data_3Q5D # _entry.id 3Q5D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3Q5D RCSB RCSB063214 WWPDB D_1000063214 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3Q5E _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q5D _pdbx_database_status.recvd_initial_deposition_date 2010-12-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Byrnes, L.J.' 1 'Sondermann, H.' 2 # _citation.id primary _citation.title 'Structural basis for the nucleotide-dependent dimerization of the large G protein atlastin-1/SPG3A.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 2216 _citation.page_last 2221 _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21220294 _citation.pdbx_database_id_DOI 10.1073/pnas.1012792108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Byrnes, L.J.' 1 primary 'Sondermann, H.' 2 # _cell.entry_id 3Q5D _cell.length_a 145.353 _cell.length_b 145.353 _cell.length_c 104.168 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q5D _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Atlastin-1 51787.055 1 3.6.5.- ? 'G and middle domain, UNP residues 1-447' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Brain-specific GTP-binding protein, GTP-binding protein 3, GBP-3, hGBP3, Guanine nucleotide-binding protein 3, Spastic paraplegia 3 protein A ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)AKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAF RKGKSFL(MSE)DF(MSE)LRY(MSE)YNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLL (MSE)DTQGTFDSQSTLRDSATVFALST(MSE)ISSIQVYNLSQNVQEDDLQHLQLFTEYGRLA(MSE)EETFLKPFQSL IFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDE FIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIKIYQGEELPHPKS(MSE)LQATAEANNLAAVATAKDTYN KK(MSE)EEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGVKK(MSE)GGEEFSRRYLQQLESEIDELYIQYIKHNDSKN IFHAART ; _entity_poly.pdbx_seq_one_letter_code_can ;MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK SFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDS ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRL KVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKI TCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVK LFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAART ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 LYS n 1 4 ASN n 1 5 ARG n 1 6 ARG n 1 7 ASP n 1 8 ARG n 1 9 ASN n 1 10 SER n 1 11 TRP n 1 12 GLY n 1 13 GLY n 1 14 PHE n 1 15 SER n 1 16 GLU n 1 17 LYS n 1 18 THR n 1 19 TYR n 1 20 GLU n 1 21 TRP n 1 22 SER n 1 23 SER n 1 24 GLU n 1 25 GLU n 1 26 GLU n 1 27 GLU n 1 28 PRO n 1 29 VAL n 1 30 LYS n 1 31 LYS n 1 32 ALA n 1 33 GLY n 1 34 PRO n 1 35 VAL n 1 36 GLN n 1 37 VAL n 1 38 LEU n 1 39 ILE n 1 40 VAL n 1 41 LYS n 1 42 ASP n 1 43 ASP n 1 44 HIS n 1 45 SER n 1 46 PHE n 1 47 GLU n 1 48 LEU n 1 49 ASP n 1 50 GLU n 1 51 THR n 1 52 ALA n 1 53 LEU n 1 54 ASN n 1 55 ARG n 1 56 ILE n 1 57 LEU n 1 58 LEU n 1 59 SER n 1 60 GLU n 1 61 ALA n 1 62 VAL n 1 63 ARG n 1 64 ASP n 1 65 LYS n 1 66 GLU n 1 67 VAL n 1 68 VAL n 1 69 ALA n 1 70 VAL n 1 71 SER n 1 72 VAL n 1 73 ALA n 1 74 GLY n 1 75 ALA n 1 76 PHE n 1 77 ARG n 1 78 LYS n 1 79 GLY n 1 80 LYS n 1 81 SER n 1 82 PHE n 1 83 LEU n 1 84 MSE n 1 85 ASP n 1 86 PHE n 1 87 MSE n 1 88 LEU n 1 89 ARG n 1 90 TYR n 1 91 MSE n 1 92 TYR n 1 93 ASN n 1 94 GLN n 1 95 GLU n 1 96 SER n 1 97 VAL n 1 98 ASP n 1 99 TRP n 1 100 VAL n 1 101 GLY n 1 102 ASP n 1 103 TYR n 1 104 ASN n 1 105 GLU n 1 106 PRO n 1 107 LEU n 1 108 THR n 1 109 GLY n 1 110 PHE n 1 111 SER n 1 112 TRP n 1 113 ARG n 1 114 GLY n 1 115 GLY n 1 116 SER n 1 117 GLU n 1 118 ARG n 1 119 GLU n 1 120 THR n 1 121 THR n 1 122 GLY n 1 123 ILE n 1 124 GLN n 1 125 ILE n 1 126 TRP n 1 127 SER n 1 128 GLU n 1 129 ILE n 1 130 PHE n 1 131 LEU n 1 132 ILE n 1 133 ASN n 1 134 LYS n 1 135 PRO n 1 136 ASP n 1 137 GLY n 1 138 LYS n 1 139 LYS n 1 140 VAL n 1 141 ALA n 1 142 VAL n 1 143 LEU n 1 144 LEU n 1 145 MSE n 1 146 ASP n 1 147 THR n 1 148 GLN n 1 149 GLY n 1 150 THR n 1 151 PHE n 1 152 ASP n 1 153 SER n 1 154 GLN n 1 155 SER n 1 156 THR n 1 157 LEU n 1 158 ARG n 1 159 ASP n 1 160 SER n 1 161 ALA n 1 162 THR n 1 163 VAL n 1 164 PHE n 1 165 ALA n 1 166 LEU n 1 167 SER n 1 168 THR n 1 169 