data_3PXB # _entry.id 3PXB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PXB RCSB RCSB062926 WWPDB D_1000062926 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T2V . unspecified PDB 1T15 . unspecified PDB 1N5O . unspecified PDB 1T2U . unspecified PDB 2ING . unspecified PDB 3PXA . unspecified PDB 3PXC . unspecified PDB 3PXD . unspecified PDB 3PXE . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PXB _pdbx_database_status.recvd_initial_deposition_date 2010-12-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Coquelle, N.' 1 'Green, R.' 2 'Glover, J.N.M.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Impact of BRCA1 BRCT Domain Missense Substitutions on Phosphopeptide Recognition.' Biochemistry 50 4579 4589 2011 BICHAW US 0006-2960 0033 ? 21473589 10.1021/bi2003795 1 'Comprehensive analysis of missense variations in the BRCT domain of BRCA1 by structural and functional assays.' 'Cancer Res.' 70 4880 4890 2010 CNREA8 US 0008-5472 0400 ? 20516115 10.1158/0008-5472.CAN-09-4563 2 'Structural basis of phosphopeptide recognition by the BRCT domain of BRCA1.' Nat.Struct.Mol.Biol. 11 519 525 2004 ? US 1545-9993 ? ? 15133503 10.1038/nsmb776 3 'Structure and mechanism of BRCA1 BRCT domain recognition of phosphorylated BACH1 with implications for cancer.' Nat.Struct.Mol.Biol. 11 512 518 2004 ? US 1545-9993 ? ? 15133502 10.1038/nsmb775 4 'Structural consequences of a cancer-causing BRCA1-BRCT missense mutation.' J.Biol.Chem. 278 2630 2635 2003 JBCHA3 US 0021-9258 0071 ? 12427738 10.1074/jbc.M210019200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Coquelle, N.' 1 primary 'Green, R.' 2 primary 'Glover, J.N.' 3 1 'Lee, M.S.' 4 1 'Green, R.' 5 1 'Marsillac, S.M.' 6 1 'Coquelle, N.' 7 1 'Williams, R.S.' 8 1 'Yeung, T.' 9 1 'Foo, D.' 10 1 'Hau, D.D.' 11 1 'Hui, B.' 12 1 'Monteiro, A.N.' 13 1 'Glover, J.N.' 14 2 'Williams, R.S.' 15 2 'Lee, M.S.' 16 2 'Hau, D.D.' 17 2 'Glover, J.N.' 18 3 'Clapperton, J.A.' 19 3 'Manke, I.A.' 20 3 'Lowery, D.M.' 21 3 'Ho, T.' 22 3 'Haire, L.F.' 23 3 'Yaffe, M.B.' 24 3 'Smerdon, S.J.' 25 4 'Williams, R.S.' 26 4 'Glover, J.N.' 27 # _cell.entry_id 3PXB _cell.length_a 114.380 _cell.length_b 114.380 _cell.length_c 122.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PXB _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Breast cancer type 1 susceptibility protein' 24501.207 1 6.3.2.- T1700A 'BRCT domain, UNP residues 1646-1859' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 4 water nat water 18.015 14 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RING finger protein 53' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERALKYFLGIAGGKWVVSYFWVTQSIKE RKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVH PIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; _entity_poly.pdbx_seq_one_letter_code_can ;VNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERALKYFLGIAGGKWVVSYFWVTQSIKE RKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVH PIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ASN n 1 3 LYS n 1 4 ARG n 1 5 MET n 1 6 SER n 1 7 MET n 1 8 VAL n 1 9 VAL n 1 10 SER n 1 11 GLY n 1 12 LEU n 1 13 THR n 1 14 PRO n 1 15 GLU n 1 16 GLU n 1 