HEADER LYASE 06-DEC-10 3PUO TITLE CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE SYNTHASE FROM PSEUDOMONAS TITLE 2 AERUGINOSA(PSDHDPS)COMPLEXED WITH L-LYSINE AT 2.65A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDRODIPICOLINATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DHDPS; COMPND 5 EC: 4.2.1.52; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: DAPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28C(+) KEYWDS LYASE, LYSINE, BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR N.KAUR,M.KUMAR,S.KUMAR,A.GAUTAM,M.SINHA,P.KAUR,S.SHARMA,R.SHARMA, AUTHOR 2 R.TEWARI,T.P.SINGH REVDAT 3 01-NOV-23 3PUO 1 REMARK SEQADV REVDAT 2 07-SEP-11 3PUO 1 JRNL VERSN REVDAT 1 29-DEC-10 3PUO 0 JRNL AUTH N.KAUR,A.GAUTAM,S.KUMAR,A.SINGH,N.SINGH,S.SHARMA,R.SHARMA, JRNL AUTH 2 R.TEWARI,T.P.SINGH JRNL TITL BIOCHEMICAL STUDIES AND CRYSTAL STRUCTURE DETERMINATION OF JRNL TITL 2 DIHYDRODIPICOLINATE SYNTHASE FROM PSEUDOMONAS AERUGINOSA JRNL REF INT.J.BIOL.MACROMOL. V. 48 779 2011 JRNL REFN ISSN 0141-8130 JRNL PMID 21396954 JRNL DOI 10.1016/J.IJBIOMAC.2011.03.002 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 15446 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 826 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1103 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4400 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.99000 REMARK 3 B22 (A**2) : -0.54000 REMARK 3 B33 (A**2) : 1.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.384 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.777 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4501 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6114 ; 1.450 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 582 ; 2.975 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;39.829 ;23.820 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 762 ;17.494 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;18.150 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 719 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3360 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2921 ; 1.022 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4695 ; 1.828 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1580 ; 2.130 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1419 ; 3.344 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16422 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 57.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.33500 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3NOE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 3350, 70MM TRIS-HCL, 170MM REMARK 280 MGCL2, 6% PROPYLENE GLYCOL, PH 8.