MSE n 1 170 ILE n 1 171 SER n 1 172 SER n 1 173 ILE n 1 174 GLN n 1 175 VAL n 1 176 TYR n 1 177 ASN n 1 178 LEU n 1 179 SER n 1 180 GLN n 1 181 ASN n 1 182 VAL n 1 183 GLN n 1 184 GLU n 1 185 ASP n 1 186 ASP n 1 187 LEU n 1 188 GLN n 1 189 HIS n 1 190 LEU n 1 191 GLN n 1 192 LEU n 1 193 PHE n 1 194 THR n 1 195 GLU n 1 196 TYR n 1 197 GLY n 1 198 ARG n 1 199 LEU n 1 200 ALA n 1 201 MSE n 1 202 GLU n 1 203 GLU n 1 204 THR n 1 205 PHE n 1 206 LEU n 1 207 LYS n 1 208 PRO n 1 209 PHE n 1 210 GLN n 1 211 SER n 1 212 LEU n 1 213 ILE n 1 214 PHE n 1 215 LEU n 1 216 VAL n 1 217 ARG n 1 218 ASP n 1 219 TRP n 1 220 SER n 1 221 PHE n 1 222 PRO n 1 223 TYR n 1 224 GLU n 1 225 PHE n 1 226 SER n 1 227 TYR n 1 228 GLY n 1 229 ALA n 1 230 ASP n 1 231 GLY n 1 232 GLY n 1 233 ALA n 1 234 LYS n 1 235 PHE n 1 236 LEU n 1 237 GLU n 1 238 LYS n 1 239 ARG n 1 240 LEU n 1 241 LYS n 1 242 VAL n 1 243 SER n 1 244 GLY n 1 245 ASN n 1 246 GLN n 1 247 HIS n 1 248 GLU n 1 249 GLU n 1 250 LEU n 1 251 GLN n 1 252 ASN n 1 253 VAL n 1 254 ARG n 1 255 LYS n 1 256 HIS n 1 257 ILE n 1 258 HIS n 1 259 SER n 1 260 CYS n 1 261 PHE n 1 262 THR n 1 263 ASN n 1 264 ILE n 1 265 SER n 1 266 CYS n 1 267 PHE n 1 268 LEU n 1 269 LEU n 1 270 PRO n 1 271 HIS n 1 272 PRO n 1 273 GLY n 1 274 LEU n 1 275 LYS n 1 276 VAL n 1 277 ALA n 1 278 THR n 1 279 ASN n 1 280 PRO n 1 281 ASN n 1 282 PHE n 1 283 ASP n 1 284 GLY n 1 285 LYS n 1 286 LEU n 1 287 LYS n 1 288 GLU n 1 289 ILE n 1 290 ASP n 1 291 ASP n 1 292 GLU n 1 293 PHE n 1 294 ILE n 1 295 LYS n 1 296 ASN n 1 297 LEU n 1 298 LYS n 1 299 ILE n 1 300 LEU n 1 301 ILE n 1 302 PRO n 1 303 TRP n 1 304 LEU n 1 305 LEU n 1 306 SER n 1 307 PRO n 1 308 GLU n 1 309 SER n 1 310 LEU n 1 311 ASP n 1 312 ILE n 1 313 LYS n 1 314 GLU n 1 315 ILE n 1 316 ASN n 1 317 GLY n 1 318 ASN n 1 319 LYS n 1 320 ILE n 1 321 THR n 1 322 CYS n 1 323 ARG n 1 324 GLY n 1 325 LEU n 1 326 VAL n 1 327 GLU n 1 328 TYR n 1 329 PHE n 1 330 LYS n 1 331 ALA n 1 332 TYR n 1 333 ILE n 1 334 LYS n 1 335 ILE n 1 336 TYR n 1 337 GLN n 1 338 GLY n 1 339 GLU n 1 340 GLU n 1 341 LEU n 1 342 PRO n 1 343 HIS n 1 344 PRO n 1 345 LYS n 1 346 SER n 1 347 MSE n 1 348 LEU n 1 349 GLN n 1 350 ALA n 1 351 THR n 1 352 ALA n 1 353 GLU n 1 354 ALA n 1 355 ASN n 1 356 ASN n 1 357 LEU n 1 358 ALA n 1 359 ALA n 1 360 VAL n 1 361 ALA n 1 362 THR n 1 363 ALA n 1 364 LYS n 1 365 ASP n 1 366 THR n 1 367 TYR n 1 368 ASN n 1 369 LYS n 1 370 LYS n 1 371 MSE n 1 372 GLU n 1 373 GLU n 1 374 ILE n 1 375 CYS n 1 376 GLY n 1 377 GLY n 1 378 ASP n 1 379 LYS n 1 380 PRO n 1 381 PHE n 1 382 LEU n 1 383 ALA n 1 384 PRO n 1 385 ASN n 1 386 ASP n 1 387 LEU n 1 388 GLN n 1 389 THR n 1 390 LYS n 1 391 HIS n 1 392 LEU n 1 393 GLN n 1 394 LEU n 1 395 LYS n 1 396 GLU n 1 397 GLU n 1 398 SER n 1 399 VAL n 1 400 LYS n 1 401 LEU n 1 402 PHE n 1 403 ARG n 1 404 GLY n 1 405 VAL n 1 406 LYS n 1 407 LYS n 1 408 MSE n 1 409 GLY n 1 410 GLY n 1 411 GLU n 1 412 GLU n 1 413 PHE n 1 414 SER n 1 415 ARG n 1 416 ARG n 1 417 TYR n 1 418 LEU n 1 419 GLN n 1 420 GLN n 1 421 LEU n 1 422 GLU n 1 423 SER n 1 424 GLU n 1 425 ILE n 1 426 ASP n 1 427 GLU n 1 428 LEU n 1 429 TYR n 1 430 ILE n 1 431 GLN n 1 432 TYR n 1 433 ILE n 1 434 LYS n 1 435 HIS n 1 436 ASN n 1 437 ASP n 1 438 SER n 1 439 LYS n 1 440 ASN n 1 441 ILE n 1 442 PHE n 1 443 HIS n 1 444 ALA n 1 445 ALA n 1 446 ARG n 1 447 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ATL1, atlastin-1 (residues 1-447), GBP3, SPG3A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ATLA1_HUMAN _struct_ref.pdbx_db_accession Q8WXF7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK SFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDS ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRL KVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKI TCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVK LFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAART ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q5D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 447 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8WXF7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 447 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 447 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3Q5D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.07 _exptl_crystal.density_percent_sol 59.