17 PHE n 1 18 MET n 1 19 LEU n 1 20 VAL n 1 21 TYR n 1 22 LYS n 1 23 PHE n 1 24 ALA n 1 25 ARG n 1 26 LYS n 1 27 HIS n 1 28 HIS n 1 29 ILE n 1 30 THR n 1 31 LEU n 1 32 THR n 1 33 ASN n 1 34 LEU n 1 35 ILE n 1 36 THR n 1 37 GLU n 1 38 GLU n 1 39 THR n 1 40 THR n 1 41 HIS n 1 42 VAL n 1 43 VAL n 1 44 MET n 1 45 LYS n 1 46 THR n 1 47 ASP n 1 48 ALA n 1 49 GLU n 1 50 PHE n 1 51 VAL n 1 52 CYS n 1 53 GLU n 1 54 ARG n 1 55 ALA n 1 56 LEU n 1 57 LYS n 1 58 TYR n 1 59 PHE n 1 60 LEU n 1 61 GLY n 1 62 ILE n 1 63 ALA n 1 64 GLY n 1 65 GLY n 1 66 LYS n 1 67 TRP n 1 68 VAL n 1 69 VAL n 1 70 SER n 1 71 TYR n 1 72 PHE n 1 73 TRP n 1 74 VAL n 1 75 THR n 1 76 GLN n 1 77 SER n 1 78 ILE n 1 79 LYS n 1 80 GLU n 1 81 ARG n 1 82 LYS n 1 83 MET n 1 84 LEU n 1 85 ASN n 1 86 GLU n 1 87 HIS n 1 88 ASP n 1 89 PHE n 1 90 GLU n 1 91 VAL n 1 92 ARG n 1 93 GLY n 1 94 ASP n 1 95 VAL n 1 96 VAL n 1 97 ASN n 1 98 GLY n 1 99 ARG n 1 100 ASN n 1 101 HIS n 1 102 GLN n 1 103 GLY n 1 104 PRO n 1 105 LYS n 1 106 ARG n 1 107 ALA n 1 108 ARG n 1 109 GLU n 1 110 SER n 1 111 GLN n 1 112 ASP n 1 113 ARG n 1 114 LYS n 1 115 ILE n 1 116 PHE n 1 117 ARG n 1 118 GLY n 1 119 LEU n 1 120 GLU n 1 121 ILE n 1 122 CYS n 1 123 CYS n 1 124 TYR n 1 125 GLY n 1 126 PRO n 1 127 PHE n 1 128 THR n 1 129 ASN n 1 130 MET n 1 131 PRO n 1 132 THR n 1 133 ASP n 1 134 GLN n 1 135 LEU n 1 136 GLU n 1 137 TRP n 1 138 MET n 1 139 VAL n 1 140 GLN n 1 141 LEU n 1 142 CYS n 1 143 GLY n 1 144 ALA n 1 145 SER n 1 146 VAL n 1 147 VAL n 1 148 LYS n 1 149 GLU n 1 150 LEU n 1 151 SER n 1 152 SER n 1 153 PHE n 1 154 THR n 1 155 LEU n 1 156 GLY n 1 157 THR n 1 158 GLY n 1 159 VAL n 1 160 HIS n 1 161 PRO n 1 162 ILE n 1 163 VAL n 1 164 VAL n 1 165 VAL n 1 166 GLN n 1 167 PRO n 1 168 ASP n 1 169 ALA n 1 170 TRP n 1 171 THR n 1 172 GLU n 1 173 ASP n 1 174 ASN n 1 175 GLY n 1 176 PHE n 1 177 HIS n 1 178 ALA n 1 179 ILE n 1 180 GLY n 1 181 GLN n 1 182 MET n 1 183 CYS n 1 184 GLU n 1 185 ALA n 1 186 PRO n 1 187 VAL n 1 188 VAL n 1 189 THR n 1 190 ARG n 1 191 GLU n 1 192 TRP n 1 193 VAL n 1 194 LEU n 1 195 ASP n 1 196 SER n 1 197 VAL n 1 198 ALA n 1 199 LEU n 1 200 TYR n 1 201 GLN n 1 202 CYS n 1 203 GLN n 1 204 GLU n 1 205 LEU n 1 206 ASP n 1 207 THR n 1 208 TYR n 1 209 LEU n 1 210 ILE n 1 211 PRO n 1 212 GLN n 1 213 ILE n 1 214 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRCA1, RNF53' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pLM1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRCA1_HUMAN _struct_ref.pdbx_db_accession P38398 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKE RKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVH PIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; _struct_ref.pdbx_align_begin 1646 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3PXB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 214 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38398 _struct_ref_seq.db_align_beg 1646 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1859 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1646 _struct_ref_seq.pdbx_auth_seq_align_end 1859 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3PXB _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 55 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P38398 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 1700 _struct_ref_seq_dif.details 'ENGINEERED MUTATION' _struct_ref_seq_dif.pdbx_auth_seq_num 1700 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PXB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.71 _exptl_crystal.density_percent_sol 73.