HEADER LYASE 14-DEC-10 3PZK TITLE CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS CROTONASE IN APO TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: E ENOYL-COA HYDRATASE ECHA8; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 4.2.1.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: ECHA8, MT1100, MTV017.23C, RV1070C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP16 KEYWDS STRUCTURAL GENOMICS, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, KEYWDS 2 CROTONASE, ENOYL COA HYDRATASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BRUNING,E.DELGADO,S.GHOSH,J.C.SACCHETTINI,TB STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (TBSGC) REVDAT 3 13-SEP-23 3PZK 1 REMARK REVDAT 2 08-NOV-17 3PZK 1 REMARK REVDAT 1 23-MAR-11 3PZK 0 JRNL AUTH J.B.BRUNING,E.DELGADO,S.GHOSH,J.C.SACCHETTINI JRNL TITL CRYSTAL STRUCTURE OF THE PROKARYOTIC CROTONASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 43097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9966 - 9.3517 0.65 394 0 0.1836 0.0000 REMARK 3 2 9.3517 - 7.5534 0.83 490 0 0.1379 0.0000 REMARK 3 3 7.5534 - 6.6385 0.88 510 0 0.1585 0.0000 REMARK 3 4 6.6385 - 6.0500 0.91 509 0 0.1799 0.0000 REMARK 3 5 6.0500 - 5.6267 0.91 531 0 0.1621 0.0000 REMARK 3 6 5.6267 - 5.3015 0.92 517 0 0.1698 0.0000 REMARK 3 7 5.3015 - 5.0405 0.93 528 0 0.1547 0.0000 REMARK 3 8 5.0405 - 4.8243 0.89 497 0 0.1353 0.0000 REMARK 3 9 4.8243 - 4.6410 0.90 517 0 0.1214 0.0000 REMARK 3 10 4.6410 - 4.4827 0.92 502 0 0.1451 0.0000 REMARK 3 11 4.4827 - 4.3440 0.90 514 0 0.1326 0.0000 REMARK 3 12 4.3440 - 4.2210 0.92 517 0 0.1273 0.0000 REMARK 3 13 4.2210 - 4.1108 0.93 510 0 0.1556 0.0000 REMARK 3 14 4.1108 - 4.0114 0.93 536 0 0.1496 0.0000 REMARK 3 15 4.0114 - 3.9209 0.91 492 0 0.1665 0.0000 REMARK 3 16 3.9209 - 3.8380 0.94 538 0 0.1593 0.0000 REMARK 3 17 3.8380 - 3.7618 0.91 510 0 0.1774 0.0000 REMARK 3 18 3.7618 - 3.6912 0.93 509 0 0.1770 0.0000 REMARK 3 19 3.6912 - 3.6257 0.88 495 0 0.1883 0.0000 REMARK 3 20 3.6257 - 3.5646 0.83 460 0 0.1869 0.0000 REMARK 3 21 3.5646 - 3.5074 0.93 510 0 0.1992 0.0000 REMARK 3 22 3.5074 - 3.4537 0.93 519 0 0.1963 0.0000 REMARK 3 23 3.4537 - 3.4032 0.94 527 0 0.1997 0.0000 REMARK 3 24 3.4032 - 3.3555 0.93 526 0 0.2019 0.0000 REMARK 3 25 3.3555 - 3.3103 0.94 521 0 0.2213 0.0000 REMARK 3 26 3.3103 - 3.2675 0.94 491 0 0.2159 0.0000 REMARK 3 27 3.2675 - 3.2268 0.91 528 0 0.2123 0.0000 REMARK 3 28 3.2268 - 3.1881 0.94 497 0 0.2114 0.0000 REMARK 3 29 3.1881 - 3.1512 0.95 531 0 0.2212 0.0000 REMARK 3 30 3.1512 - 3.1159 0.96 536 0 0.2132 0.0000 REMARK 3 31 3.1159 - 3.0822 0.93 510 0 0.2210 0.0000 REMARK 3 32 3.0822 - 3.0498 0.96 506 0 0.2324 0.0000 REMARK 3 33 3.0498 - 3.0188 0.93 536 0 0.2313 0.0000 REMARK 3 34 3.0188 - 2.9890 0.94 531 0 0.2180 0.0000 REMARK 3 35 2.9890 - 2.9604 0.95 505 0 0.2110 0.0000 REMARK 3 36 2.9604 - 2.9328 0.96 527 0 0.2185 0.0000 REMARK 3 37 2.9328 - 2.9062 0.95 528 0 0.2179 0.0000 REMARK 3 38 2.9062 - 2.8806 0.94 517 0 0.2290 0.0000 REMARK 3 39 2.8806 - 2.8558 0.95 527 0 0.2194 0.0000 REMARK 3 40 2.8558 - 2.8319 0.95 542 0 0.2328 0.0000 REMARK 3 41 2.8319 - 2.8087 0.96 508 0 0.2376 0.0000 REMARK 3 42 2.8087 - 2.7863 0.94 521 0 0.2198 0.0000 REMARK 3 43 2.7863 - 2.7646 0.94 526 0 0.2186 0.0000 REMARK 3 44 2.7646 - 2.7436 0.95 510 0 0.2147 0.0000 REMARK 3 45 2.7436 - 2.7232 0.95 526 0 0.2241 0.0000 REMARK 3 46 2.7232 - 2.7033 0.94 500 0 0.2200 0.0000 REMARK 3 47 2.7033 - 2.6841 0.96 542 0 0.2192 0.0000 REMARK 3 48 2.6841 - 2.6653 0.95 552 0 0.2377 0.0000 REMARK 3 49 2.6653 - 2.6471 0.94 479 0 0.2226 0.0000 REMARK 3 50 2.6471 - 2.6294 0.94 538 0 0.1991 0.0000 REMARK 3 51 2.6294 - 2.6121 0.95 517 0 0.2275 0.0000 REMARK 3 52 2.6121 - 2.5953 0.95 507 0 0.2237 0.0000 REMARK 3 53 2.5953 - 2.5789 0.94 540 0 0.2054 0.0000 REMARK 3 54 2.5789 - 2.5629 0.95 504 0 0.2137 0.0000 REMARK 3 55 2.5629 - 2.5473 0.92 525 0 0.2086 0.0000 REMARK 3 56 2.5473 - 2.5321 0.94 510 0 0.1903 0.0000 REMARK 3 57 2.5321 - 2.5173 0.95 517 0 0.2070 0.0000 REMARK 3 58 2.5173 - 2.5027 0.95 524 0 0.2003 0.0000 REMARK 3 59 2.5027 - 2.4885 0.95 502 0 0.2080 0.0000 REMARK 3 60 2.4885 - 2.4747 0.94 523 0 0.2244 0.0000 REMARK 3 61 2.4747 - 2.4611 0.93 519 0 0.2010 0.0000 REMARK 3 62 2.4611 - 2.4478 0.94 521 0 0.2244 0.0000 REMARK 3 63 2.4478 - 2.4348 0.94 505 0 0.1959 0.0000 REMARK 3 64 2.4348 - 2.4221 0.94 497 0 0.2201 0.0000 REMARK 3 65 2.4221 - 2.4096 0.96 541 0 0.2139 0.0000 REMARK 3 66 2.4096 - 2.3974 0.94 517 0 0.2112 0.0000 REMARK 3 67 2.3974 - 2.3855 0.95 534 0 0.2294 0.0000 REMARK 3 68 2.3855 - 2.3737 0.94 501 0 0.2314 0.0000 REMARK 3 69 2.3737 - 2.3622 0.92 510 0 0.2417 0.0000 REMARK 3 70 2.3622 - 2.3509 0.94 497 0 0.2759 0.0000 REMARK 3 71 2.3509 - 2.3399 0.93 539 0 0.2480 0.0000 REMARK 3 72 2.3399 - 2.3290 0.92 496 0 0.2891 0.0000 REMARK 3 73 2.3290 - 2.3183 0.91 475 0 0.3013 0.0000 REMARK 3 74 2.3183 - 2.3079 0.85 476 0 0.3148 0.0000 REMARK 3 75 2.3079 - 2.2976 0.67 369 0 0.3718 0.0000 REMARK 3 76 2.2976 - 2.2875 0.15 59 0 0.3687 0.0000 REMARK 3 77 2.2875 - 2.2775 0.14 36 0 0.4613 0.0000 REMARK 3 78 2.2775 - 2.2678 0.82 436 0 0.3748 0.0000 REMARK 3 79 2.2678 - 2.2582 0.96 520 0 0.3608 0.0000 REMARK 3 80 2.2582 - 2.2487 0.94 522 0 0.3997 0.0000 REMARK 3 81 2.2487 - 2.2395 0.95 519 0 0.3895 0.0000 REMARK 3 82 2.2395 - 2.2303 0.94 496 0 0.3535 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 55.34 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.07300 REMARK 3 B22 (A**2) : -14.26100 REMARK 3 B33 (A**2) : -7.81200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 NULL REMARK 3 ANGLE : 0.649 NULL REMARK 3 CHIRALITY : 0.053 NULL REMARK 3 PLANARITY : 0.003 NULL REMARK 3 DIHEDRAL : 9.786 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -4.4646 -31.6302 -9.7903 REMARK 3 T TENSOR REMARK 3 T11: 0.1972 T22: 0.2005 REMARK 3 T33: 0.1886 T12: -0.0152 REMARK 3 T13: 0.0085 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.4024 L22: 0.4139 REMARK 3 L33: 0.6798 L12: -0.0845 REMARK 3 L13: 0.1298 L23: 0.0346 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: -0.0861 S13: 0.0719 REMARK 3 S21: 0.1471 S22: -0.0274 S23: 0.0116 REMARK 3 S31: 0.1286 S32: -0.0966 S33: 0.0206 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000063006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.05100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.25800 REMARK 200 R SYM FOR SHELL (I) : 0.25800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 10.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1MJ3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2 M LICL, AND 20% REMARK 280 GLYCEROL, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.72500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.72500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 66.89800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.86700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 66.89800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.86700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.72500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 66.89800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.86700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.72500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 66.89800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.86700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -282.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -51.72500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 307 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 435 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 436 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 69 REMARK 465 MET A 70 REMARK 465 ALA A 71 REMARK 465 ASP A 72 REMARK 465 LEU A 73 REMARK 465 THR A 74 REMARK 465 PHE A 75 REMARK 465 ALA A 76 REMARK 465 ASP A 77 REMARK 465 ALA A 78 REMARK 465 HIS A 256 REMARK 465 ARG A 257 REMARK 465 MET B 1 REMARK 465 THR B 255 REMARK 465 HIS B 256 REMARK 465 ARG B 257 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 THR C 255 REMARK 465 HIS C 256 REMARK 465 ARG C 257 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 2 OG1 CG2 REMARK 470 GLN A 23 CG CD OE1 NE2 REMARK 470 ILE A 67 CG1 CG2 CD1 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 THR A 80 CG2 REMARK 470 ASP A 82 CG OD1 OD2 REMARK 470 PHE A 83 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 126 CD CE NZ REMARK 470 ASP A 183 CG OD1 OD2 REMARK 470 ASP A 184 CG OD1 OD2 REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 ILE A 247 CG1 CG2 CD1 REMARK 470 THR A 255 CG2 REMARK 470 THR B 2 OG1 CG2 REMARK 470 ASP B 11 CG OD1 OD2 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 ASP B 72 CG OD1 OD2 REMARK 470 LYS B 126 CD CE NZ REMARK 470 ASP B 183 CG OD1 OD2 REMARK 470 THR B 187 CG2 REMARK 470 HIS B 231 ND1 CD2 CE1 NE2 REMARK 470 GLU C 4 CG CD OE1 OE2 REMARK 470 THR C 5 CG2 REMARK 470 ASP C 11 CG OD1 OD2 REMARK 470 LYS C 126 CD CE NZ REMARK 470 GLU C 237 CG CD OE1 OE2 REMARK 470 PRO C 252 CG CD REMARK 470 GLN C 253 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 12 -116.24 51.78 REMARK 500 ALA A 60 114.51 -160.31 REMARK 500 ALA A 62 111.99 -168.21 REMARK 500 ILE A 67 -77.08 -38.37 REMARK 500 PHE A 84 -2.52 76.51 REMARK 500 VAL A 136 -167.89 -111.57 REMARK 500 LYS A 249 62.84 38.18 REMARK 500 GLN B 12 -101.67 71.59 REMARK 500 ASN B 20 76.23 -118.07 REMARK 500 ARG B 21 53.61 -146.87 REMARK 500 ALA B 62 114.34 -177.71 REMARK 500 PHE B 84 -11.84 86.75 REMARK 500 ASP B 123 -45.12 -26.27 REMARK 500 VAL B 136 -156.76 -123.16 REMARK 500 ALA B 235 21.70 -76.38 REMARK 500 GLN C 12 -108.59 68.97 REMARK 500 ALA C 62 120.39 -171.50 REMARK 500 PHE C 84 -17.75 84.49 REMARK 500 VAL C 136 -152.97 -128.98 REMARK 500 LYS C 249 32.85 33.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 258 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV1070C RELATED DB: TARGETDB DBREF 3PZK A 1 257 UNP P64016 ECHA8_MYCTU 1 257 DBREF 3PZK B 1 257 UNP P64016 ECHA8_MYCTU 1 257 DBREF 3PZK C 1 257 UNP P64016 ECHA8_MYCTU 1 257 SEQRES 1 A 257 MET THR TYR GLU THR ILE LEU VAL GLU ARG ASP GLN ARG SEQRES 2 A 257 VAL GLY ILE ILE THR LEU ASN ARG PRO GLN ALA LEU ASN SEQRES 3 A 257 ALA LEU ASN SER GLN VAL MET ASN GLU VAL THR SER ALA SEQRES 4 A 257 ALA THR GLU LEU ASP ASP ASP PRO ASP ILE GLY ALA ILE SEQRES 5 A 257 ILE ILE THR GLY SER ALA LYS ALA PHE ALA ALA GLY ALA SEQRES 6 A 257 ASP ILE LYS GLU MET ALA ASP LEU THR PHE ALA ASP ALA SEQRES 7 A 257 PHE THR ALA ASP PHE PHE ALA THR TRP GLY LYS LEU ALA SEQRES 8 A 257 ALA VAL ARG THR PRO THR ILE ALA ALA VAL ALA GLY TYR SEQRES 9 A 257 ALA LEU GLY GLY GLY CYS GLU LEU ALA MET MET CYS ASP SEQRES 10 A 257 VAL LEU ILE ALA ALA ASP THR ALA LYS PHE GLY GLN PRO SEQRES 11 A 257 GLU ILE LYS LEU GLY VAL LEU PRO GLY MET GLY GLY SER SEQRES 12 A 257 GLN ARG LEU THR ARG ALA ILE GLY LYS ALA LYS ALA MET SEQRES 13 A 257 ASP LEU ILE LEU THR GLY ARG THR MET ASP ALA ALA GLU SEQRES 14 A 257 ALA GLU ARG SER GLY LEU VAL SER ARG VAL VAL PRO ALA SEQRES 15 A 257 ASP ASP LEU LEU THR GLU ALA ARG ALA THR ALA THR THR SEQRES 16 A 257 ILE SER GLN MET SER ALA SER ALA ALA ARG MET ALA LYS SEQRES 17 A 257 GLU ALA VAL ASN ARG ALA PHE GLU SER SER LEU SER GLU SEQRES 18 A 257 GLY LEU LEU TYR GLU ARG ARG LEU PHE HIS SER ALA PHE SEQRES 19 A 257 ALA THR GLU ASP GLN SER GLU GLY MET ALA ALA PHE ILE SEQRES 20 A 257 GLU LYS ARG ALA PRO GLN PHE THR HIS ARG SEQRES 1 B 257 MET THR TYR GLU THR ILE LEU VAL GLU ARG ASP GLN ARG SEQRES 2 B 257 VAL GLY ILE ILE THR LEU ASN ARG PRO GLN ALA LEU ASN SEQRES 3 B 257 ALA LEU ASN SER GLN VAL MET ASN GLU VAL THR SER ALA SEQRES 4 B 257 ALA THR GLU LEU ASP ASP ASP PRO ASP ILE GLY ALA ILE SEQRES 5 B 257 ILE ILE THR GLY SER ALA LYS ALA PHE ALA ALA GLY ALA SEQRES 6 B 257 ASP ILE LYS GLU MET ALA ASP LEU THR PHE ALA ASP ALA SEQRES 7 B 257 PHE THR ALA ASP PHE PHE ALA THR TRP GLY LYS LEU ALA SEQRES 8 B 257 ALA VAL ARG THR PRO THR ILE ALA ALA VAL ALA GLY TYR SEQRES 9 B 257 ALA LEU GLY GLY GLY CYS GLU LEU ALA MET MET CYS ASP SEQRES 10 B 257 VAL LEU ILE ALA ALA ASP THR ALA LYS PHE GLY GLN PRO SEQRES 11 B 257 GLU ILE LYS LEU GLY VAL LEU PRO GLY MET GLY GLY SER SEQRES 12 B 257 GLN ARG LEU THR ARG ALA ILE GLY LYS ALA LYS ALA MET SEQRES 13 B 257 ASP LEU ILE LEU THR GLY ARG THR MET ASP ALA ALA GLU SEQRES 14 B 257 ALA GLU ARG SER GLY LEU VAL SER ARG VAL VAL PRO ALA SEQRES 15 B 257 ASP ASP LEU LEU THR GLU ALA ARG ALA THR ALA THR THR SEQRES 16 B 257 ILE SER GLN MET SER ALA SER ALA ALA ARG MET ALA LYS SEQRES 17 B 257 GLU ALA VAL ASN ARG ALA PHE GLU SER SER LEU SER GLU SEQRES 18 B 257 GLY LEU LEU TYR GLU ARG ARG LEU PHE HIS SER ALA PHE SEQRES 19 B 257 ALA THR GLU ASP GLN SER GLU GLY MET ALA ALA PHE ILE SEQRES 20 B 257 GLU LYS ARG ALA PRO GLN PHE THR HIS ARG SEQRES 1 C 257 MET THR TYR GLU THR ILE LEU VAL GLU ARG ASP GLN ARG SEQRES 2 C 257 VAL GLY ILE ILE THR LEU ASN ARG PRO GLN ALA LEU ASN SEQRES 3 C 257 ALA LEU ASN SER GLN VAL MET ASN GLU VAL THR SER ALA SEQRES 4 C 257 ALA THR GLU LEU ASP ASP ASP PRO ASP ILE GLY ALA ILE SEQRES 5 C 257 ILE ILE THR GLY SER ALA LYS ALA PHE ALA ALA GLY ALA SEQRES 6 C 257 ASP ILE LYS GLU MET ALA ASP LEU THR PHE ALA ASP ALA SEQRES 7 C 257 PHE THR ALA ASP PHE PHE ALA THR TRP GLY LYS LEU ALA SEQRES 8 C 257 ALA VAL ARG THR PRO THR ILE ALA ALA VAL ALA GLY TYR SEQRES 9 C 257 ALA LEU GLY GLY GLY CYS GLU LEU ALA MET MET CYS ASP SEQRES 10 C 257 VAL LEU ILE ALA ALA ASP THR ALA LYS PHE GLY GLN PRO SEQRES 11 C 257 GLU ILE LYS LEU GLY VAL LEU PRO GLY MET GLY GLY SER SEQRES 12 C 257 GLN ARG LEU THR ARG ALA ILE GLY LYS ALA LYS ALA MET SEQRES 13 C 257 ASP LEU ILE LEU THR GLY ARG THR MET ASP ALA ALA GLU SEQRES 14 C 257 ALA GLU ARG SER GLY LEU VAL SER ARG VAL VAL PRO ALA SEQRES 15 C 257 ASP ASP LEU LEU THR GLU ALA ARG ALA THR ALA THR THR SEQRES 16 C 257 ILE SER GLN MET SER ALA SER ALA ALA ARG MET ALA LYS SEQRES 17 C 257 GLU ALA VAL ASN ARG ALA PHE GLU SER SER LEU SER GLU SEQRES 18 C 257 GLY LEU LEU TYR GLU ARG ARG LEU PHE HIS SER ALA PHE SEQRES 19 C 257 ALA THR GLU ASP GLN SER GLU GLY MET ALA ALA PHE ILE SEQRES 20 C 257 GLU LYS ARG ALA PRO GLN PHE THR HIS ARG HET SO4 A 258 5 HET SO4 B 258 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *242(H2 O) HELIX 1 1 ASN A 29 ASP A 46 1 18 HELIX 2 2 PHE A 84 THR A 86 5 3 HELIX 3 3 TRP A 87 ALA A 92 1 6 HELIX 4 4 GLY A 107 CYS A 116 1 10 HELIX 5 5 PRO A 130 GLY A 135 5 6 HELIX 6 6 GLY A 141 GLY A 151 1 11 HELIX 7 7 GLY A 151 GLY A 162 1 12 HELIX 8 8 ALA A 167 GLY A 174 1 8 HELIX 9 9 ASP A 184 GLN A 198 1 15 HELIX 10 10 SER A 200 ARG A 213 1 14 HELIX 11 11 ALA A 214 GLU A 216 5 3 HELIX 12 12 SER A 218 PHE A 234 1 17 HELIX 13 13 THR A 236 GLU A 248 1 13 HELIX 14 14 ARG B 21 LEU B 25 5 5 HELIX 15 15 ASN B 29 ASP B 46 1 18 HELIX 16 16 ILE B 67 ASP B 72 1 6 HELIX 17 17 THR B 74 ASP B 82 1 9 HELIX 18 18 PHE B 84 THR B 86 5 3 HELIX 19 19 TRP B 87 ALA B 92 1 6 HELIX 20 20 GLY B 107 CYS B 116 1 10 HELIX 21 21 GLN B 129 GLY B 135 5 7 HELIX 22 22 GLY B 141 GLY B 151 1 11 HELIX 23 23 GLY B 151 GLY B 162 1 12 HELIX 24 24 ALA B 167 SER B 173 1 7 HELIX 25 25 ASP B 184 GLN B 198 1 15 HELIX 26 26 SER B 200 ALA B 214 1 15 HELIX 27 27 SER B 218 ALA B 233 1 16 HELIX 28 28 PHE B 234 THR B 236 5 3 HELIX 29 29 GLU B 237 GLU B 248 1 12 HELIX 30 30 ARG C 21 LEU C 25 5 5 HELIX 31 31 ASN C 29 ASP C 45 1 17 HELIX 32 32 ASP C 66 ASP C 72 1 7 HELIX 33 33 THR C 74 ASP C 82 1 9 HELIX 34 34 PHE C 84 THR C 86 5 3 HELIX 35 35 TRP C 87 ALA C 92 1 6 HELIX 36 36 GLY C 107 CYS C 116 1 10 HELIX 37 37 GLN C 129 GLY C 135 5 7 HELIX 38 38 GLY C 141 GLY C 151 1 11 HELIX 39 39 GLY C 151 GLY C 162 1 12 HELIX 40 40 ALA C 167 GLY C 174 1 8 HELIX 41 41 ASP C 184 GLN C 198 1 15 HELIX 42 42 SER C 200 ALA C 214 1 15 HELIX 43 43 SER C 218 PHE C 234 1 17 HELIX 44 44 THR C 236 GLU C 248 1 13 SHEET 1 A 6 ILE A 6 ASP A 11 0 SHEET 2 A 6 VAL A 14 LEU A 19 -1 O THR A 18 N LEU A 7 SHEET 3 A 6 ALA A 51 THR A 55 1 O ILE A 53 N ILE A 17 SHEET 4 A 6 THR A 97 VAL A 101 1 O ILE A 98 N ILE A 54 SHEET 5 A 6 VAL A 118 ALA A 122 1 O VAL A 118 N ALA A 99 SHEET 6 A 6 ARG A 178 VAL A 180 1 O VAL A 180 N ALA A 121 SHEET 1 B 4 ALA A 60 ALA A 62 0 SHEET 2 B 4 TYR A 104 LEU A 106 1 O TYR A 104 N ALA A 62 SHEET 3 B 4 LYS A 126 GLY A 128 1 O LYS A 126 N ALA A 105 SHEET 4 B 4 THR A 164 ASP A 166 -1 O MET A 165 N PHE A 127 SHEET 1 C 6 ILE B 6 ASP B 11 0 SHEET 2 C 6 VAL B 14 LEU B 19 -1 O VAL B 14 N ASP B 11 SHEET 3 C 6 ALA B 51 THR B 55 1 O ILE B 53 N ILE B 17 SHEET 4 C 6 THR B 97 VAL B 101 1 O ILE B 98 N ILE B 52 SHEET 5 C 6 VAL B 118 ALA B 122 1 O ALA B 122 N VAL B 101 SHEET 6 C 6 ARG B 178 VAL B 180 1 O ARG B 178 N ALA B 121 SHEET 1 D 4 ALA B 60 ALA B 63 0 SHEET 2 D 4 TYR B 104 LEU B 106 1 O TYR B 104 N ALA B 62 SHEET 3 D 4 LYS B 126 GLY B 128 1 O LYS B 126 N ALA B 105 SHEET 4 D 4 MET B 165 ASP B 166 -1 O MET B 165 N PHE B 127 SHEET 1 E 6 ILE C 6 ASP C 11 0 SHEET 2 E 6 VAL C 14 LEU C 19 -1 O ILE C 16 N GLU C 9 SHEET 3 E 6 ALA C 51 THR C 55 1 O THR C 55 N LEU C 19 SHEET 4 E 6 THR C 97 VAL C 101 1 O ILE C 98 N ILE C 52 SHEET 5 E 6 VAL C 118 ALA C 122 1 O VAL C 118 N ALA C 99 SHEET 6 E 6 ARG C 178 VAL C 180 1 O ARG C 178 N ALA C 121 SHEET 1 F 4 ALA C 60 ALA C 62 0 SHEET 2 F 4 TYR C 104 LEU C 106 1 O TYR C 104 N ALA C 62 SHEET 3 F 4 LYS C 126 GLY C 128 1 O LYS C 126 N ALA C 105 SHEET 4 F 4 MET C 165 ASP C 166 -1 O MET C 165 N PHE C 127 SITE 1 AC1 11 ALA A 65 PHE A 84 GLY A 108 GLU A 111 SITE 2 AC1 11 GLU A 131 LEU A 137 PRO A 138 GLY A 139 SITE 3 AC1 11 MET A 140 HOH A 271 PHE B 230 SITE 1 AC2 5 ALA A 149 ARG B 148 ALA B 149 HOH B 419 SITE 2 AC2 5 ALA C 149 CRYST1 133.796 133.734 103.450 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007474 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007478 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009667 0.00000