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1 M Bicine pH 8.5, 30% PEG-MME550, 0.1 M succinic acid pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2010-06-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Si111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.987 # _reflns.entry_id 3Q5D _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.7 _reflns.number_obs 33815 _reflns.number_all 33815 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3Q5D _refine.ls_number_reflns_obs 31518 _refine.ls_number_reflns_all 31518 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.127 _refine.ls_d_res_high 2.699 _refine.ls_percent_reflns_obs 93.08 _refine.ls_R_factor_obs 0.1938 _refine.ls_R_factor_all 0.1938 _refine.ls_R_factor_R_work 0.1877 _refine.ls_R_factor_R_free 0.2495 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.01 _refine.ls_number_reflns_R_free 3154 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 4.1768 _refine.aniso_B[2][2] 4.1768 _refine.aniso_B[3][3] -8.3536 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.331 _refine.solvent_model_param_bsol 60.439 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.38 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3289 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 3323 _refine_hist.d_res_high 2.699 _refine_hist.d_res_low 48.127 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 3387 'X-RAY DIFFRACTION' ? f_angle_d 1.254 ? ? 4576 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.433 ? ? 1269 'X-RAY DIFFRACTION' ? f_chiral_restr 0.090 ? ? 499 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 586 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.6991 2.7394 1037 0.3322 78.00 0.4650 . . 116 . . . . 'X-RAY DIFFRACTION' . 2.7394 2.7822 1087 0.3002 82.00 0.3876 . . 109 . . . . 'X-RAY DIFFRACTION' . 2.7822 2.8278 1078 0.2876 81.00 0.3944 . . 117 . . . . 'X-RAY DIFFRACTION' . 2.8278 2.8766 1095 0.2492 84.00 0.3132 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.8766 2.9289 1178 0.2343 89.00 0.2973 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.9289 2.9852 1176 0.2721 89.00 0.3127 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.9852 3.0461 1161 0.2393 89.00 0.3388 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.0461 3.1123 1192 0.2396 90.00 0.3626 . . 131 . . . . 'X-RAY DIFFRACTION' . 3.1123 3.1847 1219 0.2229 91.00 0.3495 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.1847 3.2644 1254 0.2089 93.00 0.2968 . . 131 . . . . 'X-RAY DIFFRACTION' . 3.2644 3.3526 1259 0.1864 96.00 0.2604 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.3526 3.4512 1258 0.2037 96.00 0.2640 . . 148 . . . . 'X-RAY DIFFRACTION' . 3.4512 3.5626 1274 0.1944 96.00 0.2311 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.5626 3.6899 1290 0.2008 97.00 0.3044 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.6899 3.8375 1298 0.1926 97.00 0.2205 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.8375 4.0121 1285 0.1731 98.00 0.2410 . . 148 . . . . 'X-RAY DIFFRACTION' . 4.0121 4.2235 1295 0.1727 98.00 0.2354 . . 138 . . . . 'X-RAY DIFFRACTION' . 4.2235 4.4880 1313 0.1451 99.00 0.2157 . . 146 . . . . 'X-RAY DIFFRACTION' . 4.4880 4.8342 1317 0.1433 99.00 0.2109 . . 150 . . . . 'X-RAY DIFFRACTION' . 4.8342 5.3201 1311 0.1630 99.00 0.1879 . . 142 . . . . 'X-RAY DIFFRACTION' . 5.3201 6.0886 1327 0.1768 99.00 0.2568 . . 141 . . . . 'X-RAY DIFFRACTION' . 6.0886 7.6660 1326 0.1829 100.00 0.2315 . . 148 . . . . 'X-RAY DIFFRACTION' . 7.6660 48.1347 1334 0.1900 100.00 0.2303 . . 145 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3Q5D _struct.title 'crystal structure of human Atlastin-1 (residues 1-447) bound to GDP, crystal form 1' _struct.pdbx_descriptor 'Atlastin-1 (E.C.3.6.5.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q5D _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'G protein, GTPase, GDP/GTP binding, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 49 ? LEU A 58 ? ASP A 49 LEU A 58 1 ? 