HEADER TRANSFERASE/DNA 14-DEC-10 3PZP TITLE HUMAN DNA POLYMERASE KAPPA EXTENDING OPPOSITE A CIS-SYN THYMINE DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE KAPPA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 19-528; COMPND 5 SYNONYM: DINB PROTEIN, DINP; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*CP*A)-3'; COMPND 10 CHAIN: P, Q; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*TP*TP*CP*CP*(TTD) COMPND 14 P*GP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'; COMPND 15 CHAIN: T, U; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLK, DINB1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BJ5464; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBJ943; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: OLIGONUCLEOTIDE; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 OTHER_DETAILS: OLIGONUCLEOTIDE KEYWDS DNA NUCLEOTIDYLTRANSFERASE, DNA BINDING NUCLEOTIDE BINDING MAGNESIUM KEYWDS 2 BINDING, NUCLEUS, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.VASQUEZ-DEL CARPIO,T.D.SILVERSTEIN,S.LONE,R.E.JOHNSON,S.PRAKASH, AUTHOR 2 L.PRAKASH,A.K.AGGARWAL REVDAT 2 13-SEP-23 3PZP 1 REMARK SEQADV HETSYN LINK REVDAT 1 28-DEC-11 3PZP 0 JRNL AUTH R.VASQUEZ-DEL CARPIO,T.D.SILVERSTEIN,S.LONE,R.E.JOHNSON, JRNL AUTH 2 L.PRAKASH,S.PRAKASH,A.K.AGGARWAL JRNL TITL ROLE OF HUMAN DNA POLYMERASE KAPPA IN EXTENSION OPPOSITE JRNL TITL 2 FROM A CIS-SYN THYMINE DIMER. JRNL REF J.MOL.BIOL. V. 408 252 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21354175 JRNL DOI 10.1016/J.JMB.2011.02.042 REMARK 2 REMARK 2 RESOLUTION. 3.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 27432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1452 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1826 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.3390 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6544 REMARK 3 NUCLEIC ACID ATOMS : 1127 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 97.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81000 REMARK 3 B22 (A**2) : 8.43000 REMARK 3 B33 (A**2) : -9.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.520 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.478 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 51.341 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7974 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 4821 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11072 ; 1.681 ; 2.152 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11881 ; 0.976 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 879 ; 6.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 277 ;40.604 ;25.199 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1084 ;19.574 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.409 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1287 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8190 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1381 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4404 ; 0.303 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1771 ; 0.040 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6992 ; 0.583 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3570 ; 0.900 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4072 ; 1.640 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 78 REMARK 3 ORIGIN FOR THE GROUP (A): 33.7928 38.8429 69.6666 REMARK 3 T TENSOR REMARK 3 T11: 0.9839 T22: 0.9649 REMARK 3 T33: 0.4169 T12: 0.2884 REMARK 3 T13: -0.0225 T23: -0.1625 REMARK 3 L TENSOR REMARK 3 L11: 6.7051 L22: 1.8654 REMARK 3 L33: 7.3332 L12: -1.4282 REMARK 3 L13: -6.3649 L23: -0.4361 REMARK 3 S TENSOR REMARK 3 S11: 0.6526 S12: 0.7646 S13: 0.4713 REMARK 3 S21: 0.3113 S22: -0.1469 S23: -0.0552 REMARK 3 S31: -1.2439 S32: -1.4305 S33: -0.5057 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 79 A 100 REMARK 3 RESIDUE RANGE : A 339 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 23.2863 22.5977 81.5891 REMARK 3 T TENSOR REMARK 3 T11: 0.2540 T22: 1.0894 REMARK 3 T33: 0.5218 T12: -0.0739 REMARK 3 T13: 0.1950 T23: -0.1679 REMARK 3 L TENSOR REMARK 3 L11: 2.4559 L22: 4.9396 REMARK 3 L33: 5.6306 L12: -0.2508 REMARK 3 L13: -0.9353 L23: -2.0757 REMARK 3 S TENSOR REMARK 3 S11: -0.0573 S12: 0.3082 S13: -0.3747 REMARK 3 S21: 0.4449 S22: 0.0093 S23: 1.0132 REMARK 3 S31: -0.0516 S32: -2.0485 S33: 0.0480 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 109 REMARK 3 RESIDUE RANGE : A 171 A 338 REMARK 3 ORIGIN FOR THE GROUP (A): 44.5030 3.3009 74.9567 REMARK 3 T TENSOR REMARK 3 T11: 0.6812 T22: 0.1000 REMARK 3 T33: 0.4357 T12: -0.2310 REMARK 3 T13: 0.1874 T23: -0.0961 REMARK 3 L TENSOR REMARK 3 L11: 4.9309 L22: 3.4855 REMARK 3 L33: 9.7983 L12: 1.8018 REMARK 3 L13: -3.3477 L23: -0.7528 REMARK 3 S TENSOR REMARK 3 S11: -0.5188 S12: 0.3746 S13: -0.8222 REMARK 3 S21: 0.3267 S22: -0.2004 S23: -0.1173 REMARK 3 S31: 1.7461 S32: -0.4775 S33: 0.7191 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): 55.6860 23.5420 63.