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.67000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.89000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.92000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.89000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.67000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.92000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 106 CD1 TYR A 106 CE1 -0.102 REMARK 500 TYR A 106 CE2 TYR A 106 CD2 -0.126 REMARK 500 TYR A 107 CZ TYR A 107 CE2 -0.078 REMARK 500 TYR A 107 CE2 TYR A 107 CD2 -0.095 REMARK 500 TYR B 106 CD1 TYR B 106 CE1 -0.103 REMARK 500 TYR B 106 CE2 TYR B 106 CD2 -0.096 REMARK 500 TYR B 107 CE2 TYR B 107 CD2 -0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 106 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 ARG A 138 O - C - N ANGL. DEV. = 10.4 DEGREES REMARK 500 THR A 139 C - N - CA ANGL. DEV. = -15.1 DEGREES REMARK 500 ASP B 279 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 109 59.62 36.65 REMARK 500 VAL A 135 70.89 -154.54 REMARK 500 LEU A 243 -0.63 -58.27 REMARK 500 ILE A 245 -8.63 -58.40 REMARK 500 SER A 247 133.77 -38.97 REMARK 500 LEU A 291 -160.80 -119.72 REMARK 500 ASP B 52 175.28 -59.34 REMARK 500 LYS B 68 28.92 49.04 REMARK 500 SER B 94 47.40 -73.33 REMARK 500 LYS B 109 73.39 44.41 REMARK 500 VAL B 135 80.22 -155.52 REMARK 500 LYS B 179 1.62 -64.01 REMARK 500 ALA B 207 -17.89 -49.76 REMARK 500 LEU B 243 -0.95 -58.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYS A 293 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 294 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYS A 295 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYS B 293 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NOE RELATED DB: PDB DBREF 3PUO A 1 292 UNP D1MH64 D1MH64_PSEAE 1 292 DBREF 3PUO B 1 292 UNP D1MH64 D1MH64_PSEAE 1 292 SEQADV 3PUO ASP A 34 UNP D1MH64 GLU 34 ENGINEERED MUTATION SEQADV 3PUO VAL A 60 UNP D1MH64 ILE 60 ENGINEERED MUTATION SEQADV 3PUO ASP A 234 UNP D1MH64 GLU 234 ENGINEERED MUTATION SEQADV 3PUO ASP A 279 UNP D1MH64 GLU 279 ENGINEERED MUTATION SEQADV 3PUO ASP B 34 UNP D1MH64 GLU 34 ENGINEERED MUTATION SEQADV 3PUO VAL B 60 UNP D1MH64 ILE 60 ENGINEERED MUTATION SEQADV 3PUO ASP B 234 UNP D1MH64 GLU 234 ENGINEERED MUTATION SEQADV 3PUO ASP B 279 UNP D1MH64 GLU 279 ENGINEERED MUTATION SEQRES 1 A 292 MET ILE ALA GLY SER MET VAL ALA LEU VAL THR PRO PHE SEQRES 2 A 292 ASP ALA GLN GLY ARG LEU ASP TRP ASP SER LEU ALA LYS SEQRES 3 A 292 LEU VAL ASP PHE HIS LEU GLN ASP GLY THR ASN ALA ILE SEQRES 4 A 292 VAL ALA VAL GLY THR THR GLY GLU SER ALA THR LEU ASP SEQRES 5 A 292 VAL GLU GLU HIS ILE GLN VAL VAL ARG ARG VAL VAL ASP SEQRES 6 A 292 GLN VAL LYS GLY ARG ILE PRO VAL ILE ALA GLY THR GLY SEQRES 7 A 292 ALA ASN SER THR ARG GLU ALA VAL ALA LEU THR GLU ALA SEQRES 8 A 