HEADER ISOMERASE/DNA 09-DEC-10 3PX7 TITLE CRYSTAL STRUCTURE OF COVALENT COMPLEX OF TOPOISOMERASE 1A WITH TITLE 2 SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-595; COMPND 5 EC: 5.99.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA 5'-D(*TP*TP*GP*GP*G)-3'; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA 5'-D(*A*AP*TP*GP*CP*GP*CP*T)-3'; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI DH1; SOURCE 3 ORGANISM_TAXID: 536056; SOURCE 4 STRAIN: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1; SOURCE 5 GENE: 415337, ECDH1_2375; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES KEYWDS TOPOISOMERASE, ISOMERASE, ISOMERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,Y.C.TSE-DINH,B.CHENG REVDAT 3 30-OCT-24 3PX7 1 REMARK SEQADV LINK REVDAT 2 08-NOV-17 3PX7 1 REMARK REVDAT 1 20-APR-11 3PX7 0 JRNL AUTH Y.C.TSE-DINH,Z.ZHANG,B.CHENG JRNL TITL STRUCTURE OF E. COLI TOPOISOMERASE I TRAPPED AS COVALENT JRNL TITL 2 COMPLEX INTERMEDIATE WITH CLEAVED DNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 500.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 65028 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.400 REMARK 3 FREE R VALUE TEST SET COUNT : 6470 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 859 REMARK 3 BIN R VALUE (WORKING SET) : 0.2885 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 107 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4407 REMARK 3 NUCLEIC ACID ATOMS : 176 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.76900 REMARK 3 B22 (A**2) : 9.23500 REMARK 3 B33 (A**2) : -0.46600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.433 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.372 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.382 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.532 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 52.96 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP_MOD.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PX7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65028 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 500.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 36.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 20% PEG4K, PH REMARK 280 6, VAPOR DIFFUSION, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.80100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.98800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.87950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.98800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.80100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.87950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 39 REMARK 465 SER A 40 REMARK 465 GLY A 41 REMARK 465 SER A 42 REMARK 465 ALA A 43 REMARK 