HEADER TRANSFERASE 15-DEC-10 3Q04 TITLE CRYSTAL STRUCTURE OF THE APO-FORM OF HUMAN CK2 ALPHA AT PH 8.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 3-330; COMPND 5 SYNONYM: CK II ALPHA; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSNK2A1, CK2A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS PROTEIN KINASE, APO-FORM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.BATTISTUTTA,A.RANCHIO,E.PAPINUTTO REVDAT 2 01-NOV-23 3Q04 1 REMARK REVDAT 1 21-DEC-11 3Q04 0 JRNL AUTH E.PAPINUTTO,A.RANCHIO,G.LOLLI,L.A.PINNA,R.BATTISTUTTA JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE FLEXIBLE REGIONS JRNL TITL 2 OF THE CATALYTIC ALPHA-SUBUNIT OF PROTEIN KINASE CK2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 29490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1498 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2042 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2773 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 253 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.53000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.693 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2879 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3898 ; 1.915 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 333 ; 5.820 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;33.774 ;23.097 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 511 ;14.662 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;23.397 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 404 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2214 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1648 ; 1.250 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2683 ; 2.050 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1231 ; 3.411 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1212 ; 5.150 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4930 -30.9960 -45.6940 REMARK 3 T TENSOR REMARK 3 T11: 0.1438 T22: 0.0604 REMARK 3 T33: 0.2184 T12: -0.0131 REMARK 3 T13: 0.0803 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 5.7626 L22: 0.5300 REMARK 3 L33: 8.1163 L12: 1.4850 REMARK 3 L13: -4.8402 L23: -0.6050 REMARK 3 S TENSOR REMARK 3 S11: -0.4611 S12: 0.3844 S13: -0.6308 REMARK 3 S21: -0.0325 S22: 0.1156 S23: -0.1405 REMARK 3 S31: 0.5518 S32: -0.3209 S33: 0.3455 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8080 -20.5450 -47.2310 REMARK 3 T TENSOR REMARK 3 T11: 0.0505 T22: 0.1034 REMARK 3 T33: 0.1221 T12: 0.0254 REMARK 3 T13: 0.0014 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 3.1286 L22: 2.7963 REMARK 3 L33: 1.5461 L12: 2.1935 REMARK 3 L13: 0.0438 L23: 0.7846 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.1704 S13: -0.3968 REMARK 3 S21: 0.1698 S22: 0.0184 S23: -0.1614 REMARK 3 S31: 0.1483 S32: 0.1574 S33: -0.0120 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8440 -14.5430 -46.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0822 REMARK 3 T33: 0.0714 T12: -0.0026 REMARK 3 T13: -0.0076 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 3.9700 L22: 1.4456 REMARK 3 L33: 0.9591 L12: 1.6054 REMARK 3 L13: 0.7297 L23: 0.7139 REMARK 3 S TENSOR REMARK 3 S11: 0.0853 S12: 0.0464 S13: -0.1920 REMARK 3 S21: 0.1120 S22: -0.0577 S23: -0.1343 REMARK 3 S31: 0.0380 S32: 0.0965 S33: -0.0276 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6240 1.0520 -46.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.4222 T22: 0.2930 REMARK 3 T33: 0.4648 T12: 0.0566 REMARK 3 T13: -0.0265 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.3026 L22: 4.1172 REMARK 3 L33: 2.1057 L12: -1.0571 REMARK 3 L13: 0.3017 L23: 1.9854 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: -0.0215 S13: 0.7591 REMARK 3 S21: 0.3255 S22: -0.0839 S23: -0.0134 REMARK 3 S31: -0.3706 S32: -0.2057 S33: 0.1768 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 128 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8670 -14.2230 -39.9380 REMARK 3 T TENSOR REMARK 3 T11: 0.0635 T22: 0.0633 REMARK 3 T33: 0.0679 T12: 0.0028 REMARK 3 T13: -0.0225 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.3143 L22: 0.5623 REMARK 3 L33: 0.6303 L12: -0.0202 REMARK 3 L13: -0.5061 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.0706 S13: -0.0489 REMARK 3 S21: 0.0775 S22: 0.0175 S23: -0.0254 REMARK 3 S31: -0.0241 S32: -0.0076 S33: 0.0090 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 281 A 330 REMARK 3 ORIGIN FOR THE GROUP (A): -10.4870 -8.6840 -49.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.0087 T22: 0.1225 REMARK 3 T33: 0.0575 T12: 0.0053 REMARK 3 T13: -0.0120 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.9569 L22: 1.4391 REMARK 3 L33: 1.2162 L12: -0.0758 REMARK 3 L13: -0.3657 L23: 0.0418 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: 0.2351 S13: 0.0284 REMARK 3 S21: -0.0222 S22: 0.0077 S23: 0.0845 REMARK 3 S31: -0.0715 S32: -0.1994 S33: -0.0363 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES REMARK 4 REMARK 4 3Q04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29505 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 59.