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.0390 T22: 0.0229 REMARK 3 T33: 0.1326 T12: -0.0206 REMARK 3 T13: 0.0068 T23: 0.0493 REMARK 3 L TENSOR REMARK 3 L11: 5.2174 L22: 10.8651 REMARK 3 L33: 11.6365 L12: -0.1441 REMARK 3 L13: -0.7049 L23: 3.9471 REMARK 3 S TENSOR REMARK 3 S11: -0.0505 S12: 0.0020 S13: -0.0507 REMARK 3 S21: 0.4950 S22: -0.1847 S23: -0.4832 REMARK 3 S31: -0.1746 S32: 0.6140 S33: 0.2352 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 402 A 518 REMARK 3 ORIGIN FOR THE GROUP (A): 31.7950 23.9126 44.5672 REMARK 3 T TENSOR REMARK 3 T11: 0.2816 T22: 1.7441 REMARK 3 T33: 0.4684 T12: 0.1541 REMARK 3 T13: -0.0604 T23: -0.1962 REMARK 3 L TENSOR REMARK 3 L11: 2.0414 L22: 3.5714 REMARK 3 L33: 7.1337 L12: 0.3473 REMARK 3 L13: -1.1199 L23: -1.3978 REMARK 3 S TENSOR REMARK 3 S11: -0.0882 S12: 1.3808 S13: -0.3739 REMARK 3 S21: -0.8386 S22: 0.1317 S23: 0.3932 REMARK 3 S31: 0.4813 S32: -2.4645 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 78 REMARK 3 ORIGIN FOR THE GROUP (A): 37.1105 19.4435 114.7321 REMARK 3 T TENSOR REMARK 3 T11: 1.0706 T22: 1.3748 REMARK 3 T33: 0.7257 T12: 0.2850 REMARK 3 T13: 0.3184 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 3.6656 L22: 0.7390 REMARK 3 L33: 3.8521 L12: -0.5032 REMARK 3 L13: -0.1507 L23: 1.5655 REMARK 3 S TENSOR REMARK 3 S11: -0.9920 S12: -0.1122 S13: 0.2078 REMARK 3 S21: -0.2315 S22: 1.3196 S23: -0.2603 REMARK 3 S31: -0.1176 S32: 1.1172 S33: -0.3276 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 79 B 100 REMARK 3 RESIDUE RANGE : B 339 B 401 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8302 21.6085 100.8496 REMARK 3 T TENSOR REMARK 3 T11: 0.4899 T22: 0.7758 REMARK 3 T33: 0.5225 T12: -0.0440 REMARK 3 T13: 0.2582 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 2.2745 L22: 3.9975 REMARK 3 L33: 3.9093 L12: -1.9782 REMARK 3 L13: -0.7806 L23: -0.6801 REMARK 3 S TENSOR REMARK 3 S11: -0.6397 S12: 0.2847 S13: -0.5302 REMARK 3 S21: 0.2298 S22: 0.3611 S23: 0.7743 REMARK 3 S31: 0.0630 S32: -1.1621 S33: 0.2786 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 101 B 109 REMARK 3 RESIDUE RANGE : B 171 B 338 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5541 48.7449 108.1961 REMARK 3 T TENSOR REMARK 3 T11: 0.9988 T22: 0.6075 REMARK 3 T33: 0.6852 T12: 0.4763 REMARK 3 T13: 0.1484 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 7.3436 L22: 3.3127 REMARK 3 L33: 12.6783 L12: 0.0263 REMARK 3 L13: 1.2089 L23: 4.8179 REMARK 3 S TENSOR REMARK 3 S11: -0.1548 S12: -0.1315 S13: 0.9944 REMARK 3 S21: 0.1590 S22: -0.0163 S23: 0.2979 REMARK 3 S31: -1.1963 S32: -1.1064 S33: 0.1711 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 110 B 170 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5338 44.0157 124.0349 REMARK 3 T TENSOR REMARK 3 T11: 0.8947 T22: 1.0609 REMARK 3 T33: 0.9370 T12: 0.2472 REMARK 3 T13: 0.1534 T23: -0.1136 REMARK 3 L TENSOR REMARK 3 L11: 4.8152 L22: 0.3515 REMARK 3 L33: 18.8318 L12: -1.4193 REMARK 3 L13: 3.5032 L23: 2.0772 REMARK 3 S TENSOR REMARK 3 S11: -0.2887 S12: -0.5557 S13: 0.6622 REMARK 3 S21: -0.3598 S22: 0.3153 S23: -0.6380 REMARK 3 S31: -1.6472 S32: 0.7624 S33: -0.0266 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 402 B 518 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3153 24.0588 137.8269 REMARK 3 T TENSOR REMARK 3 T11: 1.0239 T22: 0.7343 REMARK 3 T33: 0.6083 T12: 0.5600 REMARK 3 T13: 0.3703 T23: 0.1175 REMARK 3 L TENSOR REMARK 3 L11: 4.8499 L22: 1.9215 REMARK 3 L33: 9.4460 L12: -0.1472 REMARK 3 L13: -4.0281 L23: 0.7104 REMARK 3 S TENSOR REMARK 3 S11: -0.9323 S12: -1.3145 S13: -0.8599 REMARK 3 S21: 0.2939 S22: 0.1210 S23: 0.3836 REMARK 3 S31: 1.9797 S32: 0.7984 S33: 0.8113 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000063011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31594 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.230 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11200 REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.86600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2OH2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 5000 MONOMETHYLETHER, 0.2M REMARK 280 POTASSIUM