10 HELX_P HELX_P2 2 GLY A 79 ? ASN A 93 ? GLY A 79 ASN A 93 1 ? 15 HELX_P HELX_P3 3 SER A 153 ? SER A 171 ? SER A 153 SER A 171 1 ? 19 HELX_P HELX_P4 4 GLN A 183 ? ALA A 200 ? GLN A 183 ALA A 200 1 ? 18 HELX_P HELX_P5 5 GLY A 228 ? VAL A 242 ? GLY A 228 VAL A 242 1 ? 15 HELX_P HELX_P6 6 ASN A 252 ? CYS A 260 ? ASN A 252 CYS A 260 1 ? 9 HELX_P HELX_P7 7 GLY A 273 ? ASN A 279 ? GLY A 273 ASN A 279 1 ? 7 HELX_P HELX_P8 8 LYS A 285 ? ILE A 289 ? LYS A 285 ILE A 289 5 ? 5 HELX_P HELX_P9 9 ASP A 290 ? SER A 306 ? ASP A 290 SER A 306 1 ? 17 HELX_P HELX_P10 10 THR A 321 ? GLU A 339 ? THR A 321 GLU A 339 1 ? 19 HELX_P HELX_P11 11 SER A 346 ? GLY A 376 ? SER A 346 GLY A 376 1 ? 31 HELX_P HELX_P12 12 ALA A 383 ? ARG A 403 ? ALA A 383 ARG A 403 1 ? 21 HELX_P HELX_P13 13 GLY A 410 ? SER A 438 ? GLY A 410 SER A 438 1 ? 29 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 83 C ? ? ? 1_555 A MSE 84 N ? ? A LEU 83 A MSE 84 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A MSE 84 C ? ? ? 1_555 A ASP 85 N ? ? A MSE 84 A ASP 85 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A PHE 86 C ? ? ? 1_555 A MSE 87 N ? ? A PHE 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 87 C ? ? ? 1_555 A LEU 88 N ? ? A MSE 87 A LEU 88 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A TYR 90 C ? ? ? 1_555 A MSE 91 N ? ? A TYR 90 A MSE 91 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 91 C ? ? ? 1_555 A TYR 92 N ? ? A MSE 91 A TYR 92 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale ? ? A LEU 144 C ? ? ? 1_555 A MSE 145 N ? ? A LEU 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A MSE 145 C ? ? ? 1_555 A ASP 146 N ? ? A MSE 145 A ASP 146 1_555 ? ? ? ? ? ? ? 1.322 ? covale9 covale ? ? A THR 168 C ? ? ? 1_555 A MSE 169 N ? ? A THR 168 A MSE 169 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 169 C ? ? ? 1_555 A ILE 170 N ? ? A MSE 169 A ILE 170 1_555 ? ? ? ? ? ? ? 1.326 ? covale11 covale ? ? A ALA 200 C ? ? ? 1_555 A MSE 201 N ? ? A ALA 200 A MSE 201 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A MSE 201 C ? ? ? 1_555 A GLU 202 N ? ? A MSE 201 A GLU 202 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? A SER 346 C ? ? ? 1_555 A MSE 347 N ? ? A SER 346 A MSE 347 1_555 ? ? ? ? ? ? ? 1.325 ? covale14 covale ? ? A MSE 347 C ? ? ? 1_555 A LEU 348 N ? ? A MSE 347 A LEU 348 1_555 ? ? ? ? ? ? ? 1.329 ? covale15 covale ? ? A LYS 370 C ? ? ? 1_555 A MSE 371 N ? ? A LYS 370 A MSE 371 1_555 ? ? ? ? ? ? ? 1.330 ? covale16 covale ? ? A MSE 371 C ? ? ? 1_555 A GLU 372 N ? ? A MSE 371 A GLU 372 1_555 ? ? ? ? ? ? ? 1.327 ? covale17 covale ? ? A LYS 407 C ? ? ? 1_555 A MSE 408 N ? ? A LYS 407 A MSE 408 1_555 ? ? ? ? ? ? ? 1.325 ? covale18 covale ? ? A MSE 408 C ? ? ? 1_555 A GLY 409 N ? ? A MSE 408 A GLY 409 1_555 ? ? ? ? ? ? ? 1.315 ? metalc1 metalc ? ? A SER 81 OG ? ? ? 1_555 C MG . MG ? ? A SER 81 A MG 448 1_555 ? ? ? ? ? ? ? 2.462 ? metalc2 metalc ? ? B GDP . O2B ? ? ? 1_555 C MG . MG ? ? A GDP 3850 A MG 448 1_555 ? ? ? ? ? ? ? 2.523 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 243 A . ? SER 243 A GLY 244 A ? GLY 244 A 1 -4.21 2 GLY 244 A . ? GLY 244 A ASN 245 A ? ASN 245 A 1 -0.66 3 GLN 246 A . ? GLN 246 A HIS 247 A ? HIS 247 A 1 1.61 4 GLY 376 A . ? GLY 376 A GLY 377 A ? GLY 377 A 1 7.60 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 8 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 46 ? LEU A 48 ? PHE A 46 LEU A 48 A 2 PRO A 34 ? VAL A 40 ? PRO A 34 VAL A 40 A 3 GLY A 122 ? TRP A 126 ? GLY A 122 TRP A 126 A 4 LYS A 139 ? GLN A 148 ? LYS A 139 GLN A 148 A 5 PHE A 130 ? ASN A 133 ? PHE A 130 ASN A 133 B 1 PHE A 46 ? LEU A 48 ? PHE A 46 LEU A 48 B 2 PRO A 34 ? VAL A 40 ? PRO A 34 VAL A 40 B 3 GLY A 122 ? TRP A 126 ? GLY A 122 TRP A 126 B 4 LYS A 139 ? GLN A 148 ? LYS A 139 GLN A 148 B 5 VAL A 67 ? GLY A 74 ? VAL A 67 GLY A 74 B 6 ILE A 173 ? LEU A 178 ? ILE A 173 LEU A 178 B 7 PHE A 209 ? TRP A 219 ? PHE A 209 TRP A 219 B 8 PHE A 261 ? PRO A 270 ? PHE A 261 PRO A 270 C 1 GLU A 314 ? ILE A 315 ? GLU A 314 ILE A 315 C 2 ASN A 318 ? LYS A 319 ? ASN A 318 LYS A 319 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 47 ? O GLU A 47 N ILE A 39 ? N ILE A 39 A 2 3 N VAL A 37 ? N VAL A 37 O