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details ;0.8 M Li2SO4 100 mM TRIS 5mM CaCl2 10 mM NiCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97934 # _reflns.entry_id 3PXB _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 37.704 _reflns.d_resolution_high 2.5 _reflns.number_obs 16748 _reflns.number_all 16748 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_sigmaI 14.7 _reflns.B_iso_Wilson_estimate 64.5 _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.5 2.55 99.8 ? ? ? ? ? ? ? ? ? ? 1 1 2.55 2.7 99.8 ? ? ? ? ? ? ? ? ? ? 2 1 2.7 3.00 99.7 ? ? ? ? ? ? ? ? ? ? 3 1 3.00 4.00 99.6 ? ? ? ? ? ? ? ? ? ? 4 1 4.00 40.00 99.5 ? ? ? ? ? ? ? ? ? ? 5 1 # _refine.entry_id 3PXB _refine.ls_number_reflns_obs 16748 _refine.ls_number_reflns_all 16748 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.704 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 99.18 _refine.ls_R_factor_obs 0.2374 _refine.ls_R_factor_all 0.2374 _refine.ls_R_factor_R_work 0.2354 _refine.ls_R_factor_R_free 0.2742 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 839 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 3.2306 _refine.aniso_B[2][2] 3.2306 _refine.aniso_B[3][3] -6.4613 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.345 _refine.solvent_model_param_bsol 56.236 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 1N5O _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.41 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1621 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 1641 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 37.704 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 1663 'X-RAY DIFFRACTION' ? f_angle_d 1.135 ? ? 2260 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.700 ? ? 590 'X-RAY DIFFRACTION' ? f_chiral_restr 0.077 ? ? 257 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 286 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.5001 2.6567 2594 0.3257 100.00 0.3580 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.6567 2.8617 2607 0.3067 100.00 0.3778 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.8617 3.1496 2618 0.2851 99.00 0.3117 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.1496 3.6050 2651 0.2609 100.00 0.3117 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.6050 4.5407 2668 0.2040 99.00 0.2517 . . 141 . . . . 'X-RAY DIFFRACTION' . 4.5407 37.7084 2771 0.2100 97.00 0.2336 . . 146 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3PXB _struct.title 'Impact of BRCA1 BRCT domain missense substitutions on phospho-peptide recognition: T1700A' _struct.pdbx_descriptor 'Breast cancer type 1 susceptibility protein (E.C.6.3.2.