ACETATE, 0.1M SODIUM CHLORIDE, 0.1M SODIUM CACODYLATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.92700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.92700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 58.56800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.23800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 58.56800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.23800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.92700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 58.56800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 77.23800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.92700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 58.56800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 77.23800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Q, U REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 12 REMARK 465 PRO A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 ASP A 16 REMARK 465 PRO A 17 REMARK 465 HIS A 18 REMARK 465 MET A 19 REMARK 465 GLY A 20 REMARK 465 LEU A 21 REMARK 465 ASN A 22 REMARK 465 ASP A 23 REMARK 465 ASN A 24 REMARK 465 MET A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 SER A 228 REMARK 465 VAL A 229 REMARK 465 GLU A 230 REMARK 465 ASN A 231 REMARK 465 ASP A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLY A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 VAL A 238 REMARK 465 ASN A 239 REMARK 465 LYS A 240 REMARK 465 LEU A 241 REMARK 465 SER A 242 REMARK 465 GLU A 243 REMARK 465 HIS A 244 REMARK 465 GLU A 245 REMARK 465 ARG A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 SER A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 LEU A 252 REMARK 465 PHE A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 PRO A 257 REMARK 465 SER A 258 REMARK 465 ASP A 259 REMARK 465 VAL A 260 REMARK 465 GLN A 261 REMARK 465 PRO A 262 REMARK 465 PRO A 263 REMARK 465 GLY A 264 REMARK 465 ASP A 265 REMARK 465 PRO A 266 REMARK 465 PHE A 267 REMARK 465 GLN A 268 REMARK 465 VAL A 269 REMARK 465 ASN A 270 REMARK 465 PHE A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLN A 274 REMARK 465 ASN A 275 REMARK 465 ASN A 276 REMARK 465 PRO A 277 REMARK 465 GLN A 278 REMARK 465 ILE A 279 REMARK 465 LEU A 280 REMARK 465 ASP A 521 REMARK 465 ARG A 522 REMARK 465 LYS A 523 REMARK 465 HIS A 524 REMARK 465 GLN A 525 REMARK 465 GLN A 526 REMARK 465 ARG A 527 REMARK 465 SER A 528 REMARK 465 GLY B 12 REMARK 465 PRO B 13 REMARK 465 GLY B 14 REMARK 465 GLY B 15 REMARK 465 ASP B 16 REMARK 465 PRO B 17 REMARK 465 HIS B 18 REMARK 465 MET B 225 REMARK 465 GLY B 226 REMARK 465 SER B 227 REMARK 465 SER B 228 REMARK 465 VAL B 229 REMARK 465 GLU B 230 REMARK 465 ASN B 231 REMARK 465 ASP B 232 REMARK 465 ASN B 233 REMARK 465 PRO B 234 REMARK 465 GLY B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 VAL B 238 REMARK 465 ASN B 239 REMARK 465 LYS B 240 REMARK 465 LEU B 241 REMARK 465 SER B 242 REMARK 465 GLU B 243 REMARK 465 HIS B 244 REMARK 465 GLU B 245 REMARK 465 ARG B 246 REMARK 465 SER B 247 REMARK 465 ILE B 248 REMARK 465 SER B 249 REMARK 465 PRO B 250 REMARK 465 LEU B 251 REMARK 465 LEU B 252 REMARK 465 PHE B 253 REMARK 465 GLU B 254 REMARK 465 GLU B 255 REMARK 465 SER B 256 REMARK 465 PRO B 257 REMARK 465 SER B 258 REMARK 465 ASP B 259 REMARK 465 VAL B 260 REMARK 465 GLN B 261 REMARK 465 PRO B 262 REMARK 465 PRO B 263 REMARK 465 GLY B 264 REMARK 465 ASP B 265 REMARK 465 PRO B 266 REMARK 465 PHE B 267 REMARK 465 GLN B 268 REMARK 465 VAL B 269 REMARK 465 ASN B 270 REMARK 465 PHE B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLN B 274 REMARK 465 ASN B 275 REMARK 465 ASN B 276 REMARK 465 PRO B 277 REMARK 465 GLN B 278 REMARK 465 ILE B 279 REMARK 465 LEU B 280 REMARK 465 GLN B 281 REMARK 465 GLU B 519 REMARK 465 GLU B 520 REMARK 465 ASP B 521 REMARK 465 ARG B 522 REMARK 465 LYS B 523 REMARK 465 HIS B 524 REMARK 465 GLN B 525 REMARK 465 GLN B 526 REMARK 465 ARG B 527 REMARK 465 SER B 528 REMARK 465 DT T 2 REMARK 465 DT T 3 REMARK 465 DG Q 1 REMARK 465 DT U 2 REMARK 465 DT U 3 REMARK 465 DC U 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 LYS A 35 CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 55 CE NZ REMARK 470 LYS A 56 CE NZ REMARK 470 GLN A 70 CG CD OE1 NE2 REMARK 470 LYS A 71 CG CD CE NZ REMARK 470 ILE A 74 CG1 CG2 CD1 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 149 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 PHE A 222 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 LYS A 363 CE NZ REMARK 470 TYR A 394 