ILE A 123 ? O ILE A 123 A 3 4 N GLN A 124 ? N GLN A 124 O ASP A 146 ? O ASP A 146 A 4 5 O VAL A 142 ? O VAL A 142 N PHE A 130 ? N PHE A 130 B 1 2 O GLU A 47 ? O GLU A 47 N ILE A 39 ? N ILE A 39 B 2 3 N VAL A 37 ? N VAL A 37 O ILE A 123 ? O ILE A 123 B 3 4 N GLN A 124 ? N GLN A 124 O ASP A 146 ? O ASP A 146 B 4 5 O LEU A 143 ? O LEU A 143 N VAL A 68 ? N VAL A 68 B 5 6 N SER A 71 ? N SER A 71 O VAL A 175 ? O VAL A 175 B 6 7 N LEU A 178 ? N LEU A 178 O ARG A 217 ? O ARG A 217 B 7 8 N PHE A 214 ? N PHE A 214 O SER A 265 ? O SER A 265 C 1 2 N ILE A 315 ? N ILE A 315 O ASN A 318 ? O ASN A 318 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE GDP A 3850' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG A 448' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ARG A 77 ? ARG A 77 . ? 1_555 ? 2 AC1 16 LYS A 78 ? LYS A 78 . ? 1_555 ? 3 AC1 16 GLY A 79 ? GLY A 79 . ? 1_555 ? 4 AC1 16 LYS A 80 ? LYS A 80 . ? 1_555 ? 5 AC1 16 SER A 81 ? SER A 81 . ? 1_555 ? 6 AC1 16 PHE A 82 ? PHE A 82 . ? 1_555 ? 7 AC1 16 GLN A 148 ? GLN A 148 . ? 1_555 ? 8 AC1 16 ARG A 217 ? ARG A 217 . ? 1_555 ? 9 AC1 16 ASP A 218 ? ASP A 218 . ? 1_555 ? 10 AC1 16 HIS A 271 ? HIS A 271 . ? 1_555 ? 11 AC1 16 PRO A 272 ? PRO A 272 . ? 1_555 ? 12 AC1 16 VAL A 276 ? VAL A 276 . ? 1_555 ? 13 AC1 16 ASN A 279 ? ASN A 279 . ? 1_555 ? 14 AC1 16 PRO A 280 ? PRO A 280 . ? 1_555 ? 15 AC1 16 MG C . ? MG A 448 . ? 1_555 ? 16 AC1 16 HOH D . ? HOH A 449 . ? 1_555 ? 17 AC2 3 SER A 81 ? SER A 81 . ? 1_555 ? 18 AC2 3 GLU A 117 ? GLU A 117 . ? 1_555 ? 19 AC2 3 GDP B . ? GDP A 3850 . ? 1_555 ? # _database_PDB_matrix.entry_id 3Q5D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3Q5D _atom_sites.fract_transf_matrix[1][1] 0.006880 _atom_sites.fract_transf_matrix[1][2] 0.003972 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007944 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009600 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 ARG 8 8 ? ? ? A . n A 1 9 ASN 9 9 ? ? ? A . n A 1 10 SER 10 10 ? ? ? A . n A 1 11 TRP 11 11 ? ? ? A . n A 1 12 GLY 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 PHE 14 14 ? ? ? A . n A 1 15 SER 15 15 ? ? ? A . n A 1 16 GLU 16 16 ? ? ? A . n A 1 17 LYS 17 17 ? ? ? A . n A 1 18 THR 18 18 ? ? ? A . n A 1 19 TYR 19 19 ? ? ? A . n A 1 20 GLU 20 20 ? ? ? A . n A 1 21 TRP 21 21 ? ? ? A . n A 1 22 SER 22 22 ? ? ? A . n A 1 23 SER 23 23 ? ? ? A . n A 1 24 GLU 24 24 ? ? ? A . n A 1 25 GLU 25 25 ? ? ? A . n A 1 26 GLU 26 26 ? ? ? A . n A 1 27 GLU 27 27 ? ? ? A . n A 1 28 PRO 28 28 ? ? ? A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS ALA A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 MSE 84 84 84 MSE MSE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 MSE 87 87 87 MSE MSE A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 MSE 91 91 91 MSE MSE A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 TRP 99 99 99 TRP TRP A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 TRP 112 112 112 TRP TRP A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 MSE 145 145 145 MSE MSE A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 MSE 169 169 169 MSE MSE A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 ASP 186 186 186 ASP ASP A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 GLN 188 188 188 GLN GLN A . n A 1 189 HIS 189 189 189 HIS HIS A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 GLN 191 191 191 GLN GLN A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 TYR 196 196 196 TYR TYR A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 MSE 201 201 201 MSE MSE A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 PHE 205 205 205 PHE PHE A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 GLN 210 210 210 GLN GLN A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 SER 220 220 220 SER SER A . n A 1 221 PHE 221 221 221 PHE PHE A . n A 1 222 PRO 222 222 222 PRO PRO A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 PHE 225 225 225 PHE PHE A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 TYR 227 227 227 TYR TYR A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 LYS 241 241 241 LYS LYS A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 GLN 246 246 