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PXB _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'BRCA1 protein, Missense, phosphopeptide recognition, BRCT tandem repeat, BACH1 Ctip Abraxas, Nuclear protein, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 13 ? HIS A 28 ? THR A 1658 HIS A 1673 1 ? 16 HELX_P HELX_P2 2 ALA A 55 ? GLY A 64 ? ALA A 1700 GLY A 1709 1 ? 10 HELX_P HELX_P3 3 TYR A 71 ? GLU A 80 ? TYR A 1716 GLU A 1725 1 ? 10 HELX_P HELX_P4 4 ASN A 85 ? PHE A 89 ? ASN A 1730 PHE A 1734 5 ? 5 HELX_P HELX_P5 5 GLN A 102 ? SER A 110 ? GLN A 1747 SER A 1755 1 ? 9 HELX_P HELX_P6 6 PRO A 131 ? CYS A 142 ? PRO A 1776 CYS A 1787 1 ? 12 HELX_P HELX_P7 7 GLU A 149 ? PHE A 153 ? GLU A 1794 PHE A 1798 5 ? 5 HELX_P HELX_P8 8 GLN A 166 ? TRP A 170 ? GLN A 1811 TRP A 1815 5 ? 5 HELX_P HELX_P9 9 ARG A 190 ? TYR A 200 ? ARG A 1835 TYR A 1845 1 ? 11 HELX_P HELX_P10 10 GLU A 204 ? LEU A 209 ? GLU A 1849 LEU A 1854 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 160 _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id NI _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id NI _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 1805 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NI _struct_conn.ptnr2_auth_seq_id 21 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.236 _struct_conn.pdbx_value_order ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 30 ? LEU A 31 ? THR A 1675 LEU A 1676 A 2 SER A 6 ? SER A 10 ? SER A 1651 SER A 1655 A 3 HIS A 41 ? MET A 44 ? HIS A 1686 MET A 1689 A 4 TRP A 67 ? SER A 70 ? TRP A 1712 SER A 1715 B 1 VAL A 51 ? CYS A 52 ? VAL A 1696 CYS A 1697 B 2 GLY A 93 ? ASP A 94 ? GLY A 1738 ASP A 1739 C 1 ALA A 144 ? VAL A 146 ? ALA A 1789 VAL A 1791 C 2 LEU A 119 ? CYS A 123 ? LEU A 1764 CYS A 1768 C 3 HIS A 160 ? VAL A 165 ? HIS A 1805 VAL A 1810 C 4 VAL A 187 ? THR A 189 ? VAL A 1832 THR A 1834 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 30 ? O THR A 1675 N MET A 7 ? N MET A 1652 A 2 3 N SER A 6 ? N SER A 1651 O HIS A 41 ? O HIS A 1686 A 3 4 N VAL A 42 ? N VAL A 1687 O TRP A 67 ? O TRP A 1712 B 1 2 N CYS A 52 ? N CYS A 1697 O GLY A 93 ? O GLY A 1738 C 1 2 O SER A 145 ? O SER A 1790 N LEU A 119 ? N LEU A 1764 C 2 3 N GLU A 120 ? N GLU A 1765 O HIS A 160 ? O HIS A 1805 C 3 4 N VAL A 163 ? N VAL A 1808 O VAL A 188 ? O VAL A 1833 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 20' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NI A 21' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH D . ? HOH A 1 . ? 1_555 ? 2 AC1 4 HOH D . ? HOH A 11 . ? 1_555 ? 3 AC1 4 SER A 10 ? SER A 1655 . ? 1_555 ? 4 AC1 4 GLY A 11 ? GLY A 1656 . ? 1_555 ? 5 AC2 2 HIS A 28 ? HIS A 1673 . ? 5_554 ? 6 AC2 2 HIS A 160 ? HIS A 1805 . ? 1_555 ? # _database_PDB_matrix.entry_id 3PXB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PXB _atom_sites.fract_transf_matrix[1][1] 0.008743 _atom_sites.fract_transf_matrix[1][2] 0.005048 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010095 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008175 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1646 ? ? ? A . n A 1 2 ASN 2 1647 ? ? ? A . n A 1 3 LYS 3 1648 ? ? ? A . n A 1 4 ARG 4 1649 1649 ARG ARG A . n A 1 5 MET 5 1650 1650 MET MET A . n A 1 6 SER 6 1651 1651 SER SER A . n A 1 7 MET 7 1652 1652 MET MET A . n A 1 8 VAL 8 1653 1653 VAL VAL A . n A 1 9 VAL 9 1654 1654 VAL VAL A . n A 1 10 SER 10 1655 1655 SER SER A . n A 1 11 GLY 11 1656 1656 GLY GLY A . n A 1 12 LEU 12 1657 1657 LEU LEU A . n A 1 13 THR 13 1658 1658 THR THR A . n A 1 14 PRO 14 1659 1659 PRO PRO A . n A 1 15 GLU 15 1660 1660 GLU GLU A . n A 1 16 GLU 16 1661 1661 GLU GLU A . n A 1 17 PHE 17 1662 1662 PHE PHE A . n A 1 18 MET 18 1663 1663 MET MET A . n A 1 19 LEU 19 1664 1664 LEU LEU A . n A 1 20 VAL 20 1665 1665 VAL VAL A . n A 1 21 TYR 21 1666 1666 TYR TYR A . n A 1 22 LYS 22 1667 1667 LYS LYS A . n A 1 23 PHE 23 1668 1668 PHE PHE A . n A 1 24 ALA 24 1669 1669 ALA ALA A . n A 1 25 ARG 25 1670 1670 ARG ARG A . n A 1 26 LYS 26 1671 1671 LYS LYS A . n A 1 27 HIS 27 1672 1672 HIS HIS A . n A 1 28 HIS 28 1673 1673 HIS HIS A . n A 1 29 ILE 29 1674 1674 ILE ILE A . n A 1 30 THR 30 1675 1675 THR THR A . n A 1 31 LEU 31 1676 1676 LEU LEU A . n A 1 32 THR 32 1677 1677 THR THR A . n A 1 33 ASN 33 1678 1678 ASN ASN A . n A 1 34 LEU 34 1679 1679 LEU LEU A . n A 1 35 ILE 35 1680 1680 ILE ILE A . n A 1 36 THR 36 1681 1681 THR THR A . n A 1 37 GLU 37 1682 1682 GLU GLU A . n A 1 38 GLU 38 1683 1683 GLU GLU A . n A 1 39 THR 39 1684 1684 THR THR A . n A 1 40 THR 40 1685 1685 THR THR A . n A 1 41 HIS 41 1686 1686 HIS HIS A . n A 1 42 VAL 42 1687 1687 VAL VAL A . n A 1 43 VAL 43 1688 1688 VAL VAL A . n A 1 44 MET 44 1689 1689 MET MET A . n A 1 45 LYS 45 1690 1690 LYS LYS A . n A 1 46 THR 46 1691 1691 THR THR A . n A 1 47 ASP 47 1692 1692 ASP ASP A . n A 1 48 ALA 48 1693 1693 ALA ALA A . n A 1 49 GLU 49 1694 1694 GLU GLU A . n A 1 50 PHE 50 1695 1695 PHE PHE A . n A 1 51 VAL 51 1696 1696 VAL VAL A . n A 1 52 CYS 52 1697 1697 CYS CYS A . n A 1 53 GLU 53 1698 1698 GLU GLU A . n A 1 54 ARG 54 1699 1699 ARG ARG A . n A 1 55 ALA 55 1700 1700 ALA ALA A . n A 1 56 LEU 56 1701 1701 LEU LEU A . n A 1 57 LYS 57 1702 1702 LYS LYS A . n A 1 58 TYR 58 1703 1703 TYR TYR A . n A 1 59 PHE 59 1704 1704 PHE PHE A . n A 1 60 LEU 60 1705 1705 LEU LEU A . n A 1 61 GLY 61 1706 1706 GLY GLY A . n A 1 62 ILE 62 1707 1707 ILE ILE A . n A 1 63 ALA 63 1708 1708 ALA ALA A . n A 1 64 GLY 64 1709 1709 GLY GLY A . n A 1 65 GLY 65 1710 1710 GLY GLY A . n A 1 66 LYS 66 1711 1711 LYS LYS A . n A 1 67 TRP 67 1712 1712 TRP TRP A . n A 1 68 VAL 68 1713 1713 VAL VAL A . n A 1 69 VAL 69 1714 1714 VAL VAL A . n A 1 70 SER 70 1715 1715 SER SER A . n A 1 71 TYR 71 1716 1716 TYR TYR A . n A 1 72 PHE 72 1717 1717 PHE PHE A . n A 1 73 TRP 73 1718 1718 TRP TRP A . n A 1 74 VAL 74 1719 1719 VAL VAL A . n A 1 75 THR 75 1720 1720 THR THR A . n A 1 76 GLN 76 1721 1721 GLN GLN A . n A 1 77 SER 77 1722 1722 SER SER A . n A 1 78 ILE 78 1723 1723 ILE ILE A . n A 1 79 LYS 79 1724 1724 LYS LYS A . n A 1 80 GLU 80 1725 1725 GLU GLU A . n A 1 81 ARG 81 1726 1726 ARG ARG A . n A 1 82 LYS 82 1727 1727 LYS LYS A . n A 1 83 MET 83 1728 1728 MET MET A . n A 1 84 LEU 84 1729 1729 LEU LEU A . n A 1 85 ASN 85 1730 1730 ASN ASN A . n A 1 86 GLU 86 1731 1731 GLU GLU A . n A 1 87 HIS 87 1732 1732 HIS HIS A . n A 1 88 ASP 88 1733 1733 ASP ASP A . n A 1 89 PHE 89 1734 1734 PHE PHE A . n A 1 90 GLU 90 1735 1735 GLU GLU A . n A 1 91 VAL 91 1736 1736 VAL VAL A . n A 1 92 ARG 92 1737 1737 ARG ARG A . n A 1 93 GLY 93 1738 1738 GLY GLY A . n A 1 94 ASP 94 1739 1739 ASP ASP A . n A 1 95 VAL 95 1740 1740 VAL VAL A . n A 1 96 VAL 96 1741 1741 VAL VAL A . n A 1 97 ASN 97 1742 1742 ASN ASN A . n A 1 98 GLY 98 1743 1743 GLY GLY A . n A 1 99 ARG 99 1744 1744 ARG ARG A . n A 1 100 ASN 100 1745 1745 ASN ASN A . n A 1 101 HIS 101 1746 1746 HIS HIS A . n A 1 102 GLN 102 1747 1747 GLN GLN A . n A 1 103 GLY 103 1748 1748 GLY GLY A . n A 1 104 PRO 104 1749 1749 PRO PRO A . n A 1 105 LYS 105 1750 1750 LYS LYS A . n A 1 106 ARG 106 1751 1751 ARG ARG A . n A 1 107 ALA 107 1752 1752 ALA ALA A . n A 1 108 ARG 108 1753 1753 ARG ARG A . n A 1 109 GLU 109 1754 1754 GLU GLU A . n A 1 110 SER 110 1755 1755 SER SER A . n A 1 111 GLN 111 1756 1756 GLN GLN A . n A 1 112 ASP 112 1757 1757 ASP ASP A . n A 1 113 ARG 113 1758 1758 ARG ARG A . n A 1 114 LYS 114 1759 1759 LYS LYS A . n A 1 115 ILE 115 1760 1760 ILE ILE A . n A 1 116 PHE 116 1761 1761 PHE PHE A . n A 1 117 ARG 117 1762 1762 ARG ARG A . n A 1 118 GLY 118 1763 1763 GLY GLY A . n A 1 119 LEU 119 1764 1764 LEU LEU A . n A 1 120 GLU 120 1765 1765 GLU GLU A . n A 1 121 ILE 121 1766 1766 ILE ILE A . n A 1 122 CYS 122 1767 1767 CYS CYS A . n A 1 123 CYS 123 1768 1768 CYS CYS A . n A 1 124 TYR 124 1769 1769 TYR TYR A . n A 1 125 GLY 125 1770 1770 GLY GLY A . n A 1 126 PRO 126 1771 1771 PRO PRO A . n A 1 127 PHE 127 1772 1772 PHE PHE A . n A 1 128 THR 128 1773 1773 THR THR A . n A 1 129 ASN 129 1774 1774 ASN ASN A . n A 1 130 MET 130 1775 1775 MET MET A . n A 1 131 PRO 131 1776 1776 PRO PRO A . n A 1 132 THR 132 1777 1777 THR THR A . n A 1 133 ASP 133 1778 1778 ASP ASP A . n A 1 134 GLN 134 1779 1779 GLN GLN A . n A 1 135 LEU 135 1780 1780 LEU LEU A . n A 1 136 GLU 136 1781 1781 GLU GLU A . n A 1 137 TRP 137 1782 1782 TRP TRP A . n A 1 138 MET 138 1783 1783 MET MET A . n A 1 139 VAL 139 1784 1784 VAL VAL A . n A 1 140 GLN 140 1785 1785 GLN GLN A . n A 1 141 LEU 141 1786 1786 LEU LEU A . n A 1 142 CYS 142 1787 1787 CYS CYS A . n A 1 143 GLY 143 1788 1788 GLY GLY A . n A 1 144 ALA 144 1789 1789 ALA ALA A . n A 1 145 SER 145 1790 1790 SER SER A . n A 1 146 VAL 146 1791 1791 VAL VAL A . n A 1 147 VAL 147 1792 1792 VAL VAL A . n A 1 148 LYS 148 1793 1793 LYS LYS A . n A 1 149 GLU 149 1794 1794 GLU GLU A . n A 1 150 LEU 150 1795 1795 LEU LEU A . n A 1 151 SER 151 1796 1796 SER SER A . n A 1 152 SER 152 1797 1797 SER SER A . n A 1 153 PHE 153 1798 1798 PHE PHE A . n A 1 154 THR 154 1799 1799 THR THR A . n A 1 155 LEU 155 1800 1800 LEU LEU A . n A 1 156 GLY 156 1801 1801 GLY GLY A . n A 1 157 THR 157 1802 1802 THR THR A . n A 1 158 GLY 158 1803 1803 GLY GLY A . n A 1 159 VAL 159 1804 1804 VAL VAL A . n A 1 160 HIS 160 1805 1805 HIS HIS A . n A 1 161 PRO 161 1806 1806 PRO PRO A . n A 1 162 ILE 162 1807 1807 ILE ILE A . n A 1 163 VAL 163 1808 1808 VAL VAL A . n A 1 164 VAL 164 1809 1809 VAL VAL A . n A 1 165 VAL 165 1810 1810 VAL VAL A . n A 1 166 GLN 166 1811 1811 GLN GLN A . n A 1 167 PRO 167 1812 1812 PRO PRO A . n A 1 168 ASP 168 1813 1813 ASP ASP A . n A 1 169 ALA 169 1814 1814 ALA ALA A . n A 1 170 TRP 170 1815 1815 TRP TRP A . n A 1 171 THR 171 1816 1816 THR THR A . n A 1 172 GLU 172 1817 ? ? ? A . n A 1 173 ASP 173 1818 ? ? ? A . n A 1 174 ASN 174 1819 ? ? ? A . n A 1 175 GLY 175 1820 1820 GLY GLY A . n A 1 176 PHE 176 1821 1821 PHE PHE A . n A 1 177 HIS 177 1822 1822 HIS HIS A . n A 1 178 ALA 178 1823 1823 ALA ALA A . n A 1 179 ILE 179 1824 1824 ILE ILE A . n A 1 180 GLY 180 1825 1825 GLY GLY A . n A 1 181 GLN 181 1826 1826 GLN GLN A . n A 1 182 MET 182 1827 1827 MET MET A . n A 1 183 CYS 183 1828 1828 CYS CYS A . n A 1 184 GLU 184 1829 1829 GLU GLU A . n A 1 185 ALA 185 1830 1830 ALA ALA A . n A 1 186 PRO 186 1831 1831 PRO PRO A . n A 1 187 VAL 187 1832 1832 VAL VAL A . n A 1 188 VAL 188 1833 1833 VAL VAL A . n A 1 189 THR 189 1834 1834 THR THR A . n A 1 190 ARG 190 1835 1835 ARG ARG A . n A 1 191 GLU 191 1836 1836 GLU GLU A . n A 1 192 TRP 192 1837 1837 TRP TRP A . n A 1 193 VAL 193 1838 1838 VAL VAL A . n A 1 194 LEU 194 1839 1839 LEU LEU A . n A 1 195 ASP 195 1840 1840 ASP ASP A . n A 1 196 SER 196 1841 1841 SER SER A . n A 1 197 VAL 197 1842 1842 VAL VAL A . n A 1 198 ALA 198 1843 1843 ALA ALA A . n A 1 199 LEU 199 1844 1844 LEU LEU A . n A 1 200 TYR 200 1845 1845 TYR TYR A . n A 1 201 GLN 201 1846 1846 GLN GLN A . n A 1 202 CYS 202 1847 1847 CYS CYS A . n A 1 203 GLN 203 1848 1848 GLN GLN A . n A 1 204 GLU 204 1849 1849 GLU GLU A . n A 1 205 LEU 205 1850 1850 LEU LEU A . n A 1 206 ASP 206 1851 1851 ASP ASP A . n A 1 207 THR 207 1852 1852 THR THR A . n A 1 208 TYR 208 1853 1853 TYR TYR A . n A 1 209 LEU 209 1854 1854 LEU LEU A . n A 1 210 ILE 210 1855 1855 ILE ILE A . n A 1 211 PRO 211 1856 1856 PRO PRO A . n A 1 212 GLN 212 1857 1857 GLN GLN A . n A 1 213 ILE 213 1858 1858 ILE ILE A . n A 1 214 PRO 214 1859 1859 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 20 20 SO4 SO4 A . C 3 NI 1 21 21 NI NI A . D 4 HOH 1 1 1 HOH HOH A . D 4 HOH 2 2 2 HOH HOH A . D 4 HOH 3 3 3 HOH HOH A . D 4 HOH 4 4 4 HOH HOH A . D 4 HOH 5 5 5 HOH HOH A . D 4 HOH 6 6 6 HOH HOH A . D 4 HOH 7 7 7 HOH HOH A . D 4 HOH 8 8 8 HOH HOH A . D 4 HOH 9 9 9 HOH HOH A . D 4 HOH 10 10 10 HOH HOH A . D 4 HOH 11 11 11 HOH HOH A . D 4 HOH 12 12 12 HOH HOH A . D 4 HOH 13 13 13 HOH HOH A . D 4 HOH 14 14 14 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -33.1378 40.2011 3.9210 0.3991 0.8117 0.6002 -0.1663 0.0980 -0.0121 4.8316 2.4288 3.4194 0.1539 1.0583 -1.8803 -0.2254 0.0840 -1.0113 -0.2504 -0.0146 -0.2756 0.4557 -0.8316 0.0007 'X-RAY DIFFRACTION' 2 ? refined -31.6388 45.3404 -6.6052 0.3925 1.5598 0.4543 -0.3104 0.0905 -0.1270 9.1329 2.0633 -0.7249 3.5458 1.0215 -1.5256 -0.9736 2.7715 -0.4202 -0.7245 0.8123 0.2221 0.1235 -0.4739 0.0004 'X-RAY DIFFRACTION' 3 ? refined -23.9091 48.5960 -14.3175 0.4869 3.4070 0.5494 -0.7131 0.1319 -0.1214 0.9599 0.6476 0.7315 0.6197 -1.1216 -0.5292 -1.0684 5.9525 -0.0937 -1.1847 1.0705 0.0402 1.1013 -2.7226 -0.0139 'X-RAY DIFFRACTION' 4 ? refined -6.5671 47.9266 -2.0981 0.2350 0.5559 0.5433 -0.0367 0.0901 -0.0375 9.5316 5.6017 7.5286 2.2490 -3.0054 -0.5838 -0.4840 0.5633 -0.9082 0.0853 -0.0859 -0.6117 0.6242 -0.1835 -0.0006 'X-RAY DIFFRACTION' 5 ? refined -5.1005 