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 410 CG OD1 OD2 REMARK 470 LYS A 414 CG CD CE NZ REMARK 470 LYS A 427 CG CD CE NZ REMARK 470 GLU A 429 CG CD OE1 OE2 REMARK 470 LYS A 448 CG CD CE NZ REMARK 470 GLU A 449 CG CD OE1 OE2 REMARK 470 ARG A 450 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 ARG A 454 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 459 CG CD CE NZ REMARK 470 LEU A 460 CG CD1 CD2 REMARK 470 LYS A 461 CG CD CE NZ REMARK 470 VAL A 474 CG1 CG2 REMARK 470 LYS A 489 CG CD CE NZ REMARK 470 ARG A 512 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 21 CG CD1 CD2 REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 LYS B 35 CD CE NZ REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 ILE B 40 CG1 CG2 CD1 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 ARG B 48 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 56 CG CD CE NZ REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLN B 59 CG CD OE1 NE2 REMARK 470 ARG B 63 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 73 CG CD OE1 NE2 REMARK 470 LEU B 79 CG CD1 CD2 REMARK 470 ARG B 80 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 84 CG CD1 CD2 REMARK 470 GLN B 85 CG CD OE1 NE2 REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 MET B 91 CG SD CE REMARK 470 GLN B 95 CG CD OE1 NE2 REMARK 470 ARG B 97 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 99 CG CD1 CD2 REMARK 470 ILE B 106 CG1 CG2 CD1 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LEU B 123 CG CD1 CD2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 ILE B 128 CG1 CG2 CD1 REMARK 470 VAL B 130 CG1 CG2 REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 ARG B 159 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 163 CG CD OE1 NE2 REMARK 470 ILE B 165 CG1 CG2 CD1 REMARK 470 PHE B 171 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 175 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 LEU B 197 CG CD1 CD2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 ASP B 217 CG OD1 OD2 REMARK 470 LYS B 218 CG CD CE NZ REMARK 470 ARG B 219 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 220 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 222 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE B 223 CG1 CG2 CD1 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 VAL B 285 CG1 CG2 REMARK 470 GLN B 303 CG CD OE1 NE2 REMARK 470 LYS B 304 CG CD CE NZ REMARK 470 LEU B 307 CG CD1 CD2 REMARK 470 LYS B 321 CG CD CE NZ REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 LEU B 385 CG CD1 CD2 REMARK 470 LEU B 400 CG CD1 CD2 REMARK 470 LEU B 402 CG CD1 CD2 REMARK 470 HIS B 406 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 409 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 LYS B 414 CG CD CE NZ REMARK 470 ARG B 420 CD NE CZ NH1 NH2 REMARK 470 ILE B 425 CG1 CG2 CD1 REMARK 470 LEU B 434 CG CD1 CD2 REMARK 470 LEU B 438 CG CD1 CD2 REMARK 470 GLN B 447 CG CD OE1 NE2 REMARK 470 LYS B 448 CG CD CE NZ REMARK 470 ARG B 450 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 451 CG CD1 CD2 REMARK 470 LYS B 452 CG CD CE NZ REMARK 470 LYS B 459 CG CD CE NZ REMARK 470 LEU B 460 CG CD1 CD2 REMARK 470 GLU B 466 CG CD OE1 OE2 REMARK 470 ARG B 470 CG CD NE CZ NH1 NH2 REMARK 470 SER B 472 OG REMARK 470 LYS B 489 CG CD CE NZ REMARK 470 LYS B 493 CG CD CE NZ REMARK 470 ASP B 497 CG OD1 OD2 REMARK 470 ASP B 499 CG OD1 OD2 REMARK 470 PHE B 500 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS B 502 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 505 CG CD NE CZ NH1 NH2 REMARK 470 MET B 509 CG SD CE REMARK 470 ARG B 512 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 518 CG OD1 ND2 REMARK 470 DA P 13 O3' REMARK 470 DC T 4 P OP1 OP2 REMARK 470 DG Q 2 P OP1 OP2 REMARK 470 DA Q 13 O3' REMARK 470 DC U 4 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1B DTP A 1 MG MG A 2 1.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC T 5 O3' DC T 5 C3' -0.044 REMARK 500 DC Q 11 O3' DC Q 11 C3' -0.049 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 380 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG P 1 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 DG P 1 C3' - O3' - P ANGL. DEV. = 8.3 DEGREES REMARK 500 DG P 2 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG P 3 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG P 4 O4' - C1' - N9 ANGL. DEV. = 6.0 DEGREES REMARK 500 DG P 5 O4' - C1' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DG P 5 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DA P 6 C3' - C2' - C1' ANGL. DEV. = -4.8 DEGREES REMARK 500 DG P 8 C1' - O4' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DG P 8 O4' - C1' - N9 ANGL. DEV. = -4.5 DEGREES REMARK 500 DC T 4 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DC T 4 C3' - O3' - P ANGL. DEV. = 7.9 DEGREES REMARK 500 DC T 5 O5' - P - OP2 ANGL. DEV. = -8.1 DEGREES REMARK 500 DG T 7 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG T 8 N1 - C6 - O6 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT T 9 O5' - C5' - C4' ANGL. DEV. = -5.6 DEGREES REMARK 500 DC T 10 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC T 11 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 DT T 12 O4' - C1' - C2' ANGL. DEV. = -5.5 DEGREES REMARK 500 DT T 12 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC T 14 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC T 15 O4' - C4' - C3' ANGL. DEV. = -4.8 DEGREES REMARK 500 DC T 15 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC T 16 O4' - C1' - N1 ANGL. DEV. = 6.4 DEGREES REMARK 500 DC T 18 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG Q 2 C3' - O3' - P ANGL. DEV. = 8.7 DEGREES REMARK 500 DG Q 3 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC Q 11 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DC Q 12 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DC U 4 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC U 4 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 DC U 5 O4' - C4' - C3' ANGL. DEV. = -5.0 DEGREES REMARK 500 DC U 5 C3' - O3' - P ANGL. DEV. = 24.9 DEGREES REMARK 500 TTD U 6 C3' - O3' - P ANGL. DEV. = 8.0 DEGREES REMARK 500 DG U 7 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 DG U 8 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC U 10 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT U 12 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES REMARK 500 DT U 12 N3 - C4 - O4 ANGL. DEV. = 3.8 DEGREES REMARK 500 DC U 14 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 34 -75.23 -58.32 REMARK 500 GLU A 42 -53.32 -27.35 REMARK 500 ALA A 43 42.15 -80.89 REMARK 500 THR A 44 -41.92 -164.09 REMARK 500 LYS A 45 -52.10 -23.18 REMARK 500 ALA A 72 -38.81 -39.93 REMARK 500 ALA A 82 -39.22 -39.17 REMARK 500 GLN A 83 -78.98 -54.90 REMARK 500 PHE A 111 -70.88 -40.80 REMARK 500 ASP A 125 43.88 -105.91 REMARK 500 PRO A 190 -8.48 -53.40 REMARK 500 THR A 205 -55.68 -21.40 REMARK 500 ILE A 223 75.56 -108.74 REMARK 500 THR A 306 -9.53 76.08 REMARK 500 ASN A 330 71.19 52.36 REMARK 500 ASN A 338 162.38 175.21 REMARK 500 VAL A 360 -71.10 -82.19 REMARK 500 ASP A 410 -59.09 -16.37 REMARK 500 GLU A 412 128.08 174.44 REMARK 500 GLU A 424 126.87 -39.58 REMARK 500 PHE A 465 -4.64 74.29 REMARK 500 SER A 476 -76.41 -71.87 REMARK 500 VAL A 477 136.41 156.85 REMARK 500 SER A 479 -30.29 -159.03 REMARK 500 PRO A 501 42.34 -86.51 REMARK 500 SER A 514 -151.71 -139.21 REMARK 500 SER A 515 177.52 63.55 REMARK 500 ASN A 518 -169.40 -116.73 REMARK 500 ALA B 26 -64.65 83.04 REMARK 500 MET B 28 99.39 -62.66 REMARK 500 ASP B 32 50.34 -109.47 REMARK 500 LYS B 33 -9.19 -58.25 REMARK 500 GLU B 34 -75.53 -62.02 REMARK 500 GLN B 73 35.82 -94.37 REMARK 500 PHE B 111 -77.01 -46.36 REMARK 500 LYS B 124 -70.72 -68.61 REMARK 500 ALA B 129 112.30 -163.10 REMARK 500 MET B 135 142.53 -178.18 REMARK 500 ARG B 145 0.05 -66.30 REMARK 500 VAL B 148 102.96 -48.97 REMARK 500 CYS B 161 85.26 -152.56 REMARK 500 ASN B 170 66.30 -159.36 REMARK 500 PHE B 171 -2.32 -55.19 REMARK 500 ASP B 187 -15.78 -48.79 REMARK 500 ASP B 198 25.07 -157.79 REMARK 500 GLU B 199 106.98 -168.23 REMARK 500 ILE B 204 32.52 -85.75 REMARK 500 GLU B 209 -5.67 -58.33 REMARK 500 ARG B 211 -38.49 -33.47 REMARK 500 VAL B 284 138.73 -172.37 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 2 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DTP A 1 O1G REMARK 620 2 DTP A 1 O1A 74.9 REMARK 620 3 MET A 108 O 85.8 154.5 REMARK 620 4 ASP A 198 OD2 167.9 95.6 100.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 352 O REMARK 620 2 VAL A 354 O 82.9 REMARK 620 3 ILE A 357 O 75.5 86.9 REMARK 620 4 DC P 12 OP1 152.1 90.9 77.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DTP B 2 O1A REMARK 620 2 DTP B 2 O2B 75.0 REMARK 620 3 DTP B 2 O1G 120.8 70.1 REMARK 620 4 ASP B 107 OD1 133.5 130.6 105.4 REMARK 620 5 ASP B 107 OD2 104.1 176.5 113.0 47.8 REMARK 620 6 MET B 108 O 135.2 63.5 60.6 71.7 116.3 REMARK 620 7 ASP B 198 OD2 71.8 65.8 128.3 84.6 110.7 76.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 4 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 352 O REMARK 620 2 ILE B 357 O 87.6 REMARK 620 3 DC Q 12 OP1 132.2 70.