465 ALA A 44 REMARK 465 LYS A 45 REMARK 465 LYS A 46 REMARK 465 SER A 47 REMARK 465 ALA A 48 REMARK 465 ASP A 49 REMARK 465 SER A 50 REMARK 465 THR A 51 REMARK 465 SER A 52 REMARK 465 THR A 53 REMARK 465 LYS A 54 REMARK 465 THR A 55 REMARK 465 ALA A 56 REMARK 465 LYS A 57 REMARK 465 LYS A 58 REMARK 465 PRO A 59 REMARK 465 LYS A 60 REMARK 465 LYS A 61 REMARK 465 SER A 357 REMARK 465 LYS A 358 REMARK 465 GLU A 359 REMARK 465 ASN A 360 REMARK 465 SER A 361 REMARK 465 GLN A 362 REMARK 465 GLU A 363 REMARK 465 ALA A 364 REMARK 465 ARG A 442 REMARK 465 LYS A 443 REMARK 465 GLY A 444 REMARK 465 ASP A 445 REMARK 465 GLU A 446 REMARK 465 ASP A 447 REMARK 465 GLN A 591 REMARK 465 MET A 592 REMARK 465 VAL A 593 REMARK 465 LEU A 594 REMARK 465 THR A 595 REMARK 465 DG B 3 REMARK 465 DG B 4 REMARK 465 DG B 5 REMARK 465 DA C 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA C 2 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 1 C3' - O3' - P ANGL. DEV. = 10.2 DEGREES REMARK 500 DC C 5 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 20 29.90 -65.49 REMARK 500 LEU A 21 -20.87 -155.84 REMARK 500 SER A 23 -165.96 -71.91 REMARK 500 ASP A 24 -30.05 77.90 REMARK 500 ILE A 34 -31.92 66.84 REMARK 500 PRO A 87 4.57 -54.48 REMARK 500 LYS A 102 20.47 -69.74 REMARK 500 ALA A 146 -54.22 -120.16 REMARK 500 ARG A 247 74.05 -155.74 REMARK 500 PTR A 319 135.18 -22.57 REMARK 500 PHE A 534 55.12 -142.62 REMARK 500 HIS A 556 29.20 47.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 596 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 281 O REMARK 620 2 CYS A 401 SG 90.1 REMARK 620 3 CYS A 401 O 104.8 72.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 6 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT B 1 N3 REMARK 620 2 DT B 2 O4 90.4 REMARK 620 3 DT C 8 O4 91.9 156.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG C 9 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 8 N3 REMARK 620 2 DT C 8 O4 44.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 596 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG C 9 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ECL RELATED DB: PDB REMARK 900 RELATED ID: 1CY0 RELATED DB: PDB REMARK 900 RELATED ID: 1CY4 RELATED DB: PDB DBREF 3PX7 A 1 595 UNP C9QXS7 C9QXS7_ECOD1 1 595 DBREF 3PX7 B 1 5 PDB 3PX7 3PX7 1 5 DBREF 3PX7 C 1 8 PDB 3PX7 3PX7 1 8 SEQADV 3PX7 ASN A 111 UNP C9QXS7 ASP 111 ENGINEERED MUTATION SEQRES 1 A 595 MET GLY LYS ALA LEU VAL ILE VAL GLU SER PRO ALA LYS SEQRES 2 A 595 ALA LYS THR ILE ASN LYS TYR LEU GLY SER ASP TYR VAL SEQRES 3 A 595 VAL LYS SER SER VAL GLY HIS ILE ARG ASP LEU PRO THR SEQRES 4 A 595 SER GLY SER ALA ALA LYS LYS SER ALA ASP SER THR SER SEQRES 5 A 595 THR LYS THR ALA LYS LYS PRO LYS LYS ASP GLU ARG GLY SEQRES 6 A 