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.39700 REMARK 200 R SYM FOR SHELL (I) : 0.39700 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2PVR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2M LITHIUM SULFATE, REMARK 280 0.1M TRISHCL, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.03250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 307 CG TYR A 307 CD2 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 8 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 132 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 228 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 283 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 283 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 156 45.86 -148.08 REMARK 500 ASP A 175 68.04 60.43 REMARK 500 ALA A 193 171.99 60.04 REMARK 500 MET A 208 56.82 -93.94 REMARK 500 HIS A 234 74.25 -105.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 332 DBREF 3Q04 A 3 330 UNP P68400 CSK21_HUMAN 3 330 SEQRES 1 A 328 GLY PRO VAL PRO SER ARG ALA ARG VAL TYR THR ASP VAL SEQRES 2 A 328 ASN THR HIS ARG PRO ARG GLU TYR TRP ASP TYR GLU SER SEQRES 3 A 328 HIS VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR GLN LEU SEQRES 4 A 328 VAL ARG LYS LEU GLY ARG GLY LYS TYR SER GLU VAL PHE SEQRES 5 A 328 GLU ALA ILE ASN ILE THR ASN ASN GLU LYS VAL VAL VAL SEQRES 6 A 328 LYS ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE LYS ARG SEQRES 7 A 328 GLU ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY PRO ASN SEQRES 8 A 328 ILE ILE THR LEU ALA ASP ILE VAL LYS ASP PRO VAL SER SEQRES 9 A 328 ARG THR PRO ALA LEU VAL PHE GLU HIS VAL ASN ASN THR SEQRES 10 A 328 ASP PHE LYS GLN LEU TYR GLN THR LEU THR ASP TYR ASP SEQRES 11 A 328 ILE ARG PHE TYR MET TYR GLU ILE LEU LYS ALA LEU ASP SEQRES 12 A 328 TYR CYS HIS SER MET GLY ILE MET HIS ARG ASP VAL LYS SEQRES 13 A 328 PRO HIS ASN VAL MET ILE ASP HIS GLU HIS ARG LYS LEU SEQRES 14 A 328 ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR HIS PRO SEQRES 15 A 328 GLY GLN GLU TYR ASN VAL ARG VAL ALA SER ARG TYR PHE SEQRES 16 A 328 LYS GLY PRO GLU LEU LEU VAL ASP TYR GLN MET TYR ASP SEQRES 17 A 328 TYR SER LEU ASP MET TRP SER LEU GLY CYS MET LEU ALA SEQRES 18 A 328 SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS GLY HIS SEQRES 19 A 328 ASP ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS VAL LEU SEQRES 20 A 328 GLY THR GLU ASP LEU TYR ASP TYR ILE ASP LYS TYR ASN SEQRES 21 A 328 ILE GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU GLY ARG SEQRES 22 A 328 HIS SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SER GLU SEQRES 23 A 328 ASN GLN HIS LEU VAL SER PRO GLU ALA LEU ASP PHE LEU SEQRES 24 A 328 ASP LYS LEU LEU ARG TYR ASP HIS GLN SER ARG LEU THR SEQRES 25 A 328 ALA ARG GLU ALA MET GLU HIS PRO TYR PHE TYR THR VAL SEQRES 26 A 328 VAL LYS ASP HET SO4 A 1 5 HET SO4 A 2 5 HET SO4 A 331 5 HET EDO A 332 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *253(H2 O) HELIX 1 1 PRO A 20 ASP A 25 1 6 HELIX 2 2 TYR A 26 HIS A 29 5 4 HELIX 3 3 ASN A 35 ASP A 37 5 3 HELIX 4 4 LYS A 74 ARG A 89 1 16 HELIX 5 5 ASP A 120 LEU A 128 1 9 HELIX 6 6 THR A 129 MET A 150 1 22 HELIX 7 7 LYS A 158 HIS A 160 5 3 HELIX 8 8 SER A 194 LYS A 198 5 5 HELIX 9 9 GLY A 199 VAL A 204 1 6 HELIX 10 10 TYR A 211 ARG A 228 1 18 HELIX 11 11 ASP A 237 GLY A 250 1 14 HELIX 12 12 GLY A 250 TYR A 261 1 12 HELIX 13 13 ASP A 266 ILE A 272 5 7 HELIX 14 14 ARG A 280 VAL A 285 5 6 HELIX 15 15 ASN A 289 VAL A 293 5 5 HELIX 16 16 SER A 294 LEU A 305 1 12 HELIX 17 17 ASP A 308 ARG A 312 5 5 HELIX 18 18 THR A 314 GLU A 320 1 7 HELIX 19 19 HIS A 321 VAL A 327 5 7 SHEET 1 A 5 TYR A 39 ARG A 47 0 SHEET 2 A 5 SER A 51 ASN A 58 -1 O VAL A 53 N GLY A 46 SHEET 3 A 5 LYS A 64 LEU A 70 -1 O ILE A 69 N GLU A 52 SHEET 4 A 5 PRO A 109 GLU A 114 -1 O LEU A 111 N LYS A 68 SHEET 5 A 5 LEU A 97 LYS A 102 -1 N VAL A 101 O ALA A 110 SHEET 1 B 2 ILE A 152 MET A 153 0 SHEET 2 B 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 C 2 VAL A 162 ASP A 165 0 SHEET 2 C 2 LYS A 170 LEU A 173 -1 O LYS A 170 N ASP A 165 CISPEP 1 GLU A 230 PRO A 231 0 -8.99 SITE 1 AC1 8 ASP A 253 ARG A 278 ARG A 306 TYR A 307 SITE 2 AC1 8 ASP A 308 HOH A 364 HOH A 467 HOH A 521 SITE 1 AC2 5 ARG A 80 ARG A 155 ASN A 189 HOH A 385 SITE 2 AC2 5 HOH A 571 SITE 1 AC3 3 ARG A 191 LYS A 198 ASN A 238 SITE 1 AC4 3 LYS A 49 LYS A 158 HOH A 497 CRYST1 58.686 46.065 63.675 90.00 111.51 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017040 0.000000 0.006716 0.00000 SCALE2 0.000000 0.021708 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016880 0.00000