HEADER HYDROLASE 22-DEC-10 3Q3X TITLE CRYSTAL STRUCTURE OF THE MAIN PROTEASE (3C) FROM HUMAN ENTEROVIRUS B TITLE 2 EV93 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEVB EV93 3C PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.22.28; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS B; SOURCE 3 ORGANISM_TAXID: 138949; SOURCE 4 GENE: 3C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS CYSTEINE TRYPSIN-LIKE PROTEASE, 3C CYSTEINE PROTEASE (PICORNAIN 3C), KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.COSTENARO,M.SOLA,B.COUTARD,H.NORDER,B.CANARD,M.COLL REVDAT 4 06-DEC-23 3Q3X 1 REMARK REVDAT 3 13-SEP-23 3Q3X 1 REMARK SEQADV LINK REVDAT 2 05-OCT-11 3Q3X 1 JRNL REVDAT 1 07-SEP-11 3Q3X 0 JRNL AUTH L.COSTENARO,Z.KACZMARSKA,C.ARNAN,R.JANOWSKI,B.COUTARD, JRNL AUTH 2 M.SOLA,A.E.GORBALENYA,H.NORDER,B.CANARD,M.COLL JRNL TITL STRUCTURAL BASIS FOR ANTIVIRAL INHIBITION OF THE MAIN JRNL TITL 2 PROTEASE, 3C, FROM HUMAN ENTEROVIRUS 93. JRNL REF J.VIROL. V. 85 10764 2011 JRNL REFN ISSN 0022-538X JRNL PMID 21835784 JRNL DOI 10.1128/JVI.05062-11 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 26318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1871 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1760 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2847 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 339 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3158 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2940 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4294 ; 1.401 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6863 ;10.405 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 419 ; 5.991 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;31.702 ;23.399 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 573 ;14.083 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.750 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 461 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3550 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 672 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1889 ; 0.744 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 788 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3064 ; 1.369 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1269 ; 2.171 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1200 ; 3.518 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 3Q3X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063162. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.872600 REMARK 200 MONOCHROMATOR : HORIZONTALLY SIDE DIFFRACTING REMARK 200 SILICON 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26356 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 66.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : 0.12700 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : 0.41200 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3 REMARK 200 STARTING MODEL: PDB ENTRY 1L1N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 8K, 0.1M CACODYLATE, 0.2M REMARK 280 MAGNESIUM ACETATE, CRYO + 20% GLYCEROL, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.60800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 182 REMARK 465 GLN A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 GLU B 181 REMARK 465 GLU B 182 REMARK 465 GLN B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 -122.03 46.93 REMARK 500 ASP B 32 -121.89 52.08 REMARK 500 LYS B 42 60.02 38.06 REMARK 500 ASN B 111 66.86 38.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 191 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 99 OE2 REMARK 620 2 HOH B 199 O 107.2 REMARK 620 3 HOH B 205 O 78.4 167.1 REMARK 620 4 HOH B 207 O 165.4 87.0 87.0 REMARK 620 5 HOH B 323 O 96.2 86.2 81.5 81.3 REMARK 620 6 HOH B 344 O 81.8 97.0 95.3 100.0 176.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 190 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 241 O REMARK 620 2 HOH B 242 O 94.2 REMARK 620 3 HOH B 243 O 87.7 87.4 REMARK 620 4 HOH B 256 O 92.9 87.0 174.5 REMARK 620 5 HOH B 258 O 82.5 176.7 91.9 93.6 REMARK 620 6 HOH B 265 O 176.0 86.4 88.4 91.0 96.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 194 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q3Y RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THIS MAY BE A NATURAL VARIANT. DBREF 3Q3X A 1 183 UNP Q5DSM6 Q5DSM6_9ENTO 1556 1738 DBREF 3Q3X B 1 183 UNP Q5DSM6 Q5DSM6_9ENTO 1556 1738 SEQADV 3Q3X MET A -1 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X LYS A 0 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X VAL A 137 UNP Q5DSM6 MET 1692 SEE REMARK 999 SEQADV 3Q3X HIS A 184 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS A 185 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS A 186 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS A 187 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS A 188 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS A 189 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X MET B -1 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X LYS B 0 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X VAL B 137 UNP Q5DSM6 MET 1692 SEE REMARK 999 SEQADV 3Q3X HIS B 184 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS B 185 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS B 186 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS B 187 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS B 188 UNP Q5DSM6 EXPRESSION TAG SEQADV 3Q3X HIS B 189 UNP Q5DSM6 EXPRESSION TAG SEQRES 1 A 191 MET LYS GLY PRO ALA PHE GLU PHE ALA VAL ALA MET MET SEQRES 2 A 191 LYS ARG ASN ALA SER THR VAL LYS THR GLU TYR GLY GLU SEQRES 3 A 191 PHE THR MET LEU GLY ILE TYR ASP ARG TRP ALA VAL LEU SEQRES 4 A 191 PRO ARG HIS ALA LYS PRO GLY PRO THR ILE LEU MET ASN SEQRES 5 A 191 ASP GLN GLU VAL GLY VAL LEU ASP ALA LYS GLU LEU VAL SEQRES 6 A 191 ASP LYS ASP GLY THR ASN LEU GLU LEU THR LEU LEU LYS SEQRES 7 A 191 LEU ASN ARG ASN GLU LYS PHE ARG ASP ILE ARG GLY PHE SEQRES 8 A 191 LEU ALA ARG GLU GLU VAL GLU VAL ASN GLU ALA VAL LEU SEQRES 9 A 191 ALA ILE ASN THR SER LYS PHE PRO ASN MET TYR ILE PRO SEQRES 10 A 191 VAL GLY GLN VAL THR ASP TYR GLY PHE LEU ASN LEU GLY SEQRES 11 A 191 GLY THR PRO THR LYS ARG MET LEU VAL TYR ASN PHE PRO SEQRES 12 A 191 THR ARG ALA GLY GLN OCS GLY GLY VAL LEU MET SER THR SEQRES 13 A 191 GLY LYS VAL LEU GLY ILE HIS VAL GLY GLY ASN GLY HIS SEQRES 14 A 191 GLN GLY PHE SER ALA ALA LEU LEU ARG HIS TYR PHE ASN SEQRES 15 A 191 GLU GLU GLN HIS HIS HIS HIS HIS HIS SEQRES 1 B 191 MET LYS GLY PRO ALA PHE GLU PHE ALA VAL ALA MET MET SEQRES 2 B 191 LYS ARG ASN ALA SER THR VAL LYS THR GLU TYR GLY GLU SEQRES 3 B 191 PHE THR MET LEU GLY ILE TYR ASP ARG TRP ALA VAL LEU SEQRES 4 B 191 PRO ARG HIS ALA LYS PRO GLY PRO THR ILE LEU MET ASN SEQRES 5 B 191 ASP GLN GLU VAL GLY VAL LEU ASP ALA LYS GLU LEU VAL SEQRES 6 B 191 ASP LYS ASP GLY THR ASN LEU GLU LEU THR LEU LEU LYS SEQRES 7 B 191 LEU ASN ARG ASN GLU LYS PHE ARG ASP ILE ARG GLY PHE SEQRES 8 B 191 LEU ALA ARG GLU GLU VAL GLU VAL ASN GLU ALA VAL LEU SEQRES 9 B 191 ALA ILE ASN THR SER LYS PHE PRO ASN MET TYR ILE PRO SEQRES 10 B 191 VAL GLY GLN VAL THR ASP TYR GLY PHE LEU ASN LEU GLY SEQRES 11 B 191 GLY THR PRO THR LYS ARG MET LEU VAL TYR ASN PHE PRO SEQRES 12 B 191 THR ARG ALA GLY GLN OCS GLY GLY VAL LEU MET SER THR SEQRES 13 B 191 GLY LYS VAL LEU GLY ILE HIS VAL GLY GLY ASN GLY HIS SEQRES 14 B 191 GLN GLY PHE SER ALA ALA LEU LEU ARG HIS TYR PHE ASN SEQRES 15 B 191 GLU GLU GLN HIS HIS HIS HIS HIS HIS MODRES 3Q3X OCS A 147 CYS CYSTEINESULFONIC ACID MODRES 3Q3X OCS B 147 CYS CYSTEINESULFONIC ACID HET OCS A 147 9 HET OCS B 147 9 HET GOL A 190 6 HET GOL A 191 6 HET GOL A 192 6 HET MG B 190 1 HET MG B 191 1 HET GOL B 192 6 HET GOL B 193 6 HET GOL B 194 6 HETNAM OCS CYSTEINESULFONIC ACID HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 OCS 2(C3 H7 N O5 S) FORMUL 3 GOL 6(C3 H8 O3) FORMUL 6 MG 2(MG 2+) FORMUL 11 HOH *339(H2 O) HELIX 1 1 LYS A 0 ASN A 14 1 15 HELIX 2 2 HIS A 40 LYS A 42 5 3 HELIX 3 3 ILE A 86 LEU A 90 5 5 HELIX 4 4 LEU A 175 ASN A 180 5 6 HELIX 5 5 LYS B 0 ASN B 14 1 15 HELIX 6 6 HIS B 40 LYS B 42 5 3 HELIX 7 7 ILE B 86 LEU B 90 5 5 HELIX 8 8 LEU B 175 PHE B 179 5 5 SHEET 1 A 7 ALA A 15 THR A 20 0 SHEET 2 A 7 GLY A 23 TYR A 31 -1 O PHE A 25 N VAL A 18 SHEET 3 A 7 TRP A 34 PRO A 38 -1 O TRP A 34 N ILE A 30 SHEET 4 A 7 ASN A 69 LEU A 77 -1 O THR A 73 N LEU A 37 SHEET 5 A 7 GLN A 52 VAL A 63 -1 N LYS A 60 O LEU A 74 SHEET 6 A 7 THR A 46 MET A 49 -1 N ILE A 47 O VAL A 54 SHEET 7 A 7 ALA A 15 THR A 20 -1 N LYS A 19 O LEU A 48 SHEET 1 B 7 VAL A 97 ILE A 104 0 SHEET 2 B 7 MET A 112 LEU A 127 -1 O ILE A 114 N LEU A 102 SHEET 3 B 7 THR A 130 ASN A 139 -1 O VAL A 137 N THR A 120 SHEET 4 B 7 GLN A 168 ALA A 173 -1 O GLY A 169 N TYR A 138 SHEET 5 B 7 LYS A 156 ASN A 165 -1 N VAL A 162 O PHE A 170 SHEET 6 B 7 VAL A 150 SER A 153 -1 N SER A 153 O LYS A 156 SHEET 7 B 7 VAL A 97 ILE A 104 -1 N VAL A 101 O MET A 152 SHEET 1 C 7 ALA B 15 THR B 20 0 SHEET 2 C 7 GLY B 23 TYR B 31 -1 O PHE B 25 N VAL B 18 SHEET 3 C 7 TRP B 34 PRO B 38 -1 O TRP B 34 N ILE B 30 SHEET 4 C 7 ASN B 69 LEU B 77 -1 O THR B 73 N LEU B 37 SHEET 5 C 7 GLN B 52 VAL B 63 -1 N ASP B 58 O LYS B 76 SHEET 6 C 7 THR B 46 MET B 49 -1 N MET B 49 O GLN B 52 SHEET 7 C 7 ALA B 15 THR B 20 -1 N LYS B 19 O LEU B 48 SHEET 1 D 7 VAL B 97 ILE B 104 0 SHEET 2 D 7 MET B 112 LEU B 127 -1 O ILE B 114 N LEU B 102 SHEET 3 D 7 THR B 130 ASN B 139 -1 O THR B 132 N LEU B 125 SHEET 4 D 7 GLN B 168 ALA B 173 -1 O SER B 171 N LEU B 136 SHEET 5 D 7 LYS B 156 ASN B 165 -1 N VAL B 162 O PHE B 170 SHEET 6 D 7 VAL B 150 SER B 153 -1 N LEU B 151 O GLY B 159 SHEET 7 D 7 VAL B 97 ILE B 104 -1 N ALA B 103 O VAL B 150 LINK C GLN A 146 N OCS A 147 1555 1555 1.34 LINK C OCS A 147 N GLY A 148 1555 1555 1.33 LINK C GLN B 146 N OCS B 147 1555 1555 1.33 LINK C OCS B 147 N GLY B 148 1555 1555 1.32 LINK OE2 GLU B 99 MG MG B 191 1555 1555 2.20 LINK MG MG B 190 O HOH B 241 1555 1555 2.22 LINK MG MG B 190 O HOH B 242 1555 1555 2.11 LINK MG MG B 190 O HOH B 243 1555 1555 2.24 LINK MG MG B 190 O HOH B 256 1555 1555 2.07 LINK MG MG B 190 O HOH B 258 1555 1555 2.10 LINK MG MG B 190 O HOH B 265 1555 1555 1.98 LINK MG MG B 191 O HOH B 199 1555 1555 2.06 LINK MG MG B 191 O HOH B 205 1555 1555 2.42 LINK MG MG B 191 O HOH B 207 1555 1555 2.36 LINK MG MG B 191 O HOH B 323 1555 1555 2.21 LINK MG MG B 191 O HOH B 344 1555 1555 2.09 SITE 1 AC1 8 MET A 49 ASN A 50 ARG A 79 LYS A 133 SITE 2 AC1 8 GOL A 192 HOH A 203 HOH A 278 HOH A 340 SITE 1 AC2 9 TYR A 31 TRP A 34 LYS A 60 LEU A 74 SITE 2 AC2 9 TYR A 178 PHE A 179 ASN A 180 GLU A 181 SITE 3 AC2 9 HOH A 280 SITE 1 AC3 10 ARG A 13 ASN A 14 ALA A 15 ASN A 50 SITE 2 AC3 10 PHE A 83 LYS A 133 GOL A 190 HOH A 232 SITE 3 AC3 10 HOH A 258 HOH A 314 SITE 1 AC4 6 HOH B 241 HOH B 242 HOH B 243 HOH B 256 SITE 2 AC4 6 HOH B 258 HOH B 265 SITE 1 AC5 6 GLU B 99 HOH B 199 HOH B 205 HOH B 207 SITE 2 AC5 6 HOH B 323 HOH B 344 SITE 1 AC6 9 MET B 49 ASN B 50 VAL B 54 ASP B 66 SITE 2 AC6 9 ARG B 79 LYS B 133 HOH B 309 HOH B 317 SITE 3 AC6 9 HOH B 320 SITE 1 AC7 6 LYS B 19 THR B 20 GLU B 21 THR B 46 SITE 2 AC7 6 LEU B 48 HOH B 337 SITE 1 AC8 6 TYR B 31 TRP B 34 LEU B 74 TYR B 178 SITE 2 AC8 6 PHE B 179 ASN B 180 CRYST1 39.072 65.216 66.355 90.00 90.67 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025594 0.000000 0.000301 0.00000 SCALE2 0.000000 0.015334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015072 0.00000