG VAL ILE GLY SER PRO GLU HIS TYR ALA SEQRES 19 A 251 TRP GLY VAL LYS ALA PHE ALA ALA ALA LEU GLU HIS HIS SEQRES 20 A 251 HIS HIS HIS HIS SEQRES 1 B 251 MET GLY ASP SER ASP VAL PRO ASN ASP ILE LEU GLU GLU SEQRES 2 B 251 GLN LEU TYR ASN SER ILE VAL VAL ALA ASP TYR ASP SER SEQRES 3 B 251 ALA VAL GLU LYS SER LYS HIS LEU TYR GLU GLU LYS LYS SEQRES 4 B 251 SER GLU VAL ILE THR ASN VAL VAL ASN LYS LEU ILE ARG SEQRES 5 B 251 ASN ASN LYS MET ASN CYS MET GLU TYR ALA TYR GLN LEU SEQRES 6 B 251 TRP LEU GLN GLY SER LYS ASP ILE VAL ARG ASP CYS PHE SEQRES 7 B 251 PRO VAL GLU PHE ARG LEU ILE PHE ALA GLU ASN ALA ILE SEQRES 8 B 251 LYS LEU MET TYR LYS ARG ASP GLY LEU ALA LEU THR LEU SEQRES 9 B 251 SER ASN ASP VAL HIS GLY ASN ASP GLY ARG LEU ALA PHE SEQRES 10 B 251 GLY ASP GLY LYS ASP LYS THR SER PRO LYS VAL SER TRP SEQRES 11 B 251 LYS PHE ILE ALA LEU TRP GLU ASN ASN LYS VAL TYR PHE SEQRES 12 B 251 LYS ILE LEU ASN THR GLU ARG ASN GLN TYR LEU VAL LEU SEQRES 13 B 251 GLY VAL GLY THR ASN PRO ASN GLY ASP HIS MET ALA PHE SEQRES 14 B 251 GLY VAL ASN SER VAL ASP SER PHE ARG ALA GLN TRP TYR SEQRES 15 B 251 LEU GLN PRO ALA LYS TYR ASP LYS ASP ASN LEU PHE TYR SEQRES 16 B 251 ILE TYR ASN ARG GLU TYR SER LYS ALA LEU THR LEU SER SEQRES 17 B 251 ARG THR LEU GLU THR SER GLY ASN ARG MET ALA TRP GLY SEQRES 18 B 251 TYR ASN GLY ARG VAL ILE GLY SER PRO GLU HIS TYR ALA SEQRES 19 B 251 TRP GLY VAL LYS ALA PHE ALA ALA ALA LEU GLU HIS HIS SEQRES 20 B 251 HIS HIS HIS HIS FORMUL 3 HOH *93(H2 O) HELIX 1 1 PRO A 51 VAL A 65 1 15 HELIX 2 2 ASP A 67 GLU A 81 1 15 HELIX 3 3 LYS A 83 ASN A 97 1 15 HELIX 4 4 MET A 100 GLN A 112 1 13 HELIX 5 5 SER A 114 PHE A 122 1 9 HELIX 6 6 PRO A 123 ALA A 131 1 9 HELIX 7 7 SER A 169 VAL A 172 5 4 HELIX 8 8 SER A 220 ALA A 223 5 4 HELIX 9 9 SER A 273 ALA A 278 1 6 HELIX 10 10 PRO B 51 VAL B 65 1 15 HELIX 11 11 ASP B 67 GLU B 81 1 15 HELIX 12 12 LYS B 83 ASN B 97 1 15 HELIX 13 13 MET B 100 GLN B 112 1 13 HELIX 14 14 SER B 114 PHE B 122 1 9 HELIX 15 15 PRO B 123 ALA B 131 1 9 HELIX 16 16 HIS B 153 GLY B 157 5 5 HELIX 17 17 SER B 169 VAL B 172 5 4 HELIX 18 18 SER B 220 ALA B 223 5 4 HELIX 19 19 SER B 273 ALA B 278 1 6 SHEET 1 A 5 ALA A 248 LEU A 251 0 SHEET 2 A 5 ARG A 261 TYR A 266 -1 O TYR A 266 N ALA A 248 SHEET 3 A 5 ARG A 158 GLY A 162 -1 N GLY A 162 O ARG A 261 SHEET 4 A 5 LEU A 144 LEU A 148 -1 N THR A 147 O PHE A 161 SHEET 5 A 5 TRP A 279 ALA A 283 0 SHEET 1 B 8 TRP A 279 ALA A 283 0 