HEADER TRANSFERASE/DNA 09-DEC-10 3PX0 TITLE CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO TITLE 2 DNA AND DCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE I; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: BACILLUS FRAGMENT (ANALOGOUS TO E. COLI KLENOW FRAGMENT); COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'); COMPND 10 CHAIN: B, E; COMPND 11 FRAGMENT: DNA PRIMER STRAND; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*C*AP*TP*AP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'); COMPND 15 CHAIN: C, F; COMPND 16 FRAGMENT: DNA TEMPLATE STRAND; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS KAUSTOPHILUS; SOURCE 3 ORGANISM_TAXID: 1462; SOURCE 4 GENE: POLA, GK2730; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES KEYWDS DNA POLYMERASE I, PROTEIN-DNA COMPLEX, TRANSFERASE-DNA COMPLEX, KEYWDS 2 CYTOSINE-ADENINE, CLOSED CONFORMATION EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,L.S.BEESE REVDAT 5 13-SEP-23 3PX0 1 REMARK SEQADV LINK REVDAT 4 17-JUL-19 3PX0 1 REMARK LINK REVDAT 3 09-NOV-11 3PX0 1 JRNL REVDAT 2 02-NOV-11 3PX0 1 JRNL REVDAT 1 19-OCT-11 3PX0 0 JRNL AUTH W.WANG,H.W.HELLINGA,L.S.BEESE JRNL TITL STRUCTURAL EVIDENCE FOR THE RARE TAUTOMER HYPOTHESIS OF JRNL TITL 2 SPONTANEOUS MUTAGENESIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 17644 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 22006298 JRNL DOI 10.1073/PNAS.1114496108 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 149632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.470 REMARK 3 FREE R VALUE TEST SET COUNT : 6687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2487 - 5.3689 0.99 5391 279 0.2093 0.2130 REMARK 3 2 5.3689 - 4.2640 1.00 5221 272 0.1714 0.2140 REMARK 3 3 4.2640 - 3.7257 1.00 5168 269 0.1587 0.1679 REMARK 3 4 3.7257 - 3.3854 0.98 5056 253 0.1720 0.2086 REMARK 3 5 3.3854 - 3.1430 1.00 5120 273 0.1816 0.1795 REMARK 3 6 3.1430 - 2.9578 1.00 5119 253 0.1864 0.2216 REMARK 3 7 2.9578 - 2.8097 1.00 5118 233 0.1888 0.2239 REMARK 3 8 2.8097 - 2.6874 1.00 5122 231 0.1847 0.2266 REMARK 3 9 2.6874 - 2.5840 1.00 5121 215 0.1761 0.2006 REMARK 3 10 2.5840 - 2.4949 1.00 5095 215 0.1760 0.2151 REMARK 3 11 2.4949 - 2.4169 0.99 5094 203 0.1755 0.2060 REMARK 3 12 2.4169 - 2.3478 0.99 5071 212 0.1735 0.2171 REMARK 3 13 2.3478 - 2.2860 0.99 5070 197 0.1754 0.2339 REMARK 3 14 2.2860 - 2.2303 0.73 3779 133 0.3180 0.3897 REMARK 3 15 2.2303 - 2.1796 0.93 4708 251 0.2053 0.2348 REMARK 3 16 2.1796 - 2.1332 0.98 5049 189 0.1821 0.1963 REMARK 3 17 2.1332 - 2.0905 0.98 4997 204 0.1794 0.2073 REMARK 3 18 2.0905 - 2.0511 0.98 5007 192 0.1889 0.2313 REMARK 3 19 2.0511 - 2.0145 0.97 4969 174 0.1890 0.2118 REMARK 3 20 2.0145 - 1.9803 0.96 4918 188 0.1947 0.2314 REMARK 3 21 1.9803 - 1.9484 0.94 4718 249 0.2007 0.2264 REMARK 3 22 1.9484 - 1.9184 0.72 3643 192 0.3457 0.3907 REMARK 3 23 1.9184 - 1.8902 0.66 3327 175 0.3758 0.4117 REMARK 3 24 1.8902 - 1.8636 0.92 4645 244 0.2281 0.2678 REMARK 3 25 1.8636 - 1.8384 0.91 4543 239 0.2304 0.2717 REMARK 3 26 1.8384 - 1.8145 0.91 4598 242 0.2364 0.2938 REMARK 3 27 1.8145 - 1.7918 0.89 4501 237 0.2493 0.2711 REMARK 3 28 1.7918 - 1.7702 0.87 4364 230 0.2581 0.2997 REMARK 3 29 1.7702 - 1.7497 0.84 4225 222 0.2572 0.3031 REMARK 3 30 1.7497 - 1.7300 0.83 4188 221 0.2652 0.2924 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.77 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 44.17 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45660 REMARK 3 B22 (A**2) : 0.57930 REMARK 3 B33 (A**2) : -1.03590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 10377 REMARK 3 ANGLE : 1.193 14227 REMARK 3 CHIRALITY : 0.068 1586 REMARK 3 PLANARITY : 0.005 1686 REMARK 3 DIHEDRAL : 16.108 4026 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PX0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062915. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 157944 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2HVI WITH INSERTION SITE BASE PAIR, REMARK 200 METAL IONS, WATERS, AND PROTEIN RESIDUES 680-717 DELETED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MPD, MGSO4, MNSO4, REMARK 280 MES, PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.95500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.06500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.06500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.95500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 285 REMARK 465 GLU A 286 REMARK 465 SER A 287 REMARK 465 PRO A 288 REMARK 465 SER A 289 REMARK 465 SER A 290 REMARK 465 GLU A 291 REMARK 465 GLU A 292 REMARK 465 GLU A 293 REMARK 465 LYS A 294 REMARK 465 PRO A 295 REMARK 465 LEU A 296 REMARK 465 ALA A 297 REMARK 465 ASP A 680 REMARK 465 ILE A 681 REMARK 465 HIS A 682 REMARK 465 THR A 683 REMARK 465 LYS A 684 REMARK 465 THR A 685 REMARK 465 ALA A 686 REMARK 465 MET A 687 REMARK 465 ASP A 688 REMARK 465 ILE A 689 REMARK 465 PHE A 690 REMARK 465 GLN A 691 REMARK 465 VAL A 692 REMARK 465 SER A 693 REMARK 465 GLU A 694 REMARK 465 ASP A 695 REMARK 465 GLU A 696 REMARK 465 VAL A 697 REMARK 465 THR A 698 REMARK 465 PRO A 699 REMARK 465 ASN A 700 REMARK 465 MET A 701 REMARK 465 MET D 285 REMARK 465 GLU D 286 REMARK 465 SER D 287 REMARK 465 PRO D 288 REMARK 465 SER D 289 REMARK 465 SER D 290 REMARK 465 GLU D 291 REMARK 465 GLU D 292 REMARK 465 GLU D 293 REMARK 465 LYS D 294 REMARK 465 PRO D 295 REMARK 465 LEU D 296 REMARK 465 ALA D 297 REMARK 465 DC C 0 REMARK 465 DC F 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA C 1 P OP1 OP2 REMARK 470 DA F 1 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS D 664 H ARG D 859 1.32 REMARK 500 HE ARG D 596 O HOH D 247 1.37 REMARK 500 HD22 ASN A 607 O HOH A 1312 1.54 REMARK 500 HE22 GLN D 516 O HOH D 963 1.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1322 O HOH D 1323 4445 1.74 REMARK 500 O HOH A 1198 O HOH D 1412 2745 1.86 REMARK 500 O HOH A 1263 O HOH D 1267 2745 2.03 REMARK 500 O HOH A 1357 O HOH D 1348 4445 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 23 O4' - C1' - N1 ANGL. DEV. = -4.3 DEGREES REMARK 500 DC B 26 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT B 27 O4' - C4' - C3' ANGL. DEV. = -2.4 DEGREES REMARK 500 DT B 27 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT C 8 O4' - C1' - N1 ANGL. DEV. = -5.8 DEGREES REMARK 500 DG C 12 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT E 23 O4' - C1' - N1 ANGL. DEV. = -5.1 DEGREES REMARK 500 DC E 26 O4' - C1' - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 DT F 2 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT F 8 N3 - C4 - O4 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT F 8 C5 - C4 - O4 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 372 62.75 63.89 REMARK 500 ASP A 402 98.90 -169.03 REMARK 500 ALA A 421 42.13 -88.20 REMARK 500 LEU A 477 -70.49 -117.66 REMARK 500 LEU A 610 -54.00 -121.05 REMARK 500 ILE A 628 -27.55 -148.99 REMARK 500 HIS A 768 17.69 82.34 REMARK 500 HIS A 829 -54.10 79.49 REMARK 500 LEU D 312 42.96 -107.20 REMARK 500 ASP D 372 63.77 61.55 REMARK 500 ASP D 402 90.78 -170.78 REMARK 500 ALA D 421 46.50 -89.60 REMARK 500 GLN D 524 148.06 -171.71 REMARK 500 ILE D 588 -68.31 -104.61 REMARK 500 LEU D 610 -53.20 -125.38 REMARK 500 ILE D 628 -23.70 -146.91 REMARK 500 HIS D 768 19.05 84.94 REMARK 500 HIS D 829 -55.81 76.