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T94 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE REMARK 900 KAPPA REMARK 900 RELATED ID: 2OH2 RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF HUMAN DNA POLYMERASE KAPPA REMARK 900 RELATED ID: 3IN5 RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN DNA POLYMERASE KAPPA INSERTING DATP OPPOSITE AN REMARK 900 8-OXOG DNA LESION DBREF 3PZP A 19 528 UNP Q9UBT6 POLK_HUMAN 19 528 DBREF 3PZP B 19 528 UNP Q9UBT6 POLK_HUMAN 19 528 DBREF 3PZP P 1 13 PDB 3PZP 3PZP 1 13 DBREF 3PZP Q 1 13 PDB 3PZP 3PZP 1 13 DBREF 3PZP T 2 18 PDB 3PZP 3PZP 2 18 DBREF 3PZP U 2 18 PDB 3PZP 3PZP 2 18 SEQADV 3PZP GLY A 12 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP PRO A 13 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP GLY A 14 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP GLY A 15 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP ASP A 16 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP PRO A 17 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP HIS A 18 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP GLY B 12 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP PRO B 13 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP GLY B 14 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP GLY B 15 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP ASP B 16 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP PRO B 17 UNP Q9UBT6 EXPRESSION TAG SEQADV 3PZP HIS B 18 UNP Q9UBT6 EXPRESSION TAG SEQRES 1 A 517 GLY PRO GLY GLY ASP PRO HIS MET GLY LEU ASN ASP ASN SEQRES 2 A 517 LYS ALA GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN SEQRES 3 A 517 LYS ILE ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR SEQRES 4 A 517 GLY ASN GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG SEQRES 5 A 517 ILE GLU ASN MET MET GLN GLN LYS ALA GLN ILE THR SER SEQRES 6 A 517 GLN GLN LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE SEQRES 7 A 517 ALA MET GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR SEQRES 8 A 517 ILE VAL HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL SEQRES 9 A 517 GLU MET ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE SEQRES 10 A 517 ALA VAL GLY SER MET SER MET LEU SER THR SER ASN TYR SEQRES 11 A 517 HIS ALA ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY SEQRES 12 A 517 PHE ILE ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL SEQRES 13 A 517 PRO PRO ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU SEQRES 14 A 517 VAL LYS GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET SEQRES 15 A 517 ALA MET SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS SEQRES 16 A 517 HIS LEU GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG SEQRES 17 A 517 ARG TYR PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP SEQRES 18 A 517 ASN PRO GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU SEQRES 19 A 517 ARG SER ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER SEQRES 20 A 517 ASP VAL GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE SEQRES 21 A 517 GLU GLU GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL SEQRES 22 A 517 VAL PHE GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE SEQRES 23 A 517 ARG PHE ARG ILE GLU GLN LYS THR THR LEU THR ALA SER SEQRES 24 A 517 ALA GLY ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SEQRES 25 A 517 SER ASP LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU SEQRES 26 A 517 PRO ASN ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU SEQRES 27 A 517 PRO ILE ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU SEQRES 28 A 517 LYS MET LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU SEQRES 29 A 517 LEU TYR GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER SEQRES 30 A 517 GLU THR SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY SEQRES 31 A 517 LEU GLY SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SEQRES 32 A 517 SER MET SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS SEQRES 33 A 517 ALA GLU GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER SEQRES 34 A 517 GLU LEU ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY SEQRES 35 A 517 ARG THR VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU SEQRES 36 A 517 VAL LYS THR ARG ALA SER THR VAL SER SER VAL VAL SER SEQRES 37 A 517 THR ALA GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU SEQRES 38 A 517 LYS THR GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG SEQRES 39 A 517 LEU ARG LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN SEQRES 40 A 517 GLU GLU ASP ARG LYS HIS GLN GLN ARG SER SEQRES 1 B 517 GLY PRO GLY GLY ASP PRO HIS MET GLY LEU ASN ASP ASN SEQRES 2 B 517 LYS ALA GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN SEQRES 3 B 517 LYS ILE ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR SEQRES 4 B 517 GLY ASN GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG SEQRES 5 B 517 ILE GLU ASN MET MET GLN GLN LYS ALA GLN ILE THR SER SEQRES 6 B 517 GLN GLN LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE SEQRES 7 B 517 ALA MET GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR SEQRES 8 B 517 ILE VAL HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL SEQRES 9 B 517 GLU MET ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE SEQRES 10 B 517 ALA VAL GLY SER MET SER MET LEU SER THR SER ASN TYR SEQRES 11 B 517 HIS ALA ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY SEQRES 12 B 517 PHE ILE ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL SEQRES 13 B 517 PRO PRO ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU SEQRES 14 B 517 VAL LYS GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET SEQRES 15 B 517 ALA MET SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS SEQRES 16 B 517 HIS LEU GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG SEQRES 17 B 517 ARG TYR PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP SEQRES 18 B 517 ASN PRO GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU SEQRES 19 B 517 ARG SER ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER SEQRES 20 B 517 ASP VAL GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE SEQRES 21 B 517 GLU GLU GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL SEQRES 22 B 517 VAL PHE GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE SEQRES 23 B 517 ARG PHE ARG ILE GLU GLN LYS THR THR LEU THR ALA SER SEQRES 24 B 517 ALA GLY ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SEQRES 25 B 517 SER ASP LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU SEQRES 26 B 517 PRO ASN ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU SEQRES 27 B 517 PRO ILE ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU SEQRES 28 B 517 LYS MET LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU SEQRES 29 B 517 LEU TYR GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER SEQRES 30 B 517 GLU THR SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY SEQRES 31 B 517 LEU GLY SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SEQRES 32 B 517 SER MET SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS SEQRES 33 B 517 ALA GLU GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER SEQRES 34 B 517 GLU LEU ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY SEQRES 35 B 517 ARG THR VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU SEQRES 36 B 517 VAL LYS THR ARG ALA SER THR VAL SER SER VAL VAL SER SEQRES 37 B 517 THR ALA GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU SEQRES 38 B 517 LYS THR GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG SEQRES 39 B 517 LEU ARG LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN SEQRES 40 B 517 GLU GLU ASP ARG LYS HIS GLN GLN ARG SER SEQRES 1 P 13 DG DG DG DG DG DA DA DG DG DA DC DC DA SEQRES 1 T 17 DT DT DC DC TTD DG DG DT DC DC DT DT DC SEQRES 2 T 17 DC DC DC DC SEQRES 1 Q 13 DG DG DG DG DG DA DA DG DG DA DC DC DA SEQRES 1 U 17 DT DT DC DC TTD DG DG DT DC DC DT DT DC SEQRES 2 U 17 DC DC DC DC MODRES 3PZP TTD T 6 DT CIS-SYN CYCLOBUTANE THYMINE DIMER MODRES 3PZP TTD U 6 DT CIS-SYN CYCLOBUTANE THYMINE DIMER HET TTD T 6 40 HET TTD U 6 40 HET DTP A 1 30 HET MG A 2 1 HET MG A 3 1 HET DTP B 2 30 HET MG B 1 1 HET MG B 4 1 HETNAM TTD CIS-SYN CYCLOBUTANE THYMINE DIMER HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN TTD [(3S,4S,9S,10R,12R,15AR,18BS,18CS)-3,7-DIHYDROXY-15A, HETSYN 2 TTD 15B-DIMETHYL-7-OXIDO-13,15,16,18- HETSYN 3 TTD TETRAOXOHEXADECAHYDRO-1H-1,4-EPOX Y-9,12-METHANO-6,8, HETSYN 4 TTD 11-TRIOXA-12A,14,17,18A-TETRAAZA-7- HETSYN 5 TTD PHOSPHACYCLOHEXADECA[1,2,3,4-DEF]BIPHENYLEN-10- HETSYN 6 TTD YL]METHYL DIHYDROGEN PHOSPHATE FORMUL 4 TTD 2(C20 H28 N4 O15 P2) FORMUL 7 DTP 2(C10 H16 N5 O12 P3) FORMUL 8 MG 4(MG 2+) FORMUL 13 HOH *8(H2 O) HELIX 1 1 ASP A 32 ALA A 43 1 12 HELIX 2 2 SER A 47 GLN A 73 1 27 HELIX 3 3 THR A 75 ARG A 97 1 23 HELIX 4 4 ALA A 110 ASN A 120 1 11 HELIX 5 5 PRO A 121 LYS A 124 5 4 HELIX 6 6 ASN A 140 ARG A 145 1 6 HELIX 7 7 PRO A 153 CYS A 161 1 9 HELIX 8 8 ASN A 170 ASP A 187 1 18 HELIX 9 9 ILE A 204 GLN A 212 1 9 HELIX 10 10 SER A 289 THR A 306 1 18 HELIX 11 11 ASN A 316 LYS A 326 1 11 HELIX 12 12 ASN A 338 LYS A 347 1 10 HELIX 13 13 ASP A 348 LEU A 349 5 2 HELIX 14 14 PRO A 350 VAL A 354 5 5 HELIX 15 15 GLY A 358 LEU A 368 1 11 HELIX 16 16 THR A 372 PHE A 387 1 16 HELIX 17 17 SER A 388 LEU A 400 1 13 HELIX 18 18 LYS A 427 LYS A 448 1 22 HELIX 19 19 THR A 480 PHE A 500 1 21 HELIX 20 20 ASP B 32 LYS B 45 1 14 HELIX 21 21 SER B 47 GLN B 73 1 27 HELIX 22 22 THR B 75 GLN B 95 1 21 HELIX 23 23 ALA B 110 ASN B 120 1 11 HELIX 24 24 PRO B 121 LYS B 124 5 4 HELIX 25 25 ASN B 140 ARG B 145 1 6 HELIX 26 26 PRO B 153 CYS B 161 1 9 HELIX 27 27 ASN B 170 ASP B 187 1 18 HELIX 28 28 ILE B 204 GLN B 212 1 9 HELIX 29 29 SER B 289 THR B 306 1 18 HELIX 30 30 ASN B 316 SER B 324 1 9 HELIX 31 31 ASN B 338 ASP B 348 1 11 HELIX 32 32 PRO B 350 VAL B 354 5 5 HELIX 33 33 GLY B 358 LEU B 368 1 11 HELIX 34 34 THR B 372 PHE B 387 1 16 HELIX 35 35 SER B 388 LEU B 400 1 13 HELIX 36 36 GLU B 429 LYS B 448 1 20 HELIX 37 37 THR B 480 ALA B 498 1 19 SHEET 1 A 4 GLU A 199 ASN A 203 0 SHEET 2 A 4 ILE A 103 MET A 108 -1 N VAL A 104 O LEU A 202 SHEET 3 A 4 ALA A 309 ALA A 314 -1 O SER A 310 N ASP A 107 SHEET 4 A 4 GLN A 332 GLN A 334 1 O TYR A 333 N ILE A 313 SHEET 1 B 3 MET A 135 SER A 139 0 SHEET 2 B 3 ILE A 128 SER A 132 -1 N VAL A 130 O SER A 137 SHEET 3 B 3 ILE A 165 VAL A 167 1 O VAL A 167 N GLY A 131 SHEET 1 C 2 ARG A 220 PHE A 222 0 SHEET 2 C 2 SER A 283 VAL A 285 -1 O VAL A 284 N TYR A 221 SHEET 1 D 4 MET A 416 ILE A 425 0 SHEET 2 D 4 LEU A 506 ILE A 513 -1 O VAL A 511 N VAL A 418 SHEET 3 D 4 VAL A 456 ASN A 462 -1 N LYS A 459 O GLY A 510 SHEET 4 D 4 VAL A 467 ARG A 470 -1 O ARG A 470 N ILE A 458 SHEET 1 E 4 MET B 193 SER B 196 0 SHEET 2 E 4 GLU B 199 LEU B 202 -1 O GLU B 199 N MET B 195 SHEET 3 E 4 ILE B 103 MET B 108 -1 N ILE B 106 O ALA B 200 SHEET 4 E 4 ALA B 309 ALA B 314 -1 O ALA B 314 N ILE B 103 SHEET 1 F 3 MET B 135 LEU B 136 0 SHEET 2 F 3 ILE B 128 SER B 132 -1 N SER B 132 O MET B 135 SHEET 3 F 3 ILE B 165 VAL B 167 1 O VAL B 167 N GLY B 131 SHEET 1 G 2 ARG B 220 TYR B 221 0 SHEET 2 G 2 VAL B 284 VAL B 285 -1 O VAL B 284 N TYR B 221 SHEET 1 H 4 SER B 415 ILE B 425 0 SHEET 2 H 4 LEU B 506 SER B 514 -1 O MET B 509 N ARG B 420 SHEET 3 H 4 GLY B 453 ASN B 462 -1 N LYS B 459 O GLY B 510 SHEET 4 H 4 VAL B 467 LYS B 468 -1 O LYS B 468 N LEU B 460 SHEET 1 I 4 SER B 415 ILE B 425 0 SHEET 2 I 4 LEU B 506 SER B 514 -1 O MET B 509 N ARG B 420 SHEET 3 I 4 GLY B 453 ASN B 462 -1 N LYS B 459 O GLY B 510 SHEET 4 I 4 ALA B 471 VAL B 478 -1 O VAL B 478 N GLY B 453 LINK O3' DC T 5 P TTD T 6 1555 1555 1.61 LINK O3' TTD T 6 P DG T 7 1555 1555 1.61 LINK O3' DC U 5 P TTD U 6 1555 1555 1.61 LINK O3' TTD U 6 P DG U 7 1555 1555 1.61 LINK O1G DTP A 1 MG MG A 2 1555 1555 2.27 LINK O1A DTP A 1 MG MG A 2 1555 1555 2.30 LINK MG MG A 2 O MET A 108 1555 1555 2.09 LINK MG MG A 2 OD2 ASP A 198 1555 1555 2.22 LINK MG MG A 3 O ARG A 352 1555 1555 2.75 LINK MG MG A 3 O VAL A 354 1555 1555 2.46 LINK MG MG A 3 O ILE A 357 1555 1555 2.71 LINK MG MG A 3 OP1 DC P 12 1555 1555 2.63 LINK MG MG B 1 O1A DTP B 2 1555 1555 2.13 LINK MG MG B 1 O2B DTP B 2 1555 1555 2.17 LINK MG MG B 1 O1G DTP B 2 1555 1555 2.34 LINK MG MG B 1 OD1 ASP B 107 1555 1555 2.01 LINK MG MG B 1 OD2 ASP B 107 1555 1555 2.96 LINK MG MG B 1 O MET B 108 1555 1555 2.89 LINK MG MG B 1 OD2 ASP B 198 1555 1555 2.82 LINK MG MG B 4 O ARG B 352 1555 1555 2.71 LINK MG MG B 4 O ILE B 357 1555 1555 2.58 LINK MG MG B 4 OP1 DC Q 12 1555 1555 2.91 CISPEP 1 LYS A 328 PRO A 329 0 -14.05 CISPEP 2 PHE A 500 PRO A 501 0 8.32 CISPEP 3 GLY B 30 LEU B 31 0 -16.90 CISPEP 4 LYS B 328 PRO B 329 0 3.13 CISPEP 5 ARG B 409 ASP B 410 0 2.81 CISPEP 6 PHE B 500 PRO B 501 0 8.09 SITE 1 AC1 16 MG A 2 ALA A 26 ASP A 107 MET A 108 SITE 2 AC1 16 ASP A 109 ALA A 110 PHE A 111 TYR A 112 SITE 3 AC1 16 SER A 137 THR A 138 TYR A 141 ARG A 144 SITE 4 AC1 16 ASP A 198 LYS A 328 DA P 13 TTD T 6 SITE 1 AC2 4 DTP A 1 ASP A 107 MET A 108 ASP A 198 SITE 1 AC3 4 ARG A 352 VAL A 354 ILE A 357 DC P 12 SITE 1 AC4 17 MG B 1 ALA B 26 ASP B 107 MET B 108 SITE 2 AC4 17 ALA B 110 PHE B 111 TYR B 112 SER B 137 SITE 3 AC4 17 THR B 138 TYR B 141 ARG B 144 ALA B 151 SITE 4 AC4 17 ASP B 198 GLU B 199 LYS B 328 DA Q 13 SITE 5 AC4 17 TTD U 6 SITE 1 AC5 4 DTP B 2 ASP B 107 MET B 108 ASP B 198 SITE 1 AC6 4 ARG B 352 VAL B 354 ILE B 357 DC Q 12 CRYST1 117.136 154.476 217.854 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008537 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006473 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004590 0.00000