SHEET 2 B 8 ILE A 135 TYR A 139 -1 N MET A 138 O GLY A 280 SHEET 3 B 8 TRP A 174 GLU A 181 -1 O TRP A 174 N ILE A 135 SHEET 4 B 8 LYS A 184 ASN A 191 -1 O LYS A 188 N ILE A 177 SHEET 5 B 8 GLN A 196 THR A 204 -1 O GLN A 196 N ASN A 191 SHEET 6 B 8 HIS A 210 VAL A 215 -1 O VAL A 215 N TYR A 197 SHEET 7 B 8 ARG A 261 TYR A 266 -1 O GLY A 265 N HIS A 210 SHEET 8 B 8 ALA A 248 LEU A 251 -1 N ALA A 248 O TYR A 266 SHEET 1 C 6 ILE A 135 TYR A 139 0 SHEET 2 C 6 TRP A 174 GLU A 181 -1 O TRP A 174 N ILE A 135 SHEET 3 C 6 LYS A 184 ASN A 191 -1 O LYS A 188 N ILE A 177 SHEET 4 C 6 HIS A 210 VAL A 215 0 SHEET 5 C 6 ARG A 158 GLY A 162 -1 N ARG A 158 O GLY A 214 SHEET 6 C 6 LEU A 144 LEU A 148 -1 N THR A 147 O PHE A 161 SHEET 1 D 3 ARG A 158 GLY A 162 0 SHEET 2 D 3 HIS A 210 VAL A 215 -1 O GLY A 214 N ARG A 158 SHEET 3 D 3 ARG A 261 TYR A 266 -1 O GLY A 265 N HIS A 210 SHEET 1 E 2 TRP A 225 TYR A 232 0 SHEET 2 E 2 ASP A 235 ASN A 242 -1 O TYR A 241 N TYR A 226 SHEET 1 F 5 ALA B 248 LEU B 255 0 SHEET 2 F 5 ARG B 261 TYR B 266 -1 O TYR B 266 N ALA B 248 SHEET 3 F 5 ARG B 158 ASP B 163 -1 N GLY B 162 O ARG B 261 SHEET 4 F 5 LEU B 144 LEU B 148 -1 N ALA B 145 O ASP B 163 SHEET 5 F 5 TRP B 279 ALA B 283 0 SHEET 1 G 8 TRP B 279 ALA B 283 0 SHEET 2 G 8 ILE B 135 TYR B 139 -1 N MET B 138 O GLY B 280 SHEET 3 G 8 TRP B 174 GLU B 181 -1 O TRP B 174 N ILE B 135 SHEET 4 G 8 LYS B 184 ASN B 191 -1 O TYR B 186 N LEU B 179 SHEET 5 G 8 GLN B 196 THR B 204 -1 O GLN B 196 N ASN B 191 SHEET 6 G 8 HIS B 210 VAL B 215 -1 O VAL B 215 N TYR B 197 SHEET 7 G 8 ARG B 261 TYR B 266 -1 O GLY B 265 N HIS B 210 SHEET 8 G 8 ALA B 248 LEU B 255 -1 N ALA B 248 O TYR B 266 SHEET 1 H 6 ILE B 135 TYR B 139 0 SHEET 2 H 6 TRP B 174 GLU B 181 -1 O TRP B 174 N ILE B 135 SHEET 3 H 6 LYS B 184 ASN B 191 -1 O TYR B 186 N LEU B 179 SHEET 4 H 6 HIS B 210 VAL B 215 0 SHEET 5 H 6 ARG B 158 ASP B 163 -1 N ARG B 158 O GLY B 214 SHEET 6 H 6 LEU B 144 LEU B 148 -1 N ALA B 145 O ASP B 163 SHEET 1 I 3 ARG B 158 ASP B 163 0 SHEET 2 I 3 HIS B 210 VAL B 215 -1 O GLY B 214 N ARG B 158 SHEET 3 I 3 ARG B 261 TYR B 266 -1 O GLY B 265 N HIS B 210 SHEET 1 J 2 TRP B 225 TYR B 232 0 SHEET 2 J 2 ASP B 235 ASN B 242 -1 O TYR B 241 N TYR B 226 CRYST1 41.855 49.322 54.790 93.26 94.04 103.47 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023892 0.005723 0.002126 0.00000 SCALE2 0.000000 0.020848 0.001579 0.00000 SCALE3 0.000000 0.000000 0.018349 0.00000