data_3Q36 # _entry.id 3Q36 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3Q36 pdb_00003q36 10.2210/pdb3q36/pdb RCSB RCSB063135 ? ? WWPDB D_1000063135 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LGB 'Fe-S domain of the yeast DNA primase' unspecified PDB 3L9Q 'human DNA primase P58 iron-sulfur cluster domain' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q36 _pdbx_database_status.recvd_initial_deposition_date 2010-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Agarkar, V.B.' 1 'Babayeva, N.D.' 2 'Tahirov, T.H.' 3 # _citation.id primary _citation.title ;Crystal structure of the C-terminal domain of human DNA primase large subunit: Implications for the mechanism of the primase - polymerase alpha switch. ; _citation.journal_abbrev 'Cell Cycle' _citation.journal_volume 10 _citation.page_first 926 _citation.page_last 931 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1538-4101 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21346410 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Agarkar, V.B.' 1 ? primary 'Babayeva, N.D.' 2 ? primary 'Pavlov, Y.I.' 3 ? primary 'Tahirov, T.H.' 4 ? # _cell.entry_id 3Q36 _cell.length_a 126.476 _cell.length_b 83.724 _cell.length_c 47.561 _cell.angle_alpha 90.00 _cell.angle_beta 97.65 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q36 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA primase large subunit' 22084.326 2 2.7.7.- ? '4Fe-4S cluster domain (UNP residues 266-457)' ? 2 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 2 ? ? ? ? 3 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 4 water nat water 18.015 21 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA primase 58 kDa subunit, p58' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILNG ; _entity_poly.pdbx_seq_one_letter_code_can ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILNG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 VAL n 1 4 GLY n 1 5 LYS n 1 6 ILE n 1 7 SER n 1 8 LEU n 1 9 ASP n 1 10 GLN n 1 11 ILE n 1 12 ASP n 1 13 LEU n 1 14 LEU n 1 15 SER n 1 16 THR n 1 17 LYS n 1 18 SER n 1 19 PHE n 1 20 PRO n 1 21 PRO n 1 22 CYS n 1 23 MET n 1 24 ARG n 1 25 GLN n 1 26 LEU n 1 27 HIS n 1 28 LYS n 1 29 ALA n 1 30 LEU n 1 31 ARG n 1 32 GLU n 1 33 ASN n 1 34 HIS n 1 35 HIS n 1 36 LEU n 1 37 ARG n 1 38 HIS n 1 39 GLY n 1 40 GLY n 1 41 ARG n 1 42 MET n 1 43 GLN n 1 44 TYR n 1 45 GLY n 1 46 LEU n 1 47 PHE n 1 48 LEU n 1 49 LYS n 1 50 GLY n 1 51 ILE n 1 52 GLY n 1 53 LEU n 1 54 THR n 1 55 LEU n 1 56 GLU n 1 57 GLN n 1 58 ALA n 1 59 LEU n 1 60 GLN n 1 61 PHE n 1 62 TRP n 1 63 LYS n 1 64 GLN n 1 65 GLU n 1 66 PHE n 1 67 ILE n 1 68 LYS n 1 69 GLY n 1 70 LYS n 1 71 MET n 1 72 ASP n 1 73 PRO n 1 74 ASP n 1 75 LYS n 1 76 PHE n 1 77 ASP n 1 78 LYS n 1 79 GLY n 1 80 TYR n 1 81 SER n 1 82 TYR n 1 83 ASN n 1 84 ILE n 1 85 ARG n 1 86 HIS n 1 87 SER n 1 88 PHE n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 GLY n 1 93 LYS n 1 94 ARG n 1 95 THR n 1 96 ASP n 1 97 TYR n 1 98 THR n 1 99 PRO n 1 100 PHE n 1 101 SER n 1 102 CYS n 1 103 LEU n 1 104 LYS n 1 105 ILE n 1 106 ILE n 1 107 LEU n 1 108 SER n 1 109 ASN n 1 110 PRO n 1 111 PRO n 1 112 SER n 1 113 GLN n 1 114 GLY n 1 115 ASP n 1 116 TYR n 1 117 HIS n 1 118 GLY n 1 119 CYS n 1 120 PRO n 1 121 PHE n 1 122 ARG n 1 123 HIS n 1 124 SER n 1 125 ASP n 1 126 PRO n 1 127 GLU n 1 128 LEU n 1 129 LEU n 1 130 LYS n 1 131 GLN n 1 132 LYS n 1 133 LEU n 1 134 GLN n 1 135 SER n 1 136 TYR n 1 137 LYS n 1 138 ILE n 1 139 SER n 1 140 PRO n 1 141 GLY n 1 142 GLY n 1 143 ILE n 1 144 SER n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 ASP n 1 149 LEU n 1 150 VAL n 1 151 LYS n 1 152 GLY n 1 153 THR n 1 154 HIS n 1 155 TYR n 1 156 GLN n 1 157 VAL n 1 158 ALA n 1 159 CYS n 1 160 GLN n 1 161 LYS n 1 162 TYR n 1 163 PHE n 1 164 GLU n 1 165 MET n 1 166 ILE n 1 167 HIS n 1 168 ASN n 1 169 VAL n 1 170 ASP n 1 171 ASP n 1 172 CYS n 1 173 GLY n 1 174 PHE n 1 175 SER n 1 176 LEU n 1 177 ASN n 1 178 HIS n 1 179 PRO n 1 180 ASN n 1 181 GLN n 1 182 PHE n 1 183 PHE n 1 184 CYS n 1 185 GLU n 1 186 SER n 1 187 GLN n 1 188 ARG n 1 189 ILE n 1 190 LEU n 1 191 ASN n 1 192 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PRIM2, PRIM2A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRI2_HUMAN _struct_ref.pdbx_db_accession P49643 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILNG ; _struct_ref.pdbx_align_begin 266 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3Q36 A 1 ? 192 ? P49643 266 ? 457 ? 266 457 2 1 3Q36 B 1 ? 192 ? P49643 266 ? 457 ? 266 457 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3Q36 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_percent_sol 56.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;0.2 M magnesium acetate tetrahydrate, 0.05 M sodium cacodylate, 15% w/v PEG8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-03-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97916 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength 0.97916 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3Q36 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.5 _reflns.number_obs 16851 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.6 _reflns.B_iso_Wilson_estimate 37.2 _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.54 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs 0.451 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 839 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3Q36 _refine.ls_number_reflns_obs 16588 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2327525.91 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.16 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 97.1 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.228 _refine.ls_R_factor_R_free 0.250 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 813 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.9 _refine.aniso_B[1][1] 0.36 _refine.aniso_B[2][2] -0.19 _refine.aniso_B[3][3] -0.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.19 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.397363 _refine.solvent_model_param_bsol 43.3513 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3LGB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3Q36 _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.43 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.40 _refine_analyze.Luzzati_sigma_a_free 0.50 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2906 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 21 _refine_hist.number_atoms_total 2944 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 31.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.95 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2520 _refine_ls_shell.R_factor_R_work 0.325 _refine_ls_shell.percent_reflns_obs 93.5 _refine_ls_shell.R_factor_R_free 0.327 _refine_ls_shell.R_factor_R_free_error 0.028 _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2520 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 sf4.par sf4.top 'X-RAY DIFFRACTION' 5 water_rep.param water.top 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3Q36 _struct.title 'Crystal structure of the 4Fe-4S cluster domain of human DNA primase large subunit' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q36 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;pol alpha, primase, DNA replication, polymerase, iron-sulfur cluster, DNA-binding, dna-directed RNA polymerase, metal-binding, nucleotidyltransferase, phosphoprotein, primosome, transcription, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? ASP A 9 ? SER A 272 ASP A 274 5 ? 3 HELX_P HELX_P2 2 GLN A 10 ? SER A 18 ? GLN A 275 SER A 283 1 ? 9 HELX_P HELX_P3 3 PRO A 20 ? HIS A 34 ? PRO A 285 HIS A 299 1 ? 15 HELX_P HELX_P4 4 ARG A 37 ? ILE A 51 ? ARG A 302 ILE A 316 1 ? 15 HELX_P HELX_P5 5 THR A 54 ? LYS A 68 ? THR A 319 LYS A 333 1 ? 15 HELX_P HELX_P6 6 ASP A 72 ? TYR A 80 ? ASP A 337 TYR A 345 1 ? 9 HELX_P HELX_P7 7 TYR A 80 ? PHE A 88 ? TYR A 345 PHE A 353 1 ? 9 HELX_P HELX_P8 8 SER A 101 ? SER A 108 ? SER A 366 SER A 373 1 ? 8 HELX_P HELX_P9 9 CYS A 119 ? SER A 124 ? CYS A 384 SER A 389 1 ? 6 HELX_P HELX_P10 10 ASP A 125 ? TYR A 136 ? ASP A 390 TYR A 401 1 ? 12 HELX_P HELX_P11 11 SER A 139 ? GLY A 152 ? SER A 404 GLY A 417 1 ? 14 HELX_P HELX_P12 12 HIS A 154 ? ASN A 168 ? HIS A 419 ASN A 433 1 ? 15 HELX_P HELX_P13 13 HIS A 178 ? ARG A 188 ? HIS A 443 ARG A 453 1 ? 11 HELX_P HELX_P14 14 GLN B 10 ? SER B 18 ? GLN B 275 SER B 283 1 ? 9 HELX_P HELX_P15 15 PRO B 20 ? HIS B 34 ? PRO B 285 HIS B 299 1 ? 15 HELX_P HELX_P16 16 ARG B 37 ? ILE B 51 ? ARG B 302 ILE B 316 1 ? 15 HELX_P HELX_P17 17 THR B 54 ? ILE B 67 ? THR B 319 ILE B 332 1 ? 14 HELX_P HELX_P18 18 ASP B 72 ? TYR B 80 ? ASP B 337 TYR B 345 1 ? 9 HELX_P HELX_P19 19 TYR B 80 ? PHE B 88 ? TYR B 345 PHE B 353 1 ? 9 HELX_P HELX_P20 20 SER B 101 ? SER B 108 ? SER B 366 SER B 373 1 ? 8 HELX_P HELX_P21 21 CYS B 119 ? SER B 124 ? CYS B 384 SER B 389 1 ? 6 HELX_P HELX_P22 22 ASP B 125 ? TYR B 136 ? ASP B 390 TYR B 401 1 ? 12 HELX_P HELX_P23 23 SER B 139 ? GLY B 152 ? SER B 404 GLY B 417 1 ? 14 HELX_P HELX_P24 24 HIS B 154 ? ASN B 168 ? HIS B 419 ASN B 433 1 ? 15 HELX_P HELX_P25 25 HIS B 178 ? LEU B 190 ? HIS B 443 LEU B 455 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 22 SG ? ? ? 1_555 C SF4 . FE4 ? ? A CYS 287 A SF4 458 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc2 metalc ? ? A CYS 102 SG ? ? ? 1_555 C SF4 . FE1 ? ? A CYS 367 A SF4 458 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc3 metalc ? ? A CYS 119 SG ? ? ? 1_555 C SF4 . FE2 ? ? A CYS 384 A SF4 458 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc4 metalc ? ? A CYS 159 SG ? ? ? 1_555 C SF4 . FE3 ? ? A CYS 424 A SF4 458 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc5 metalc ? ? B CYS 22 SG ? ? ? 1_555 D SF4 . FE4 ? ? B CYS 287 B SF4 458 1_555 ? ? ? ? ? ? ? 2.279 ? ? metalc6 metalc ? ? B CYS 102 SG ? ? ? 1_555 D SF4 . FE1 ? ? B CYS 367 B SF4 458 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc7 metalc ? ? B CYS 119 SG ? ? ? 1_555 D SF4 . FE2 ? ? B CYS 384 B SF4 458 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc8 metalc ? ? B CYS 159 SG ? ? ? 1_555 D SF4 . FE3 ? ? B CYS 424 B SF4 458 1_555 ? ? ? ? ? ? ? 2.121 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 458 ? 5 'BINDING SITE FOR RESIDUE SF4 A 458' AC2 Software B SF4 458 ? 5 'BINDING SITE FOR RESIDUE SF4 B 458' AC3 Software B FE 1 ? 1 'BINDING SITE FOR RESIDUE FE B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PRO A 20 ? PRO A 285 . ? 1_555 ? 2 AC1 5 CYS A 22 ? CYS A 287 . ? 1_555 ? 3 AC1 5 CYS A 102 ? CYS A 367 . ? 1_555 ? 4 AC1 5 CYS A 119 ? CYS A 384 . ? 1_555 ? 5 AC1 5 CYS A 159 ? CYS A 424 . ? 1_555 ? 6 AC2 5 PRO B 20 ? PRO B 285 . ? 1_555 ? 7 AC2 5 CYS B 22 ? CYS B 287 . ? 1_555 ? 8 AC2 5 CYS B 102 ? CYS B 367 . ? 1_555 ? 9 AC2 5 CYS B 119 ? CYS B 384 . ? 1_555 ? 10 AC2 5 CYS B 159 ? CYS B 424 . ? 1_555 ? 11 AC3 1 HOH F . ? HOH A 14 . ? 3_455 ? # _database_PDB_matrix.entry_id 3Q36 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3Q36 _atom_sites.fract_transf_matrix[1][1] 0.007907 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001062 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011944 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021215 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 266 ? ? ? A . n A 1 2 ASN 2 267 ? ? ? A . n A 1 3 VAL 3 268 ? ? ? A . n A 1 4 GLY 4 269 ? ? ? A . n A 1 5 LYS 5 270 ? ? ? A . n A 1 6 ILE 6 271 271 ILE ILE A . n A 1 7 SER 7 272 272 SER SER A . n A 1 8 LEU 8 273 273 LEU LEU A . n A 1 9 ASP 9 274 274 ASP ASP A . n A 1 10 GLN 10 275 275 GLN GLN A . n A 1 11 ILE 11 276 276 ILE ILE A . n A 1 12 ASP 12 277 277 ASP ASP A . n A 1 13 LEU 13 278 278 LEU LEU A . n A 1 14 LEU 14 279 279 LEU LEU A . n A 1 15 SER 15 280 280 SER SER A . n A 1 16 THR 16 281 281 THR THR A . n A 1 17 LYS 17 282 282 LYS LYS A . n A 1 18 SER 18 283 283 SER SER A . n A 1 19 PHE 19 284 284 PHE PHE A . n A 1 20 PRO 20 285 285 PRO PRO A . n A 1 21 PRO 21 286 286 PRO PRO A . n A 1 22 CYS 22 287 287 CYS CYS A . n A 1 23 MET 23 288 288 MET MET A . n A 1 24 ARG 24 289 289 ARG ARG A . n A 1 25 GLN 25 290 290 GLN GLN A . n A 1 26 LEU 26 291 291 LEU LEU A . n A 1 27 HIS 27 292 292 HIS HIS A . n A 1 28 LYS 28 293 293 LYS LYS A . n A 1 29 ALA 29 294 294 ALA ALA A . n A 1 30 LEU 30 295 295 LEU LEU A . n A 1 31 ARG 31 296 296 ARG ARG A . n A 1 32 GLU 32 297 297 GLU GLU A . n A 1 33 ASN 33 298 298 ASN ASN A . n A 1 34 HIS 34 299 299 HIS HIS A . n A 1 35 HIS 35 300 300 HIS HIS A . n A 1 36 LEU 36 301 301 LEU LEU A . n A 1 37 ARG 37 302 302 ARG ARG A . n A 1 38 HIS 38 303 303 HIS HIS A . n A 1 39 GLY 39 304 304 GLY GLY A . n A 1 40 GLY 40 305 305 GLY GLY A . n A 1 41 ARG 41 306 306 ARG ARG A . n A 1 42 MET 42 307 307 MET MET A . n A 1 43 GLN 43 308 308 GLN GLN A . n A 1 44 TYR 44 309 309 TYR TYR A . n A 1 45 GLY 45 310 310 GLY GLY A . n A 1 46 LEU 46 311 311 LEU LEU A . n A 1 47 PHE 47 312 312 PHE PHE A . n A 1 48 LEU 48 313 313 LEU LEU A . n A 1 49 LYS 49 314 314 LYS LYS A . n A 1 50 GLY 50 315 315 GLY GLY A . n A 1 51 ILE 51 316 316 ILE ILE A . n A 1 52 GLY 52 317 317 GLY GLY A . n A 1 53 LEU 53 318 318 LEU LEU A . n A 1 54 THR 54 319 319 THR THR A . n A 1 55 LEU 55 320 320 LEU LEU A . n A 1 56 GLU 56 321 321 GLU GLU A . n A 1 57 GLN 57 322 322 GLN GLN A . n A 1 58 ALA 58 323 323 ALA ALA A . n A 1 59 LEU 59 324 324 LEU LEU A . n A 1 60 GLN 60 325 325 GLN GLN A . n A 1 61 PHE 61 326 326 PHE PHE A . n A 1 62 TRP 62 327 327 TRP TRP A . n A 1 63 LYS 63 328 328 LYS LYS A . n A 1 64 GLN 64 329 329 GLN GLN A . n A 1 65 GLU 65 330 330 GLU GLU A . n A 1 66 PHE 66 331 331 PHE PHE A . n A 1 67 ILE 67 332 332 ILE ILE A . n A 1 68 LYS 68 333 333 LYS LYS A . n A 1 69 GLY 69 334 334 GLY GLY A . n A 1 70 LYS 70 335 335 LYS LYS A . n A 1 71 MET 71 336 336 MET MET A . n A 1 72 ASP 72 337 337 ASP ASP A . n A 1 73 PRO 73 338 338 PRO PRO A . n A 1 74 ASP 74 339 339 ASP ASP A . n A 1 75 LYS 75 340 340 LYS LYS A . n A 1 76 PHE 76 341 341 PHE PHE A . n A 1 77 ASP 77 342 342 ASP ASP A . n A 1 78 LYS 78 343 343 LYS LYS A . n A 1 79 GLY 79 344 344 GLY GLY A . n A 1 80 TYR 80 345 345 TYR TYR A . n A 1 81 SER 81 346 346 SER SER A . n A 1 82 TYR 82 347 347 TYR TYR A . n A 1 83 ASN 83 348 348 ASN ASN A . n A 1 84 ILE 84 349 349 ILE ILE A . n A 1 85 ARG 85 350 350 ARG ARG A . n A 1 86 HIS 86 351 351 HIS HIS A . n A 1 87 SER 87 352 352 SER SER A . n A 1 88 PHE 88 353 353 PHE PHE A . n A 1 89 GLY 89 354 354 GLY GLY A . n A 1 90 LYS 90 355 ? ? ? A . n A 1 91 GLU 91 356 ? ? ? A . n A 1 92 GLY 92 357 ? ? ? A . n A 1 93 LYS 93 358 ? ? ? A . n A 1 94 ARG 94 359 ? ? ? A . n A 1 95 THR 95 360 ? ? ? A . n A 1 96 ASP 96 361 ? ? ? A . n A 1 97 TYR 97 362 362 TYR TYR A . n A 1 98 THR 98 363 363 THR THR A . n A 1 99 PRO 99 364 364 PRO PRO A . n A 1 100 PHE 100 365 365 PHE PHE A . n A 1 101 SER 101 366 366 SER SER A . n A 1 102 CYS 102 367 367 CYS CYS A . n A 1 103 LEU 103 368 368 LEU LEU A . n A 1 104 LYS 104 369 369 LYS LYS A . n A 1 105 ILE 105 370 370 ILE ILE A . n A 1 106 ILE 106 371 371 ILE ILE A . n A 1 107 LEU 107 372 372 LEU LEU A . n A 1 108 SER 108 373 373 SER SER A . n A 1 109 ASN 109 374 374 ASN ASN A . n A 1 110 PRO 110 375 375 PRO PRO A . n A 1 111 PRO 111 376 376 PRO PRO A . n A 1 112 SER 112 377 377 SER SER A . n A 1 113 GLN 113 378 378 GLN GLN A . n A 1 114 GLY 114 379 379 GLY GLY A . n A 1 115 ASP 115 380 380 ASP ASP A . n A 1 116 TYR 116 381 381 TYR TYR A . n A 1 117 HIS 117 382 382 HIS HIS A . n A 1 118 GLY 118 383 383 GLY GLY A . n A 1 119 CYS 119 384 384 CYS CYS A . n A 1 120 PRO 120 385 385 PRO PRO A . n A 1 121 PHE 121 386 386 PHE PHE A . n A 1 122 ARG 122 387 387 ARG ARG A . n A 1 123 HIS 123 388 388 HIS HIS A . n A 1 124 SER 124 389 389 SER SER A . n A 1 125 ASP 125 390 390 ASP ASP A . n A 1 126 PRO 126 391 391 PRO PRO A . n A 1 127 GLU 127 392 392 GLU GLU A . n A 1 128 LEU 128 393 393 LEU LEU A . n A 1 129 LEU 129 394 394 LEU LEU A . n A 1 130 LYS 130 395 395 LYS LYS A . n A 1 131 GLN 131 396 396 GLN GLN A . n A 1 132 LYS 132 397 397 LYS LYS A . n A 1 133 LEU 133 398 398 LEU LEU A . n A 1 134 GLN 134 399 399 GLN GLN A . n A 1 135 SER 135 400 400 SER SER A . n A 1 136 TYR 136 401 401 TYR TYR A . n A 1 137 LYS 137 402 402 LYS LYS A . n A 1 138 ILE 138 403 403 ILE ILE A . n A 1 139 SER 139 404 404 SER SER A . n A 1 140 PRO 140 405 405 PRO PRO A . n A 1 141 GLY 141 406 406 GLY GLY A . n A 1 142 GLY 142 407 407 GLY GLY A . n A 1 143 ILE 143 408 408 ILE ILE A . n A 1 144 SER 144 409 409 SER SER A . n A 1 145 GLN 145 410 410 GLN GLN A . n A 1 146 ILE 146 411 411 ILE ILE A . n A 1 147 LEU 147 412 412 LEU LEU A . n A 1 148 ASP 148 413 413 ASP ASP A . n A 1 149 LEU 149 414 414 LEU LEU A . n A 1 150 VAL 150 415 415 VAL VAL A . n A 1 151 LYS 151 416 416 LYS LYS A . n A 1 152 GLY 152 417 417 GLY GLY A . n A 1 153 THR 153 418 418 THR THR A . n A 1 154 HIS 154 419 419 HIS HIS A . n A 1 155 TYR 155 420 420 TYR TYR A . n A 1 156 GLN 156 421 421 GLN GLN A . n A 1 157 VAL 157 422 422 VAL VAL A . n A 1 158 ALA 158 423 423 ALA ALA A . n A 1 159 CYS 159 424 424 CYS CYS A . n A 1 160 GLN 160 425 425 GLN GLN A . n A 1 161 LYS 161 426 426 LYS LYS A . n A 1 162 TYR 162 427 427 TYR TYR A . n A 1 163 PHE 163 428 428 PHE PHE A . n A 1 164 GLU 164 429 429 GLU GLU A . n A 1 165 MET 165 430 430 MET MET A . n A 1 166 ILE 166 431 431 ILE ILE A . n A 1 167 HIS 167 432 432 HIS HIS A . n A 1 168 ASN 168 433 433 ASN ASN A . n A 1 169 VAL 169 434 434 VAL VAL A . n A 1 170 ASP 170 435 435 ASP ASP A . n A 1 171 ASP 171 436 436 ASP ASP A . n A 1 172 CYS 172 437 437 CYS CYS A . n A 1 173 GLY 173 438 438 GLY GLY A . n A 1 174 PHE 174 439 439 PHE PHE A . n A 1 175 SER 175 440 440 SER SER A . n A 1 176 LEU 176 441 441 LEU LEU A . n A 1 177 ASN 177 442 442 ASN ASN A . n A 1 178 HIS 178 443 443 HIS HIS A . n A 1 179 PRO 179 444 444 PRO PRO A . n A 1 180 ASN 180 445 445 ASN ASN A . n A 1 181 GLN 181 446 446 GLN GLN A . n A 1 182 PHE 182 447 447 PHE PHE A . n A 1 183 PHE 183 448 448 PHE PHE A . n A 1 184 CYS 184 449 449 CYS CYS A . n A 1 185 GLU 185 450 450 GLU GLU A . n A 1 186 SER 186 451 451 SER SER A . n A 1 187 GLN 187 452 452 GLN GLN A . n A 1 188 ARG 188 453 453 ARG ARG A . n A 1 189 ILE 189 454 454 ILE ILE A . n A 1 190 LEU 190 455 455 LEU LEU A . n A 1 191 ASN 191 456 ? ? ? A . n A 1 192 GLY 192 457 ? ? ? A . n B 1 1 GLY 1 266 ? ? ? B . n B 1 2 ASN 2 267 ? ? ? B . n B 1 3 VAL 3 268 ? ? ? B . n B 1 4 GLY 4 269 ? ? ? B . n B 1 5 LYS 5 270 ? ? ? B . n B 1 6 ILE 6 271 271 ILE ILE B . n B 1 7 SER 7 272 272 SER SER B . n B 1 8 LEU 8 273 273 LEU LEU B . n B 1 9 ASP 9 274 274 ASP ASP B . n B 1 10 GLN 10 275 275 GLN GLN B . n B 1 11 ILE 11 276 276 ILE ILE B . n B 1 12 ASP 12 277 277 ASP ASP B . n B 1 13 LEU 13 278 278 LEU LEU B . n B 1 14 LEU 14 279 279 LEU LEU B . n B 1 15 SER 15 280 280 SER SER B . n B 1 16 THR 16 281 281 THR THR B . n B 1 17 LYS 17 282 282 LYS LYS B . n B 1 18 SER 18 283 283 SER SER B . n B 1 19 PHE 19 284 284 PHE PHE B . n B 1 20 PRO 20 285 285 PRO PRO B . n B 1 21 PRO 21 286 286 PRO PRO B . n B 1 22 CYS 22 287 287 CYS CYS B . n B 1 23 MET 23 288 288 MET MET B . n B 1 24 ARG 24 289 289 ARG ARG B . n B 1 25 GLN 25 290 290 GLN GLN B . n B 1 26 LEU 26 291 291 LEU LEU B . n B 1 27 HIS 27 292 292 HIS HIS B . n B 1 28 LYS 28 293 293 LYS LYS B . n B 1 29 ALA 29 294 294 ALA ALA B . n B 1 30 LEU 30 295 295 LEU LEU B . n B 1 31 ARG 31 296 296 ARG ARG B . n B 1 32 GLU 32 297 297 GLU GLU B . n B 1 33 ASN 33 298 298 ASN ASN B . n B 1 34 HIS 34 299 299 HIS HIS B . n B 1 35 HIS 35 300 300 HIS HIS B . n B 1 36 LEU 36 301 301 LEU LEU B . n B 1 37 ARG 37 302 302 ARG ARG B . n B 1 38 HIS 38 303 303 HIS HIS B . n B 1 39 GLY 39 304 304 GLY GLY B . n B 1 40 GLY 40 305 305 GLY GLY B . n B 1 41 ARG 41 306 306 ARG ARG B . n B 1 42 MET 42 307 307 MET MET B . n B 1 43 GLN 43 308 308 GLN GLN B . n B 1 44 TYR 44 309 309 TYR TYR B . n B 1 45 GLY 45 310 310 GLY GLY B . n B 1 46 LEU 46 311 311 LEU LEU B . n B 1 47 PHE 47 312 312 PHE PHE B . n B 1 48 LEU 48 313 313 LEU LEU B . n B 1 49 LYS 49 314 314 LYS LYS B . n B 1 50 GLY 50 315 315 GLY GLY B . n B 1 51 ILE 51 316 316 ILE ILE B . n B 1 52 GLY 52 317 317 GLY GLY B . n B 1 53 LEU 53 318 318 LEU LEU B . n B 1 54 THR 54 319 319 THR THR B . n B 1 55 LEU 55 320 320 LEU LEU B . n B 1 56 GLU 56 321 321 GLU GLU B . n B 1 57 GLN 57 322 322 GLN GLN B . n B 1 58 ALA 58 323 323 ALA ALA B . n B 1 59 LEU 59 324 324 LEU LEU B . n B 1 60 GLN 60 325 325 GLN GLN B . n B 1 61 PHE 61 326 326 PHE PHE B . n B 1 62 TRP 62 327 327 TRP TRP B . n B 1 63 LYS 63 328 328 LYS LYS B . n B 1 64 GLN 64 329 329 GLN GLN B . n B 1 65 GLU 65 330 330 GLU GLU B . n B 1 66 PHE 66 331 331 PHE PHE B . n B 1 67 ILE 67 332 332 ILE ILE B . n B 1 68 LYS 68 333 333 LYS LYS B . n B 1 69 GLY 69 334 334 GLY GLY B . n B 1 70 LYS 70 335 335 LYS LYS B . n B 1 71 MET 71 336 336 MET MET B . n B 1 72 ASP 72 337 337 ASP ASP B . n B 1 73 PRO 73 338 338 PRO PRO B . n B 1 74 ASP 74 339 339 ASP ASP B . n B 1 75 LYS 75 340 340 LYS LYS B . n B 1 76 PHE 76 341 341 PHE PHE B . n B 1 77 ASP 77 342 342 ASP ASP B . n B 1 78 LYS 78 343 343 LYS LYS B . n B 1 79 GLY 79 344 344 GLY GLY B . n B 1 80 TYR 80 345 345 TYR TYR B . n B 1 81 SER 81 346 346 SER SER B . n B 1 82 TYR 82 347 347 TYR TYR B . n B 1 83 ASN 83 348 348 ASN ASN B . n B 1 84 ILE 84 349 349 ILE ILE B . n B 1 85 ARG 85 350 350 ARG ARG B . n B 1 86 HIS 86 351 351 HIS HIS B . n B 1 87 SER 87 352 352 SER SER B . n B 1 88 PHE 88 353 353 PHE PHE B . n B 1 89 GLY 89 354 ? ? ? B . n B 1 90 LYS 90 355 ? ? ? B . n B 1 91 GLU 91 356 ? ? ? B . n B 1 92 GLY 92 357 ? ? ? B . n B 1 93 LYS 93 358 ? ? ? B . n B 1 94 ARG 94 359 ? ? ? B . n B 1 95 THR 95 360 ? ? ? B . n B 1 96 ASP 96 361 361 ASP ASP B . n B 1 97 TYR 97 362 362 TYR TYR B . n B 1 98 THR 98 363 363 THR THR B . n B 1 99 PRO 99 364 364 PRO PRO B . n B 1 100 PHE 100 365 365 PHE PHE B . n B 1 101 SER 101 366 366 SER SER B . n B 1 102 CYS 102 367 367 CYS CYS B . n B 1 103 LEU 103 368 368 LEU LEU B . n B 1 104 LYS 104 369 369 LYS LYS B . n B 1 105 ILE 105 370 370 ILE ILE B . n B 1 106 ILE 106 371 371 ILE ILE B . n B 1 107 LEU 107 372 372 LEU LEU B . n B 1 108 SER 108 373 373 SER SER B . n B 1 109 ASN 109 374 374 ASN ASN B . n B 1 110 PRO 110 375 375 PRO PRO B . n B 1 111 PRO 111 376 376 PRO PRO B . n B 1 112 SER 112 377 377 SER SER B . n B 1 113 GLN 113 378 378 GLN GLN B . n B 1 114 GLY 114 379 379 GLY GLY B . n B 1 115 ASP 115 380 380 ASP ASP B . n B 1 116 TYR 116 381 381 TYR TYR B . n B 1 117 HIS 117 382 382 HIS HIS B . n B 1 118 GLY 118 383 383 GLY GLY B . n B 1 119 CYS 119 384 384 CYS CYS B . n B 1 120 PRO 120 385 385 PRO PRO B . n B 1 121 PHE 121 386 386 PHE PHE B . n B 1 122 ARG 122 387 387 ARG ARG B . n B 1 123 HIS 123 388 388 HIS HIS B . n B 1 124 SER 124 389 389 SER SER B . n B 1 125 ASP 125 390 390 ASP ASP B . n B 1 126 PRO 126 391 391 PRO PRO B . n B 1 127 GLU 127 392 392 GLU GLU B . n B 1 128 LEU 128 393 393 LEU LEU B . n B 1 129 LEU 129 394 394 LEU LEU B . n B 1 130 LYS 130 395 395 LYS LYS B . n B 1 131 GLN 131 396 396 GLN GLN B . n B 1 132 LYS 132 397 397 LYS LYS B . n B 1 133 LEU 133 398 398 LEU LEU B . n B 1 134 GLN 134 399 399 GLN GLN B . n B 1 135 SER 135 400 400 SER SER B . n B 1 136 TYR 136 401 401 TYR TYR B . n B 1 137 LYS 137 402 402 LYS LYS B . n B 1 138 ILE 138 403 403 ILE ILE B . n B 1 139 SER 139 404 404 SER SER B . n B 1 140 PRO 140 405 405 PRO PRO B . n B 1 141 GLY 141 406 406 GLY GLY B . n B 1 142 GLY 142 407 407 GLY GLY B . n B 1 143 ILE 143 408 408 ILE ILE B . n B 1 144 SER 144 409 409 SER SER B . n B 1 145 GLN 145 410 410 GLN GLN B . n B 1 146 ILE 146 411 411 ILE ILE B . n B 1 147 LEU 147 412 412 LEU LEU B . n B 1 148 ASP 148 413 413 ASP ASP B . n B 1 149 LEU 149 414 414 LEU LEU B . n B 1 150 VAL 150 415 415 VAL VAL B . n B 1 151 LYS 151 416 416 LYS LYS B . n B 1 152 GLY 152 417 417 GLY GLY B . n B 1 153 THR 153 418 418 THR THR B . n B 1 154 HIS 154 419 419 HIS HIS B . n B 1 155 TYR 155 420 420 TYR TYR B . n B 1 156 GLN 156 421 421 GLN GLN B . n B 1 157 VAL 157 422 422 VAL VAL B . n B 1 158 ALA 158 423 423 ALA ALA B . n B 1 159 CYS 159 424 424 CYS CYS B . n B 1 160 GLN 160 425 425 GLN GLN B . n B 1 161 LYS 161 426 426 LYS LYS B . n B 1 162 TYR 162 427 427 TYR TYR B . n B 1 163 PHE 163 428 428 PHE PHE B . n B 1 164 GLU 164 429 429 GLU GLU B . n B 1 165 MET 165 430 430 MET MET B . n B 1 166 ILE 166 431 431 ILE ILE B . n B 1 167 HIS 167 432 432 HIS HIS B . n B 1 168 ASN 168 433 433 ASN ASN B . n B 1 169 VAL 169 434 434 VAL VAL B . n B 1 170 ASP 170 435 435 ASP ASP B . n B 1 171 ASP 171 436 436 ASP ASP B . n B 1 172 CYS 172 437 437 CYS CYS B . n B 1 173 GLY 173 438 438 GLY GLY B . n B 1 174 PHE 174 439 439 PHE PHE B . n B 1 175 SER 175 440 440 SER SER B . n B 1 176 LEU 176 441 441 LEU LEU B . n B 1 177 ASN 177 442 442 ASN ASN B . n B 1 178 HIS 178 443 443 HIS HIS B . n B 1 179 PRO 179 444 444 PRO PRO B . n B 1 180 ASN 180 445 445 ASN ASN B . n B 1 181 GLN 181 446 446 GLN GLN B . n B 1 182 PHE 182 447 447 PHE PHE B . n B 1 183 PHE 183 448 448 PHE PHE B . n B 1 184 CYS 184 449 449 CYS CYS B . n B 1 185 GLU 185 450 450 GLU GLU B . n B 1 186 SER 186 451 451 SER SER B . n B 1 187 GLN 187 452 452 GLN GLN B . n B 1 188 ARG 188 453 453 ARG ARG B . n B 1 189 ILE 189 454 454 ILE ILE B . n B 1 190 LEU 190 455 455 LEU LEU B . n B 1 191 ASN 191 456 ? ? ? B . n B 1 192 GLY 192 457 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 1 458 456 SF4 SF4 A . D 2 SF4 1 458 456 SF4 SF4 B . E 3 FE 1 1 1 FE FE B . F 4 HOH 1 1 1 HOH HOH A . F 4 HOH 2 2 2 HOH HOH A . F 4 HOH 3 4 4 HOH HOH A . F 4 HOH 4 5 5 HOH HOH A . F 4 HOH 5 9 9 HOH HOH A . F 4 HOH 6 11 11 HOH HOH A . F 4 HOH 7 13 13 HOH HOH A . F 4 HOH 8 14 14 HOH HOH A . F 4 HOH 9 16 16 HOH HOH A . F 4 HOH 10 17 17 HOH HOH A . F 4 HOH 11 18 18 HOH HOH A . F 4 HOH 12 19 19 HOH HOH A . F 4 HOH 13 20 20 HOH HOH A . F 4 HOH 14 21 21 HOH HOH A . G 4 HOH 1 3 3 HOH HOH B . G 4 HOH 2 6 6 HOH HOH B . G 4 HOH 3 7 7 HOH HOH B . G 4 HOH 4 8 8 HOH HOH B . G 4 HOH 5 10 10 HOH HOH B . G 4 HOH 6 12 12 HOH HOH B . G 4 HOH 7 15 15 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S1 ? C SF4 . ? A SF4 458 ? 1_555 110.6 ? 2 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S2 ? C SF4 . ? A SF4 458 ? 1_555 133.5 ? 3 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S2 ? C SF4 . ? A SF4 458 ? 1_555 87.5 ? 4 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 128.5 ? 5 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 90.1 ? 6 S2 ? C SF4 . ? A SF4 458 ? 1_555 FE4 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 92.2 ? 7 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S2 ? C SF4 . ? A SF4 458 ? 1_555 111.9 ? 8 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 126.9 ? 9 S2 ? C SF4 . ? A SF4 458 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 87.7 ? 10 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 130.6 ? 11 S2 ? C SF4 . ? A SF4 458 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 92.2 ? 12 S3 ? C SF4 . ? A SF4 458 ? 1_555 FE1 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 95.0 ? 13 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S1 ? C SF4 . ? A SF4 458 ? 1_555 127.2 ? 14 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 118.1 ? 15 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S3 ? C SF4 . ? A SF4 458 ? 1_555 85.8 ? 16 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 128.9 ? 17 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 90.1 ? 18 S3 ? C SF4 . ? A SF4 458 ? 1_555 FE2 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 95.2 ? 19 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S1 ? C SF4 . ? A SF4 458 ? 1_555 129.2 ? 20 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S2 ? C SF4 . ? A SF4 458 ? 1_555 126.7 ? 21 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S2 ? C SF4 . ? A SF4 458 ? 1_555 84.2 ? 22 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 119.1 ? 23 S1 ? C SF4 . ? A SF4 458 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 92.8 ? 24 S2 ? C SF4 . ? A SF4 458 ? 1_555 FE3 ? C SF4 . ? A SF4 458 ? 1_555 S4 ? C SF4 . ? A SF4 458 ? 1_555 94.6 ? 25 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S1 ? D SF4 . ? B SF4 458 ? 1_555 119.5 ? 26 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S2 ? D SF4 . ? B SF4 458 ? 1_555 139.8 ? 27 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S2 ? D SF4 . ? B SF4 458 ? 1_555 84.6 ? 28 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 118.6 ? 29 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 89.8 ? 30 S2 ? D SF4 . ? B SF4 458 ? 1_555 FE4 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 90.9 ? 31 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S2 ? D SF4 . ? B SF4 458 ? 1_555 111.9 ? 32 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 130.8 ? 33 S2 ? D SF4 . ? B SF4 458 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 87.2 ? 34 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 125.0 ? 35 S2 ? D SF4 . ? B SF4 458 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 92.7 ? 36 S3 ? D SF4 . ? B SF4 458 ? 1_555 FE1 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 97.2 ? 37 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S1 ? D SF4 . ? B SF4 458 ? 1_555 132.2 ? 38 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 117.9 ? 39 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S3 ? D SF4 . ? B SF4 458 ? 1_555 85.9 ? 40 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 122.3 ? 41 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 91.5 ? 42 S3 ? D SF4 . ? B SF4 458 ? 1_555 FE2 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 97.2 ? 43 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S1 ? D SF4 . ? B SF4 458 ? 1_555 125.9 ? 44 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S2 ? D SF4 . ? B SF4 458 ? 1_555 124.3 ? 45 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S2 ? D SF4 . ? B SF4 458 ? 1_555 82.7 ? 46 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 126.0 ? 47 S1 ? D SF4 . ? B SF4 458 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 92.3 ? 48 S2 ? D SF4 . ? B SF4 458 ? 1_555 FE3 ? D SF4 . ? B SF4 458 ? 1_555 S4 ? D SF4 . ? B SF4 458 ? 1_555 93.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.value' 15 3 'Structure model' '_struct_conn.pdbx_dist_value' 16 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 345 ? ? -130.67 -59.79 2 1 ASN A 374 ? ? 33.70 70.69 3 1 PHE A 439 ? ? -174.22 146.88 4 1 ASN A 442 ? ? -156.17 3.19 5 1 ILE B 276 ? ? -30.21 -38.17 6 1 HIS B 299 ? ? 41.56 29.66 7 1 TYR B 345 ? ? -140.62 -36.60 8 1 TYR B 362 ? ? -102.20 71.66 9 1 SER B 377 ? ? -106.03 -167.10 10 1 ASN B 433 ? ? 59.12 70.51 11 1 ASP B 436 ? ? -174.57 107.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 266 ? A GLY 1 2 1 Y 1 A ASN 267 ? A ASN 2 3 1 Y 1 A VAL 268 ? A VAL 3 4 1 Y 1 A GLY 269 ? A GLY 4 5 1 Y 1 A LYS 270 ? A LYS 5 6 1 Y 1 A LYS 355 ? A LYS 90 7 1 Y 1 A GLU 356 ? A GLU 91 8 1 Y 1 A GLY 357 ? A GLY 92 9 1 Y 1 A LYS 358 ? A LYS 93 10 1 Y 1 A ARG 359 ? A ARG 94 11 1 Y 1 A THR 360 ? A THR 95 12 1 Y 1 A ASP 361 ? A ASP 96 13 1 Y 1 A ASN 456 ? A ASN 191 14 1 Y 1 A GLY 457 ? A GLY 192 15 1 Y 1 B GLY 266 ? B GLY 1 16 1 Y 1 B ASN 267 ? B ASN 2 17 1 Y 1 B VAL 268 ? B VAL 3 18 1 Y 1 B GLY 269 ? B GLY 4 19 1 Y 1 B LYS 270 ? B LYS 5 20 1 Y 1 B GLY 354 ? B GLY 89 21 1 Y 1 B LYS 355 ? B LYS 90 22 1 Y 1 B GLU 356 ? B GLU 91 23 1 Y 1 B GLY 357 ? B GLY 92 24 1 Y 1 B LYS 358 ? B LYS 93 25 1 Y 1 B ARG 359 ? B ARG 94 26 1 Y 1 B THR 360 ? B THR 95 27 1 Y 1 B ASN 456 ? B ASN 191 28 1 Y 1 B GLY 457 ? B GLY 192 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FE FE FE N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 SF4 FE1 FE N N 305 SF4 FE2 FE N N 306 SF4 FE3 FE N N 307 SF4 FE4 FE N N 308 SF4 S1 S N N 309 SF4 S2 S N N 310 SF4 S3 S N N 311 SF4 S4 S N N 312 THR N N N N 313 THR CA C N S 314 THR C C N N 315 THR O O N N 316 THR CB C N R 317 THR OG1 O N N 318 THR CG2 C N N 319 THR OXT O N N 320 THR H H N N 321 THR H2 H N N 322 THR HA H N N 323 THR HB H N N 324 THR HG1 H N N 325 THR HG21 H N N 326 THR HG22 H N N 327 THR HG23 H N N 328 THR HXT H N N 329 TRP N N N N 330 TRP CA C N S 331 TRP C C N N 332 TRP O O N N 333 TRP CB C N N 334 TRP CG C Y N 335 TRP CD1 C Y N 336 TRP CD2 C Y N 337 TRP NE1 N Y N 338 TRP CE2 C Y N 339 TRP CE3 C Y N 340 TRP CZ2 C Y N 341 TRP CZ3 C Y N 342 TRP CH2 C Y N 343 TRP OXT O N N 344 TRP H H N N 345 TRP H2 H N N 346 TRP HA H N N 347 TRP HB2 H N N 348 TRP HB3 H N N 349 TRP HD1 H N N 350 TRP HE1 H N N 351 TRP HE3 H N N 352 TRP HZ2 H N N 353 TRP HZ3 H N N 354 TRP HH2 H N N 355 TRP HXT H N N 356 TYR N N N N 357 TYR CA C N S 358 TYR C C N N 359 TYR O O N N 360 TYR CB C N N 361 TYR CG C Y N 362 TYR CD1 C Y N 363 TYR CD2 C Y N 364 TYR CE1 C Y N 365 TYR CE2 C Y N 366 TYR CZ C Y N 367 TYR OH O N N 368 TYR OXT O N N 369 TYR H H N N 370 TYR H2 H N N 371 TYR HA H N N 372 TYR HB2 H N N 373 TYR HB3 H N N 374 TYR HD1 H N N 375 TYR HD2 H N N 376 TYR HE1 H N N 377 TYR HE2 H N N 378 TYR HH H N N 379 TYR HXT H N N 380 VAL N N N N 381 VAL CA C N S 382 VAL C C N N 383 VAL O O N N 384 VAL CB C N N 385 VAL CG1 C N N 386 VAL CG2 C N N 387 VAL OXT O N N 388 VAL H H N N 389 VAL H2 H N N 390 VAL HA H N N 391 VAL HB H N N 392 VAL HG11 H N N 393 VAL HG12 H N N 394 VAL HG13 H N N 395 VAL HG21 H N N 396 VAL HG22 H N N 397 VAL HG23 H N N 398 VAL HXT H N N 399 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SF4 FE1 S2 sing N N 290 SF4 FE1 S3 sing N N 291 SF4 FE1 S4 sing N N 292 SF4 FE2 S1 sing N N 293 SF4 FE2 S3 sing N N 294 SF4 FE2 S4 sing N N 295 SF4 FE3 S1 sing N N 296 SF4 FE3 S2 sing N N 297 SF4 FE3 S4 sing N N 298 SF4 FE4 S1 sing N N 299 SF4 FE4 S2 sing N N 300 SF4 FE4 S3 sing N N 301 THR N CA sing N N 302 THR N H sing N N 303 THR N H2 sing N N 304 THR CA C sing N N 305 THR CA CB sing N N 306 THR CA HA sing N N 307 THR C O doub N N 308 THR C OXT sing N N 309 THR CB OG1 sing N N 310 THR CB CG2 sing N N 311 THR CB HB sing N N 312 THR OG1 HG1 sing N N 313 THR CG2 HG21 sing N N 314 THR CG2 HG22 sing N N 315 THR CG2 HG23 sing N N 316 THR OXT HXT sing N N 317 TRP N CA sing N N 318 TRP N H sing N N 319 TRP N H2 sing N N 320 TRP CA C sing N N 321 TRP CA CB sing N N 322 TRP CA HA sing N N 323 TRP C O doub N N 324 TRP C OXT sing N N 325 TRP CB CG sing N N 326 TRP CB HB2 sing N N 327 TRP CB HB3 sing N N 328 TRP CG CD1 doub Y N 329 TRP CG CD2 sing Y N 330 TRP CD1 NE1 sing Y N 331 TRP CD1 HD1 sing N N 332 TRP CD2 CE2 doub Y N 333 TRP CD2 CE3 sing Y N 334 TRP NE1 CE2 sing Y N 335 TRP NE1 HE1 sing N N 336 TRP CE2 CZ2 sing Y N 337 TRP CE3 CZ3 doub Y N 338 TRP CE3 HE3 sing N N 339 TRP CZ2 CH2 doub Y N 340 TRP CZ2 HZ2 sing N N 341 TRP CZ3 CH2 sing Y N 342 TRP CZ3 HZ3 sing N N 343 TRP CH2 HH2 sing N N 344 TRP OXT HXT sing N N 345 TYR N CA sing N N 346 TYR N H sing N N 347 TYR N H2 sing N N 348 TYR CA C sing N N 349 TYR CA CB sing N N 350 TYR CA HA sing N N 351 TYR C O doub N N 352 TYR C OXT sing N N 353 TYR CB CG sing N N 354 TYR CB HB2 sing N N 355 TYR CB HB3 sing N N 356 TYR CG CD1 doub Y N 357 TYR CG CD2 sing Y N 358 TYR CD1 CE1 sing Y N 359 TYR CD1 HD1 sing N N 360 TYR CD2 CE2 doub Y N 361 TYR CD2 HD2 sing N N 362 TYR CE1 CZ doub Y N 363 TYR CE1 HE1 sing N N 364 TYR CE2 CZ sing Y N 365 TYR CE2 HE2 sing N N 366 TYR CZ OH sing N N 367 TYR OH HH sing N N 368 TYR OXT HXT sing N N 369 VAL N CA sing N N 370 VAL N H sing N N 371 VAL N H2 sing N N 372 VAL CA C sing N N 373 VAL CA CB sing N N 374 VAL CA HA sing N N 375 VAL C O doub N N 376 VAL C OXT sing N N 377 VAL CB CG1 sing N N 378 VAL CB CG2 sing N N 379 VAL CB HB sing N N 380 VAL CG1 HG11 sing N N 381 VAL CG1 HG12 sing N N 382 VAL CG1 HG13 sing N N 383 VAL CG2 HG21 sing N N 384 VAL CG2 HG22 sing N N 385 VAL CG2 HG23 sing N N 386 VAL OXT HXT sing N N 387 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IRON/SULFUR CLUSTER' SF4 3 'FE (III) ION' FE 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3LGB _pdbx_initial_refinement_model.details 'PDB ENTRY 3LGB' #