595 ALA LEU VAL ASN ARG MET GLY VAL ASP PRO TRP HIS ASN SEQRES 7 A 595 TRP GLU ALA HIS TYR GLU VAL LEU PRO GLY LYS GLU LYS SEQRES 8 A 595 VAL VAL SER GLU LEU LYS GLN LEU ALA GLU LYS ALA ASP SEQRES 9 A 595 HIS ILE TYR LEU ALA THR ASN LEU ASP ARG GLU GLY GLU SEQRES 10 A 595 ALA ILE ALA TRP HIS LEU ARG GLU VAL ILE GLY GLY ASP SEQRES 11 A 595 ASP ALA ARG TYR SER ARG VAL VAL PHE ASN GLU ILE THR SEQRES 12 A 595 LYS ASN ALA ILE ARG GLN ALA PHE ASN LYS PRO GLY GLU SEQRES 13 A 595 LEU ASN ILE ASP ARG VAL ASN ALA GLN GLN ALA ARG ARG SEQRES 14 A 595 PHE MET ASP ARG VAL VAL GLY TYR MET VAL SER PRO LEU SEQRES 15 A 595 LEU TRP LYS LYS ILE ALA ARG GLY LEU SER ALA GLY ARG SEQRES 16 A 595 VAL GLN SER VAL ALA VAL ARG LEU VAL VAL GLU ARG GLU SEQRES 17 A 595 ARG GLU ILE LYS ALA PHE VAL PRO GLU GLU PHE TRP GLU SEQRES 18 A 595 VAL ASP ALA SER THR THR THR PRO SER GLY GLU ALA LEU SEQRES 19 A 595 ALA LEU GLN VAL THR HIS GLN ASN ASP LYS PRO PHE ARG SEQRES 20 A 595 PRO VAL ASN LYS GLU GLN THR GLN ALA ALA VAL SER LEU SEQRES 21 A 595 LEU GLU LYS ALA ARG TYR SER VAL LEU GLU ARG GLU ASP SEQRES 22 A 595 LYS PRO THR THR SER LYS PRO GLY ALA PRO PHE ILE THR SEQRES 23 A 595 SER THR LEU GLN GLN ALA ALA SER THR ARG LEU GLY PHE SEQRES 24 A 595 GLY VAL LYS LYS THR MET MET MET ALA GLN ARG LEU TYR SEQRES 25 A 595 GLU ALA GLY TYR ILE THR PTR MET ARG THR ASP SER THR SEQRES 26 A 595 ASN LEU SER GLN ASP ALA VAL ASN MET VAL ARG GLY TYR SEQRES 27 A 595 ILE SER ASP ASN PHE GLY LYS LYS TYR LEU PRO GLU SER SEQRES 28 A 595 PRO ASN GLN TYR ALA SER LYS GLU ASN SER GLN GLU ALA SEQRES 29 A 595 HIS GLU ALA ILE ARG PRO SER ASP VAL ASN VAL MET ALA SEQRES 30 A 595 GLU SER LEU LYS ASP MET GLU ALA ASP ALA GLN LYS LEU SEQRES 31 A 595 TYR GLN LEU ILE TRP ARG GLN PHE VAL ALA CYS GLN MET SEQRES 32 A 595 THR PRO ALA LYS TYR ASP SER THR THR LEU THR VAL GLY SEQRES 33 A 595 ALA GLY ASP PHE ARG LEU LYS ALA ARG GLY ARG ILE LEU SEQRES 34 A 595 ARG PHE ASP GLY TRP THR LYS VAL MET PRO ALA LEU ARG SEQRES 35 A 595 LYS GLY ASP GLU ASP ARG ILE LEU PRO ALA VAL ASN LYS SEQRES 36 A 595 GLY ASP ALA LEU THR LEU VAL GLU LEU THR PRO ALA GLN SEQRES 37 A 595 HIS PHE THR LYS PRO PRO ALA ARG PHE SER GLU ALA SER SEQRES 38 A 595 LEU VAL LYS GLU LEU GLU LYS ARG GLY ILE GLY ARG PRO SEQRES 39 A 595 SER THR TYR ALA SER ILE ILE SER THR ILE GLN ASP ARG SEQRES 40 A 595 GLY TYR VAL ARG VAL GLU ASN ARG ARG PHE TYR ALA GLU SEQRES 41 A 595 LYS MET GLY GLU ILE VAL THR ASP ARG LEU GLU GLU ASN SEQRES 42 A 595 PHE ARG GLU LEU MET ASN TYR ASP PHE THR ALA GLN MET SEQRES 43 A 595 GLU ASN SER LEU ASP GLN VAL ALA ASN HIS GLU ALA GLU SEQRES 44 A 595 TRP LYS ALA VAL LEU ASP HIS PHE PHE SER ASP PHE THR SEQRES 45 A 595 GLN GLN LEU ASP LYS ALA GLU LYS ASP PRO GLU GLU GLY SEQRES 46 A 595 GLY MET ARG PRO ASN GLN MET VAL LEU THR SEQRES 1 B 5 DT DT DG DG DG SEQRES 1 C 8 DA DA DT DG DC DG DC DT MODRES 3PX7 PTR A 319 TYR O-PHOSPHOTYROSINE HET PTR A 319 16 HET HG A 596 1 HET HG B 6 1 HET HG C 9 1 HETNAM PTR O-PHOSPHOTYROSINE HETNAM HG MERCURY (II) ION HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR C9 H12 N O6 P FORMUL 4 HG 3(HG 2+) FORMUL 7 HOH *140(H2 O) HELIX 1 1 SER A 10 TYR A 20 1 11 HELIX 2 2 ARG A 64 GLY A 72 1 9 HELIX 3 3 LYS A 89 ALA A 100 1 12 HELIX 4 4 ASP A 113 GLY A 128 1 16 HELIX 5 5 ASP A 130 ALA A 132 5 3 HELIX 6 6 THR A 143 LYS A 153 1 11 HELIX 7 7 ASN A 158 ILE A 187 1 30 HELIX 8 8 VAL A 196 ALA A 213 1 18 HELIX 9 9 ASN A 250 ALA A 264 1 15 HELIX 10 10 ILE A 285 GLY A 298 1 14 HELIX 11 11 GLY A 300 ALA A 314 1 15 HELIX 12 12 SER A 328 PHE A 343 1 16 HELIX 13 13 GLY A 344 LEU A 348 5 5 HELIX 14 14 MET A 376 LEU A 380 5 5 HELIX 15 15 GLU A 384 CYS A 401 1 18 HELIX 16 16 ASP A 432 VAL A 437 5 6 HELIX 17 17 SER A 478 ARG A 489 1 12 HELIX 18 18 THR A 496 ARG A 507 1 12 HELIX 19 19 GLU A 520 PHE A 534 1 15 HELIX 20 20 ASP A 541 ASN A 555 1 15 HELIX 21 21 GLU A 559 LYS A 580 1 22 HELIX 22 22 ASP A 581 GLY A 585 5 5 SHEET 1 A 4 TYR A 25 SER A 29 0 SHEET 2 A 4 LYS A 3 VAL A 8 1 N ALA A 4 O VAL A 26 SHEET 3 A 4 ALA A 103 LEU A 108 1 O TYR A 107 N LEU A 5 SHEET 4 A 4 TYR A 134 ARG A 136 1 O SER A 135 N LEU A 108 SHEET 1 B 2 ARG A 35 ASP A 36 0 SHEET 2 B 2 GLU A 84 VAL A 85 -1 O GLU A 84 N ASP A 36 SHEET 1 C 8 LYS A 244 PRO A 245 0 SHEET 2 C 8 ALA A 233 GLN A 241 -1 N GLN A 241 O LYS A 244 SHEET 3 C 8 PHE A 420 PHE A 431 -1 O ARG A 421 N THR A 239 SHEET 4 C 8 ALA A 406 ALA A 417 -1 N LEU A 413 O ALA A 424 SHEET 5 C 8 TYR A 266 SER A 278 -1 N THR A 276 O TYR A 408 SHEET 6 C 8 ALA A 458 PHE A 470 -1 O LEU A 459 N TYR A 266 SHEET 7 C 8 GLU A 218 THR A 227 -1 N SER A 225 O VAL A 462 SHEET 8 C 8 ALA A 233 GLN A 241 -1 O VAL A 238 N VAL A 222 SHEET 1 D 2 VAL A 510 GLU A 513 0 SHEET 2 D 2 ARG A 516 ALA A 519 -1 O ARG A 516 N GLU A 513 LINK C THR A 318 N PTR A 319 1555 1555 1.37 LINK C PTR A 319 N MET A 320 1555 1555 1.32 LINK O3P PTR A 319 C5' DT B 1 1555 1555 1.68 LINK O GLY A 281 HG HG A 596 1555 1555 3.10 LINK SG CYS A 401 HG HG A 596 1555 1555 2.66 LINK O CYS A 401 HG HG A 596 1555 1555 2.88 LINK N3 DT B 1 HG HG B 6 1555 1555 2.67 LINK O4 DT B 2 HG HG B 6 1555 1555 2.72 LINK HG HG B 6 O4 DT C 8 1555 1555 3.18 LINK N3 DT C 8 HG HG C 9 1555 1555 2.46 LINK O4 DT C 8 HG HG C 9 1555 1555 3.18 SITE 1 AC1 3 GLY A 281 TYR A 355 CYS A 401 SITE 1 AC2 4 DT B 1 DT B 2 DT C 8 HG C 9 SITE 1 AC3 2 HG B 6 DT C 8 CRYST1 61.602 91.759 141.976 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016233 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010898 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007043 0.00000