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 1 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DCP A 201 O2G REMARK 620 2 DCP A 201 O1B 82.4 REMARK 620 3 DCP A 201 O2A 86.6 80.0 REMARK 620 4 ASP A 653 OD1 100.7 171.0 108.5 REMARK 620 5 TYR A 654 O 83.4 92.2 168.1 79.8 REMARK 620 6 ASP A 830 OD2 164.7 96.4 78.2 82.8 111.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 2 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DCP D 202 O2G REMARK 620 2 DCP D 202 O2A 91.2 REMARK 620 3 DCP D 202 O1B 86.3 80.0 REMARK 620 4 ASP D 653 OD1 94.0 115.6 164.4 REMARK 620 5 TYR D 654 O 93.4 172.4 94.3 70.0 REMARK 620 6 ASP D 830 OD2 170.7 80.3 95.9 86.3 95.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCP A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PV8 RELATED DB: PDB REMARK 900 RELATED ID: 3PX4 RELATED DB: PDB REMARK 900 RELATED ID: 3PX6 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE PROTEIN WAS ISOLATED FROM A STRAIN OF REMARK 999 GEOBACILLUS SPECIES WHOSE SEQUENCE IS NOT AVAILABLE IN THE UNIPROT REMARK 999 DATABASE. IT DIFFERS FROM UNP Q5KWC1 BY THIS SINGLE RESIDUE. DBREF 3PX0 A 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 3PX0 D 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 3PX0 B 21 29 PDB 3PX0 3PX0 21 29 DBREF 3PX0 E 21 29 PDB 3PX0 3PX0 21 29 DBREF 3PX0 C 0 12 PDB 3PX0 3PX0 0 12 DBREF 3PX0 F 0 12 PDB 3PX0 3PX0 0 12 SEQADV 3PX0 ALA A 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 3PX0 TYR A 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 3PX0 HIS A 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQADV 3PX0 ALA D 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 3PX0 TYR D 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 3PX0 HIS D 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQRES 1 A 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 A 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 A 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 A 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 A 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 A 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 A 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 A 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 A 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 A 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 A 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 A 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 A 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 A 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 A 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 A 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 A 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 A 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 A 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 A 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 A 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 A 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 A 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 A 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 A 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 