246 GLN GLN A . n A 1 247 HIS 247 247 247 HIS ALA A . n A 1 248 GLU 248 248 248 GLU GLU A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 HIS 256 256 256 HIS HIS A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 HIS 258 258 258 HIS HIS A . n A 1 259 SER 259 259 259 SER SER A . n A 1 260 CYS 260 260 260 CYS CYS A . n A 1 261 PHE 261 261 261 PHE PHE A . n A 1 262 THR 262 262 262 THR THR A . n A 1 263 ASN 263 263 263 ASN ASN A . n A 1 264 ILE 264 264 264 ILE ILE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 CYS 266 266 266 CYS CYS A . n A 1 267 PHE 267 267 267 PHE PHE A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 PRO 270 270 270 PRO PRO A . n A 1 271 HIS 271 271 271 HIS HIS A . n A 1 272 PRO 272 272 272 PRO PRO A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 LEU 274 274 274 LEU LEU A . n A 1 275 LYS 275 275 275 LYS LYS A . n A 1 276 VAL 276 276 276 VAL VAL A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 THR 278 278 278 THR THR A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 PRO 280 280 280 PRO PRO A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 PHE 282 282 282 PHE PHE A . n A 1 283 ASP 283 283 283 ASP ASP A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 LYS 285 285 285 LYS LYS A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 LYS 287 287 287 LYS LYS A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ILE 289 289 289 ILE ILE A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 ASP 291 291 291 ASP ASP A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 PHE 293 293 293 PHE PHE A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 ASN 296 296 296 ASN ASN A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LYS 298 298 298 LYS LYS A . n A 1 299 ILE 299 299 299 ILE ILE A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 ILE 301 301 301 ILE ILE A . n A 1 302 PRO 302 302 302 PRO PRO A . n A 1 303 TRP 303 303 303 TRP TRP A . n A 1 304 LEU 304 304 304 LEU LEU A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 PRO 307 307 307 PRO PRO A . n A 1 308 GLU 308 308 308 GLU GLU A . n A 1 309 SER 309 309 309 SER SER A . n A 1 310 LEU 310 310 310 LEU LEU A . n A 1 311 ASP 311 311 311 ASP ASP A . n A 1 312 ILE 312 312 312 ILE ILE A . n A 1 313 LYS 313 313 313 LYS LYS A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 ILE 315 315 315 ILE ILE A . n A 1 316 ASN 316 316 316 ASN ASN A . n A 1 317 GLY 317 317 317 GLY GLY A . n A 1 318 ASN 318 318 318 ASN ASN A . n A 1 319 LYS 319 319 319 LYS LYS A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 THR 321 321 321 THR THR A . n A 1 322 CYS 322 322 322 CYS CYS A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 GLY 324 324 324 GLY GLY A . n A 1 325 LEU 325 325 325 LEU LEU A . n A 1 326 VAL 326 326 326 VAL VAL A . n A 1 327 GLU 327 327 327 GLU GLU A . n A 1 328 TYR 328 328 328 TYR TYR A . n A 1 329 PHE 329 329 329 PHE PHE A . n A 1 330 LYS 330 330 330 LYS LYS A . n A 1 331 ALA 331 331 331 ALA ALA A . n A 1 332 TYR 332 332 332 TYR TYR A . n A 1 333 ILE 333 333 333 ILE ILE A . n A 1 334 LYS 334 334 334 LYS LYS A . n A 1 335 ILE 335 335 335 ILE ILE A . n A 1 336 TYR 336 336 336 TYR TYR A . n A 1 337 GLN 337 337 337 GLN GLN A . n A 1 338 GLY 338 338 338 GLY GLY A . n A 1 339 GLU 339 339 339 GLU GLU A . n A 1 340 GLU 340 340 340 GLU GLU A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 PRO 342 342 342 PRO PRO A . n A 1 343 HIS 343 343 343 HIS HIS A . n A 1 344 PRO 344 344 344 PRO PRO A . n A 1 345 LYS 345 345 345 LYS LYS A . n A 1 346 SER 346 346 346 SER SER A . n A 1 347 MSE 347 347 347 MSE MSE A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 GLN 349 349 349 GLN GLN A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 THR 351 351 351 THR THR A . n A 1 352 ALA 352 352 352 ALA ALA A . n A 1 353 GLU 353 353 353 GLU GLU A . n A 1 354 ALA 354 354 354 ALA ALA A . n A 1 355 ASN 355 355 355 ASN ASN A . n A 1 356 ASN 356 356 356 ASN ASN A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 ALA 358 358 358 ALA ALA A . n A 1 359 ALA 359 359 359 ALA ALA A . n A 1 360 VAL 360 360 360 VAL VAL A . n A 1 361 ALA 361 361 361 ALA ALA A . n A 1 362 THR 362 362 362 THR THR A . n A 1 363 ALA 