292 ALA LYS SER GLY GLY ALA ASP ALA CYS LEU LEU VAL THR SEQRES 9 A 292 PRO TYR TYR ASN LYS PRO THR GLN GLU GLY MET TYR GLN SEQRES 10 A 292 HIS PHE ARG HIS ILE ALA GLU ALA VAL ALA ILE PRO GLN SEQRES 11 A 292 ILE LEU TYR ASN VAL PRO GLY ARG THR SER CYS ASP MET SEQRES 12 A 292 LEU PRO GLU THR VAL GLU ARG LEU SER LYS VAL PRO ASN SEQRES 13 A 292 ILE ILE GLY ILE LYS GLU ALA THR GLY ASP LEU GLN ARG SEQRES 14 A 292 ALA LYS GLU VAL ILE GLU ARG VAL GLY LYS ASP PHE LEU SEQRES 15 A 292 VAL TYR SER GLY ASP ASP ALA THR ALA VAL GLU LEU MET SEQRES 16 A 292 LEU LEU GLY GLY LYS GLY ASN ILE SER VAL THR ALA ASN SEQRES 17 A 292 VAL ALA PRO ARG ALA MET SER ASP LEU CYS ALA ALA ALA SEQRES 18 A 292 MET ARG GLY ASP ALA ALA ALA ALA ARG ALA ILE ASN ASP SEQRES 19 A 292 ARG LEU MET PRO LEU HIS LYS ALA LEU PHE ILE GLU SER SEQRES 20 A 292 ASN PRO ILE PRO VAL LYS TRP ALA LEU HIS GLU MET GLY SEQRES 21 A 292 LEU ILE PRO GLU GLY ILE ARG LEU PRO LEU THR TRP LEU SEQRES 22 A 292 SER PRO HIS CYS HIS ASP PRO LEU ARG GLN ALA MET ARG SEQRES 23 A 292 GLN THR GLY VAL LEU ALA SEQRES 1 B 292 MET ILE ALA GLY SER MET VAL ALA LEU VAL THR PRO PHE SEQRES 2 B 292 ASP ALA GLN GLY ARG LEU ASP TRP ASP SER LEU ALA LYS SEQRES 3 B 292 LEU VAL ASP PHE HIS LEU GLN ASP GLY THR ASN ALA ILE SEQRES 4 B 292 VAL ALA VAL GLY THR THR GLY GLU SER ALA THR LEU ASP SEQRES 5 B 292 VAL GLU GLU HIS ILE GLN VAL VAL ARG ARG VAL VAL ASP SEQRES 6 B 292 GLN VAL LYS GLY ARG ILE PRO VAL ILE ALA GLY THR GLY SEQRES 7 B 292 ALA ASN SER THR ARG GLU ALA VAL ALA LEU THR GLU ALA SEQRES 8 B 292 ALA LYS SER GLY GLY ALA ASP ALA CYS LEU LEU VAL THR SEQRES 9 B 292 PRO TYR TYR ASN LYS PRO THR GLN GLU GLY MET TYR GLN SEQRES 10 B 292 HIS PHE ARG HIS ILE ALA GLU ALA VAL ALA ILE PRO GLN SEQRES 11 B 292 ILE LEU TYR ASN VAL PRO GLY ARG THR SER CYS ASP MET SEQRES 12 B 292 LEU PRO GLU THR VAL GLU ARG LEU SER LYS VAL PRO ASN SEQRES 13 B 292 ILE ILE GLY ILE LYS GLU ALA THR GLY ASP LEU GLN ARG SEQRES 14 B 292 ALA LYS GLU VAL ILE GLU ARG VAL GLY LYS ASP PHE LEU SEQRES 15 B 292 VAL TYR SER GLY ASP ASP ALA THR ALA VAL GLU LEU MET SEQRES 16 B 292 LEU LEU GLY GLY LYS GLY ASN ILE SER VAL THR ALA ASN SEQRES 17 B 292 VAL ALA PRO ARG ALA MET SER ASP LEU CYS ALA ALA ALA SEQRES 18 B 292 MET ARG GLY ASP ALA ALA ALA ALA ARG ALA ILE ASN ASP SEQRES 19 B 292 ARG LEU MET PRO LEU HIS LYS ALA LEU PHE ILE GLU SER SEQRES 20 B 292 ASN PRO ILE PRO VAL LYS TRP ALA LEU HIS GLU MET GLY SEQRES 21 B 292 LEU ILE PRO GLU GLY ILE ARG LEU PRO LEU THR TRP LEU SEQRES 22 B 292 SER PRO HIS CYS HIS ASP PRO LEU ARG GLN ALA MET ARG SEQRES 23 B 292 GLN THR GLY VAL LEU ALA HET LYS A 293 10 HET GOL A 294 6 HET LYS A 295 10 HET LYS B 293 10 HETNAM LYS LYSINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 LYS 3(C6 H15 N2 O2 1+) FORMUL 4 GOL C3 H8 O3 FORMUL 7 HOH *326(H2 O) HELIX 1 1 ASP A 20 ASP A 34 1 15 HELIX 2 2 GLU A 47 LEU A 51 5 5 HELIX 3 3 ASP A 52 LYS A 68 1 17 HELIX 4 4 SER A 81 SER A 94 1 14 HELIX 5 5 THR A 111 VAL A 126 1 16 HELIX 6 6 VAL A 135 SER A 140 1 6 HELIX 7 7 LEU A 144 LYS A 153 1 10 HELIX 8 8 ASP A 166 GLU A 175 1 10 HELIX 9 9 ASP A 187 ALA A 189 5 3 HELIX 10 10 THR A 190 LEU A 197 1 8 HELIX 11 11 VAL A 205 VAL A 209 5 5 HELIX 12 12 ALA A 210 GLY A 224 1 15 HELIX 13 13 ASP A 225 LEU A 243 1 19 HELIX 14 14 PRO A 249 MET A 259 1 11 HELIX 15 15 SER A 274 HIS A 276 5 3 HELIX 16 16 CYS A 277 THR A 288 1 12 HELIX 17 17 ASP B 20 ASP B 34 1 15 HELIX 18 18 GLU B 47 LEU B 51 5 5 HELIX 19 19 ASP B 52 LYS B 68 1 17 HELIX 20 20 SER B 81 SER B 94 1 14 HELIX 21 21 THR B 111 VAL B 126 1 16 HELIX 22 22 VAL B 135 SER B 140 1 6 HELIX 23 23 LEU B 144 LYS B 153 1 10 HELIX 24 24 ASP B 166 VAL B 177 1 12 HELIX 25 25 THR B 190 LEU B 197 1 8 HELIX 26 26 VAL B 205 VAL B 209 5 5 HELIX 27 27 ALA B 210 GLY B 224 1 15 HELIX 28 28 ASP B 225 LEU B 243 1 19 HELIX 29 29 PRO B 249 MET B 259 1 11 HELIX 30 30 SER B 274 HIS B 276 5 3 HELIX 31 31 CYS B 277 THR B 288 1 12 SHEET 1 A 9 GLY A 4 VAL A 7 0 SHEET 2 A 9 ALA A 38 ALA A 41 1 O VAL A 40 N VAL A 7 SHEET 3 A 9 VAL A 73 GLY A 76 1 O ILE A 74 N ILE A 39 SHEET 4 A 9 ALA A 99 VAL A 103 1 O ALA A 99 N ALA A 75 SHEET 5 A 9 GLN A 130 ASN A 134 1 O ILE A 131 N CYS A 100 SHEET 6 A 9 ILE A 157 GLU A 162 1 O LYS A 161 N LEU A 132 SHEET 7 A 9 LEU A 182 SER A 185 1 O TYR A 184 N ILE A 160 SHEET 8 A 9 GLY A 201 SER A 204 1 O ILE A 203 N SER A 185 SHEET 9 A 9 GLY A 4 VAL A 7 1 N GLY A 4 O ASN A 202 SHEET 1 B 9 GLY B 4 ALA B 8 0 SHEET 2 B 9 ALA B 38 ALA B 41 1 O VAL B 40 N VAL B 7 SHEET 3 B 9 VAL B 73 GLY B 76 1 O ILE B 74 N ILE B 39 SHEET 4 B 9 ALA B 99 VAL B 103 1 O LEU B 101 N ALA B 75 SHEET 5 B 9 GLN B 130 ASN B 134 1 O ILE B 131 N LEU B 102 SHEET 6 B 9 ILE B 157 GLU B 162 1 O GLY B 159 N LEU B 132 SHEET 7 B 9 LEU B 182 SER B 185 1 O TYR B 184 N ILE B 160 SHEET 8 B 9 GLY B 201 ASN B 202 1 O GLY B 201 N SER B 185 SHEET 9 B 9 GLY B 4 ALA B 8 1 N MET B 6 O ASN B 202 CISPEP 1 ASN A 248 PRO A 249 0 0.94 CISPEP 2 LEU A 268 PRO A 269 0 1.01 CISPEP 3 ASN B 248 PRO B 249 0 1.36 CISPEP 4 LEU B 268 PRO B 269 0 2.78 SITE 1 AC1 9 SER A 48 ALA A 49 LEU A 51 ASP A 52 SITE 2 AC1 9 VAL A 53 HIS A 56 ASN B 80 GLU B 84 SITE 3 AC1 9 LYS B 293 SITE 1 AC2 3 ARG A 212 ASP A 216 GLU B 124 SITE 1 AC3 9 MET A 1 ILE A 266 ARG A 267 LEU A 268 SITE 2 AC3 9 LEU A 270 THR A 271 TRP A 272 HOH A 298 SITE 3 AC3 9 GLN B 117 SITE 1 AC4 6 GLU A 84 LYS A 293 SER B 48 ALA B 49 SITE 2 AC4 6 LEU B 51 GLU B 84 CRYST1 81.340 81.840 81.780 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012294 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012228 0.00000