58.5629 -5.9145 0.2040 0.7923 0.6336 -0.0116 0.0468 0.2974 9.2322 5.3844 7.9159 -0.9803 -2.4022 -2.7333 -0.1113 2.2325 2.1051 0.4007 0.0972 -0.2690 -0.3294 -0.3735 0.0003 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A and resid 1649:1684' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain A and resid 1685:1741' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'chain A and resid 1742:1753' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'chain A and resid 1754:1803' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'chain A and resid 1804:1859' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxDC 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.3_473)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 1684 ? ? -38.75 124.98 2 1 SER A 1755 ? ? -81.27 38.25 3 1 MET A 1775 ? ? -168.19 115.59 4 1 THR A 1799 ? ? -69.25 91.66 5 1 THR A 1802 ? ? -128.89 -168.12 6 1 GLU A 1829 ? ? -116.49 63.69 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 1649 ? CG ? A ARG 4 CG 2 1 Y 1 A ARG 1649 ? CD ? A ARG 4 CD 3 1 Y 1 A ARG 1649 ? NE ? A ARG 4 NE 4 1 Y 1 A ARG 1649 ? CZ ? A ARG 4 CZ 5 1 Y 1 A ARG 1649 ? NH1 ? A ARG 4 NH1 6 1 Y 1 A ARG 1649 ? NH2 ? A ARG 4 NH2 7 1 Y 1 A ARG 1670 ? CG ? A ARG 25 CG 8 1 Y 1 A ARG 1670 ? CD ? A ARG 25 CD 9 1 Y 1 A ARG 1670 ? NE ? A ARG 25 NE 10 1 Y 1 A ARG 1670 ? CZ ? A ARG 25 CZ 11 1 Y 1 A ARG 1670 ? NH1 ? A ARG 25 NH1 12 1 Y 1 A ARG 1670 ? NH2 ? A ARG 25 NH2 13 1 Y 1 A LYS 1727 ? CG ? A LYS 82 CG 14 1 Y 1 A LYS 1727 ? CD ? A LYS 82 CD 15 1 Y 1 A LYS 1727 ? CE ? A LYS 82 CE 16 1 Y 1 A LYS 1727 ? NZ ? A LYS 82 NZ 17 1 Y 1 A ASP 1733 ? CG ? A ASP 88 CG 18 1 Y 1 A ASP 1733 ? OD1 ? A ASP 88 OD1 19 1 Y 1 A ASP 1733 ? OD2 ? A ASP 88 OD2 20 1 Y 1 A ARG 1737 ? CG ? A ARG 92 CG 21 1 Y 1 A ARG 1737 ? CD ? A ARG 92 CD 22 1 Y 1 A ARG 1737 ? NE ? A ARG 92 NE 23 1 Y 1 A ARG 1737 ? CZ ? A ARG 92 CZ 24 1 Y 1 A ARG 1737 ? NH1 ? A ARG 92 NH1 25 1 Y 1 A ARG 1737 ? NH2 ? A ARG 92 NH2 26 1 Y 1 A ARG 1758 ? CG ? A ARG 113 CG 27 1 Y 1 A ARG 1758 ? CD ? A ARG 113 CD 28 1 Y 1 A ARG 1758 ? NE ? A ARG 113 NE 29 1 Y 1 A ARG 1758 ? CZ ? A ARG 113 CZ 30 1 Y 1 A ARG 1758 ? NH1 ? A ARG 113 NH1 31 1 Y 1 A ARG 1758 ? NH2 ? A ARG 113 NH2 32 1 Y 1 A LEU 1800 ? CG ? A LEU 155 CG 33 1 Y 1 A LEU 1800 ? CD1 ? A LEU 155 CD1 34 1 Y 1 A LEU 1800 ? CD2 ? A LEU 155 CD2 35 1 Y 1 A TRP 1815 ? CG ? A TRP 170 CG 36 1 Y 1 A TRP 1815 ? CD1 ? A TRP 170 CD1 37 1 Y 1 A TRP 1815 ? CD2 ? A TRP 170 CD2 38 1 Y 1 A TRP 1815 ? NE1 ? A TRP 170 NE1 39 1 Y 1 A TRP 1815 ? CE2 ? A TRP 170 CE2 40 1 Y 1 A TRP 1815 ? CE3 ? A TRP 170 CE3 41 1 Y 1 A TRP 1815 ? CZ2 ? A TRP 170 CZ2 42 1 Y 1 A TRP 1815 ? CZ3 ? A TRP 170 CZ3 43 1 Y 1 A TRP 1815 ? CH2 ? A TRP 170 CH2 44 1 Y 1 A GLU 1849 ? CG ? A GLU 204 CG 45 1 Y 1 A GLU 1849 ? CD ? A GLU 204 CD 46 1 Y 1 A GLU 1849 ? OE1 ? A GLU 204 OE1 47 1 Y 1 A GLU 1849 ? OE2 ? A GLU 204 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 1646 ? A VAL 1 2 1 Y 1 A ASN 1647 ? A ASN 2 3 1 Y 1 A LYS 1648 ? A LYS 3 4 1 Y 1 A GLU 1817 ? A GLU 172 5 1 Y 1 A ASP 1818 ? A ASP 173 6 1 Y 1 A ASN 1819 ? A ASN 174 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'NICKEL (II) ION' NI 4 water HOH #