363 363 363 ALA ALA A . n A 1 364 LYS 364 364 364 LYS LYS A . n A 1 365 ASP 365 365 365 ASP ASP A . n A 1 366 THR 366 366 366 THR THR A . n A 1 367 TYR 367 367 367 TYR TYR A . n A 1 368 ASN 368 368 368 ASN ASN A . n A 1 369 LYS 369 369 369 LYS LYS A . n A 1 370 LYS 370 370 370 LYS LYS A . n A 1 371 MSE 371 371 371 MSE MSE A . n A 1 372 GLU 372 372 372 GLU GLU A . n A 1 373 GLU 373 373 373 GLU GLU A . n A 1 374 ILE 374 374 374 ILE ILE A . n A 1 375 CYS 375 375 375 CYS CYS A . n A 1 376 GLY 376 376 376 GLY GLY A . n A 1 377 GLY 377 377 377 GLY GLY A . n A 1 378 ASP 378 378 378 ASP ASP A . n A 1 379 LYS 379 379 379 LYS LYS A . n A 1 380 PRO 380 380 380 PRO PRO A . n A 1 381 PHE 381 381 381 PHE PHE A . n A 1 382 LEU 382 382 382 LEU LEU A . n A 1 383 ALA 383 383 383 ALA ALA A . n A 1 384 PRO 384 384 384 PRO PRO A . n A 1 385 ASN 385 385 385 ASN ASN A . n A 1 386 ASP 386 386 386 ASP ASP A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 GLN 388 388 388 GLN GLN A . n A 1 389 THR 389 389 389 THR THR A . n A 1 390 LYS 390 390 390 LYS LYS A . n A 1 391 HIS 391 391 391 HIS HIS A . n A 1 392 LEU 392 392 392 LEU LEU A . n A 1 393 GLN 393 393 393 GLN GLN A . n A 1 394 LEU 394 394 394 LEU LEU A . n A 1 395 LYS 395 395 395 LYS LYS A . n A 1 396 GLU 396 396 396 GLU GLU A . n A 1 397 GLU 397 397 397 GLU GLU A . n A 1 398 SER 398 398 398 SER SER A . n A 1 399 VAL 399 399 399 VAL VAL A . n A 1 400 LYS 400 400 400 LYS LYS A . n A 1 401 LEU 401 401 401 LEU LEU A . n A 1 402 PHE 402 402 402 PHE PHE A . n A 1 403 ARG 403 403 403 ARG ARG A . n A 1 404 GLY 404 404 404 GLY GLY A . n A 1 405 VAL 405 405 405 VAL VAL A . n A 1 406 LYS 406 406 406 LYS LYS A . n A 1 407 LYS 407 407 407 LYS LYS A . n A 1 408 MSE 408 408 408 MSE MSE A . n A 1 409 GLY 409 409 409 GLY GLY A . n A 1 410 GLY 410 410 410 GLY GLY A . n A 1 411 GLU 411 411 411 GLU GLU A . n A 1 412 GLU 412 412 412 GLU GLU A . n A 1 413 PHE 413 413 413 PHE PHE A . n A 1 414 SER 414 414 414 SER SER A . n A 1 415 ARG 415 415 415 ARG ARG A . n A 1 416 ARG 416 416 416 ARG ARG A . n A 1 417 TYR 417 417 417 TYR TYR A . n A 1 418 LEU 418 418 418 LEU LEU A . n A 1 419 GLN 419 419 419 GLN GLN A . n A 1 420 GLN 420 420 420 GLN GLN A . n A 1 421 LEU 421 421 421 LEU LEU A . n A 1 422 GLU 422 422 422 GLU GLU A . n A 1 423 SER 423 423 423 SER SER A . n A 1 424 GLU 424 424 424 GLU GLU A . n A 1 425 ILE 425 425 425 ILE ILE A . n A 1 426 ASP 426 426 426 ASP ASP A . n A 1 427 GLU 427 427 427 GLU GLU A . n A 1 428 LEU 428 428 428 LEU LEU A . n A 1 429 TYR 429 429 429 TYR TYR A . n A 1 430 ILE 430 430 430 ILE ILE A . n A 1 431 GLN 431 431 431 GLN GLN A . n A 1 432 TYR 432 432 432 TYR TYR A . n A 1 433 ILE 433 433 433 ILE ILE A . n A 1 434 LYS 434 434 434 LYS LYS A . n A 1 435 HIS 435 435 435 HIS HIS A . n A 1 436 ASN 436 436 436 ASN ASN A . n A 1 437 ASP 437 437 437 ASP ASP A . n A 1 438 SER 438 438 438 SER SER A . n A 1 439 LYS 439 439 ? ? ? A . n A 1 440 ASN 440 440 ? ? ? A . n A 1 441 ILE 441 441 ? ? ? A . n A 1 442 PHE 442 442 ? ? ? A . n A 1 443 HIS 443 443 ? ? ? A . n A 1 444 ALA 444 444 ? ? ? A . n A 1 445 ALA 445 445 ? ? ? A . n A 1 446 ARG 446 446 ? ? ? A . n A 1 447 THR 447 447 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 3850 3850 GDP GDP A . C 3 MG 1 448 1 MG MG A . D 4 HOH 1 449 2 HOH HOH A . D 4 HOH 2 450 3 HOH HOH A . D 4 HOH 3 451 4 HOH HOH A . D 4 HOH 4 452 5 HOH HOH A . D 4 HOH 5 453 6 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 84 A MSE 84 ? MET SELENOMETHIONINE 2 A MSE 87 A MSE 87 ? MET SELENOMETHIONINE 3 A MSE 91 A MSE 91 ? MET SELENOMETHIONINE 4 A MSE 145 A MSE 145 ? MET SELENOMETHIONINE 5 A MSE 169 A MSE 169 ? MET SELENOMETHIONINE 6 A MSE 201 A MSE 201 ? MET SELENOMETHIONINE 7 A MSE 347 A MSE 347 ? MET SELENOMETHIONINE 8 A MSE 371 A MSE 371 ? MET SELENOMETHIONINE 9 A MSE 408 A MSE 408 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 7590 ? 2 MORE -60 ? 