A 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 A 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 A 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 A 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 A 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 A 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 A 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 A 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 A 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 A 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 A 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 A 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 A 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 A 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 A 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 A 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 A 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 A 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 A 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 A 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 A 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 D 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 D 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 D 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 D 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 D 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 D 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 D 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 D 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 D 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 D 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 D 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 D 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 D 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 D 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 D 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 D 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 D 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 D 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 D 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 D 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 D 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 D 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 D 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 D 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 D 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 D 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 D 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 D 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 D 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 D 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 D 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 D 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 D 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 D 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 D 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 D 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 D 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 D 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 D 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 D 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 D 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 D 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 D 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 D 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 D 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 D 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 B 9 DC DC DT DG DA DC DT DC DOC SEQRES 1 C 13 DC DA DT DA DG DG DA DG DT DC DA DG DG SEQRES 1 E 9 DC DC DT DG DA DC DT DC DOC SEQRES 1 F 13 DC DA DT DA DG DG DA DG DT DC DA DG DG MODRES 3PX0 DOC B 29 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE MODRES 3PX0 DOC E 29 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HET DOC B 29 28 HET DOC E 29 28 HET DCP A 201 38 HET DCP A 203 40 HET MN A 1 1 HET SO4 A 2 5 HET SO4 A 3 5 HET DCP D 202 38 HET MN D 2 1 HET SO4 D 1 5 HET SO4 D 4 5 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM DCP 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION FORMUL 3 DOC 2(C9 H14 N3 O6 P) FORMUL 7 DCP 3(C9 H16 N3 O13 P3) FORMUL 9 MN 2(MN 2+) FORMUL 10 SO4 4(O4 S 2-) FORMUL 16 HOH *1368(H2 O) HELIX 1 1 THR A 308 LEU A 312 5 5 HELIX 2 2 ARG A 347 LEU A 352 1 6 HELIX 3 3 ASP A 354 ASP A 363 1 10 HELIX 4 4 ASP A 372 LYS A 383 1 12 HELIX 5 5 LEU A 394 ASP A 402 1 9 HELIX 6 6 PRO A 403 GLY A 406 5 4 HELIX 7 7 ASP A 409 MET A 416 1 8 HELIX 8 8 PRO A 424 GLY A 430 1 7 HELIX 9 9 LYS A 431 ARG A 435 5 5 HELIX 10 10 ASP A 439 ASN A 468 1 30 HELIX 11 11 GLN A 470 LEU A 477 1 8 HELIX 12 12 LEU A 477 GLY A 492 1 16 HELIX 13 13 ASP A 496 GLY A 523 1 28 HELIX 14 14 SER A 530 GLU A 540 1 11 HELIX 15 15 SER A 557 LEU A 564 1 8 HELIX 16 16 GLU A 569 ILE A 588 1 20 HELIX 17 17 ILE A 588 VAL A 595 1 8 HELIX 18 18 LEU A 630 LYS A 635 1 6 HELIX 19 19 ILE A 636 GLN A 638 5 3 HELIX 20 20 GLN A 656 GLU A 667 1 12 HELIX 21 21 ASP A 668 ARG A 677 1 10 HELIX 22 22 ARG A 703 TYR A 714 1 12 HELIX 23 23 SER A 717 LEU A 725 1 9 HELIX 24 24 SER A 728 PHE A 743 1 16 HELIX 25 25 PHE A 743 GLY A 761 1 19 HELIX 26 26 PRO A 774 SER A 778 5 5 HELIX 27 27 ASN A 780 GLU A 818 1 39 HELIX 28 28 GLU A 840 GLN A 854 1 15 HELIX 29 29 THR D 308 LEU D 312 5 5 HELIX 30 30 ARG D 347 LEU D 352 1 6 HELIX 31 31 ASP D 354 ASP D 363 1 10 HELIX 32 32 ASP D 372 LYS D 383 1 12 HELIX 33 33 LEU D 394 ASP D 402 1 9 HELIX 34 34 PRO D 403 GLY D 406 5 4 HELIX 35 35 ASP D 409 MET D 416 1 8 HELIX 36 36 PRO D 424 GLY D 430 1 7 HELIX 37 37 LYS D 431 ARG D 435 5 5 HELIX 38 38 ASP D 439 ASN D 468 1 30 HELIX 39 39 GLN D 470 LEU D 477 1 8 HELIX 40 40 LEU D 477 GLY D 492 1 16 HELIX 41 41 ASP D 496 GLY D 523 1 28 HELIX 42 42 SER D 530 GLU D 540 1 11 HELIX 43 43 SER D 557 LEU D 564 1 8 HELIX 44 44 GLU D 569 TYR D 587 1 19 HELIX 45 45 ILE D 588 VAL D 595 1 8 HELIX 46 46 LEU D 630 LYS D 635 1 6 HELIX 47 47 ILE D 636 GLN D 638 5 3 HELIX 48 48 GLN D 656 GLU D 667 1 12 HELIX 49 49 ASP D 668 ARG D 677 1 10 HELIX 50 50 ASP D 680 PHE D 690 1 11 HELIX 51 51 SER D 693 VAL D 697 5 5 HELIX 52 52 THR D 698 TYR D 714 1 17 HELIX 53 53 SER D 717 LEU D 725 1 9 HELIX 54 54 SER D 728 PHE D 743 1 16 HELIX 55 55 PHE D 743 GLY D 761 1 19 HELIX 56 56 PRO D 774 SER D 778 5 5 HELIX 57 57 ASN D 780 GLU D 818 1 39 HELIX 58 58 GLU D 840 GLN D 854 1 15 SHEET 1 A 6 THR A 302 LEU A 303 0 SHEET 2 A 6 GLY A 342 LEU A 346 1 O ARG A 343 N THR A 302 SHEET 3 A 6 GLY A 334 ASN A 339 -1 N VAL A 337 O PHE A 344 SHEET 4 A 6 LYS A 315 GLU A 321 -1 N ALA A 317 O VAL A 338 SHEET 5 A 6 LYS A 367 MET A 370 1 O SER A 369 N ALA A 316 SHEET 6 A 6 VAL A 390 ASP A 393 1 O PHE A 392 N MET A 370 SHEET 1 B 3 LYS A 601 VAL A 602 0 SHEET 2 B 3 VAL A 493 VAL A 495 -1 N VAL A 493 O VAL A 602 SHEET 3 B 3 PHE A 640 VAL A 641 -1 O VAL A 641 N LYS A 494 SHEET 1 C 2 LYS A 549 THR A 550 0 SHEET 2 C 2 GLY A 553 TYR A 554 -1 O GLY A 553 N THR A 550 SHEET 1 D 2 ILE A 605 ASN A 607 0 SHEET 2 D 2 SER A 617 THR A 619 -1 O THR A 619 N ILE A 605 SHEET 1 E 4 HIS A 823 GLN A 827 0 SHEET 2 E 4 GLU A 831 PRO A 837 -1 O ILE A 833 N LEU A 825 SHEET 3 E 4 TRP A 647 TYR A 654 -1 N PHE A 650 O LEU A 834 SHEET 4 E 4 VAL A 864 GLY A 869 -1 O ASP A 865 N ASP A 653 SHEET 1 F 2 TYR A 762 THR A 764 0 SHEET 2 F 2 ARG A 770 TYR A 772 -1 O ARG A 771 N VAL A 763 SHEET 1 G 6 THR D 302 ALA D 304 0 SHEET 2 G 6 GLY D 342 LEU D 346 1 O PHE D 345 N THR D 302 SHEET 3 G 6 GLY D 334 ASN D 339 -1 N VAL D 337 O PHE D 344 SHEET 4 G 6 LYS D 315 GLU D 321 -1 N ALA D 317 O VAL D 338 SHEET 5 G 6 LYS D 367 MET D 370 1 O SER D 369 N ALA D 316 SHEET 6 G 6 VAL D 390 ASP D 393 1 O PHE D 392 N MET D 370 SHEET 1 H 3 LYS D 601 VAL D 602 0 SHEET 2 H 3 VAL D 493 VAL D 495 -1 N VAL D 493 O VAL D 602 SHEET 3 H 3 PHE D 640 VAL D 641 -1 O VAL D 641 N LYS D 494 SHEET 1 I 2 LYS D 549 THR D 550 0 SHEET 2 I 2 GLY D 553 TYR D 554 -1 O GLY D 553 N THR D 550 SHEET 1 J 2 ILE D 605 ASN D 607 0 SHEET 2 J 2 SER D 617 THR D 619 -1 O THR D 619 N ILE D 605 SHEET 1 K 4 HIS D 823 GLN D 827 0 SHEET 2 K 4 GLU D 831 PRO D 837 -1 O ILE D 833 N LEU D 825 SHEET 3 K 4 TRP D 647 TYR D 654 -1 N PHE D 650 O LEU D 834 SHEET 4 K 4 VAL D 864 GLY D 869 -1 O HIS D 867 N ALA D 651 SHEET 1 L 2 TYR D 762 THR D 764 0 SHEET 2 L 2 ARG D 770 TYR D 772 -1 O ARG D 771 N VAL D 763 LINK O3' DC B 28 P DOC B 29 1555 1555 1.61 LINK O3' DC E 28 P DOC E 29 1555 1555 1.61 LINK MN MN A 1 O2G DCP A 201 1555 1555 2.09 LINK MN MN A 1 O1B DCP A 201 1555 1555 2.35 LINK MN MN A 1 O2A DCP A 201 1555 1555 2.40 LINK MN MN A 1 OD1AASP A 653 1555 1555 2.32 LINK MN MN A 1 O TYR A 654 1555 1555 2.08 LINK MN MN A 1 OD2 ASP A 830 1555 1555 2.00 LINK MN MN D 2 O2G DCP D 202 1555 1555 2.18 LINK MN MN D 2 O2A DCP D 202 1555 1555 2.26 LINK MN MN D 2 O1B DCP D 202 1555 1555 2.30 LINK MN MN D 2 OD1BASP D 653 1555 1555 2.35 LINK MN MN D 2 O TYR D 654 1555 1555 2.20 LINK MN MN D 2 OD2 ASP D 830 1555 1555 2.07 CISPEP 1 GLU A 620 PRO A 621 0 4.35 CISPEP 2 GLU D 620 PRO D 621 0 1.12 SITE 1 AC1 21 MN A 1 HOH A 92 ARG A 615 ASP A 653 SITE 2 AC1 21 TYR A 654 SER A 655 GLN A 656 ILE A 657 SITE 3 AC1 21 GLU A 658 ARG A 702 LYS A 706 TYR A 710 SITE 4 AC1 21 ASP A 830 HOH A 901 HOH A 954 HOH A 977 SITE 5 AC1 21 HOH A1106 HOH A1112 DOC B 29 DA C 3 SITE 6 AC1 21 DG C 4 SITE 1 AC2 10 GLU A 469 GLN A 470 ASP A 471 ARG A 472 SITE 2 AC2 10 LEU A 473 LEU A 767 HIS A 768 HOH A 959 SITE 3 AC2 10 HOH A1069 HOH A1254 SITE 1 AC3 4 DCP A 201 ASP A 653 TYR A 654 ASP A 830 SITE 1 AC4 5 ARG A 779 ASN A 780 HOH A1111 ARG D 423 SITE 2 AC4 5 PRO D 424 SITE 1 AC5 23 MN D 2 HOH D 13 HOH D 112 HOH D 139 SITE 2 AC5 23 HOH D 244 ARG D 615 ASP D 653 TYR D 654 SITE 3 AC5 23 SER D 655 GLN D 656 ILE D 657 GLU D 658 SITE 4 AC5 23 HIS D 682 ARG D 702 LYS D 706 TYR D 710 SITE 5 AC5 23 ASP D 830 HOH D1152 HOH D1246 HOH D1335 SITE 6 AC5 23 DOC E 29 DA F 3 DG F 4 SITE 1 AC6 4 DCP D 202 ASP D 653 TYR D 654 ASP D 830 SITE 1 AC7 3 ARG A 517 ASN A 573 LYS D 730 SITE 1 AC8 6 LYS D 298 MET D 299 ALA D 300 ARG D 343 SITE 2 AC8 6 ARG D 677 HOH D1398 SITE 1 AC9 4 HOH D 69 ARG D 306 THR D 308 GLU D 309 CRYST1 93.910 108.960 150.130 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010648 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006661 0.00000