2 'SSA (A^2)' 35560 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z+2/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 69.4453333333 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OG _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id SER _pdbx_struct_conn_angle.ptnr1_label_seq_id 81 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id SER _pdbx_struct_conn_angle.ptnr1_auth_seq_id 81 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 448 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O2B _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id GDP _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id GDP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 3850 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 77.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_software.version' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 3.9367 42.5440 46.1842 0.2104 0.3139 0.2409 0.0720 0.0366 0.0377 1.3668 2.7615 1.7453 0.4859 0.5757 0.2147 0.1721 0.0743 0.2636 -0.1363 0.0657 0.3448 -0.0956 -0.5026 -0.1939 'X-RAY DIFFRACTION' 2 ? refined 14.2623 38.6792 50.0119 0.3492 0.3377 0.2384 -0.0246 -0.0610 -0.0276 1.8903 1.1563 1.1467 0.3850 -0.2629 -1.0332 0.2799 -0.4095 0.0318 0.5341 -0.0722 -0.0701 0.0387 -0.1355 -0.1743 'X-RAY DIFFRACTION' 3 ? refined 46.8770 66.9100 25.1272 0.7320 0.5413 0.2970 -0.4046 -0.0075 0.0157 0.9299 1.8666 3.5190 0.2279 -1.9225 -1.1656 0.1960 -0.4504 -0.0348 0.3752 -0.3492 0.0483 -0.8983 0.9013 0.0781 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(resid 29:199)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(resid 200:341)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(resid 342:438)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHENIX 'model building' . ? 2 SOLVE phasing . ? 3 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 PHENIX phasing . ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 98 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 101 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 97 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 97 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 VAL _pdbx_validate_rmsd_angle.auth_seq_id_3 97 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 89.76 _pdbx_validate_rmsd_angle.angle_target_value 111.40 _pdbx_validate_rmsd_angle.angle_deviation -21.64 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 31 ? ? -53.21 179.78 2 1 ASP A 43 ? ? -56.58 -1.25 3 1 VAL A 62 ? ? -142.25 -29.54 4 1 VAL A 97 ? ? 55.24 5.57 5 1 TRP A 99 ? ? -35.80 -38.63 6 1 TYR A 103 ? ? -39.41 -24.66 7 1 SER A 116 ? ? -68.92 84.66 8 1 SER A 153 ? ? 176.87 154.13 9 1 SER A 179 ? ? -90.29 -79.15 10 1 ALA A 200 ? ? -67.36 0.76 11 1 GLN A 210 ? ? -93.93 -94.86 12 1 GLU A 248 ? ? -137.90 -46.54 13 1 LEU A 250 ? ? -78.94 42.28 14 1 GLN A 251 ? ? -100.50 72.49 15 1 ASP A 283 ? ? -146.65 14.21 16 1 CYS A 375 ? ? -112.86 54.97 17 1 LYS A 379 ? ? 46.33 -122.63 18 1 PHE A 381 ? ? -36.35 127.66 19 1 PRO A 384 ? ? -39.08 -28.45 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 29 ? CG1 ? A VAL 29 CG1 2 1 Y 1 A VAL 29 ? CG2 ? A VAL 29 CG2 3 1 Y 1 A LYS 30 ? CG ? A LYS 30 CG 4 1 Y 1 A LYS 30 ? CD ? A LYS 30 CD 5 1 Y 1 A LYS 30 ? CE ? A LYS 30 CE 6 1 Y 1 A LYS 30 ? NZ ? A LYS 30 NZ 7 1 Y 1 A HIS 247 ? CG ? A HIS 247 CG 8 1 Y 1 A HIS 247 ? ND1 ? A HIS 247 ND1 9 1 Y 1 A HIS 247 ? CD2 ? A HIS 247 CD2 10 1 Y 1 A HIS 247 ? CE1 ? A HIS 247 CE1 11 1 Y 1 A HIS 247 ? NE2 ? A HIS 247 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A ARG 8 ? A ARG 8 9 1 Y 1 A ASN 9 ? A ASN 9 10 1 Y 1 A SER 10 ? A SER 10 11 1 Y 1 A TRP 11 ? A TRP 11 12 1 Y 1 A GLY 12 ? A GLY 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A PHE 14 ? A PHE 14 15 1 Y 1 A SER 15 ? A SER 15 16 1 Y 1 A GLU 16 ? A GLU 16 17 1 Y 1 A LYS 17 ? A LYS 17 18 1 Y 1 A THR 18 ? A THR 18 19 1 Y 1 A TYR 19 ? A TYR 19 20 1 Y 1 A GLU 20 ? A GLU 20 21 1 Y 1 A TRP 21 ? A TRP 21 22 1 Y 1 A SER 22 ? A SER 22 23 1 Y 1 A SER 23 ? A SER 23 24 1 Y 1 A GLU 24 ? A GLU 24 25 1 Y 1 A GLU 25 ? A GLU 25 26 1 Y 1 A GLU 26 ? A GLU 26 27 1 Y 1 A GLU 27 ? A GLU 27 28 1 Y 1 A PRO 28 ? A PRO 28 29 1 Y 1 A LYS 439 ? A LYS 439 30 1 Y 1 A ASN 440 ? A ASN 440 31 1 Y 1 A ILE 441 ? A ILE 441 32 1 Y 1 A PHE 442 ? A PHE 442 33 1 Y 1 A HIS 443 ? A HIS 443 34 1 Y 1 A ALA 444 ? A ALA 444 35 1 Y 1 A ALA 445 ? A ALA 445 36 1 Y 1 A ARG 446 ? A ARG 446 37 1 Y 1 A THR 447 ? A THR 447 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH #